RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 020079
(331 letters)
>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 334
Score = 141 bits (356), Expect = 5e-40
Identities = 109/219 (49%), Positives = 140/219 (63%), Gaps = 2/219 (0%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163
PGGID +T+L G + DDFF G AALAGGTTM ID V+P G SL FE + +
Sbjct: 1 PGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEA 60
Query: 164 AKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK 222
A SC DY H+ IT W + V +E+EV+V++KG+NSF+ +MAYK + ++D L E F
Sbjct: 61 ADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFT 120
Query: 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282
K LGA+ +VHAENGD + + QKR++E+GITGPEGHALSRP LE EA RAI +A +
Sbjct: 121 FLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRI 180
Query: 283 NTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSC 321
N P+Y+ VMS A + IA ARK GP I
Sbjct: 181 NCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGT 219
>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2
{Dictyostelium discoideum [TaxId: 44689]}
Length = 334
Score = 138 bits (348), Expect = 6e-39
Identities = 123/216 (56%), Positives = 151/216 (69%), Gaps = 2/216 (0%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163
PGGID HTH + FMG+ ++DDF G AA+AGGTT IDFVIP G SL ++ ++K
Sbjct: 1 PGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKW 60
Query: 164 A-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK 222
A + DY H+AIT W E VS EME++VKE+G+NSFK FMAYK SFM+ D+ + FK
Sbjct: 61 ADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNSFMVTDQEMYHIFK 120
Query: 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282
RCK LGA+A VHAENGD VFEGQK+M+E+GITGPEGH LSRP LE EAT RAI +A+ V
Sbjct: 121 RCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSV 180
Query: 283 NTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLC 318
TP+Y+VHV S+ A + I K RK G I
Sbjct: 181 CTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAG 216
>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId:
301298]}
Length = 332
Score = 131 bits (330), Expect = 2e-36
Identities = 98/215 (45%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA 164
GGIDPHTHL M F G+ T DDFF+G AA GGTT +DF + G SL + + +KA
Sbjct: 1 GGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCLTKKGESLKSAIATWHEKA 60
Query: 165 K-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
+ + +DYGFH+ I + ++ V +E+E ++ +GI S K FMAYK F +DE L + +
Sbjct: 61 RGKAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKVFMAYKNVFQADDETLFKTLVK 120
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
K LGAL VHAENGD + K+ + G T P HA +RPP EGEAT RAI L
Sbjct: 121 AKELGALVQVHAENGDVLDYLTKKALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALAG 180
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLC 318
+ LYVVHV A++ IA+AR+ G N T P
Sbjct: 181 SQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQY 215
>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii
[TaxId: 329]}
Length = 330
Score = 129 bits (325), Expect = 1e-35
Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 3/213 (1%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA 164
GGID HTH+ +++ D F + AA GGTT +DF G SL ++ A
Sbjct: 1 GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMA 60
Query: 165 K-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
S +DYG+H+ + + V +E+EV+ + GI SFK FMAY+G MI+D L++ +
Sbjct: 61 GGKSAIDYGYHIIVLDPTDSVIEELEVL-PDLGITSFKVFMAYRGMNMIDDVTLLKTLDK 119
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
G+L MVHAENGDA + + + G T P HALSRPP +E EAT RA+ LAE VN
Sbjct: 120 AVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVN 179
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIP 316
P+Y+VHV +++EE+ +A+ G L T
Sbjct: 180 APIYIVHVTCEESLEEVMRAKSRGVRALAETCT 212
>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2
{Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Length = 384
Score = 117 bits (292), Expect = 2e-30
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 106 GGIDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAG-------F 157
GGID H H+ + + +D +A+AGGTT + F
Sbjct: 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKL 60
Query: 158 EAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM-------VKEKGINSFKFFMAYKGSF 210
+ E + DYG H+ + + ++ + E++ + G++S K FM Y
Sbjct: 61 DVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYP-GL 119
Query: 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270
I+D ++ + G M+HAENGD V + + E G+T H +SRP ++EGE
Sbjct: 120 QISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGE 179
Query: 271 ATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIP 316
AT RAI LA ++TP+ VHV S A E I +A+ G T P
Sbjct: 180 ATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCP 225
>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId:
275]}
Length = 335
Score = 105 bits (261), Expect = 1e-26
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 3/205 (1%)
Query: 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK- 165
IDPH H+ + FM + D +G AAL GGTT +I+ P G++ ++ KA+
Sbjct: 2 IDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEG 61
Query: 166 NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225
NS DY FHMA++K+DE ++ +V GI+SFK F++YK F ++D + + + K
Sbjct: 62 NSYCDYTFHMAVSKFDEKTEGQLREIV-ADGISSFKIFLSYKNFFGVDDGEMYQTLRLAK 120
Query: 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285
LG + H EN + V Q++++ G TGPE H SRP +E E T R E
Sbjct: 121 ELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGAT 180
Query: 286 LYVVHVMSMDAMEEIAKARKAGPNF 310
YVVH+ A++ A+ G
Sbjct: 181 GYVVHLSCKPALDAAMAAKARGVPI 205
>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens
[TaxId: 43663]}
Length = 325
Score = 92.1 bits (227), Expect = 7e-22
Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 2/217 (0%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPI-NGSLTAGFEAYEKKA 164
G +D H H+ ++ F +A GG T I+ I + F +K+A
Sbjct: 1 GVVDEHVHI-IDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQA 59
Query: 165 KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRC 224
+ G S ++D L E F+
Sbjct: 60 GQRLKVDFALYGGGVPGNLPEIRKMHDAGAVGFKSMMAASVPGMFDAVSDGELFEIFQEI 119
Query: 225 KSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284
+ G++ +VHAEN + QK++ G + S+P E EA RA+ L +
Sbjct: 120 AACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGC 179
Query: 285 PLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSC 321
L V+HV + D +E I +A+ G + + P +
Sbjct: 180 RLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNI 216
>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex
aeolicus [TaxId: 63363]}
Length = 310
Score = 83.9 bits (206), Expect = 5e-19
Identities = 47/214 (21%), Positives = 74/214 (34%), Gaps = 12/214 (5%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDF--VIPINGSLTAGFEAYEKK 163
G ID H HL G +D SG A+AGG T + P + T +K
Sbjct: 1 GFIDIHVHLRD--PGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKS 58
Query: 164 AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
ITK + +KE G +F GS +++ ++ + +
Sbjct: 59 KSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFT----DDGSPVMDSSVMRKALEL 114
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
LG M H E+ + +I G SR P E R LA+
Sbjct: 115 ASQLGVPIMDHCED----DKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTG 170
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPL 317
+++ HV + ++E I ++ G P
Sbjct: 171 GHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPN 204
>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine
amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri)
[TaxId: 4934]}
Length = 156
Score = 63.5 bits (154), Expect = 6e-13
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFV---MPGGID 109
++IK G + A A++ V +G V + +I+ +V+DA G F+ +PG D
Sbjct: 3 YDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPILPGVSD 62
Query: 110 PHTHLAMEF 118
+
Sbjct: 63 ADLVIWYPD 71
>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase
{Escherichia coli [TaxId: 562]}
Length = 105
Score = 60.8 bits (147), Expect = 2e-12
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 13/110 (11%)
Query: 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGI 108
++ L++G + + I DV V +G ++AV NI + V+D +G+ + P +
Sbjct: 6 AAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPEIL 65
Query: 109 DPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFE 158
+ + I+ A G M V + FE
Sbjct: 66 PGNDADLLVMTPELRIEQ-------VYARGKLM----VKDGKACVKGTFE 104
>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine
amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId:
44689]}
Length = 150
Score = 61.2 bits (148), Expect = 4e-12
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 16/150 (10%)
Query: 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG-GIDP 110
+ ILIK GTVVN +DV VE+GI+ + NI + +KV+DAT K ++ G D
Sbjct: 1 TGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLIDVGCDG 60
Query: 111 HTHLAMEFMGSETIDD---------FFSGQAAALAGGTTMHIDFVIPINGSLT--AGFEA 159
+ D F G TT+ ++ + L+ G
Sbjct: 61 DIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGR 120
Query: 160 YEKKAKNSCMDYGFHMAITKWDEVVSDEME 189
+ + I + D+V ++ +
Sbjct: 121 FVPRPPFG----PVFDGIEQRDKVRNELLR 146
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein
EAJ56179 {Unidentified organism [TaxId: 32644]}
Length = 102
Score = 58.1 bits (140), Expect = 2e-11
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 53 SKILIKGGTVVNAHHQQI---ADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGID 109
+ L + G +++ H + ++ +EDG + V + V+D GK +MP +
Sbjct: 1 TTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPRIVP 60
Query: 110 PHTHLAMEFMG 120
+ G
Sbjct: 61 GAHADVLVVDG 71
>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related
protein-1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 142
Score = 58.7 bits (142), Expect = 2e-11
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG-GIDPHT 112
++LI+GG ++N ADVY+EDG++ + N+ V VK ++A G+ V+ G D
Sbjct: 2 RLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIIAVGSDADV 61
Query: 113 HL 114
+
Sbjct: 62 VI 63
>d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp.
[TaxId: 275]}
Length = 123
Score = 57.3 bits (138), Expect = 4e-11
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHL 114
+LIK G ++ A + AD+Y E + + N+ +V+DATGK+V PG
Sbjct: 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGADLVVYD- 60
Query: 115 AMEFMGSETIDDFFS 129
++ G+ ++
Sbjct: 61 -PQYRGTISVKTQHV 74
>d2vhla2 c.1.9.10 (A:58-358) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Bacillus subtilis
[TaxId: 1423]}
Length = 301
Score = 58.7 bits (140), Expect = 2e-10
Identities = 32/214 (14%), Positives = 54/214 (25%), Gaps = 15/214 (7%)
Query: 106 GGIDPHTHLAMEFMGSE-TIDDFFSGQAAALAGGTTMHIDFVI--PINGSLTAGFEAYEK 162
G ID H H + + + GTT + I A A E
Sbjct: 1 GMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREW 60
Query: 163 KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK 222
KA G + + ++ + K +D L + ++
Sbjct: 61 KAAEESSLLGAELLGIHLE------------GPFVSPKRAGAQPKEWIRPSDVELFKKWQ 108
Query: 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282
+ + A D FE + + + I GH + LL A A +
Sbjct: 109 QEAGGLIKIVTLAPEEDQHFELIRHLKDESIIASMGHTDADSALLSDAAKAGASHMTHLY 168
Query: 283 NTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIP 316
N H +A +
Sbjct: 169 NAMSPFHHREPGVIGTALAHDGFVTELIADGIHS 202
>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp.
AR9 [TaxId: 301298]}
Length = 127
Score = 54.6 bits (131), Expect = 4e-10
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTH 113
K I+GGTVV A ADV +E VVA+ ++V + +DATG +V+P +
Sbjct: 1 KKWIRGGTVVTAADTYQADVLIEGERVVAIGHQLSVNGA-EEIDATGCYVIPIAVGSDAD 59
Query: 114 LAMEFMG 120
+ +
Sbjct: 60 IVIFDPH 66
>d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase
{Alcaligenes faecalis [TaxId: 511]}
Length = 55
Score = 51.7 bits (124), Expect = 8e-10
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 55 ILIKGGTVVNAHHQQI--ADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMP 105
++ GGTV++ + ADV V + AV + +D GK V P
Sbjct: 4 YILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSP 55
>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE)
{Pseudomonas diminuta [TaxId: 293]}
Length = 331
Score = 53.6 bits (127), Expect = 1e-08
Identities = 26/218 (11%), Positives = 44/218 (20%), Gaps = 30/218 (13%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSG-------------QAAALAGGTTMHIDFVIPINGS 152
G H H+ G F G + A AG T+ I
Sbjct: 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRD 75
Query: 153 LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212
++ E + G + S E + I + +
Sbjct: 76 VSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIK 135
Query: 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272
+ L A A TG + +GE
Sbjct: 136 VATTGKATPFQELVLKAAARASLA-----------------TGVPVTTHTAASQRDGEQQ 178
Query: 273 TRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNF 310
+ + + H D + + G
Sbjct: 179 AAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLI 216
>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter
aurescens [TaxId: 43663]}
Length = 126
Score = 49.6 bits (118), Expect = 2e-08
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG---GIDPH 111
+++K +V++ AD+ V+DG V A+ + + + + +DA GKFVMP G D
Sbjct: 4 VIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPTLQVGSDAD 63
Query: 112 THLA-MEFMGSETIDDFFSGQAAALAGGTTMH 142
+ ++ F S + G +
Sbjct: 64 LLILDLDIDTKVDASQFRSLHKYSPFDGMPVT 95
>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 128
Score = 49.7 bits (118), Expect = 3e-08
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTH 113
+IK GT+V A A + ++DG + + N+ +V+DA G +V P +
Sbjct: 2 TKIIKNGTIVTATDTYEAHLLIKDGKIAMIGQNLE-EKGAEVIDAKGCYVFPIVVGSDAD 60
Query: 114 LAMEFMGSETI 124
L + E +
Sbjct: 61 LVIFDPNIERV 71
>d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase
{Alteromonas macleodii [TaxId: 28108]}
Length = 96
Score = 47.2 bits (112), Expect = 9e-08
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 53 SKILIKGGTVVNAHHQQI---ADVYVEDGIVVAVQPN-INVGDDVKVLDATGKFVMPGGI 108
SK LI G +++ Q+ + ++ I+ ++ I+ D +D V+P
Sbjct: 1 SKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGFISSNDFEDYIDLRDHTVLPSIE 60
Query: 109 DPHTHLAMEFMGSETID 125
+ G+ D
Sbjct: 61 SGKLADLIAVKGNPIED 77
>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease
{Klebsiella aerogenes [TaxId: 28451]}
Length = 181
Score = 48.7 bits (116), Expect = 1e-07
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 16/106 (15%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN----------VGDDVKVLDATGKFVM 104
+++ +V+ AD+ V+DG + A+ N +G +V+ A GK V
Sbjct: 67 LVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVT 126
Query: 105 PGGIDPHTH-----LAMEFMGSETIDDFFSGQ-AAALAGGTTMHID 144
G I+ + F G + G A A G I
Sbjct: 127 AGSIEVGKLADLVVWSPAFFGVKPATVIKGGMIAIAPMGDINASIP 172
>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia
pickettii [TaxId: 329]}
Length = 127
Score = 43.1 bits (101), Expect = 4e-06
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHL 114
I+IK GT+V A AD+ ++DG + + + + + +DA G++V P + +
Sbjct: 3 IIIKNGTIVTADGISRADLGIKDGKITQIGGALGPAE--RTIDAAGRYVFPIAVGSDADI 60
Query: 115 AM 116
+
Sbjct: 61 VL 62
>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate
deacetylase, NagA {Escherichia coli [TaxId: 562]}
Length = 85
Score = 38.9 bits (90), Expect = 6e-05
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTH 113
+ G + H V + DG++ +V P + +++ G + P
Sbjct: 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPTLAAGKVA 61
Query: 114 LAMEF-MGSETIDDFFSG 130
F + +G
Sbjct: 62 NLTAFTPDFKITKTIVNG 79
>d2vhla1 b.92.1.5 (A:3-57,A:359-394) N-acetylglucosamine-6-phosphate
deacetylase, NagA {Bacillus subtilis [TaxId: 1423]}
Length = 91
Score = 38.8 bits (90), Expect = 7e-05
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Query: 54 KILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPH 111
+LIK +V + + V + DG + V ++ ++P
Sbjct: 2 SLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPSVTVGK 61
Query: 112 THLAM 116
+
Sbjct: 62 DADLV 66
>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453
{Bifidobacterium longum [TaxId: 216816]}
Length = 118
Score = 39.4 bits (91), Expect = 9e-05
Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Query: 54 KILIKGGTVV----NAHHQQIADVYVE-DGIVVAV--QPNINVGDDVKVLDATGKFVMPG 106
+ T+V + + V DG + V ++ + LD TGK VM
Sbjct: 5 PFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMLE 64
Query: 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMH 142
L + + + AG
Sbjct: 65 VGKSADLLVLNANPLDDLRALEHPALVIAAGHPVWR 100
>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId:
562]}
Length = 343
Score = 36.9 bits (84), Expect = 0.002
Identities = 21/210 (10%), Positives = 44/210 (20%), Gaps = 25/210 (11%)
Query: 109 DPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDF--VIPINGSLTAGFEAYEKKAKN 166
D H HL M + + I + P + AY ++ +
Sbjct: 11 DWHLHLRDGDMLKTVV--------PYTSEIYGRAIVMPNLAPPVTT-VEAAVAYRQRILD 61
Query: 167 SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS 226
+ + S + + + F Y + N +
Sbjct: 62 AVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSVDAIMP 121
Query: 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286
L + + G+ + +
Sbjct: 122 --VLERMEKIGMPLLVHGEV---------THADIDIFDREARFIESVMEPLRQRLTALKV 170
Query: 287 YVVHVMSMDAMEEIAKARKAGPNFLNTTIP 316
H+ + DA + + R T P
Sbjct: 171 VFEHITTKDAADYV---RDGNERLAATITP 197
>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic
domain {Escherichia coli [TaxId: 562]}
Length = 284
Score = 35.9 bits (81), Expect = 0.005
Identities = 20/199 (10%), Positives = 44/199 (22%), Gaps = 14/199 (7%)
Query: 106 GGIDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA 164
G ID H HL T + G T + + + S + +A
Sbjct: 1 GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRA 60
Query: 165 KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRC 224
N + + + V I+ +
Sbjct: 61 LNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAPDVYHLANMA 120
Query: 225 KSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284
++ + G G + + + +++ + T
Sbjct: 121 AESRVGGLLGGKPG-------------VTVFHMGDSKKALQPIYDLLENCDVPISKLLPT 167
Query: 285 PLYVVHVMSMDAMEEIAKA 303
+ + A+E K
Sbjct: 168 HVNRNVPLFEQALEFARKG 186
>d1ueba3 b.40.4.5 (A:127-184) Elongation factor P middle and
C-terminal domains {Thermus thermophilus HB8 [TaxId:
300852]}
Length = 58
Score = 32.2 bits (74), Expect = 0.006
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFV 103
++G TV +E G VV V + G+ +KV TG++V
Sbjct: 13 VRGDTVSGG----SKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYV 55
>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase
{Aquifex aeolicus [TaxId: 63363]}
Length = 112
Score = 33.4 bits (76), Expect = 0.009
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 53 SKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGI 108
K+++K G V++ D+ VE+G + + NI + +++DA G V P
Sbjct: 2 LKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPTLK 58
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein
{Escherichia coli [TaxId: 562]}
Length = 291
Score = 33.0 bits (74), Expect = 0.046
Identities = 24/228 (10%), Positives = 58/228 (25%), Gaps = 25/228 (10%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAAL---------AGGTTMHIDFVIPINGSLTAG 156
G H HL ++ G + D Q A + G + + +
Sbjct: 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFM 65
Query: 157 FEAYEKKAKNSCMDYGFH-----------MAITKWDEVVSDEMEVMVKEKGINSF---KF 202
+ + N G++ ++ + + + DE+E + + + +
Sbjct: 66 LDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEI 125
Query: 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262
+ + +++ I G H E + G+
Sbjct: 126 GTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGH 185
Query: 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS--MDAMEEIAKARKAGP 308
+ + I L +V + + + R G
Sbjct: 186 CDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGL 233
>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837
{Enterococcus faecalis [TaxId: 1351]}
Length = 267
Score = 31.0 bits (68), Expect = 0.18
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 9/72 (12%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK 165
G ID H H F D+ + G T VI + + A+
Sbjct: 1 GWIDDHVHC---FEKMALYYDYPD--EIGVKKGVTT----VIDAGTTGAENIHEFYDLAQ 51
Query: 166 NSCMDYGFHMAI 177
+ + + I
Sbjct: 52 QAKTNVFGLVNI 63
>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium
acetobutylicum [TaxId: 1488]}
Length = 310
Score = 30.9 bits (68), Expect = 0.21
Identities = 25/177 (14%), Positives = 42/177 (23%), Gaps = 33/177 (18%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFF--------------------------SGQAAALAGG 138
PG D H H + +D + G
Sbjct: 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNG 60
Query: 139 TTMHIDFVIPINGSLTAGFEAYEKKAKNSC-----MDYGFHMAITKWDEVVSDEMEVMVK 193
TT F S F K + MDY +T+ ++ E ++
Sbjct: 61 TTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDTEEIIL 120
Query: 194 EKGINSF--KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM 248
+ S K + + ++EL+ K H K +
Sbjct: 121 KYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSL 177
>d1eu1a2 c.81.1.1 (A:4-625) Dimethylsulfoxide reductase (DMSO
reductase) {Rhodobacter sphaeroides [TaxId: 1063]}
Length = 622
Score = 30.4 bits (67), Expect = 0.32
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 60 GTVVNAHHQQIADVYVEDGIVVAVQPN 86
G V++ H + VE+G VA +P
Sbjct: 3 GEVMSGCHWGVFKARVENGRAVAFEPW 29
>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium
japonicum [TaxId: 375]}
Length = 325
Score = 29.1 bits (63), Expect = 0.70
Identities = 17/110 (15%), Positives = 24/110 (21%), Gaps = 26/110 (23%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFS-------------------------GQAAALAGGT 139
PG ID H HL + + A LA GT
Sbjct: 1 PGFIDGHIHLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGT 60
Query: 140 TMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEME 189
T F + FE ++ + E +
Sbjct: 61 TTCQAFTSSSPVATEELFEEASRRNMRVIAGLTG-IDRNAPAEFIDTPEN 109
>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Thermotoga maritima
[TaxId: 2336]}
Length = 288
Score = 28.7 bits (62), Expect = 0.88
Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 7/75 (9%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP-----INGSLTAGFEAY 160
G +DPH H + DF + + G T + + + L +
Sbjct: 1 GFVDPHIHGVVGADTMN--CDFSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYI 58
Query: 161 EKKAKNSCMDYGFHM 175
+ S +
Sbjct: 59 LENPSTSLLGVHLEG 73
>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 313
Score = 27.8 bits (60), Expect = 1.9
Identities = 16/113 (14%), Positives = 26/113 (23%), Gaps = 26/113 (23%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFF--------------------------SGQAAALAGG 138
PG +D H H + +ID L G
Sbjct: 1 PGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNG 60
Query: 139 TTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191
TT F S + +K + + + + E E +
Sbjct: 61 TTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLNDTFPEYKETTEESI 113
>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824
{Deinococcus radiodurans [TaxId: 1299]}
Length = 308
Score = 27.8 bits (60), Expect = 2.0
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 105 PGGIDPHTHLAMEFMGSE 122
P ++ HTHL M +
Sbjct: 1 PPPVNAHTHLDMSAYEFQ 18
>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Escherichia coli
[TaxId: 562]}
Length = 297
Score = 27.1 bits (58), Expect = 3.3
Identities = 29/236 (12%), Positives = 58/236 (24%), Gaps = 10/236 (4%)
Query: 106 GGIDPHTHLA-----MEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLT----AG 156
G ID + + + +++ Q A G T ++ +I + L
Sbjct: 1 GFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRV 60
Query: 157 FEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL 216
Y K N + + + + K +
Sbjct: 61 MREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAP 120
Query: 217 LIEGFKRCKSLGALAMVHAENGDAVFEGQ-KRMIELGITGPEGHALSRPPLLEGEATTRA 275
+ + L +V + + K GIT + P + E
Sbjct: 121 EMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAG 180
Query: 276 IRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGPNFLNTTIPLCDSCSNIIRMVEFC 331
L E + + +D R G T + +NI + +
Sbjct: 181 AILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAG 236
>d1nria_ c.80.1.3 (A:) Hypothetical protein HI0754 {Haemophilus
influenzae [TaxId: 727]}
Length = 248
Score = 26.6 bits (58), Expect = 4.4
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 3/134 (2%)
Query: 135 LAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194
+ GT+ + + T G K + + + E + + ++
Sbjct: 66 IGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEG-AEDNTKAVLNDLQS 124
Query: 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254
+ + S +I G + KSLGAL + A N + + I
Sbjct: 125 IHFSKNDVLVGIAASGRTPY--VIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIV 182
Query: 255 GPEGHALSRPPLLE 268
GPE S
Sbjct: 183 GPEILTGSSRLKSG 196
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain
{Escherichia coli [TaxId: 562]}
Length = 320
Score = 26.4 bits (56), Expect = 5.2
Identities = 23/172 (13%), Positives = 42/172 (24%), Gaps = 30/172 (17%)
Query: 108 IDPHTHLAMEFMGSE-----------------------TIDDFFS----GQAAALAGGTT 140
++PH HL + T DD +A G
Sbjct: 3 VEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQ 62
Query: 141 MHIDFVIPINGSLTA---GFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGI 197
V + +LTA E ++ A + + + G
Sbjct: 63 HVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGA 122
Query: 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249
+ ++ + E L + F + L VH + D +
Sbjct: 123 DVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETV 174
>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas
macleodii [TaxId: 28108]}
Length = 310
Score = 26.6 bits (56), Expect = 5.4
Identities = 25/206 (12%), Positives = 51/206 (24%), Gaps = 12/206 (5%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAAL-----------AGGTTMHIDFVIPINGSLT 154
G +D H H E+ + A+ +G TT+ +
Sbjct: 1 GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISL 60
Query: 155 AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIND 214
K A G +A T ++ V + + +
Sbjct: 61 RDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVR 120
Query: 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI-ELGITGPEGHALSRPPLLEGEATT 273
+ +G K ++ + + + + + E
Sbjct: 121 QRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEGMK 180
Query: 274 RAIRLAEFVNTPLYVVHVMSMDAMEE 299
RAI+ + + +MD M E
Sbjct: 181 RAIKAGVDSIEHGTFMDLEAMDLMIE 206
>d2q07a1 b.122.1.1 (A:460-527) Uncharacterized protein AF0587
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 68
Score = 24.6 bits (54), Expect = 5.4
Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 4/31 (12%)
Query: 80 VVAVQPNINVGDDVKVLD----ATGKFVMPG 106
V+ I D V + G M G
Sbjct: 19 VLRADEKIRPNDVVVFHNSRIFGVGLAAMSG 49
>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus
subtilis [TaxId: 1423]}
Length = 300
Score = 26.1 bits (55), Expect = 6.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSG 130
PG +DPHTHL + ++ G
Sbjct: 1 PGLVDPHTHLVFGGSREKEMNLKLQG 26
>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453
{Bifidobacterium longum [TaxId: 216816]}
Length = 324
Score = 26.2 bits (55), Expect = 6.8
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSGQ 131
PG I+ HTHL + GQ
Sbjct: 1 PGLINAHTHLFSQGKPLNPKLATPKGQ 27
>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094
{Environmental samples}
Length = 336
Score = 26.0 bits (55), Expect = 6.9
Identities = 4/15 (26%), Positives = 7/15 (46%)
Query: 105 PGGIDPHTHLAMEFM 119
P ++ H HL +
Sbjct: 1 PAWVNTHHHLFQSLL 15
>d1tmoa2 c.81.1.1 (A:5-631) Trimethylamine N-oxide reductase
{Shewanella massilia [TaxId: 76854]}
Length = 627
Score = 25.8 bits (55), Expect = 8.5
Identities = 3/14 (21%), Positives = 9/14 (64%)
Query: 73 VYVEDGIVVAVQPN 86
+ ++G++ V+P
Sbjct: 17 MKRKNGVIAEVKPF 30
>d2op5a1 d.58.4.22 (A:4-115) Hypothetical protein GOS_7213774
{environmental samples}
Length = 112
Score = 24.8 bits (54), Expect = 8.6
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Query: 173 FHMAITKWDEVVSDEMEVMVKEKGINSFKF-FMAYKGSFMI------NDELLIEGFKRCK 225
+ + DEV S+++ + G+ + K I + + EG+++C+
Sbjct: 20 LELFLKSLDEVWSEDLYSRLSAAGLIRHVISKVWNKEQHRISMVFEYDSK---EGYQKCQ 76
Query: 226 SL 227
+
Sbjct: 77 EI 78
>d1y5ia2 c.81.1.1 (A:1-1074) Respiratory nitrate reductase 1 alpha
chain {Escherichia coli [TaxId: 562]}
Length = 1074
Score = 25.9 bits (56), Expect = 8.9
Identities = 4/15 (26%), Positives = 8/15 (53%)
Query: 72 DVYVEDGIVVAVQPN 86
+YV++G+V
Sbjct: 60 KIYVKNGLVTWETQQ 74
>d1vlfm2 c.81.1.1 (M:1-728) Transhydroxylase alpha subunit, AthL
{Pelobacter acidigallici [TaxId: 35816]}
Length = 728
Score = 25.8 bits (55), Expect = 9.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 73 VYVEDGIVVAVQPN 86
VYV+DG ++ + P
Sbjct: 18 VYVKDGKIIRMTPM 31
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.402
Gapped
Lambda K H
0.267 0.0682 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,244,252
Number of extensions: 58789
Number of successful extensions: 238
Number of sequences better than 10.0: 1
Number of HSP's gapped: 221
Number of HSP's successfully gapped: 63
Length of query: 331
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 245
Effective length of database: 1,226,816
Effective search space: 300569920
Effective search space used: 300569920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.3 bits)