Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>020080
MARGEWGYQGLWRGKWCCSYKKTTLIICFINIVIALYVLRSIYASIYVFSRNDLKVVKYT
PDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQS
SDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALSE
EIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIRWGLTH
HRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPK
LNFKDRYSEKYRNAHPAAPLVVPWVSGVVSL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020080
        (331 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2119191 - symbol:AT4G33380 species:3702 "Arabi...  1064  1.3e-107  1
TAIR|locus:4010713411 - symbol:AT1G04555 "AT1G04555" spec...   143  2.0e-09   1


>TAIR|locus:2119191 [details] [associations]
            symbol:AT4G33380 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=IDA] GO:GO:0005794
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AY064143 EMBL:AY097415
            IPI:IPI00544775 RefSeq:NP_195064.2 UniGene:At.27071 PRIDE:Q8VZI6
            EnsemblPlants:AT4G33380.1 GeneID:829475 KEGG:ath:AT4G33380
            TAIR:At4g33380 eggNOG:NOG330482 HOGENOM:HOG000239516
            InParanoid:Q8VZI6 OMA:CPSEFGC PhylomeDB:Q8VZI6
            ProtClustDB:CLSN2690353 Genevestigator:Q8VZI6 Uniprot:Q8VZI6
        Length = 328

 Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
 Identities = 200/331 (60%), Positives = 247/331 (74%)

Query:     1 MARGEWGYQGLWRGKWCCSYKKTTLIICFINIVIALYVLRSIYAS-IYVFSRNDLKVVKY 59
             MARG   + G   G    S+K+ TL++CF NI+IAL+VLR +YAS ++++S ND  VVKY
Sbjct:     1 MARGGGEWTGGIAGTGVLSFKRITLLVCFFNILIALFVLRFLYASSLHIYSNND-NVVKY 59

Query:    60 TPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQ 119
             T D+IR MEES+RIR   EP  +++LV  LK E S  ES  EL   VK +++DEIL+RL+
Sbjct:    60 TADEIRKMEESIRIRRSKEPTLILQLVKKLKHEVSTAESSTELSPNVKHKLVDEILQRLK 119

Query:   120 SSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALS 179
             S + K NV+  RE VE+WR EKLEEAK+L  G+ G+NST++ EEA MLVR LE +W  LS
Sbjct:   120 SFEDKSNVTQLREVVETWRNEKLEEAKELIQGQNGVNSTLIVEEAGMLVRALELEWDVLS 179

Query:   180 EEIGLWIPTEIIHKEHGDKPKGXXXXXXXXXXXPGRPPPPECHAELHTDYDGVAIRWGLT 239
             EEIG W+P E+ + EH DKP+G            GRP P  C+AELHTDY G A+RWGLT
Sbjct:   180 EEIGFWLPAEVTNVEHDDKPEGEEEPEEILA---GRPVPAVCNAELHTDYGGAAVRWGLT 236

Query:   240 HHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKP 299
             HH++SAADCCQAC++QAKRAKPG+ +CNIWVYCP+E GC SPD YEHK+QECWLKYAEKP
Sbjct:   237 HHKESAADCCQACLDQAKRAKPGETRCNIWVYCPSEFGCFSPDIYEHKHQECWLKYAEKP 296

Query:   300 KLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 330
             K NFKDRYSE YRN HP AP +VPWVSGVV+
Sbjct:   297 KQNFKDRYSETYRNNHPKAPSIVPWVSGVVT 327


>TAIR|locus:4010713411 [details] [associations]
            symbol:AT1G04555 "AT1G04555" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:DQ487630 IPI:IPI00775670
            RefSeq:NP_001077457.1 UniGene:At.47621 PRIDE:Q1G3F4
            EnsemblPlants:AT1G04555.1 GeneID:5007662 KEGG:ath:AT1G04555
            TAIR:At1g04555 OMA:LRRAMEP PhylomeDB:Q1G3F4 ProtClustDB:CLSN2693349
            Genevestigator:Q1G3F4 Uniprot:Q1G3F4
        Length = 152

 Score = 143 (55.4 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 37/143 (25%), Positives = 76/143 (53%)

Query:    12 WRGKWCCSYKKTTLIICFINIVIALYVLRSIYASIYVFSRNDLKVVKYTPDQIRNMEESV 71
             WR ++  S+K  T+ +  IN++I L++L+  + S    S +     +    Q+R ++E+ 
Sbjct:     5 WRMRF--SFKNATIALTVINVLIFLFLLQGFFTSSSSPSSSSSSR-RLISAQLRYIKEAE 61

Query:    72 RIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSDVKGNVSAQR 131
              +R   +P+ L++ V  ++QE S  +   E  + VK     ++ +RL+      + S+ +
Sbjct:    62 ELRLKMQPLELIRRVREIEQEASAGQET-EQQKDVKQTTAVDLSKRLKDFRALNDASSLK 120

Query:   132 EAVESWRREKLEEAKQLSIGRQG 154
              A+E WR+ K+E A+Q  + + G
Sbjct:   121 -ALEEWRKRKMERARQRDLEKTG 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      331       320   0.00084  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  263 KB (2138 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.22u 0.10s 27.32t   Elapsed:  00:00:01
  Total cpu time:  27.22u 0.10s 27.32t   Elapsed:  00:00:01
  Start:  Sat May 11 00:24:17 2013   End:  Sat May 11 00:24:18 2013

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