Query 020082
Match_columns 331
No_of_seqs 161 out of 1644
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:30:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020082.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020082hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n2t_A Putative oxidoreductase 100.0 6.1E-61 2.1E-65 445.1 30.6 290 3-315 30-332 (348)
2 1pyf_A IOLS protein; beta-alph 100.0 3E-61 1E-65 441.3 27.3 290 3-314 12-311 (312)
3 1pz1_A GSP69, general stress p 100.0 2.7E-60 9.3E-65 438.4 28.5 292 3-315 12-313 (333)
4 1gve_A Aflatoxin B1 aldehyde r 100.0 7E-59 2.4E-63 428.3 30.5 303 3-330 4-327 (327)
5 3eau_A Voltage-gated potassium 100.0 3.8E-59 1.3E-63 430.2 28.7 295 3-315 14-324 (327)
6 3erp_A Putative oxidoreductase 100.0 1.3E-58 4.4E-63 430.2 32.5 288 3-312 45-349 (353)
7 3v0s_A Perakine reductase; AKR 100.0 4.7E-60 1.6E-64 437.4 21.6 291 3-315 12-312 (337)
8 3n6q_A YGHZ aldo-keto reductas 100.0 3.1E-58 1.1E-62 427.0 32.3 297 3-315 24-335 (346)
9 3lut_A Voltage-gated potassium 100.0 1.2E-58 4.2E-63 432.7 28.0 296 3-316 48-359 (367)
10 1lqa_A TAS protein; TIM barrel 100.0 8.1E-58 2.8E-62 424.6 31.8 288 3-315 12-341 (346)
11 1ur3_M Hypothetical oxidoreduc 100.0 6.7E-58 2.3E-62 419.5 30.8 269 3-314 34-315 (319)
12 2bp1_A Aflatoxin B1 aldehyde r 100.0 5.4E-58 1.8E-62 427.0 29.2 303 3-330 37-360 (360)
13 1ynp_A Oxidoreductase, AKR11C1 100.0 1.3E-56 4.4E-61 410.8 26.1 270 3-315 32-310 (317)
14 3up8_A Putative 2,5-diketo-D-g 100.0 3.4E-56 1.2E-60 403.5 26.1 250 3-316 33-284 (298)
15 4gie_A Prostaglandin F synthas 100.0 2E-55 6.7E-60 398.1 25.4 252 3-316 23-276 (290)
16 4f40_A Prostaglandin F2-alpha 100.0 2E-55 6.7E-60 397.9 24.8 250 3-316 20-278 (288)
17 3f7j_A YVGN protein; aldo-keto 100.0 3.3E-55 1.1E-59 394.0 25.4 249 3-316 16-266 (276)
18 3o0k_A Aldo/keto reductase; ss 100.0 2.4E-55 8.3E-60 395.6 23.2 245 3-311 36-282 (283)
19 3b3e_A YVGN protein; aldo-keto 100.0 6.6E-55 2.3E-59 397.2 25.4 249 3-316 50-300 (310)
20 2wzm_A Aldo-keto reductase; ox 100.0 1.1E-54 3.7E-59 391.6 25.5 250 3-316 21-272 (283)
21 1vbj_A Prostaglandin F synthas 100.0 1.2E-54 4.2E-59 390.8 25.7 249 3-316 19-269 (281)
22 1hw6_A 2,5-diketo-D-gluconic a 100.0 7.7E-55 2.6E-59 391.9 23.3 248 3-315 13-265 (278)
23 3buv_A 3-OXO-5-beta-steroid 4- 100.0 2.2E-54 7.7E-59 397.7 26.6 262 3-316 17-307 (326)
24 3ln3_A Dihydrodiol dehydrogena 100.0 4.5E-54 1.5E-58 395.6 28.6 262 3-317 16-306 (324)
25 4gac_A Alcohol dehydrogenase [ 100.0 1.9E-54 6.4E-59 398.5 25.6 264 3-316 12-296 (324)
26 3o3r_A Aldo-keto reductase fam 100.0 2.5E-54 8.7E-59 395.9 26.3 262 3-321 12-302 (316)
27 3b3d_A YTBE protein, putative 100.0 1.1E-54 3.6E-59 397.4 23.6 254 3-317 50-305 (314)
28 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 2.9E-54 1E-58 396.5 26.6 261 3-316 15-304 (323)
29 1s1p_A Aldo-keto reductase fam 100.0 7.2E-54 2.5E-58 395.0 27.7 261 3-316 15-304 (331)
30 1qwk_A Aldose reductase, aldo- 100.0 6.7E-54 2.3E-58 393.1 25.3 266 3-316 15-297 (317)
31 1vp5_A 2,5-diketo-D-gluconic a 100.0 6.6E-54 2.3E-58 388.5 24.1 246 3-315 25-278 (298)
32 1mzr_A 2,5-diketo-D-gluconate 100.0 6E-54 2.1E-58 388.5 23.7 246 3-315 35-285 (296)
33 4exb_A Putative uncharacterize 100.0 3.7E-54 1.3E-58 389.8 20.5 236 3-303 41-292 (292)
34 1us0_A Aldose reductase; oxido 100.0 4.8E-53 1.6E-57 387.4 26.7 257 3-316 12-297 (316)
35 3krb_A Aldose reductase; ssgci 100.0 4.5E-53 1.5E-57 390.0 24.9 259 2-315 23-317 (334)
36 3h7u_A Aldo-keto reductase; st 100.0 8E-53 2.7E-57 388.3 25.3 259 3-315 35-309 (335)
37 1mi3_A Xylose reductase, XR; a 100.0 1.2E-52 4E-57 385.8 25.1 260 3-315 15-307 (322)
38 1zgd_A Chalcone reductase; pol 100.0 7.9E-53 2.7E-57 385.1 22.8 253 3-314 19-295 (312)
39 2bgs_A Aldose reductase; holoe 100.0 3.9E-52 1.3E-56 384.2 24.4 248 3-316 47-317 (344)
40 3h7r_A Aldo-keto reductase; st 100.0 3.4E-52 1.2E-56 383.3 23.5 248 3-314 35-304 (331)
41 3cf4_A Acetyl-COA decarboxylas 98.3 4.3E-07 1.5E-11 91.7 6.6 132 97-289 231-384 (807)
42 1wv2_A Thiazole moeity, thiazo 92.3 5 0.00017 34.4 14.7 105 87-194 83-192 (265)
43 1nvm_A HOA, 4-hydroxy-2-oxoval 80.9 6.4 0.00022 35.4 8.7 104 88-195 27-139 (345)
44 2ftp_A Hydroxymethylglutaryl-C 78.5 10 0.00034 33.3 9.1 105 88-195 27-143 (302)
45 1ydo_A HMG-COA lyase; TIM-barr 77.1 9.5 0.00033 33.6 8.5 104 88-195 25-141 (307)
46 2rdx_A Mandelate racemase/muco 74.7 42 0.0014 30.2 12.5 74 127-201 225-300 (379)
47 2pgw_A Muconate cycloisomerase 74.3 44 0.0015 30.1 12.5 102 87-200 200-303 (384)
48 1uwk_A Urocanate hydratase; hy 73.4 7.1 0.00024 36.5 6.7 61 101-169 204-266 (557)
49 1ydn_A Hydroxymethylglutaryl-C 72.5 6.3 0.00022 34.4 6.1 104 88-196 23-140 (295)
50 1x87_A Urocanase protein; stru 71.9 7.2 0.00025 36.5 6.3 61 101-169 199-261 (551)
51 4djd_D C/Fe-SP, corrinoid/iron 71.1 16 0.00055 32.5 8.3 90 102-197 91-188 (323)
52 2cw6_A Hydroxymethylglutaryl-C 71.0 52 0.0018 28.6 12.9 105 88-195 24-140 (298)
53 2fkn_A Urocanate hydratase; ro 70.5 7.2 0.00025 36.5 6.0 61 101-169 200-262 (552)
54 1mdl_A Mandelate racemase; iso 70.5 47 0.0016 29.6 11.6 97 88-196 200-298 (359)
55 2qgy_A Enolase from the enviro 69.0 67 0.0023 29.0 13.2 98 88-197 205-304 (391)
56 2yci_X 5-methyltetrahydrofolat 64.2 69 0.0024 27.5 12.3 101 89-201 32-137 (271)
57 2p8b_A Mandelate racemase/muco 64.0 40 0.0014 30.2 9.8 73 127-200 225-299 (369)
58 1kko_A 3-methylaspartate ammon 62.9 91 0.0031 28.4 12.3 106 88-198 249-361 (413)
59 2nql_A AGR_PAT_674P, isomerase 62.0 14 0.00048 33.6 6.4 102 88-201 219-321 (388)
60 2qde_A Mandelate racemase/muco 58.7 1E+02 0.0036 27.7 13.2 102 88-201 200-303 (397)
61 1vpy_A Protein (hypothetical p 58.6 68 0.0023 27.8 9.9 121 50-196 54-180 (289)
62 2ovl_A Putative racemase; stru 58.5 1E+02 0.0035 27.5 12.9 99 88-198 202-302 (371)
63 2o56_A Putative mandelate race 58.4 43 0.0015 30.5 9.0 100 87-198 225-326 (407)
64 1tx2_A DHPS, dihydropteroate s 57.7 86 0.0029 27.3 10.3 100 90-197 62-167 (297)
65 2og9_A Mandelate racemase/muco 57.6 45 0.0015 30.2 9.0 99 87-197 217-317 (393)
66 3qy7_A Tyrosine-protein phosph 57.1 45 0.0015 28.4 8.4 159 18-196 15-193 (262)
67 3gd6_A Muconate cycloisomerase 56.6 43 0.0015 30.3 8.7 103 88-201 198-301 (391)
68 2poz_A Putative dehydratase; o 56.5 35 0.0012 30.9 8.0 99 88-198 210-310 (392)
69 3k13_A 5-methyltetrahydrofolat 54.2 72 0.0025 27.8 9.3 105 89-201 35-145 (300)
70 1wa3_A 2-keto-3-deoxy-6-phosph 53.7 84 0.0029 25.1 9.7 89 89-194 20-109 (205)
71 1sjd_A N-acylamino acid racema 52.8 48 0.0016 29.6 8.3 101 88-201 194-296 (368)
72 3eeg_A 2-isopropylmalate synth 52.6 1.2E+02 0.0041 26.6 11.9 92 94-193 30-139 (325)
73 2h9a_B CO dehydrogenase/acetyl 52.4 70 0.0024 28.1 8.9 90 103-197 85-181 (310)
74 1tkk_A Similar to chloromucona 52.1 1.3E+02 0.0043 26.7 12.8 103 88-200 196-300 (366)
75 3ik4_A Mandelate racemase/muco 52.0 52 0.0018 29.5 8.3 87 108-201 214-302 (365)
76 2pp0_A L-talarate/galactarate 51.2 67 0.0023 29.1 9.1 99 87-197 230-330 (398)
77 1eye_A DHPS 1, dihydropteroate 50.7 1.2E+02 0.0042 26.1 11.6 102 88-197 26-132 (280)
78 3s5s_A Mandelate racemase/muco 50.4 52 0.0018 29.8 8.1 88 107-201 214-303 (389)
79 2zad_A Muconate cycloisomerase 50.3 1.3E+02 0.0045 26.4 13.2 105 87-201 192-297 (345)
80 3i4k_A Muconate lactonizing en 49.5 72 0.0025 28.7 8.9 102 88-201 205-308 (383)
81 3eez_A Putative mandelate race 49.2 1.5E+02 0.005 26.6 11.5 83 110-201 216-300 (378)
82 3dg3_A Muconate cycloisomerase 48.6 49 0.0017 29.6 7.6 72 128-201 225-298 (367)
83 2qq6_A Mandelate racemase/muco 48.4 50 0.0017 30.0 7.7 99 88-198 221-321 (410)
84 1f6y_A 5-methyltetrahydrofolat 47.9 1.3E+02 0.0044 25.6 12.3 100 89-197 23-124 (262)
85 4h1z_A Enolase Q92ZS5; dehydra 47.5 35 0.0012 31.2 6.5 88 109-202 258-346 (412)
86 1r0m_A N-acylamino acid racema 47.2 48 0.0017 29.7 7.4 100 88-200 200-301 (375)
87 1nu5_A Chloromuconate cycloiso 47.1 1.5E+02 0.0052 26.2 14.7 102 88-201 199-302 (370)
88 2akz_A Gamma enolase, neural; 46.9 1.8E+02 0.006 26.8 11.4 97 88-195 270-369 (439)
89 2gl5_A Putative dehydratase pr 46.7 53 0.0018 29.9 7.6 98 88-197 229-328 (410)
90 3ijw_A Aminoglycoside N3-acety 46.3 32 0.0011 29.6 5.5 53 94-146 17-74 (268)
91 2xvc_A ESCRT-III, SSO0910; cel 45.6 14 0.00048 23.6 2.4 19 124-142 39-57 (59)
92 2ox4_A Putative mandelate race 45.5 44 0.0015 30.3 6.8 99 88-198 220-320 (403)
93 3jva_A Dipeptide epimerase; en 45.3 83 0.0028 27.9 8.5 84 109-198 209-294 (354)
94 3u9i_A Mandelate racemase/muco 45.1 64 0.0022 29.3 7.8 94 101-201 237-332 (393)
95 1y14_A B32, RPB4, DNA-directed 44.8 80 0.0027 25.5 7.3 59 246-316 126-184 (187)
96 3q45_A Mandelate racemase/muco 44.8 43 0.0015 30.1 6.5 73 128-201 224-298 (368)
97 3qtp_A Enolase 1; glycolysis, 43.7 2E+02 0.0068 26.6 13.5 98 88-195 279-379 (441)
98 3mwc_A Mandelate racemase/muco 43.1 1.9E+02 0.0065 26.1 12.2 101 88-201 216-318 (400)
99 2hzg_A Mandelate racemase/muco 42.9 40 0.0014 30.6 6.1 95 89-195 207-304 (401)
100 1vpq_A Hypothetical protein TM 42.9 50 0.0017 28.4 6.4 154 6-195 15-180 (273)
101 2zc8_A N-acylamino acid racema 42.7 52 0.0018 29.4 6.8 100 88-200 193-294 (369)
102 3noy_A 4-hydroxy-3-methylbut-2 42.6 1.8E+02 0.0062 26.0 9.9 100 88-201 43-148 (366)
103 2c35_A Human RPB4, DNA-directe 42.4 89 0.0031 24.2 7.2 61 245-317 89-149 (152)
104 2al1_A Enolase 1, 2-phospho-D- 42.2 2.1E+02 0.0071 26.3 12.8 97 88-195 273-372 (436)
105 3p6l_A Sugar phosphate isomera 41.9 1.2E+02 0.0042 24.9 8.8 96 93-198 24-136 (262)
106 2p0o_A Hypothetical protein DU 41.8 1.8E+02 0.0061 26.2 10.0 116 139-294 114-236 (372)
107 3bjs_A Mandelate racemase/muco 41.4 2.1E+02 0.0071 26.1 13.8 97 87-195 239-338 (428)
108 3h87_C Putative uncharacterize 41.3 68 0.0023 21.6 5.4 58 244-306 12-69 (73)
109 2nyg_A YOKD protein; PFAM02522 41.3 45 0.0015 28.8 5.8 53 94-146 15-72 (273)
110 3obe_A Sugar phosphate isomera 41.2 1.2E+02 0.004 26.1 8.7 17 179-195 117-133 (305)
111 4f0h_B Ribulose bisphosphate c 40.3 1.2E+02 0.0041 23.1 7.5 85 6-115 2-86 (138)
112 3r0u_A Enzyme of enolase super 39.6 2.1E+02 0.0071 25.6 12.7 87 109-201 214-302 (379)
113 1k77_A EC1530, hypothetical pr 39.5 86 0.003 25.8 7.4 19 179-197 88-106 (260)
114 1chr_A Chloromuconate cycloiso 39.4 1.5E+02 0.0051 26.4 9.4 86 110-201 215-302 (370)
115 3ngf_A AP endonuclease, family 39.2 1.1E+02 0.0036 25.6 8.0 19 179-197 96-114 (269)
116 2chr_A Chloromuconate cycloiso 38.6 77 0.0026 28.2 7.3 73 128-201 228-302 (370)
117 3ri6_A O-acetylhomoserine sulf 38.5 1.3E+02 0.0045 27.4 9.0 101 95-203 108-211 (430)
118 1vp8_A Hypothetical protein AF 38.2 1.2E+02 0.004 24.7 7.3 89 111-201 17-110 (201)
119 3sma_A FRBF; N-acetyl transfer 38.2 42 0.0014 29.2 5.0 54 93-146 23-81 (286)
120 3i6e_A Muconate cycloisomerase 37.8 91 0.0031 28.1 7.6 73 128-201 232-306 (385)
121 2hk0_A D-psicose 3-epimerase; 37.5 52 0.0018 28.2 5.8 55 142-198 22-88 (309)
122 1aj0_A DHPS, dihydropteroate s 37.4 1.7E+02 0.0057 25.2 8.9 100 89-197 36-141 (282)
123 1y7y_A C.AHDI; helix-turn-heli 37.4 16 0.00055 23.7 1.9 24 244-267 13-36 (74)
124 1wuf_A Hypothetical protein LI 37.3 88 0.003 28.2 7.5 87 109-201 227-315 (393)
125 1bxn_I Rubisco, protein (ribul 36.4 1.4E+02 0.0048 22.8 7.6 85 6-115 2-86 (139)
126 2q5c_A NTRC family transcripti 36.3 61 0.0021 26.2 5.6 68 124-197 80-150 (196)
127 3my9_A Muconate cycloisomerase 36.2 80 0.0027 28.3 7.0 73 128-201 231-305 (377)
128 3vnd_A TSA, tryptophan synthas 36.0 1.1E+02 0.0039 26.0 7.5 22 89-111 30-51 (267)
129 3p3b_A Mandelate racemase/muco 35.8 1E+02 0.0035 27.8 7.7 94 88-195 212-311 (392)
130 3v7e_A Ribosome-associated pro 35.7 67 0.0023 21.9 5.0 57 131-196 3-60 (82)
131 2oz8_A MLL7089 protein; struct 35.6 2.4E+02 0.0083 25.2 13.8 95 88-195 201-296 (389)
132 3u0h_A Xylose isomerase domain 34.9 1.5E+02 0.0052 24.5 8.3 47 149-195 48-103 (281)
133 3qhx_A Cystathionine gamma-syn 34.7 1.6E+02 0.0054 26.2 8.8 58 146-203 137-195 (392)
134 3mkc_A Racemase; metabolic pro 34.6 1.1E+02 0.0038 27.6 7.6 97 89-197 218-316 (394)
135 3ndn_A O-succinylhomoserine su 34.4 2.1E+02 0.0072 25.7 9.6 100 96-203 108-210 (414)
136 3tj4_A Mandelate racemase; eno 34.3 1.9E+02 0.0064 25.8 9.1 83 108-196 222-306 (372)
137 2hxt_A L-fuconate dehydratase; 34.2 2.7E+02 0.0093 25.4 13.2 97 87-195 252-351 (441)
138 3ro6_B Putative chloromuconate 34.0 2.5E+02 0.0084 24.8 10.8 103 88-201 195-299 (356)
139 4dwd_A Mandelate racemase/muco 33.8 1.1E+02 0.0036 27.8 7.4 97 88-197 202-300 (393)
140 3qc0_A Sugar isomerase; TIM ba 33.8 32 0.0011 28.8 3.7 68 129-197 22-104 (275)
141 4ggi_A UDP-2,3-diacylglucosami 33.8 55 0.0019 28.3 5.2 46 150-197 234-279 (283)
142 3lab_A Putative KDPG (2-keto-3 33.3 94 0.0032 25.7 6.3 88 89-194 23-117 (217)
143 3h0g_D DNA-directed RNA polyme 32.9 1.1E+02 0.0037 23.3 6.1 77 227-317 56-132 (135)
144 2ewt_A BLDD, putative DNA-bind 32.3 18 0.00061 23.3 1.4 23 245-267 9-31 (71)
145 3dip_A Enolase; structural gen 32.3 1.1E+02 0.0038 27.8 7.3 98 88-197 224-324 (410)
146 3qn3_A Enolase; structural gen 32.2 2.9E+02 0.01 25.1 10.5 99 88-197 261-364 (417)
147 4e38_A Keto-hydroxyglutarate-a 32.1 1.4E+02 0.005 24.8 7.3 89 89-194 44-132 (232)
148 3fv9_G Mandelate racemase/muco 31.6 1.9E+02 0.0064 26.0 8.7 92 100-201 213-306 (386)
149 4dxk_A Mandelate racemase / mu 31.1 85 0.0029 28.5 6.3 83 110-198 237-321 (400)
150 3mqt_A Mandelate racemase/muco 30.9 1.1E+02 0.0038 27.6 7.0 97 89-197 213-311 (394)
151 1kcz_A Beta-methylaspartase; b 30.8 1.6E+02 0.0056 26.6 8.2 70 126-196 283-359 (413)
152 1bwv_S Rubisco, protein (ribul 30.6 1.8E+02 0.0061 22.2 7.6 84 6-114 2-85 (138)
153 2ps2_A Putative mandelate race 30.3 80 0.0027 28.2 5.9 73 128-201 228-302 (371)
154 1i60_A IOLI protein; beta barr 30.1 1.6E+02 0.0054 24.3 7.6 48 149-196 47-104 (278)
155 1olt_A Oxygen-independent copr 29.9 1.7E+02 0.006 26.8 8.3 26 89-115 218-243 (457)
156 2r1j_L Repressor protein C2; p 29.8 14 0.00049 23.4 0.6 21 247-267 8-28 (68)
157 2ztj_A Homocitrate synthase; ( 29.5 2.9E+02 0.01 24.7 9.6 98 88-193 22-133 (382)
158 2q02_A Putative cytoplasmic pr 29.4 2.3E+02 0.008 23.1 10.1 19 93-112 21-39 (272)
159 3b7h_A Prophage LP1 protein 11 29.3 19 0.00066 23.6 1.2 23 246-268 9-31 (78)
160 3l23_A Sugar phosphate isomera 29.2 2.6E+02 0.009 23.7 9.8 17 179-195 111-127 (303)
161 4djd_C C/Fe-SP, corrinoid/iron 28.6 3E+02 0.01 25.4 9.4 100 89-197 103-209 (446)
162 3vni_A Xylose isomerase domain 28.2 1.2E+02 0.004 25.5 6.5 41 152-194 22-65 (294)
163 2qw5_A Xylose isomerase-like T 28.1 2.5E+02 0.0087 24.1 8.8 19 179-198 112-130 (335)
164 3dxi_A Putative aldolase; TIM 28.0 2.5E+02 0.0085 24.6 8.5 106 88-195 21-133 (320)
165 3vp6_A Glutamate decarboxylase 27.8 2.8E+02 0.0096 25.7 9.5 65 139-203 218-292 (511)
166 3lmz_A Putative sugar isomeras 27.7 1.6E+02 0.0056 24.1 7.2 95 93-198 32-134 (257)
167 3ksm_A ABC-type sugar transpor 27.6 2.5E+02 0.0085 22.8 9.4 74 90-168 15-92 (276)
168 2a6c_A Helix-turn-helix motif; 27.5 30 0.001 23.3 2.0 27 244-270 18-44 (83)
169 3v5c_A Mandelate racemase/muco 27.5 1.1E+02 0.0039 27.6 6.4 90 101-197 221-313 (392)
170 4h3d_A 3-dehydroquinate dehydr 27.3 2.8E+02 0.0095 23.3 13.2 84 52-144 61-144 (258)
171 3ddm_A Putative mandelate race 27.2 1.8E+02 0.0061 26.2 7.7 68 128-196 240-309 (392)
172 1rvk_A Isomerase/lactonizing e 26.9 3.3E+02 0.011 24.1 13.3 97 88-196 211-310 (382)
173 2dqw_A Dihydropteroate synthas 26.9 2.6E+02 0.0089 24.2 8.3 89 101-197 61-154 (294)
174 4hpn_A Putative uncharacterize 26.7 2.2E+02 0.0074 25.3 8.2 68 128-196 228-297 (378)
175 2qul_A D-tagatose 3-epimerase; 26.7 1.6E+02 0.0055 24.5 7.0 44 152-197 22-68 (290)
176 2dsk_A Chitinase; catalytic do 26.5 2E+02 0.0067 25.2 7.5 107 56-168 63-178 (311)
177 2a5h_A L-lysine 2,3-aminomutas 26.5 3.6E+02 0.012 24.4 12.3 110 87-201 144-264 (416)
178 3ekg_A Mandelate racemase/muco 26.3 2.8E+02 0.0095 25.1 8.8 68 128-196 250-321 (404)
179 3acz_A Methionine gamma-lyase; 25.8 2.9E+02 0.0098 24.3 8.9 102 95-203 85-188 (389)
180 3sjn_A Mandelate racemase/muco 25.7 1.4E+02 0.0049 26.6 6.8 98 88-197 204-304 (374)
181 3ozy_A Putative mandelate race 25.7 3.6E+02 0.012 24.1 13.4 97 88-196 206-305 (389)
182 3fcp_A L-Ala-D/L-Glu epimerase 25.7 1.4E+02 0.0048 26.8 6.7 73 128-201 233-307 (381)
183 1tzz_A Hypothetical protein L1 25.6 2.4E+02 0.0082 25.2 8.3 98 88-196 221-326 (392)
184 1t57_A Conserved protein MTH16 25.2 2.1E+02 0.0072 23.3 6.7 88 111-201 25-117 (206)
185 3ff4_A Uncharacterized protein 25.2 65 0.0022 23.9 3.6 36 153-194 75-110 (122)
186 3kz3_A Repressor protein CI; f 25.0 53 0.0018 21.7 2.9 53 246-298 14-66 (80)
187 2b5a_A C.BCLI; helix-turn-heli 25.0 26 0.0009 22.8 1.2 53 245-297 11-63 (77)
188 3kws_A Putative sugar isomeras 24.9 1.5E+02 0.0052 24.8 6.5 68 129-197 42-125 (287)
189 1p1j_A Inositol-3-phosphate sy 24.9 2.2E+02 0.0076 26.8 7.7 50 90-139 220-272 (533)
190 3sbf_A Mandelate racemase / mu 24.9 1.8E+02 0.0062 26.2 7.3 70 128-198 241-312 (401)
191 1v77_A PH1877P, hypothetical p 24.9 2.7E+02 0.0094 22.4 9.2 138 25-196 16-167 (212)
192 2qdd_A Mandelate racemase/muco 24.6 3.7E+02 0.013 23.8 12.9 90 100-201 209-300 (378)
193 3l9c_A 3-dehydroquinate dehydr 24.3 3.2E+02 0.011 23.0 10.0 25 87-111 105-129 (259)
194 3rmj_A 2-isopropylmalate synth 24.3 3.8E+02 0.013 23.9 9.3 97 88-193 31-145 (370)
195 3mz2_A Glycerophosphoryl diest 24.3 1.4E+02 0.0048 25.7 6.2 65 133-197 150-236 (292)
196 3uj2_A Enolase 1; enzyme funct 24.3 4.2E+02 0.014 24.4 9.9 96 89-195 290-390 (449)
197 1cs1_A CGS, protein (cystathio 24.3 3.5E+02 0.012 23.5 12.4 102 96-203 79-181 (386)
198 3ihk_A Thiamin pyrophosphokina 24.1 2.9E+02 0.01 22.5 8.6 40 258-297 73-113 (218)
199 4hv0_A AVTR; ribbon-helix-heli 23.9 1.1E+02 0.0038 21.9 4.3 26 244-269 8-33 (106)
200 3o9z_A Lipopolysaccaride biosy 23.9 2.5E+02 0.0086 24.1 7.8 44 89-140 55-98 (312)
201 2pa6_A Enolase; glycolysis, ly 23.8 4.1E+02 0.014 24.1 10.5 95 89-194 268-365 (427)
202 3guv_A Site-specific recombina 23.7 76 0.0026 24.6 4.0 30 109-138 76-105 (167)
203 3f6w_A XRE-family like protein 23.7 26 0.0009 23.4 1.1 54 244-297 14-67 (83)
204 1qwg_A PSL synthase;, (2R)-pho 23.7 3.3E+02 0.011 23.0 9.3 96 95-194 26-132 (251)
205 2rfv_A Methionine gamma-lyase; 23.6 3.7E+02 0.013 23.5 9.5 101 95-203 90-193 (398)
206 1v5x_A PRA isomerase, phosphor 23.5 1.2E+02 0.004 24.7 5.2 74 89-171 10-84 (203)
207 3hou_D DNA-directed RNA polyme 23.4 3.1E+02 0.011 22.5 8.0 78 227-317 142-219 (221)
208 2w6k_A COBE; biosynthetic prot 23.4 1.2E+02 0.004 23.3 4.9 56 142-197 15-76 (145)
209 2p3z_A L-rhamnonate dehydratas 23.2 2.8E+02 0.0095 25.2 8.2 82 109-197 248-333 (415)
210 3r4e_A Mandelate racemase/muco 23.1 1.1E+02 0.0036 28.0 5.4 70 128-198 260-331 (418)
211 1v0l_A Endo-1,4-beta-xylanase 23.0 97 0.0033 27.1 4.9 108 89-200 147-271 (313)
212 2k9q_A Uncharacterized protein 23.0 21 0.00071 23.6 0.4 52 247-298 5-56 (77)
213 2gdq_A YITF; mandelate racemas 22.9 3.9E+02 0.013 23.7 9.2 97 88-195 195-293 (382)
214 2htm_A Thiazole biosynthesis p 22.8 1.2E+02 0.004 26.0 5.1 72 87-160 73-145 (268)
215 3v3w_A Starvation sensing prot 22.8 1.2E+02 0.0042 27.7 5.7 69 129-198 267-337 (424)
216 1adr_A P22 C2 repressor; trans 22.6 22 0.00077 23.1 0.5 21 247-267 8-28 (76)
217 3ewb_X 2-isopropylmalate synth 22.5 3.7E+02 0.012 23.0 9.4 97 88-193 24-138 (293)
218 1hjs_A Beta-1,4-galactanase; 4 22.4 2.1E+02 0.0072 25.0 7.1 48 98-145 33-80 (332)
219 3rr1_A GALD, putative D-galact 22.4 4.3E+02 0.015 23.8 13.2 98 88-197 189-288 (405)
220 2cpg_A REPA protein, transcrip 22.4 1.2E+02 0.0041 17.4 4.1 23 244-266 12-34 (45)
221 3q94_A Fructose-bisphosphate a 22.4 1.6E+02 0.0055 25.4 6.0 23 274-296 207-229 (288)
222 3qq6_A HTH-type transcriptiona 22.4 21 0.00071 23.9 0.3 52 247-298 13-65 (78)
223 2y5s_A DHPS, dihydropteroate s 22.1 1.6E+02 0.0054 25.5 6.0 100 89-197 44-148 (294)
224 1fob_A Beta-1,4-galactanase; B 21.9 1.8E+02 0.006 25.6 6.4 17 243-259 225-241 (334)
225 3lkv_A Uncharacterized conserv 21.9 3.6E+02 0.012 22.7 9.2 109 93-205 126-238 (302)
226 3s8q_A R-M controller protein; 21.8 63 0.0022 21.3 2.8 55 245-299 12-66 (82)
227 1q7z_A 5-methyltetrahydrofolat 21.7 2.9E+02 0.01 26.3 8.3 84 102-197 350-439 (566)
228 2vef_A Dihydropteroate synthas 21.5 3.4E+02 0.012 23.6 8.1 91 101-197 42-137 (314)
229 3dgb_A Muconate cycloisomerase 21.5 1.5E+02 0.0052 26.6 6.0 73 128-201 234-308 (382)
230 1x57_A Endothelial differentia 21.2 33 0.0011 23.4 1.2 22 246-267 15-36 (91)
231 2pju_A Propionate catabolism o 21.2 1.6E+02 0.0055 24.3 5.7 69 124-198 92-163 (225)
232 3qld_A Mandelate racemase/muco 21.2 1.6E+02 0.0054 26.5 6.1 87 109-201 215-303 (388)
233 4dye_A Isomerase; enolase fami 21.1 1.3E+02 0.0045 27.2 5.5 97 88-198 223-321 (398)
234 3ta6_A Triosephosphate isomera 21.1 1.5E+02 0.0051 25.4 5.5 37 265-301 224-261 (267)
235 2xi8_A Putative transcription 21.1 19 0.00066 22.6 -0.1 18 249-266 6-23 (66)
236 4f3h_A Fimxeal, putative uncha 21.1 1.2E+02 0.0043 24.9 5.1 104 89-197 107-221 (250)
237 3g5g_A Regulatory protein; tra 21.0 65 0.0022 22.6 2.8 56 244-299 28-83 (99)
238 1m65_A Hypothetical protein YC 21.0 3.3E+02 0.011 22.0 9.9 86 107-196 94-191 (245)
239 2keb_A DNA polymerase subunit 20.9 1.2E+02 0.004 21.8 3.9 26 244-269 45-70 (101)
240 2vp8_A Dihydropteroate synthas 20.8 2.7E+02 0.0094 24.3 7.3 100 89-197 63-168 (318)
241 3ks6_A Glycerophosphoryl diest 20.7 2E+02 0.0069 23.8 6.3 19 179-197 194-212 (250)
242 2jwk_A Protein TOLR; periplasm 20.7 77 0.0026 20.6 3.0 46 88-139 27-73 (74)
243 2k9i_A Plasmid PRN1, complete 20.7 1.5E+02 0.0051 17.8 4.2 25 243-267 18-42 (55)
244 3t6c_A RSPA, putative MAND fam 20.6 2.3E+02 0.0078 26.0 7.1 69 128-197 280-350 (440)
245 3mel_A Thiamin pyrophosphokina 20.6 3.5E+02 0.012 22.1 8.4 39 258-296 77-116 (222)
246 4e8g_A Enolase, mandelate race 20.4 1.5E+02 0.005 26.8 5.7 91 101-202 230-322 (391)
247 3stp_A Galactonate dehydratase 20.3 4.8E+02 0.016 23.5 12.7 97 88-196 241-339 (412)
248 1nsj_A PRAI, phosphoribosyl an 20.3 1.1E+02 0.0039 24.8 4.5 74 89-171 11-85 (205)
No 1
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=6.1e-61 Score=445.10 Aligned_cols=290 Identities=19% Similarity=0.367 Sum_probs=245.5
Q ss_pred cccceeeeccccCC--CCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheee
Q 020082 3 SVERDVADEWRVGP--YRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVR 76 (331)
Q Consensus 3 ~vS~l~lGt~~~g~--~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~ 76 (331)
.||+||||||++|. |+..+.+++.++|+.|++. ||||||||+ |.||++||++|+. +|+ .+++.+|
T Consensus 30 ~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~---~v~I~TK 100 (348)
T 3n2t_A 30 PLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDE-----GINLIDTAPVYGFGHSEEIVGRALAE-KPN---KAHVATK 100 (348)
T ss_dssp CEESEEEECTTSSCSSSCSTTHHHHHHHHHHHHHT-----TCCEEECCTTGGGGHHHHHHHHHHHH-SCC---CCEEEEE
T ss_pred ccCCEeEeCccccCCCCCCCCHHHHHHHHHHHHHc-----CCCEEEChhhcCCChHHHHHHHHHhh-CCC---eEEEEEe
Confidence 48999999999985 6777888899999999665 599999999 4699999999986 444 5666666
Q ss_pred eccccc-C------CCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCccc
Q 020082 77 GLTKWV-P------PPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFD 149 (331)
Q Consensus 77 ~~~k~~-~------~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~ 149 (331)
+...+. . ...+++++.+++++++||+||||||||+|++|||+...+ ++++|++|++|+++||||+||||||+
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~ 179 (348)
T 3n2t_A 101 LGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTP-IDESARELQKLHQDGKIRALGVSNFS 179 (348)
T ss_dssp ECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred ecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCC-HHHHHHHHHHHHHhCcceEEecCCCC
Confidence 643331 1 112468999999999999999999999999999998887 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHH
Q 020082 150 TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKY 229 (331)
Q Consensus 150 ~~~l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
+++++++++.. +|+++|++||++++..+.+++++|+++||++++|+||++|+|+|++.... .++..+.+...+.+
T Consensus 180 ~~~l~~~~~~~-~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~-~~~~~~~r~~~~~~--- 254 (348)
T 3n2t_A 180 PEQMDIFREVA-PLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDT-TFPKDDLRSNDPKF--- 254 (348)
T ss_dssp HHHHHHHHHHS-CCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTC-CCCTTSGGGGCGGG---
T ss_pred HHHHHHHHHhC-CccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCC-CCCCcchhhccccc---
Confidence 99999999865 79999999999999888899999999999999999999999999987643 22222222111111
Q ss_pred HhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHH
Q 020082 230 KRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQ 309 (331)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~ 309 (331)
....++.+.++++.++++|+++|+|++|+||+|++++ +|+++|+|+++ ++||++|+++++++||++++++|+
T Consensus 255 -----~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~-~v~~~I~g~~~--~~~l~enl~a~~~~L~~e~~~~l~ 326 (348)
T 3n2t_A 255 -----QKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQ-GPVIALWGARK--PGQVSGVKDVFGWSLTDEEKKAVD 326 (348)
T ss_dssp -----STTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTT-TTEEEEEECSS--GGGGTTHHHHSSCCCCHHHHHHHH
T ss_pred -----chhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHC-CCcEEEeCCCC--HHHHHHHHHHhCCCCCHHHHHHHH
Confidence 0111245667889999999999999999999999999 89999999999 999999999999999999999999
Q ss_pred HHhhcC
Q 020082 310 EVTKKG 315 (331)
Q Consensus 310 ~~~~~~ 315 (331)
++....
T Consensus 327 ~~~~~~ 332 (348)
T 3n2t_A 327 DILARH 332 (348)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999764
No 2
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=3e-61 Score=441.29 Aligned_cols=290 Identities=19% Similarity=0.298 Sum_probs=240.3
Q ss_pred cccceeeeccccCC---CCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchhee
Q 020082 3 SVERDVADEWRVGP---YRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~---~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~ 75 (331)
.||+||||||++|. |+..+.+++.++|+.|++. ||||||||+ |.||++||++|++.+|+ .+++.+
T Consensus 12 ~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~---~~~i~T 83 (312)
T 1pyf_A 12 QVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRN-----GVTMLDTAYIYGIGRSEELIGEVLREFNRE---DVVIAT 83 (312)
T ss_dssp EECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHT-----TCCEEECCTTTTTTHHHHHHHHHHTTSCGG---GCEEEE
T ss_pred cccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHc-----CCCEEECccccCCCchHHHHHHHhhhcCCC---eEEEEE
Confidence 58999999999985 5556778899999999665 599999999 46999999999875444 455555
Q ss_pred eecccccCC---CCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHH
Q 020082 76 RGLTKWVPP---PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTER 152 (331)
Q Consensus 76 ~~~~k~~~~---~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~ 152 (331)
|+.. +.+. ..+.+++.+++++++||+||||||||+|++|||++..+ .+++|++|++|+++||||+||||||++++
T Consensus 84 K~g~-~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 161 (312)
T 1pyf_A 84 KAAH-RKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTP-KDEAVNALNEMKKAGKIRSIGVSNFSLEQ 161 (312)
T ss_dssp EECE-EEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHH
T ss_pred EeCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCC-HHHHHHHHHHHHHCCCcCEEEecCCCHHH
Confidence 5431 1101 03578999999999999999999999999999998777 89999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhh
Q 020082 153 LRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRM 232 (331)
Q Consensus 153 l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
++++++. .+|+++|++||++++..+.+++++|+++||++++|+||++|+|+|++.... .++.++.+...+.+..
T Consensus 162 l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~-~~~~~~~r~~~~~~~~---- 235 (312)
T 1pyf_A 162 LKEANKD-GLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDT-TFPEGDLRNEQEHFKG---- 235 (312)
T ss_dssp HHHHTTT-SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTC-CCCTTCGGGGSGGGSH----
T ss_pred HHHHHhh-CCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCC-CCCCcccccccccccc----
Confidence 9999874 479999999999999887789999999999999999999999999875432 1222222211111100
Q ss_pred hhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHh
Q 020082 233 VDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVT 312 (331)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~ 312 (331)
...+.+....+.++++|+++|+|++|+||+|++++|.|+++|+|+++ ++||++|+++++.+||+++++.|++++
T Consensus 236 ----~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~--~~~l~en~~a~~~~L~~~~~~~l~~~~ 309 (312)
T 1pyf_A 236 ----ERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKR--ADQLIDNIKTADVTLSQEDISFIDKLF 309 (312)
T ss_dssp ----HHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCCCSS--HHHHHHHHGGGGCCCCHHHHHHHHHHT
T ss_pred ----hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCeEEEeCCCC--HHHHHHHHhhccCCCCHHHHHHHHHHh
Confidence 00134556678999999999999999999999999999999999999 999999999999999999999999987
Q ss_pred hc
Q 020082 313 KK 314 (331)
Q Consensus 313 ~~ 314 (331)
..
T Consensus 310 ~~ 311 (312)
T 1pyf_A 310 AP 311 (312)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 3
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=2.7e-60 Score=438.36 Aligned_cols=292 Identities=18% Similarity=0.326 Sum_probs=243.6
Q ss_pred cccceeeeccccCC--CCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhh-hcCCCccchhee
Q 020082 3 SVERDVADEWRVGP--YRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRV-RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~--~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~-~~~~~~~~~~~~ 75 (331)
.||+||||||++|. |+..+.+++.++|+.|++. ||||||||+ |.||++||++|++. +|+ .+++.+
T Consensus 12 ~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~---~~~i~T 83 (333)
T 1pz1_A 12 EASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQ-----GITLIDTAPAYGFGQSEEIVGKAIKEYMKRD---QVILAT 83 (333)
T ss_dssp EEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHT-----TCCEEECCTTGGGGHHHHHHHHHHHHHTCGG---GCEEEE
T ss_pred cccCEeEechhhcCCcCCCCCHHHHHHHHHHHHHc-----CCCeEECccccCCCchHHHHHHHHhcCCCcC---eEEEEE
Confidence 48999999999985 7767778899999999665 599999999 46999999999875 333 455555
Q ss_pred eecccc--cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHH
Q 020082 76 RGLTKW--VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERL 153 (331)
Q Consensus 76 ~~~~k~--~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l 153 (331)
|+...+ .+...+.+++.+++++++||+||||||||+|++|||++..+ ++++|++|++|+++||||+||||||+++++
T Consensus 84 K~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l 162 (333)
T 1pz1_A 84 KTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQM 162 (333)
T ss_dssp EECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSC-HHHHHHHHHHHHHTTSBSCEEECSCCHHHH
T ss_pred eeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCC-HHHHHHHHHHHHHCCcCCEEEecCCCHHHH
Confidence 553111 11111468999999999999999999999999999998877 899999999999999999999999999999
Q ss_pred HHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhh
Q 020082 154 RIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMV 233 (331)
Q Consensus 154 ~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
+++++. .+|+++|++||++++..+.+++++|+++||++++|+||++|+|+|++..... .+..+.+...+.+.
T Consensus 163 ~~~~~~-~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~-~~~~~~r~~~~~~~------ 234 (333)
T 1pz1_A 163 DTFRAV-APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYT-FEGDDLRNHDPKFQ------ 234 (333)
T ss_dssp HHHHTT-SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCC-CCTTCGGGSCGGGS------
T ss_pred HHHHhc-CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCcccccc-CCCccccccccccc------
Confidence 999885 5899999999999998878999999999999999999999999998865331 11111111111110
Q ss_pred hccCCchhHHHHHHHHHHHHHHcCC-CHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHh
Q 020082 234 DAWGGWSQFQVLLQTLKRIASKHGV-SIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVT 312 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~ia~~~g~-s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~ 312 (331)
...++.+.++++.++++|+++|+ |++|+||+|++++|.|+++|+|+++ ++||++|+++++.+||+++++.|+++.
T Consensus 235 --~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~ 310 (333)
T 1pz1_A 235 --KPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARK--PGQLEALSEITGWTLNSEDQKDINTIL 310 (333)
T ss_dssp --TTTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEECCS--GGGGTTCTTSSSCCCCHHHHHHHHHHH
T ss_pred --hhhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeCCCC--HHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 01234667788999999999999 9999999999999999999999999 999999999999999999999999998
Q ss_pred hcC
Q 020082 313 KKG 315 (331)
Q Consensus 313 ~~~ 315 (331)
...
T Consensus 311 ~~~ 313 (333)
T 1pz1_A 311 ENT 313 (333)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
No 4
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=7e-59 Score=428.30 Aligned_cols=303 Identities=17% Similarity=0.228 Sum_probs=244.1
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheeeec
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGL 78 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~~~ 78 (331)
++|+||||||+||. ..+.+++.++|+.|++. ||||||||+ |.||++||++|++.+..+. .+++.+|+.
T Consensus 4 ~~~~lglGt~~~g~--~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~-~~~i~TK~~ 75 (327)
T 1gve_A 4 ARPATVLGAMEMGR--RMDVTSSSASVRAFLQR-----GHTEIDTAFVYANGQSETILGDLGLGLGRSGC-KVKIATKAA 75 (327)
T ss_dssp CCCEEEEECTTBTT--TBCHHHHHHHHHHHHHT-----TCCEEECCTTGGGGHHHHHHTTSCCCTTSTTC-CSEEEEEEC
T ss_pred CCCCeEEcccccCC--CCCHHHHHHHHHHHHHc-----CCCEEEchhhcCCCchHHHHHHHHhhcCCCCC-eEEEEEEEC
Confidence 47999999999985 25667888888888665 599999999 5899999999975432222 355555542
Q ss_pred ccccCC-CCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHH
Q 020082 79 TKWVPP-PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIIL 157 (331)
Q Consensus 79 ~k~~~~-~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~ 157 (331)
+. +.+++++.+++++++||+||||||||+|++|||+...+ ++++|++|++|+++||||+||||||++++++++.
T Consensus 76 ----~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~ 150 (327)
T 1gve_A 76 ----PMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTP-IEETLQACHQLHQEGKFVELGLSNYVSWEVAEIC 150 (327)
T ss_dssp ----SCTTCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCC-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHH
Confidence 21 12578999999999999999999999999999998877 8999999999999999999999999999998877
Q ss_pred H----cC-CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCc-hhHHHHh
Q 020082 158 E----NG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTP-SLQKYKR 231 (331)
Q Consensus 158 ~----~~-~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 231 (331)
+ .+ ++++++|++||++++..+.+++++|+++||++++|+||++|+|+|++............++... ....+..
T Consensus 151 ~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (327)
T 1gve_A 151 TLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMD 230 (327)
T ss_dssp HHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHHHH
T ss_pred HHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcccCCCccccCCCccccccccchhhhh
Confidence 5 24 6799999999999998878999999999999999999999999998754321000011222211 0111111
Q ss_pred hhhccCCchhHHHHHHHHHHHHHH----cCCCHHHHHHHHHHhCCCc-----eeEeecccCCcHhHHHHhhchhcC-CCC
Q 020082 232 MVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVRYILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLD 301 (331)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~ia~~----~g~s~aq~Al~~~l~~~~v-----~~~i~G~~~~~~~~l~e~~~a~~~-~L~ 301 (331)
++. .+.+.+.++.++++|++ +|+|++|+||+|++++|.| +++|+|+++ ++||++|+++++. +|+
T Consensus 231 ---~~~-~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g~~~--~~~l~en~~a~~~~~L~ 304 (327)
T 1gve_A 231 ---RYW-KEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSS--LEQLEQNLALVEEGPLE 304 (327)
T ss_dssp ---HHC-SHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEECCSS--HHHHHHHHHHTTCCCCC
T ss_pred ---ccc-ChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEECCCC--HHHHHHHHHhcCCCCCC
Confidence 111 13456678999999999 9999999999999999999 899999999 9999999999987 899
Q ss_pred HHHHHHHHHHhhcCCCCCCcccccccccc
Q 020082 302 EDDVNSIQEVTKKGKDLLGVIGDCGDEYR 330 (331)
Q Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (331)
+++++.|+++... ..++|++||+
T Consensus 305 ~e~~~~l~~~~~~------~~~~~~~~~~ 327 (327)
T 1gve_A 305 PAVVDAFDQAWNL------VAHECPNYFR 327 (327)
T ss_dssp HHHHHHHHHHHHH------HGGGCCCSCC
T ss_pred HHHHHHHHHHHHh------ccCCCccccC
Confidence 9999999999876 3457888775
No 5
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=3.8e-59 Score=430.17 Aligned_cols=295 Identities=17% Similarity=0.222 Sum_probs=237.6
Q ss_pred cccceeeecc-ccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheeee
Q 020082 3 SVERDVADEW-RVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRG 77 (331)
Q Consensus 3 ~vS~l~lGt~-~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~~ 77 (331)
.||+|||||| .+|. ..+.+++.++|+.|++. ||||||||+ |.||++||++|++.+..|. .+++++|+
T Consensus 14 ~vs~iglGt~~~~g~--~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~-~v~I~TK~ 85 (327)
T 3eau_A 14 RVSCLGLGTWVTFGG--QITDEMAEHLMTLAYDN-----GINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS-SLVITTKI 85 (327)
T ss_dssp EEESEEEECTTCCCC--CSCHHHHHHHHHHHHHT-----TCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG-GCEEEEEE
T ss_pred cccceeecCccccCC--CCCHHHHHHHHHHHHHc-----CCCEEECccccCCCChHHHHHHHHHhcCCccC-eEEEEEee
Confidence 4899999998 4443 35667888888888655 599999999 6799999999997532222 55566665
Q ss_pred ccc-ccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHH
Q 020082 78 LTK-WVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRII 156 (331)
Q Consensus 78 ~~k-~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~ 156 (331)
... ..+...+++++.+++++++||+||||||||+|++|||++..+ ++++|++|++|+++||||+||||||++++++++
T Consensus 86 ~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 164 (327)
T 3eau_A 86 FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEA 164 (327)
T ss_dssp SBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHH
Confidence 311 111123578999999999999999999999999999998887 899999999999999999999999999999988
Q ss_pred HH----cC-CCeeeecccccccccCh-hhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHH
Q 020082 157 LE----NG-IPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYK 230 (331)
Q Consensus 157 ~~----~~-~~~~~vq~~~nl~~~~~-~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
.+ .+ ++++++|++||++++.. +.+++++|+++||++++|+||++|+|+|++.... |.. .+...+....+.
T Consensus 165 ~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~---~~~-~~~~~~~~~~~~ 240 (327)
T 3eau_A 165 YSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI---PPY-SRASLKGYQWLK 240 (327)
T ss_dssp HHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC---CTT-SGGGSTTCHHHH
T ss_pred HHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccCCC---CCC-cccccccccccc
Confidence 75 23 68999999999998864 5579999999999999999999999999987542 211 111111111110
Q ss_pred hhhhccC--CchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcC--CCCHHHHH
Q 020082 231 RMVDAWG--GWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVN 306 (331)
Q Consensus 231 ~~~~~~~--~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~--~L~~~~~~ 306 (331)
.++. ....+...++.++++|+++|+|++|+||+|++++|.|+++|+|+++ ++||++|+++++. +||+++++
T Consensus 241 ---~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~~~L~~e~~~ 315 (327)
T 3eau_A 241 ---DKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASN--AEQLMENIGAIQVLPKLSSSIVH 315 (327)
T ss_dssp ---HHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEECCSS--HHHHHHHHGGGGGGGGCCHHHHH
T ss_pred ---cccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeCCCC--HHHHHHHHHHhccCCCCCHHHHH
Confidence 1110 1134556789999999999999999999999999999999999999 9999999999998 99999999
Q ss_pred HHHHHhhcC
Q 020082 307 SIQEVTKKG 315 (331)
Q Consensus 307 ~l~~~~~~~ 315 (331)
+|+++..+.
T Consensus 316 ~i~~~~~~~ 324 (327)
T 3eau_A 316 EIDSILGNK 324 (327)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhhcc
Confidence 999998653
No 6
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.3e-58 Score=430.24 Aligned_cols=288 Identities=20% Similarity=0.300 Sum_probs=234.9
Q ss_pred cccceeeecc-ccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC--C----chHHHHHHHHhhh-h--cCCCccch
Q 020082 3 SVERDVADEW-RVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD--G----PAEDLYGIFINRV-R--RERPPEFL 72 (331)
Q Consensus 3 ~vS~l~lGt~-~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~--g----~sE~~lG~~l~~~-~--~~~~~~~~ 72 (331)
.||+|||||| .+|. ..+.+++.++|+.|++. ||||||||+ | .||++||++|++. + |+ .++
T Consensus 45 ~vs~lglGt~~~~g~--~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~---~v~ 114 (353)
T 3erp_A 45 KLPAISLGLWHNFGD--TTRVENSRALLQRAFDL-----GITHFDLANNYGPPPGSAECNFGRILQEDFLPWRD---ELI 114 (353)
T ss_dssp EEESEEEECSSSCST--TSCHHHHHHHHHHHHHT-----TCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGG---GCE
T ss_pred ccCCeeecChhhcCC--CCCHHHHHHHHHHHHHc-----CCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCC---eEE
Confidence 4899999999 5664 35677888888888665 599999999 4 3899999999862 2 43 566
Q ss_pred heeeecccccCCC--CCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccH
Q 020082 73 DKVRGLTKWVPPP--VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT 150 (331)
Q Consensus 73 ~~~~~~~k~~~~~--~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~ 150 (331)
+.+|+....++.+ ...+++.+++++++||+||||||||+|++|||++..+ ++++|++|++|+++||||+||||||++
T Consensus 115 I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~ 193 (353)
T 3erp_A 115 ISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETP-LKETMKALDHLVRHGKALYVGISNYPA 193 (353)
T ss_dssp EEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCH
Confidence 6666543322221 2348999999999999999999999999999998887 899999999999999999999999999
Q ss_pred HHHHHHHH----cCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchh
Q 020082 151 ERLRIILE----NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSL 226 (331)
Q Consensus 151 ~~l~~~~~----~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~ 226 (331)
++++++.+ .+++++++|++||++++..+.+++++|+++||++++|+||++|+|+|+|.... |.+ .+.....
T Consensus 194 ~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~~~---p~~-~r~~~~~- 268 (353)
T 3erp_A 194 DLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNGI---PED-SRAASGS- 268 (353)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC-----------------
T ss_pred HHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccCCC---CCc-ccccccc-
Confidence 99988875 25789999999999999888889999999999999999999999999987542 221 1111000
Q ss_pred HHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchh-cCCCCHHHH
Q 020082 227 QKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDV 305 (331)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~-~~~L~~~~~ 305 (331)
..+ ....-.+.+.+.++.+.++|+++|+|++|+||+|++++|.|+++|+|+++ ++||+||++++ +.+||++++
T Consensus 269 ~~~----~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G~~~--~~~l~enl~a~~~~~Ls~ee~ 342 (353)
T 3erp_A 269 RFL----KPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASK--PSQIEDAVGMLANRRFSAAEC 342 (353)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEECCSS--HHHHHHHHHGGGGCCCCHHHH
T ss_pred ccc----ccccccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEeCCCC--HHHHHHHHHHhccCCCCHHHH
Confidence 000 00001134667889999999999999999999999999999999999999 99999999999 789999999
Q ss_pred HHHHHHh
Q 020082 306 NSIQEVT 312 (331)
Q Consensus 306 ~~l~~~~ 312 (331)
++|+++.
T Consensus 343 ~~i~~~~ 349 (353)
T 3erp_A 343 AEIDAIL 349 (353)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 7
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=4.7e-60 Score=437.44 Aligned_cols=291 Identities=20% Similarity=0.270 Sum_probs=230.1
Q ss_pred cccceeeeccccC-CCCC-CchhhHHHHHHHHHHHhhhcCCccEEECCC--C---chHHHHHHHHhhhhcCCCccchhee
Q 020082 3 SVERDVADEWRVG-PYRP-GRRRRCHASLRRCRSHHLRHGRSLSFDFVD--G---PAEDLYGIFINRVRRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g-~~~~-~~~~~~~~~l~~al~~~~~~GGin~~DTA~--g---~sE~~lG~~l~~~~~~~~~~~~~~~ 75 (331)
.||+||||||++| .|+. .+.+++.++|+.|++. ||||||||+ | .||+.||++|++.+|+ .+++.+
T Consensus 12 ~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~---~~~i~T 83 (337)
T 3v0s_A 12 EVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNC-----GITFFDTSDIYGENGSNEELLGKALKQLPRE---XIQVGT 83 (337)
T ss_dssp EEESSCEECGGGC-------CHHHHHHHHHHHHHT-----TCCEEECCTTSSSTTHHHHHHHHHHTTSCGG---GCEEEE
T ss_pred eecCeeecccccCCCCCCCCCHHHHHHHHHHHHHc-----CCCEEEChhhhCCCCcHHHHHHHHHhhcCCc---ceEEEe
Confidence 4899999999997 4653 4677888888888665 599999999 4 5999999999975444 555555
Q ss_pred eecccccC---CCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHH
Q 020082 76 RGLTKWVP---PPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTER 152 (331)
Q Consensus 76 ~~~~k~~~---~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~ 152 (331)
|+.....+ ...+.+++.+++++++||+|||+||||+|++|||++..+ ++++|++|++|+++||||+||||||++++
T Consensus 84 K~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 162 (337)
T 3v0s_A 84 KFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVP-IEITMGELXXLVEEGKIXYVGLSEASPDT 162 (337)
T ss_dssp EECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHH
T ss_pred eeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCC-HHHHHHHHHHHHHCCCeeEEeccCCCHHH
Confidence 55432211 112568999999999999999999999999999998887 89999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhh
Q 020082 153 LRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRM 232 (331)
Q Consensus 153 l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
++++.+. .+++++|++||++++..+.+++++|+++||++++|+||++|+|+|+.... ..|.++.+...+.+.
T Consensus 163 l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~--~~~~~~~~~~~~~~~----- 234 (337)
T 3v0s_A 163 IRRAHAV-HPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKE--SLPENSVLTSHPRFV----- 234 (337)
T ss_dssp HHHHHHH-SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC----------------------
T ss_pred HHHHhcc-CCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCC--CCCCcchhhcccccc-----
Confidence 9999875 47899999999999988789999999999999999999999999873221 112211111111110
Q ss_pred hhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHh
Q 020082 233 VDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVT 312 (331)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~ 312 (331)
....+.+.+.++.++++|+++|+|++|+||+|++++|.|+++|+|+++ ++||++|+++++.+||++++++|+++.
T Consensus 235 ---~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~ 309 (337)
T 3v0s_A 235 ---GENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTK--IKNLHNNVGALKVXLTKEDLKEISDAV 309 (337)
T ss_dssp -------------CHHHHHHHHHTTSCHHHHHHHHHHTTCTTBCCCCCCSC--HHHHHHHHHGGGCCCCHHHHHHHHHTC
T ss_pred ---hhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEcCCCC--HHHHHHHHHHhccCCCHHHHHHHHHhh
Confidence 011245566778999999999999999999999999999999999999 999999999999999999999999998
Q ss_pred hcC
Q 020082 313 KKG 315 (331)
Q Consensus 313 ~~~ 315 (331)
...
T Consensus 310 ~~~ 312 (337)
T 3v0s_A 310 PLD 312 (337)
T ss_dssp C--
T ss_pred ccc
Confidence 654
No 8
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=3.1e-58 Score=427.02 Aligned_cols=297 Identities=20% Similarity=0.288 Sum_probs=234.7
Q ss_pred cccceeeeccc-cCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC--C----chHHHHHHHHhhhhcCCCccchhee
Q 020082 3 SVERDVADEWR-VGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD--G----PAEDLYGIFINRVRRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~-~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~--g----~sE~~lG~~l~~~~~~~~~~~~~~~ 75 (331)
.||+||||||. +|. ..+.+++.++|+.|++. ||||||||+ | .||+.||++|++......+.+++.+
T Consensus 24 ~vs~lglGt~~~~g~--~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~T 96 (346)
T 3n6q_A 24 RLPALSLGLWHNFGH--VNALESQRAILRKAFDL-----GITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIIST 96 (346)
T ss_dssp EEESEEEECSSSCST--TSCHHHHHHHHHHHHHT-----TCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEE
T ss_pred eecCeeecCccccCC--CCCHHHHHHHHHHHHHc-----CCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEE
Confidence 48999999985 443 34667888888888655 599999999 4 4899999999974221111566666
Q ss_pred eecccccCC--CCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHH
Q 020082 76 RGLTKWVPP--PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERL 153 (331)
Q Consensus 76 ~~~~k~~~~--~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l 153 (331)
|+....++. ....+++.+++++++||+||||||||+|++|||++..+ ++++|++|++|+++||||+||||||+++++
T Consensus 97 K~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l 175 (346)
T 3n6q_A 97 KAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTP-MEETASALAHAVQSGKALYVGISSYSPERT 175 (346)
T ss_dssp EECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHH
T ss_pred EecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEEeCCCCHHHH
Confidence 654333322 12348999999999999999999999999999998887 899999999999999999999999999999
Q ss_pred HHHHH----cCCCeeeecccccccccChhh-hHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHH
Q 020082 154 RIILE----NGIPVVSNQVQHSVVDMRPQQ-KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQK 228 (331)
Q Consensus 154 ~~~~~----~~~~~~~vq~~~nl~~~~~~~-~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
+++.+ .+.+++++|++||++++..+. +++++|+++||++++|+||++|+|+|+|.... |. +.+...+.. .
T Consensus 176 ~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~---~~-~~r~~~~~~-~ 250 (346)
T 3n6q_A 176 QKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGI---PQ-DSRMHREGN-K 250 (346)
T ss_dssp HHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC--------------------
T ss_pred HHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCccCCC---CC-ccccccccc-c
Confidence 88764 247899999999999988776 89999999999999999999999999986532 21 111111100 0
Q ss_pred HHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchh-cCCCCHHHHHH
Q 020082 229 YKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNS 307 (331)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~-~~~L~~~~~~~ 307 (331)
+...... .-.+.+.+.++.+.++|+++|+|++|+||+|++++|.|+++|+|+++ ++||++|++++ +.+||++++++
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~--~~~l~en~~a~~~~~Ls~e~~~~ 327 (346)
T 3n6q_A 251 VRGLTPK-MLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASR--AEQLEENVQALNNLTFSTKELAQ 327 (346)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEECCSS--HHHHHHHHGGGGCCCCCHHHHHH
T ss_pred ccccchh-hhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcCCCC--HHHHHHHHhhccCCCCCHHHHHH
Confidence 0000000 01245677889999999999999999999999999999999999999 99999999998 68999999999
Q ss_pred HHHHhhcC
Q 020082 308 IQEVTKKG 315 (331)
Q Consensus 308 l~~~~~~~ 315 (331)
|+++.+..
T Consensus 328 i~~~~~~~ 335 (346)
T 3n6q_A 328 IDQHIADG 335 (346)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 99999763
No 9
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-58 Score=432.72 Aligned_cols=296 Identities=17% Similarity=0.218 Sum_probs=237.5
Q ss_pred cccceeeecc-ccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheeee
Q 020082 3 SVERDVADEW-RVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRG 77 (331)
Q Consensus 3 ~vS~l~lGt~-~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~~ 77 (331)
.||+|||||| .+|. ..+.+++.++|+.|++. ||||||||+ |.||++||++|++.+..|. .+++.+|+
T Consensus 48 ~vs~iglGt~~~~g~--~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~-~v~I~TK~ 119 (367)
T 3lut_A 48 RVSCLGLGTWVTFGG--QITDEMAEHLMTLAYDN-----GINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS-SLVITTKI 119 (367)
T ss_dssp EEESEEEECTTCCCC--CSCHHHHHHHHHHHHHT-----TCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG-GCEEEEEE
T ss_pred cccceeECCccccCC--CCCHHHHHHHHHHHHHc-----CCCEEECccccCCCchHHHHHHHHHhCCCCCc-eEEEEecc
Confidence 5899999998 4553 35667888888888655 599999999 6789999999997632222 55666665
Q ss_pred ccccc-CCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHH
Q 020082 78 LTKWV-PPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRII 156 (331)
Q Consensus 78 ~~k~~-~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~ 156 (331)
..... ....+++++.+++++++||+|||+||||+|++|||++..+ ++++|++|++|+++||||+||||||++++++++
T Consensus 120 ~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 198 (367)
T 3lut_A 120 FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEA 198 (367)
T ss_dssp SBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred ccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHH
Confidence 32111 1123578999999999999999999999999999998887 899999999999999999999999999999988
Q ss_pred HH----cC-CCeeeecccccccccCh-hhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHH
Q 020082 157 LE----NG-IPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYK 230 (331)
Q Consensus 157 ~~----~~-~~~~~vq~~~nl~~~~~-~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
.. .+ ++|+++|++||++++.. +.+++++|+++||++++|+||++|+|+|++.... |. ..+........+.
T Consensus 199 ~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~~~---~~-~~r~~~~~~~~~~ 274 (367)
T 3lut_A 199 YSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI---PP-YSRASLKGYQWLK 274 (367)
T ss_dssp HHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC---CT-TSGGGSTTCHHHH
T ss_pred HHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCCCC---CC-ccccccccccccc
Confidence 74 23 68999999999999876 5589999999999999999999999999987532 21 1111111111110
Q ss_pred hhhhccCC--chhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcC--CCCHHHHH
Q 020082 231 RMVDAWGG--WSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVN 306 (331)
Q Consensus 231 ~~~~~~~~--~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~--~L~~~~~~ 306 (331)
.++.. .......++.++++|+++|+|++|+||+|+++++.|+++|+|+++ ++||++|+++++. +|++++++
T Consensus 275 ---~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~~~Ls~e~~~ 349 (367)
T 3lut_A 275 ---DKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASN--AEQLMENIGAIQVLPKLSSSIVH 349 (367)
T ss_dssp ---HHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEECCSS--HHHHHHHHTHHHHGGGCCHHHHH
T ss_pred ---ccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecCCCC--HHHHHHHHHhhcccCCCCHHHHH
Confidence 00000 123456678999999999999999999999999999999999999 9999999999986 89999999
Q ss_pred HHHHHhhcCC
Q 020082 307 SIQEVTKKGK 316 (331)
Q Consensus 307 ~l~~~~~~~~ 316 (331)
+|+++....+
T Consensus 350 ~i~~~~~~~~ 359 (367)
T 3lut_A 350 EIDSILGNKP 359 (367)
T ss_dssp HHHHHHCCCC
T ss_pred HHHHHHhcCC
Confidence 9999997644
No 10
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=8.1e-58 Score=424.60 Aligned_cols=288 Identities=22% Similarity=0.302 Sum_probs=235.1
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-C----------chHHHHHHHHhhh-hcCCCcc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-G----------PAEDLYGIFINRV-RRERPPE 70 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g----------~sE~~lG~~l~~~-~~~~~~~ 70 (331)
.||+||||||+||. ..+.+++.++|+.|++. ||||||||+ + .||++||++|++. +|+ .
T Consensus 12 ~vs~lglGt~~~g~--~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~~R~---~ 81 (346)
T 1lqa_A 12 EVSTLGLGTMTFGE--QNSEADAHAQLDYAVAQ-----GINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSRE---K 81 (346)
T ss_dssp EEESEEEECTTBTT--TBCHHHHHHHHHHHHHT-----TCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHCCGG---G
T ss_pred eecCeeEEccccCC--CCCHHHHHHHHHHHHHc-----CCCEEEChhhcCCCccCCCCCccHHHHHHHHhhcCCCc---e
Confidence 58999999998874 34667888888888665 599999999 3 7999999999975 343 5
Q ss_pred chheeeeccc------ccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCC---------------C--CCchHHHH
Q 020082 71 FLDKVRGLTK------WVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD---------------Y--SNPGYLDA 127 (331)
Q Consensus 71 ~~~~~~~~~k------~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d---------------~--~~~~~~e~ 127 (331)
+++.+|+... +.....+++++.+++++++||+||||||||+|+||||+ + ..+ ++++
T Consensus 82 ~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~-~~e~ 160 (346)
T 1lqa_A 82 LIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS-LLDT 160 (346)
T ss_dssp CEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC-HHHH
T ss_pred EEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC-HHHH
Confidence 5566655421 11111347899999999999999999999999999993 3 344 7899
Q ss_pred HHHHHHHHHcCcccEEecCcccHHHHHHHHH----cC-CCeeeecccccccccChhhhHHHHHHHhCCeEEEcccccccc
Q 020082 128 LNHLTDLKEEGKIKTVALTNFDTERLRIILE----NG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 202 (331)
Q Consensus 128 ~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~----~~-~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~ 202 (331)
|++|++|+++||||+||||||++++++++.+ .+ .+++++|++||++++..+.+++++|+++||++++|+||++|+
T Consensus 161 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~ 240 (346)
T 1lqa_A 161 LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT 240 (346)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGG
T ss_pred HHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhh
Confidence 9999999999999999999999998877653 24 479999999999999888899999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCchhHHHHhhhhcc--CCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeec
Q 020082 203 LSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAW--GGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG 280 (331)
Q Consensus 203 L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G 280 (331)
|+|+|.... .|.+. + .. ....+ ...+.+.+.++.+.++|+++|+|++|+||+|++++|.|+++|+|
T Consensus 241 L~g~~~~~~--~p~~~-~-----~~----~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g 308 (346)
T 1lqa_A 241 LTGKYLNGA--KPAGA-R-----NT----LFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLG 308 (346)
T ss_dssp GGTTTGGGC--CCTTC-H-----HH----HCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEEC
T ss_pred hcCcccccc--CCCcc-h-----hh----cchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeC
Confidence 999886532 12110 0 00 00011 11245677889999999999999999999999999999999999
Q ss_pred ccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcC
Q 020082 281 VRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 315 (331)
Q Consensus 281 ~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~ 315 (331)
+++ ++||++|+++++.+||++++++|+++....
T Consensus 309 ~~~--~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 341 (346)
T 1lqa_A 309 ATT--MDQLKTNIESLHLELSEDVLAEIEAVHQVY 341 (346)
T ss_dssp CSS--HHHHHHHHGGGGCCCCHHHHHHHHHHHHHS
T ss_pred CCC--HHHHHHHHHhccCCCCHHHHHHHHHHHhhc
Confidence 999 999999999999999999999999998653
No 11
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=6.7e-58 Score=419.46 Aligned_cols=269 Identities=17% Similarity=0.175 Sum_probs=230.3
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheeeec
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGL 78 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~~~ 78 (331)
.||+||||||++|.|+ .+.+++.++|+.|++. ||||||||+ |.||+.||++|++.+..|. .+++.+|+.
T Consensus 34 ~vs~lglGt~~~g~~~-~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~-~v~I~TK~~ 106 (319)
T 1ur3_M 34 EFSRFVMGYWRLMDWN-MSARQLVSFIEEHLDL-----GVTTVDHADIYGGYQCEAAFGEALKLAPHLRE-RMEIVSKCG 106 (319)
T ss_dssp EEESSEEECTTTTTTT-CCHHHHHHHHHHHHHH-----TCCEEECCSSTTTTTHHHHHHHHHHHCGGGTT-TCEEEEEEC
T ss_pred ccccccEeccccCCCC-CCHHHHHHHHHHHHHc-----CCCeEEcccccCCCcHHHHHHHHHHhCCCCCC-eEEEEEeec
Confidence 5899999999998763 4667888888888666 599999999 4799999999997532222 455555554
Q ss_pred ccccC------CCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHH
Q 020082 79 TKWVP------PPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTER 152 (331)
Q Consensus 79 ~k~~~------~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~ 152 (331)
....+ ...+.+++.+++++++||+|||+||||+|++|||++..+ .+++|++|++|+++||||+||||||++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 185 (319)
T 1ur3_M 107 IATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMD-ADEVADAFKHLHQSGKVRHFGVSNFTPAQ 185 (319)
T ss_dssp EECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCC-HHHHHHHHHHHHHTTSBCCEEEESCCHHH
T ss_pred cCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHH
Confidence 32111 012578999999999999999999999999999998777 79999999999999999999999999999
Q ss_pred HHHHHHc-CCCeeeecccccccccCh-hhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHH
Q 020082 153 LRIILEN-GIPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYK 230 (331)
Q Consensus 153 l~~~~~~-~~~~~~vq~~~nl~~~~~-~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
++++.+. +.+|+++|++||++++.. +.+++++|+++||++++|+||++|+|.+.
T Consensus 186 l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~------------------------ 241 (319)
T 1ur3_M 186 FALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND------------------------ 241 (319)
T ss_dssp HHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC------------------------
T ss_pred HHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCC------------------------
Confidence 9998874 458999999999999875 46799999999999999999999987420
Q ss_pred hhhhccCCchhHHHHHHHHHHHHHHcCCCH-HHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHH
Q 020082 231 RMVDAWGGWSQFQVLLQTLKRIASKHGVSI-PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQ 309 (331)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~-aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~ 309 (331)
+......+.++++|+++|+|+ +|+||+|++++|.++++|+|+++ ++||++|+++++++||++++++|+
T Consensus 242 ---------~~~~~~~~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G~~~--~~~l~en~~a~~~~Ls~ee~~~l~ 310 (319)
T 1ur3_M 242 ---------DYFQPLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGK--IERVRAAVEAETLKMTRQQWFRIR 310 (319)
T ss_dssp ---------GGGHHHHHHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEECCSC--HHHHHHHHGGGGCCCCHHHHHHHH
T ss_pred ---------chhHHHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeCCCC--HHHHHHHHHhccCCCCHHHHHHHH
Confidence 012345689999999999999 99999999999999999999999 999999999999999999999999
Q ss_pred HHhhc
Q 020082 310 EVTKK 314 (331)
Q Consensus 310 ~~~~~ 314 (331)
++.+.
T Consensus 311 ~~~~~ 315 (319)
T 1ur3_M 311 KAALG 315 (319)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 98854
No 12
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=5.4e-58 Score=426.98 Aligned_cols=303 Identities=16% Similarity=0.212 Sum_probs=241.5
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheeeec
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGL 78 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~~~ 78 (331)
.||+||||||+||. ..+.+++.++|+.|++. ||||||||+ |.||++||++|++.+..+. .+++.+|+
T Consensus 37 ~ip~lglGt~~~g~--~~~~~~~~~~l~~Al~~-----Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~-~v~I~TK~- 107 (360)
T 2bp1_A 37 PRVASVLGTMEMGR--RMDAPASAAAVRAFLER-----GHTELDTAFMYSDGQSETILGGLGLGLGGGDC-RVKIATKA- 107 (360)
T ss_dssp -CCEEEEECTTBTT--TBCHHHHHHHHHHHHHT-----TCCEEECCTTGGGGHHHHHHHTSCCCTTSTTC-CCEEEEEE-
T ss_pred CCCCEEECchhhCC--CCCHHHHHHHHHHHHHc-----CCCEEECccccCCCChHHHHHHHHhhccCCCC-eEEEEeee-
Confidence 48999999999985 23667888888888665 599999999 5899999999974211112 34555554
Q ss_pred ccccCC-CCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHH
Q 020082 79 TKWVPP-PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIIL 157 (331)
Q Consensus 79 ~k~~~~-~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~ 157 (331)
++. ..+++++.+++++++||+|||+||||+|++|||+...+ ++++|++|++|+++||||+||||||+.++++++.
T Consensus 108 ---~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~ 183 (360)
T 2bp1_A 108 ---NPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTP-VEETLHACQRLHQEGKFVELGLSNYASWEVAEIC 183 (360)
T ss_dssp ---CCCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred ---cCCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHH
Confidence 222 22578999999999999999999999999999998877 8999999999999999999999999999998877
Q ss_pred H----cC-CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCch-hHHHHh
Q 020082 158 E----NG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPS-LQKYKR 231 (331)
Q Consensus 158 ~----~~-~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 231 (331)
+ .+ ++++++|++||++++..+.+++++|+++||++++|+||++|+|+|++............++.... ...+..
T Consensus 184 ~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 2bp1_A 184 TLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAETYRN 263 (360)
T ss_dssp HHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGTTTCCSBTTBSSTTHHHHHH
T ss_pred HHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEecccccCcccCCccCcCcccccccccccccccchhhhh
Confidence 5 24 68999999999999988789999999999999999999999999987643211000111221110 011111
Q ss_pred hhhccCCchhHHHHHHHHHHHHHH----cCCCHHHHHHHHHHhCCCc-----eeEeecccCCcHhHHHHhhchhcC-CCC
Q 020082 232 MVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVRYILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLD 301 (331)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~ia~~----~g~s~aq~Al~~~l~~~~v-----~~~i~G~~~~~~~~l~e~~~a~~~-~L~ 301 (331)
.+. .+.+.+.++.++++|++ +|+|++|+||+|++++|.| +++|+|+++ ++||++|+++++. +|+
T Consensus 264 ---~~~-~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G~~~--~~~l~enl~a~~~~~L~ 337 (360)
T 2bp1_A 264 ---RFW-KEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSS--LEQLEQNLAATEEGPLE 337 (360)
T ss_dssp ---HHC-CHHHHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEECCSS--HHHHHHHHHHHTSCCCC
T ss_pred ---ccc-chhHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEECCCC--HHHHHHHHHhcCCCCCC
Confidence 111 13455678899999999 9999999999999999998 799999999 9999999999987 899
Q ss_pred HHHHHHHHHHhhcCCCCCCcccccccccc
Q 020082 302 EDDVNSIQEVTKKGKDLLGVIGDCGDEYR 330 (331)
Q Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (331)
+++++.|+++.... .++|++|++
T Consensus 338 ~e~~~~l~~~~~~~------~~~~~~~~~ 360 (360)
T 2bp1_A 338 PAVVDAFNQAWHLV------AHECPNYFR 360 (360)
T ss_dssp HHHHHHHHHHHHHH------GGGCCCSCC
T ss_pred HHHHHHHHHHHHhc------cCCcccccC
Confidence 99999999998763 346776654
No 13
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=1.3e-56 Score=410.82 Aligned_cols=270 Identities=19% Similarity=0.271 Sum_probs=221.8
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC----CchHHHHHHHHhhhhcCCCccchheeeec
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD----GPAEDLYGIFINRVRRERPPEFLDKVRGL 78 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~----g~sE~~lG~~l~~~~~~~~~~~~~~~~~~ 78 (331)
.||+||||||++|. +.+++.++|+.|++. |||+||||+ |.||+.||++|+. +|+ .+++.+|+.
T Consensus 32 ~vs~lglGt~~~g~----~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~---~v~I~TK~~ 98 (317)
T 1ynp_A 32 HVSELGFGCMSLGT----DETKARRIMDEVLEL-----GINYLDTADLYNQGLNEQFVGKALKG-RRQ---DIILATKVG 98 (317)
T ss_dssp EEESBCBCSCCCCS----CHHHHHHHHHHHHHT-----TCCEEECSCBTTBCCCHHHHHHHHTT-CGG---GCEEEEEC-
T ss_pred cccCEeEcCcccCC----CHHHHHHHHHHHHHc-----CCCeEECccccCCCchHHHHHHHHhc-CCC---eEEEEeeeC
Confidence 48999999998864 346778888888655 599999999 5699999999987 444 455555554
Q ss_pred ccccC----CCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHH
Q 020082 79 TKWVP----PPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLR 154 (331)
Q Consensus 79 ~k~~~----~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~ 154 (331)
..+.+ ...+.+++.+++++++||+|||+||||+|+||||+...+ ++++|++|++|+++||||+||||||++++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~ 177 (317)
T 1ynp_A 99 NRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDP-IDETIEAFEELKQEGVIRYYGISSIRPNVIK 177 (317)
T ss_dssp --------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHHTSEEEEEEECCCHHHHH
T ss_pred CCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCC-hHHHHHHHHHHHhCCceEEEEecCCCHHHHH
Confidence 32211 123578999999999999999999999999999998777 7999999999999999999999999999999
Q ss_pred HHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhh
Q 020082 155 IILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVD 234 (331)
Q Consensus 155 ~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
++++.. +++++|++||++++.++. ++++|+++||++++|+||++|+|+++ ..+ . ......
T Consensus 178 ~~~~~~-~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~-~~~-----~-~~~~~~----------- 237 (317)
T 1ynp_A 178 EYLKRS-NIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR-PLP-----E-GEGYLN----------- 237 (317)
T ss_dssp HHHHHS-CCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS-CCC-----T-TCCBTT-----------
T ss_pred HHHhcC-CCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC-CCc-----c-cccccc-----------
Confidence 998853 689999999999988765 99999999999999999999999876 110 0 000000
Q ss_pred ccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhc-CCCCHHHHHHHHHHhh
Q 020082 235 AWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM-LSLDEDDVNSIQEVTK 313 (331)
Q Consensus 235 ~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~-~~L~~~~~~~l~~~~~ 313 (331)
.....+.+.+.++|+ |+|++|+||+|++++|.|+++|+|+++ ++||++|+++++ .+||+++++.|+++..
T Consensus 238 -----~~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~~Ls~ee~~~l~~~~~ 308 (317)
T 1ynp_A 238 -----YRYDELKLLRESLPT--DRPLHELALQYCLAHDVVATVAAGASS--IDQVKANVQAVEATPLTAEERQHIQKLAK 308 (317)
T ss_dssp -----BCHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTTEEEEECCCSS--HHHHHHHHHHHTSCCCCHHHHHHHHHHSC
T ss_pred -----ccHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCeEEEeCCCC--HHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 112344578888888 999999999999999999999999999 999999999999 8999999999999986
Q ss_pred cC
Q 020082 314 KG 315 (331)
Q Consensus 314 ~~ 315 (331)
..
T Consensus 309 ~~ 310 (317)
T 1ynp_A 309 AA 310 (317)
T ss_dssp CC
T ss_pred hh
Confidence 54
No 14
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-56 Score=403.52 Aligned_cols=250 Identities=18% Similarity=0.297 Sum_probs=217.0
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||.||||||+++ .+++.++|+.|++. |||+||||+ +.+|+.||++|++.+..|. .+++++| +
T Consensus 33 ~v~~lglGt~~~~------~~~~~~~v~~Al~~-----Gi~~~DTA~~Yg~E~~lG~al~~~~~~R~-~v~I~TK----~ 96 (298)
T 3up8_A 33 NIPALGFGTFRMS------GAEVLRILPQALKL-----GFRHVDTAQIYGNEAEVGEAIQKSGIPRA-DVFLTTK----V 96 (298)
T ss_dssp CEESEEEECTTCC------HHHHHHHHHHHHHH-----TCCEEECCTTTTCHHHHHHHHHHHTCCGG-GCEEEEE----E
T ss_pred ecCCeeEECCcCC------HHHHHHHHHHHHHc-----CCCEEECCCcccCHHHHHHHHHHcCCChH-HEEEEec----c
Confidence 5899999999763 36788888888666 599999999 6699999999997532222 3444444 4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +.+++.+++++++||+|||+||||+|++|||++..+ .+++|++|++|+++||||+||||||++++++++++. +
T Consensus 97 ~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 173 (298)
T 3up8_A 97 WVD--NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVP-MAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSD 173 (298)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCS
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCC-HHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCC
Confidence 332 468999999999999999999999999999998776 899999999999999999999999999999999875 5
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
++++++|++||++.+. .+++++|+++||++++|+||++|.|...
T Consensus 174 ~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~---------------------------------- 217 (298)
T 3up8_A 174 APIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGKVPAD---------------------------------- 217 (298)
T ss_dssp SCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGHHHHC----------------------------------
T ss_pred CCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCccccc----------------------------------
Confidence 6899999999998764 5899999999999999999999975320
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
+.+.++|+++|+|++|+||+|++++|+|+ +|+|+++ ++||++|+++++.+||+++++.|+++..+..
T Consensus 218 ------~~l~~ia~~~g~s~aqvaL~w~l~~p~v~-~I~g~~~--~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~ 284 (298)
T 3up8_A 218 ------PLLTEIGGRHGKTAAQVALRWLVQQQDVI-VLSKTAT--EARLKENFAIFDFALTREEMAAVRELARPNG 284 (298)
T ss_dssp ------HHHHHHHHHHTCCHHHHHHHHHHTSTTEE-EEECCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCCTTC
T ss_pred ------chHHHHHHHcCCCHHHHHHHHHHHCCCcE-EEECCCC--HHHHHHHHHhCCCCCCHHHHHHHHHHhccCC
Confidence 68999999999999999999999999885 8999999 9999999999999999999999999954443
No 15
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=2e-55 Score=398.11 Aligned_cols=252 Identities=19% Similarity=0.269 Sum_probs=213.9
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||.||||||+++ +.+++.++|+.|++. ||||||||+ +.||+.+|++++.....+. .+ ++.+|.
T Consensus 23 ~ip~lGlGtw~~~-----d~~e~~~~v~~Al~~-----Gin~~DTA~~YgsE~~vG~~l~~~~~~r~-~~----~i~tk~ 87 (290)
T 4gie_A 23 RMPQLGLGVWRAQ-----DGAETANAVRWAIEA-----GYRHIDTAYIYSNERGVGQGIRESGVPRE-EV----WVTTKV 87 (290)
T ss_dssp EEESBCEECTTCC-----TTHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHCCCGG-GS----EEEEEE
T ss_pred CccceeEECCCCC-----CHHHHHHHHHHHHHc-----CCCEEecccccCCHHHHHHHHHhcCCcch-hc----cccccc
Confidence 4789999998653 457888899988766 599999999 6699999999997543332 33 334443
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. ..+++.+++++++||+||||||||+|++|||+.. + ..++|++|++|+++||||+||||||+++++.++.+. .
T Consensus 88 ~~~--~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~-~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 163 (290)
T 4gie_A 88 WNS--DQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK-K-FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCK 163 (290)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS-S-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCS
T ss_pred ccc--CCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC-c-chHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhcc
Confidence 332 3478999999999999999999999999999864 3 689999999999999999999999999999999875 3
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
+++.++|+++++.. .+.+++++|+++||++++|+||++|.|++.+..
T Consensus 164 ~~~~~~q~~~~~~~--~~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~------------------------------- 210 (290)
T 4gie_A 164 IRPMVNQVELHPLF--QQRTLREFCKQHNIAITAWSPLGSGEEAGILKN------------------------------- 210 (290)
T ss_dssp SCCSEEEEECBTTB--CCHHHHHHHHHTTCEEEEESTTCSSGGGCGGGC-------------------------------
T ss_pred CCCceeeEeccccc--hhHHHHHHHHHcCceEeeecccccccccccchh-------------------------------
Confidence 56777887777644 456899999999999999999999998765432
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
+.+.++|+++|+|++|+||+|++++|.| +|||+++ ++||++|+++++++||++++++|+++.+..+
T Consensus 211 ------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G~~~--~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r 276 (290)
T 4gie_A 211 ------HVLGEIAKKHNKSPAQVVIRWDIQHGIV--TIPKSTN--KGRIQENFNVWDFKLTEEEMRQIDELNEDKR 276 (290)
T ss_dssp ------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred ------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--EEECCCC--HHHHHHHHhhcCCCCCHHHHHHHhccCCCCC
Confidence 6799999999999999999999999865 7999999 9999999999999999999999999876554
No 16
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=2e-55 Score=397.89 Aligned_cols=250 Identities=17% Similarity=0.264 Sum_probs=213.7
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||.+|. .+++.++|+.|++. ||||||||+ +.+|+.+|++|++.+..|. .+++.+| +
T Consensus 20 ~v~~lglGt~~~~~-----~~~~~~~v~~Al~~-----G~~~~DTA~~Yg~E~~vG~al~~~~~~R~-~~~I~TK----~ 84 (288)
T 4f40_A 20 KMPQFGLGVWQSPA-----GEVTENAVKWALCA-----GYRHIDTAAIYKNEESVGAGLRASGVPRE-DVFITTK----L 84 (288)
T ss_dssp EEESBCEECTTCCT-----THHHHHHHHHHHHT-----TCCEEECCGGGTCHHHHHHHHHHHTCCGG-GCEEEEE----E
T ss_pred eecceeEECCcCCC-----cHHHHHHHHHHHHc-----CCCeEECcccccCHHHHHHHHHhcCCChh-hEEEEEe----c
Confidence 48999999998764 36777888888555 599999999 6699999999997432222 3444444 4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC-------CchHHHHHHHHHHHHHcCcccEEecCcccHHHHH
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLR 154 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~-------~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~ 154 (331)
++. +.+++.+++++++||+|||+||||+|++|||+.. .+ .+++|++|++|+++||||+||||||++++++
T Consensus 85 ~~~--~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~ 161 (288)
T 4f40_A 85 WNT--EQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKK-YLDSWRAFEQLYKEKKVRAIGVSNFHIHHLE 161 (288)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCH-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHH
T ss_pred CCC--cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCccccccccc-HHHHHHHHHHHHHcCCccEEEeccCCHHHHH
Confidence 332 3579999999999999999999999999999863 34 7899999999999999999999999999999
Q ss_pred HHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhh
Q 020082 155 IILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMV 233 (331)
Q Consensus 155 ~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
++.+. .++++++|++||++++. .+++++|+++||++++|+||++|.|.+.
T Consensus 162 ~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~--------------------------- 212 (288)
T 4f40_A 162 DVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLSN--------------------------- 212 (288)
T ss_dssp HHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGGC---------------------------
T ss_pred HHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCccccc---------------------------
Confidence 99875 46899999999999876 4799999999999999999999987531
Q ss_pred hccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhh
Q 020082 234 DAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 313 (331)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~ 313 (331)
+.+.++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+++++.+||++++++|+++.+
T Consensus 213 -------------~~l~~ia~~~g~t~aqvaL~w~l~~~--~~~i~g~~~--~~~l~en~~~~~~~L~~ee~~~i~~l~~ 275 (288)
T 4f40_A 213 -------------PILSAIGAKYNKTAAQVILRWNIQKN--LITIPKSVH--RERIEENADIFDFELGAEDVMSIDALNT 275 (288)
T ss_dssp -------------HHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCSS--HHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred -------------HHHHHHHHHhCCCHHHHHHHHHHhCC--CeEeeCCCC--HHHHHHHhhhcCCCCCHHHHHHHHhhcc
Confidence 67899999999999999999999998 579999999 9999999999999999999999999986
Q ss_pred cCC
Q 020082 314 KGK 316 (331)
Q Consensus 314 ~~~ 316 (331)
..+
T Consensus 276 ~~r 278 (288)
T 4f40_A 276 NSR 278 (288)
T ss_dssp CCC
T ss_pred CCc
Confidence 654
No 17
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=3.3e-55 Score=393.96 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=214.6
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||+++ +.+++.++|+.|++. ||||||||+ +.+|+.+|++|++.+..|. .+++.+| .
T Consensus 16 ~v~~lglGt~~~~-----~~~~~~~~l~~Al~~-----G~~~~DTA~~Yg~E~~lG~al~~~~~~R~-~~~i~TK----~ 80 (276)
T 3f7j_A 16 EMPWFGLGVFKVE-----NGNEATESVKAAIKN-----GYRSIDTAAIYKNEEGVGIGIKESGVARE-ELFITSK----V 80 (276)
T ss_dssp EEESBCEECTTCC-----TTHHHHHHHHHHHHT-----TCCEEECCGGGSCHHHHHHHHHHHCSCGG-GCEEEEE----E
T ss_pred EecceeecCCcCC-----CHHHHHHHHHHHHHc-----CCCEEECcCcccCHHHHHHHHhhcCCCcc-cEEEEEe----e
Confidence 4899999999764 457788888888655 599999999 6679999999996432222 3444444 4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +.+++.+++++++||+|||+||||+|++|||++.. .+++|++|++|+++||||+||||||++++++++++. +
T Consensus 81 ~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~--~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 156 (276)
T 3f7j_A 81 WNE--DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAE 156 (276)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCS
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc--HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcC
Confidence 332 35799999999999999999999999999998754 689999999999999999999999999999999874 5
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
+++.++|++||++.+. .+++++|+++||++++|+||++|.|.+.
T Consensus 157 ~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~---------------------------------- 200 (276)
T 3f7j_A 157 IKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN---------------------------------- 200 (276)
T ss_dssp SCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC----------------------------------
T ss_pred CCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCC----------------------------------
Confidence 7889999999998764 5899999999999999999999976421
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
+.+.++|+++|+|++|+||+|+++++.| +|+|+++ ++||++|+++++.+||+++++.|+++.+..+
T Consensus 201 ------~~l~~ia~~~g~t~aqval~w~l~~~~v--~i~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r 266 (276)
T 3f7j_A 201 ------EVLTQIAEKHNKSVAQVILRWDLQHGVV--TIPKSIK--EHRIIENADIFDFELSQEDMDKIDALNKDER 266 (276)
T ss_dssp ------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCCS--HHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred ------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--EeeCCCC--HHHHHHHHhhCCCCCCHHHHHHHHhhccCCc
Confidence 6899999999999999999999999865 8999999 9999999999999999999999999987654
No 18
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=2.4e-55 Score=395.61 Aligned_cols=245 Identities=18% Similarity=0.285 Sum_probs=210.4
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||++ +.+++.++|+.|++. ||||||||+ +.+|+.+|++|++.+..|. .+++.+| +
T Consensus 36 ~v~~lglGt~~~------~~~~~~~~v~~Al~~-----Gi~~~DTA~~Yg~E~~lG~al~~~~~~R~-~~~i~TK----~ 99 (283)
T 3o0k_A 36 HIPQLGYGVWQI------SNDEAVSAVSEALKA-----GYRHIDTATIYGNEEGVGKAINGSGIARA-DIFLTTK----L 99 (283)
T ss_dssp EEESBCEECCSC------CHHHHHHHHHHHHHH-----TCCEEECCGGGSCHHHHHHHHHTSSSCGG-GCEEEEE----E
T ss_pred EECCeeEECccC------CHHHHHHHHHHHHHc-----CCCEEECcccccCHHHHHHHHHHcCCCcc-cEEEEEc----c
Confidence 489999999975 357788888888666 599999999 5579999999997432222 3444444 4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +.+++.+++++++||+|||+||||+|++|||++.....+++|++|++|+++||||+||||||++++++++++. +
T Consensus 100 ~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 177 (283)
T 3o0k_A 100 WNS--DQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESG 177 (283)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHS
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCC
Confidence 332 2478999999999999999999999999999976333789999999999999999999999999999999874 5
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
++++++|++||++.+. .+++++|+++||++++|+||++|.|...
T Consensus 178 ~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~---------------------------------- 221 (283)
T 3o0k_A 178 VTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLED---------------------------------- 221 (283)
T ss_dssp CCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTTC----------------------------------
T ss_pred CCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCccccc----------------------------------
Confidence 7789999999998764 5799999999999999999999976320
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHH
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEV 311 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~ 311 (331)
+.+.++|+++|+|++|+||+|+++++.| +|+|+++ ++||++|+++++.+||++++++|+++
T Consensus 222 ------~~l~~ia~~~g~t~aqvaL~w~l~~~~v--~I~g~~~--~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 222 ------PTLKSIAEKHAKSVAQIILRWHIETGNI--VIPKSIT--PARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp ------HHHHHHHHHHTSCHHHHHHHHHHHHTCE--ECCCCCS--HHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred ------hHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEeCCCC--HHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 6899999999999999999999999976 7999999 99999999999999999999999865
No 19
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=6.6e-55 Score=397.18 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=214.7
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||.++ +.+++.++|+.|++. ||||||||+ +.+|+.||++|++.+..|. .+++.+ |+
T Consensus 50 ~v~~lglGt~~~~-----~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~E~~lG~al~~~~~~R~-~v~I~T----K~ 114 (310)
T 3b3e_A 50 EMPWFGLGVFKVE-----NGNEATESVKAAIKN-----GYRSIDTAAIYKNEEGVGIGIKESGVARE-ELFITS----KV 114 (310)
T ss_dssp EEESBCEECTTCC-----TTHHHHHHHHHHHHT-----TCCEEECCGGGSCHHHHHHHHHHSSSCGG-GCEEEE----EE
T ss_pred eeCceeeeCCcCC-----CHHHHHHHHHHHHHc-----CCCEEECCCccCCHHHHHHHHHhcCCCcc-eEEEEE----eC
Confidence 4889999999763 457788888888655 599999999 6679999999996422222 344444 44
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +.+++.+++++++||+|||+||||+|++|||+... .+++|++|++|+++||||+||||||++++++++++. +
T Consensus 115 ~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~--~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 190 (310)
T 3b3e_A 115 WNE--DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAE 190 (310)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCS
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc--HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcC
Confidence 332 35799999999999999999999999999998754 689999999999999999999999999999999874 4
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
++++++|++||++.+. .+++++|+++||++++|+||++|.|.+.
T Consensus 191 ~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~---------------------------------- 234 (310)
T 3b3e_A 191 IKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN---------------------------------- 234 (310)
T ss_dssp SCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC----------------------------------
T ss_pred CCcceeeeeccCccCC--HHHHHHHHHcCCEEEEeccccCCCcCCC----------------------------------
Confidence 7889999999998764 5899999999999999999999976421
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
+.+.++|+++|+|++|+||+|+++++.| +|+|+++ ++||++|+++++++||++++++|+++.+..+
T Consensus 235 ------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~gs~~--~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r 300 (310)
T 3b3e_A 235 ------EVLTQIAEKHNKSVAQVILRWDLQHGVV--TIPKSIK--EHRIIENADIFDFELSQEDMDKIDALNKDER 300 (310)
T ss_dssp ------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCCS--HHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred ------HHHHHHHHHhCCCHHHHHHHHHHcCCCe--EEeCCCC--HHHHHHHHHhccCCCCHHHHHHHHhhhhCCc
Confidence 6899999999999999999999999865 8999999 9999999999999999999999999986654
No 20
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=1.1e-54 Score=391.60 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=212.9
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||+++ .+++.++|+.|++. ||||||||+ +.+|+.||++|++.+..|. .+++.+ |.
T Consensus 21 ~v~~lglGt~~~~------~~~~~~~v~~Al~~-----Gi~~iDTA~~Yg~E~~lG~al~~~~~~R~-~v~i~T----K~ 84 (283)
T 2wzm_A 21 TLPVVGIGVGELS------DSEAERSVSAALEA-----GYRLIDTAAAYGNEAAVGRAIAASGIPRD-EIYVTT----KL 84 (283)
T ss_dssp EEESEEEECTTCC------HHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHTCCCGG-GCEEEE----EE
T ss_pred EEcceeEECCCCC------hHHHHHHHHHHHHc-----CCCEEECCCcccCHHHHHHHHHhcCCCcc-cEEEEe----cc
Confidence 4899999999764 26788888888666 599999999 5589999999986321121 344444 44
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +++++.+++++++||+|||+||||+|++|||++.....+++|++|++|+++||||+||||||++++++++++. +
T Consensus 85 ~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 162 (283)
T 2wzm_A 85 ATP--DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTY 162 (283)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHC
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcC
Confidence 332 3589999999999999999999999999999874223789999999999999999999999999999999874 5
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
++|+++|++||++++. .+++++|+++||++++|+||++|.|..
T Consensus 163 ~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~----------------------------------- 205 (283)
T 2wzm_A 163 FTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLD----------------------------------- 205 (283)
T ss_dssp CCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGG-----------------------------------
T ss_pred CCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccc-----------------------------------
Confidence 7889999999999876 479999999999999999999985421
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
.+.+.++|+++|+|++|+||+|+++++ + ++|+|+++ ++||++|+++++.+|++++++.|+++....+
T Consensus 206 -----~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g~~~--~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~ 272 (283)
T 2wzm_A 206 -----HPAVTAIAEAHGRTAAQVLLRWSIQLG-N-VVISRSAN--PERIASNLDVFGFELTADEMETLNGLDDGTR 272 (283)
T ss_dssp -----CHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EEEECCSS--HHHHHHHHCCSSCCCCHHHHHHHHTCCCCCC
T ss_pred -----hHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEeCCCC--HHHHHHHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 067899999999999999999999996 4 79999999 9999999999999999999999999886543
No 21
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.2e-54 Score=390.82 Aligned_cols=249 Identities=16% Similarity=0.262 Sum_probs=213.0
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||+++ +.+++.++|+.|++. |||+||||+ +.+|+.+|++|++.+..|. .++ +.||.
T Consensus 19 ~v~~lglGt~~~~-----~~~~~~~~v~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~R~-~~~----i~TK~ 83 (281)
T 1vbj_A 19 MMPVLGFGMWKLQ-----DGNEAETATMWAIKS-----GYRHIDTAAIYKNEESAGRAIASCGVPRE-ELF----VTTKL 83 (281)
T ss_dssp EEESBCEECTTCC-----TTHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHSSSCGG-GCE----EEEEE
T ss_pred eecCeeEECCcCC-----CHHHHHHHHHHHHHc-----CCCEEECCcccCCHHHHHHHHHhcCCChh-HEE----EEecc
Confidence 4899999999864 347788888888666 599999999 5589999999996321121 344 44444
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +.+++.+++++++||+|||+||||+|++|||+ ..+ .+++|++|++|+++||||+||||||++++++++++. +
T Consensus 84 ~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~-~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 159 (281)
T 1vbj_A 84 WNS--DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDK-FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCK 159 (281)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCS
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCC-HHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCC
Confidence 332 35899999999999999999999999999998 555 789999999999999999999999999999999975 4
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
++++++|++||++++. .+++++|+++||++++|+||++|.+..
T Consensus 160 ~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~----------------------------------- 202 (281)
T 1vbj_A 160 VAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVE----------------------------------- 202 (281)
T ss_dssp SCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTT-----------------------------------
T ss_pred CCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCC-----------------------------------
Confidence 6789999999998875 479999999999999999999984310
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
.+.++++|+++|+|++|+||+|+++++ + ++|+|+++ ++||++|+++++.+||++++++|+++....+
T Consensus 203 -----~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g~~~--~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 269 (281)
T 1vbj_A 203 -----DARLKAIGGKYGKTAAQVMLRWEIQAG-V-ITIPKSGN--EARIKENGNIFDFELTAEDIQVIDGMNAGHR 269 (281)
T ss_dssp -----CHHHHHHHHTTTCCHHHHHHHHHHHTT-C-EECCBCSC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred -----CHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEecCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhccCC
Confidence 067899999999999999999999995 4 79999999 9999999999999999999999999986543
No 22
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=7.7e-55 Score=391.92 Aligned_cols=248 Identities=15% Similarity=0.226 Sum_probs=208.2
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh--hcCCCccchheeeecc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLT 79 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~--~~~~~~~~~~~~~~~~ 79 (331)
.||+||||||+++ .+++.++|+.|++. ||||||||+ +.+|+.||++|++. +|+ .+ ++.|
T Consensus 13 ~v~~lglGt~~~~------~~~~~~~l~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~R~---~~----~i~T 74 (278)
T 1hw6_A 13 SIPQLGYGVFKVP------PADTQRAVEEALEV-----GYRHIDTAAIYGNEEGVGAAIAASGIARD---DL----FITT 74 (278)
T ss_dssp EEESBCEECCSCC------GGGHHHHHHHHHHH-----TCCEEECGGGTTCCHHHHHHHHHHCCCGG---GC----EEEE
T ss_pred ccCCeeEECCcCC------hHHHHHHHHHHHHc-----CCCEEECcccccCHHHHHHHHHHcCCChh---hE----EEEE
Confidence 4899999999764 26788888888666 599999999 66899999999964 333 34 4444
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC-CchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHH
Q 020082 80 KWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE 158 (331)
Q Consensus 80 k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~-~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~ 158 (331)
|.++. +.+++.+++++++||+|||+||||+|++|||++. .+ .+++|++|++|+++||||+||||||++++++++++
T Consensus 75 K~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~ 151 (278)
T 1hw6_A 75 KLWND--RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADN-YVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVA 151 (278)
T ss_dssp EECCC-------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSS-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHH
T ss_pred eeCCC--CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCC-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHH
Confidence 44432 3578999999999999999999999999999874 45 78999999999999999999999999999999987
Q ss_pred c-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccC
Q 020082 159 N-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWG 237 (331)
Q Consensus 159 ~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
. +++|+++|++||++++. .+++++|+++||++++|+||++|. +++. .
T Consensus 152 ~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~--~~~~-------------~--------------- 199 (278)
T 1hw6_A 152 ATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK--YDLF-------------G--------------- 199 (278)
T ss_dssp HHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS--SCCT-------------T---------------
T ss_pred hcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC--cccc-------------c---------------
Confidence 4 57789999999999876 479999999999999999999983 1100 0
Q ss_pred CchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcC
Q 020082 238 GWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 315 (331)
Q Consensus 238 ~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~ 315 (331)
.+.++++|+++|+|++|+||+|+++++ + ++|+|+++ ++||++|+++++.+||+++++.|+++....
T Consensus 200 --------~~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~~I~g~~~--~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 265 (278)
T 1hw6_A 200 --------AEPVTAAAAAHGKTPAQAVLRWHLQKG-F-VVFPKSVR--RERLEENLDVFDFDLTDTEIAAIDAMDPGD 265 (278)
T ss_dssp --------SHHHHHHHHHHTCCHHHHHHHHHHHTT-C-BBCCCCCS--HHHHHHHHCCSSCCCCHHHHHHHHTTCC--
T ss_pred --------cHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEcCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 057899999999999999999999995 5 79999999 999999999999999999999999987553
No 23
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=2.2e-54 Score=397.72 Aligned_cols=262 Identities=18% Similarity=0.247 Sum_probs=218.4
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||++|. ..+.+++.++|+.|++. |||+||||+ +.+|+.||++|++. +|+ .+++
T Consensus 17 ~v~~lglGt~~~g~--~~~~~~~~~~l~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~---~~~i-- 84 (326)
T 3buv_A 17 SIPIIGLGTYSEPK--STPKGACATSVKVAIDT-----GYRHIDGAYIYQNEHEVGEAIREKIAEGKVRRE---DIFY-- 84 (326)
T ss_dssp EEESBCEECCCCGG--GCCTTHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGG---GCEE--
T ss_pred eeCCeeEcccCCCC--CCCHHHHHHHHHHHHHc-----CCCEEECccccCCHHHHHHHHHHHHhcCCCChh---HeEE--
Confidence 58999999998873 34567888899988766 599999999 55899999999873 333 3444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC-------------------CchHHHHHHHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-------------------NPGYLDALNHLTDLKE 136 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~-------------------~~~~~e~~~~l~~l~~ 136 (331)
.||.++. ..+++.+++++++||+|||+||||+|++|||+.. .+ ++++|++|++|++
T Consensus 85 --~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~ale~l~~ 159 (326)
T 3buv_A 85 --CGKLWAT--NHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSN-LCATWEAMEACKD 159 (326)
T ss_dssp --EEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCC-HHHHHHHHHHHHH
T ss_pred --EeeeCCC--cCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCcccccccccccccc-HHHHHHHHHHHHH
Confidence 4444332 3589999999999999999999999999999641 23 7899999999999
Q ss_pred cCcccEEecCcccHHHHHHHHHc-CCC--eeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCC
Q 020082 137 EGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLS 213 (331)
Q Consensus 137 ~Gkir~iGvS~~~~~~l~~~~~~-~~~--~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~ 213 (331)
+||||+||||||++++++++++. .++ |+++|++||++.+. .+++++|+++||++++|+||++|.|+ ++....
T Consensus 160 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~-- 234 (326)
T 3buv_A 160 AGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTSRNP-IWVNVS-- 234 (326)
T ss_dssp TTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCCCCT-TTSCTT--
T ss_pred cCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCCccc-cccccC--
Confidence 99999999999999999999975 456 89999999998764 57999999999999999999999986 443210
Q ss_pred CCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhh
Q 020082 214 IPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTN 293 (331)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~ 293 (331)
.+... ..+.+.++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+
T Consensus 235 ---------~~~~~-----------------~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~~I~g~~~--~~~l~en~ 284 (326)
T 3buv_A 235 ---------SPPLL-----------------KDALLNSLGKRYNKTAAQIVLRFNIQRG--VVVIPKSFN--LERIKENF 284 (326)
T ss_dssp ---------SCCGG-----------------GCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCCS--HHHHHHHH
T ss_pred ---------Ccccc-----------------ccHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEEeCCCC--HHHHHHHH
Confidence 01000 0178999999999999999999999998 479999999 99999999
Q ss_pred chhcCCCCHHHHHHHHHHhhcCC
Q 020082 294 AIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 294 ~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
++++.+||++++++|+++....+
T Consensus 285 ~~~~~~L~~e~~~~l~~~~~~~~ 307 (326)
T 3buv_A 285 QIFDFSLTEEEMKDIEALNKNVR 307 (326)
T ss_dssp CCSSCCCCHHHHHHHHTTCCSCC
T ss_pred hhcCCCCCHHHHHHHHHhccCCc
Confidence 99999999999999999986544
No 24
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=4.5e-54 Score=395.63 Aligned_cols=262 Identities=16% Similarity=0.243 Sum_probs=217.3
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||.+| ..+.+++.++|+.|++. |||+||||+ +.+|+.||++|++. +|+ .+++
T Consensus 16 ~v~~lglGt~~~~---~~~~~~~~~~v~~Al~~-----Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~---~~~I-- 82 (324)
T 3ln3_A 16 LIPALGFGTYXPX---EVPXSXSLEAACLALDV-----GYRHVDTAYAYQVEEEIGQAIQSXIXAGVVXRE---DLFV-- 82 (324)
T ss_dssp EEESSEEECCCCT---TSCHHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGG---GCEE--
T ss_pred CcCCeeecCCccc---CCChHHHHHHHHHHHHc-----CCCEEECcccccCHHHHHHHHHHhhccCCcccc---eeEE--
Confidence 4899999999875 35667888888888766 599999999 66899999999974 333 3444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC-------------------CCchHHHHHHHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-------------------SNPGYLDALNHLTDLKE 136 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~-------------------~~~~~~e~~~~l~~l~~ 136 (331)
.||+++. ..+++.+++++++||+||||||||+|++|||+. ..+ ++++|++|++|++
T Consensus 83 --~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~ 157 (324)
T 3ln3_A 83 --TTKLWCT--CFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVD-FCDTWERLEECXD 157 (324)
T ss_dssp --EEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCC-HHHHHHHHHHHHH
T ss_pred --EeeeCCc--cCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCC-HHHHHHHHHHHHh
Confidence 4444332 358999999999999999999999999999975 233 7899999999999
Q ss_pred cCcccEEecCcccHHHHHHHHHc-CCC--eeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCC
Q 020082 137 EGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLS 213 (331)
Q Consensus 137 ~Gkir~iGvS~~~~~~l~~~~~~-~~~--~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~ 213 (331)
+||||+||||||++++++++++. +++ |+++|++||++.+. .+++++|+++||++++|+||++|.+.. +...
T Consensus 158 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~g~~~~-~~~~--- 231 (324)
T 3ln3_A 158 AGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQ--RXLLDYCESXDIVLVAYGALGTQRYXE-WVDQ--- 231 (324)
T ss_dssp TTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTT-TSCT---
T ss_pred cCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccch--HHHHHHHHHcCCEEEEecCCCCCCccc-cccc---
Confidence 99999999999999999999874 344 88999999998663 689999999999999999999997531 1000
Q ss_pred CCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhh
Q 020082 214 IPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTN 293 (331)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~ 293 (331)
..+... ..+.++++|+++|+|++|+||+|+++++. ++|+|+++ ++||++|+
T Consensus 232 --------~~~~~~-----------------~~~~l~~ia~~~g~t~aqvaL~w~l~~~~--~~I~g~~~--~~~l~en~ 282 (324)
T 3ln3_A 232 --------NSPVLL-----------------NDPVLCDVAXXNXRSPALIALRYLIQRGI--VPLAQSFX--ENEMRENL 282 (324)
T ss_dssp --------TSCCGG-----------------GCHHHHHHHHHHTSCHHHHHHHHHHHTTC--EEEECCSS--HHHHHHHG
T ss_pred --------CCcchh-----------------cCHHHHHHHHhhCCCHHHHHHHHHHhCCC--EEEeCCCC--HHHHHHHH
Confidence 000000 01689999999999999999999999984 59999999 99999999
Q ss_pred chhcCCCCHHHHHHHHHHhhcCCC
Q 020082 294 AIFMLSLDEDDVNSIQEVTKKGKD 317 (331)
Q Consensus 294 ~a~~~~L~~~~~~~l~~~~~~~~~ 317 (331)
++++.+||++++++|+++....+-
T Consensus 283 ~~~~~~L~~e~~~~l~~l~~~~r~ 306 (324)
T 3ln3_A 283 QVFGFQLSPEDMXTLDGLNXNFRY 306 (324)
T ss_dssp GGGGCCCCHHHHHHHHTTCCCCCS
T ss_pred hhCCCCcCHHHHHHHHhcccCCcc
Confidence 999999999999999999876553
No 25
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=1.9e-54 Score=398.48 Aligned_cols=264 Identities=15% Similarity=0.209 Sum_probs=219.2
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||.||||||. .+.+++.++|+.|++. ||||||||+ +.||+.||++|++.............++.+|.
T Consensus 12 ~vp~iGlGtw~------~~~~~a~~~i~~Al~~-----Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~~~~ 80 (324)
T 4gac_A 12 KMPLIGLGTWK------SEPGQVKAAIKHALSA-----GYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKL 80 (324)
T ss_dssp EEESBCEECTT------CCHHHHHHHHHHHHHT-----TCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEEEEE
T ss_pred EeccceeECCC------CCHHHHHHHHHHHHHc-----CCCEEECCcccCCHHHHHHHHHhhhcccceeccccccccccc
Confidence 48999999985 3567888888888655 599999999 55999999999976443210112233444444
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC-------------------CCchHHHHHHHHHHHHHcCcccE
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-------------------SNPGYLDALNHLTDLKEEGKIKT 142 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~-------------------~~~~~~e~~~~l~~l~~~Gkir~ 142 (331)
++. +.+++.+++++++||+||||||||||++|||+. ..+ ++|+|++|++|+++||||+
T Consensus 81 ~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~ 157 (324)
T 4gac_A 81 WNT--KHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTH-YKETWKALEVLVAKGLVKA 157 (324)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCC-HHHHHHHHHHHHHTTSBSC
T ss_pred CCC--CCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCC-HHHHHHHHHHHHHCCCeeE
Confidence 332 468999999999999999999999999999863 234 7899999999999999999
Q ss_pred EecCcccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCC
Q 020082 143 VALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPL 221 (331)
Q Consensus 143 iGvS~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~ 221 (331)
||||||++++++++... .+++.++|+.||+... +.+++++|+++||++++|+||++|.+++++....
T Consensus 158 iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~---------- 225 (324)
T 4gac_A 158 LGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEP---------- 225 (324)
T ss_dssp EEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSC----------
T ss_pred ecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHHHHHHHHHhceeeeecCCcccCccccCCCCCc----------
Confidence 99999999999999874 5789999999998755 4589999999999999999999999988764321
Q ss_pred CCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCC
Q 020082 222 NTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLD 301 (331)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~ 301 (331)
... ..+.+.++|+++|+|++|+||+|+++++.| +|+|+++ ++||+||+++++++||
T Consensus 226 ---~~~-----------------~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G~~~--~~~l~eN~~a~~~~Ls 281 (324)
T 4gac_A 226 ---VLL-----------------EEPVVLALAEKHGRSPAQILLRWQVQRKVI--CIPKSIN--PSRILQNIQVFDFTFS 281 (324)
T ss_dssp ---CGG-----------------GCHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCBCCC--HHHHHHHTCCSSCCCC
T ss_pred ---chh-----------------hHHHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEECCCC--HHHHHHHHhhCCCCCC
Confidence 000 016789999999999999999999999854 8999999 9999999999999999
Q ss_pred HHHHHHHHHHhhcCC
Q 020082 302 EDDVNSIQEVTKKGK 316 (331)
Q Consensus 302 ~~~~~~l~~~~~~~~ 316 (331)
++++++|+++.+..+
T Consensus 282 ~ee~~~id~l~~~~R 296 (324)
T 4gac_A 282 PEEMKQLDALNKNWR 296 (324)
T ss_dssp HHHHHHHHTTCCCCC
T ss_pred HHHHHHHhccCcCCC
Confidence 999999999987655
No 26
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=2.5e-54 Score=395.86 Aligned_cols=262 Identities=20% Similarity=0.341 Sum_probs=214.4
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||.||||||++ +.+++.++|+.|++. ||||||||+ +.+|+.||++|++. +|+ .+
T Consensus 12 ~v~~lglGt~~~------~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~---~v---- 73 (316)
T 3o3r_A 12 KMPLVGLGTWKS------PPGQVKEAVKAAIDA-----GYRHFDCAYVYQNESEVGEAIQEKIKEKAVRRE---DL---- 73 (316)
T ss_dssp EEESBEEBCTTC------CTTHHHHHHHHHHHT-----TCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGG---GC----
T ss_pred EeCCeeeECCcC------CcHHHHHHHHHHHHc-----CCCEEEccCccCCHHHHHHHHHHHHhhCCCChH---Hc----
Confidence 489999999953 346778888888655 599999999 66899999999973 333 34
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCC-------------------CCCchHHHHHHHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWD-------------------YSNPGYLDALNHLTDLKE 136 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d-------------------~~~~~~~e~~~~l~~l~~ 136 (331)
++.||+++. ..+++.+++++++||+||||||||+|++|||+ ...+ ++++|++|++|++
T Consensus 74 ~I~TK~~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~ 150 (316)
T 3o3r_A 74 FIVSKLWST--FFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKST-FLDAWEGMEELVD 150 (316)
T ss_dssp EEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCC-HHHHHHHHHHHHH
T ss_pred EEEeeeCCC--cCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCccccccccccccccccccc-HHHHHHHHHHHHH
Confidence 444444432 24799999999999999999999999999996 2344 7899999999999
Q ss_pred cCcccEEecCcccHHHHHHHHHc-CC--CeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCC
Q 020082 137 EGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLS 213 (331)
Q Consensus 137 ~Gkir~iGvS~~~~~~l~~~~~~-~~--~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~ 213 (331)
+||||+||||||++++++++++. ++ +++++|++||++.+. .+++++|+++||++++|+||++|... +..
T Consensus 151 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~--~~~---- 222 (316)
T 3o3r_A 151 QGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ--EKLIQYCHSKGIAVIAYSPLGSPDRP--YAK---- 222 (316)
T ss_dssp TTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHTTTCEEEEECTTCCTTCT--TCC----
T ss_pred cCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccch--HHHHHHHHHcCCEEEEecccCCCCCc--ccc----
Confidence 99999999999999999999874 33 589999999998763 68999999999999999999998321 100
Q ss_pred CCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhh
Q 020082 214 IPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTN 293 (331)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~ 293 (331)
+. .+... ..+.+.++|+++|+|++|+||+|+++++. ++|+|+++ ++||++|+
T Consensus 223 -~~------~~~~~-----------------~~~~l~~ia~~~g~t~aqvaL~w~l~~~~--~vi~g~~~--~~~l~en~ 274 (316)
T 3o3r_A 223 -PE------DPVVL-----------------EIPKIKEIAAKHKKTIAQVLIRFHVQRNV--AVIPKSVT--LSHIKENI 274 (316)
T ss_dssp -TT------SCCST-----------------TCHHHHHHHHHHTCCHHHHHHHHHHTTTC--EECCBCCS--HHHHHHHT
T ss_pred -cc------chhhh-----------------cCHHHHHHHHHhCCCHHHHHHHHHHhCCC--EEeCCCCC--HHHHHHHH
Confidence 00 00000 01689999999999999999999999984 58999999 99999999
Q ss_pred chhcCCCCHHHHHHHHHHhhcCCCCCCc
Q 020082 294 AIFMLSLDEDDVNSIQEVTKKGKDLLGV 321 (331)
Q Consensus 294 ~a~~~~L~~~~~~~l~~~~~~~~~~~~~ 321 (331)
++++.+||++++++|+++....+.....
T Consensus 275 ~a~~~~L~~ee~~~l~~l~~~~r~~~~~ 302 (316)
T 3o3r_A 275 QVFDFQLSEEDMAAILSLNRNWRACGLF 302 (316)
T ss_dssp CCSSCCCCHHHHHHHHTTCCCCCCCSCG
T ss_pred hhCCCCcCHHHHHHHHccccCCcccccc
Confidence 9999999999999999998877665543
No 27
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-54 Score=397.43 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=211.7
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||.||||||+++ +.+++.++|+.|++. ||||||||+ +.+|+.+|+++++...+.. ......++.+|.
T Consensus 50 ~ip~lGlGt~~~~-----d~~e~~~~v~~Al~~-----Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~-i~r~~~~i~~k~ 118 (314)
T 3b3d_A 50 EMPWFGLGVFQVE-----EGSELVNAVKTAIVH-----GYRSIDTAAIYGNEAGVGEGIREGIEEAG-ISREDLFITSKV 118 (314)
T ss_dssp EEESBCEECCSCC-----CSHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHHHT-CCGGGCEEEEEE
T ss_pred cccceeEECCCCC-----CHHHHHHHHHHHHHc-----CCCEEECccccCChHHHHHHHHHHHHHhC-CCcccccccccC
Confidence 3889999999763 457888888888766 599999999 6689999999986432211 112233444554
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-C
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-G 160 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~ 160 (331)
++. +.+++.+++++++||+||||||||||++|||+... ..++|++|++|+++||||+||||||++++++++.+. .
T Consensus 119 ~~~--~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~~--~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~ 194 (314)
T 3b3d_A 119 WNA--DLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGK--YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAE 194 (314)
T ss_dssp CGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTT--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCS
T ss_pred cCC--CCCHHHHHHHHHHHHHHhCCCcccccccccccccc--hhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcC
Confidence 433 46899999999999999999999999999998653 579999999999999999999999999999999874 3
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccCCch
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWS 240 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
+++.++|++++ .+..+.+++++|+++||++++|+||++|.|+++
T Consensus 195 i~~~~nq~~~~--~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~---------------------------------- 238 (314)
T 3b3d_A 195 IKPMINQVEFH--PRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDH---------------------------------- 238 (314)
T ss_dssp SCCSEEEEECB--TTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTC----------------------------------
T ss_pred CCeEEEEeccc--cccchHHHHHHHHHcCCEEEEeccccCCcccCc----------------------------------
Confidence 55666665554 456667899999999999999999999998753
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCCC
Q 020082 241 QFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 317 (331)
Q Consensus 241 ~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~~ 317 (331)
..+.++|+++|+|++|+||+|++++|.| +|+|+++ ++||+||+++++++||++++++|+++.+..+-
T Consensus 239 ------~~~~~ia~~~g~t~aqvaL~w~l~~~~v--~I~G~~~--~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~ 305 (314)
T 3b3d_A 239 ------PVLADIAQTYNKSVAQIILRWDLQHGII--TIPKSTK--EHRIKENASVFDFELTQDDMNRIDALNENLRV 305 (314)
T ss_dssp ------HHHHHHHHHTTCCHHHHHHHHHHHTTCE--ECCBCCC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred ------hhhHHHHHHcCCCHHHHHHHHHHhCCCE--EEECCCC--HHHHHHHHHhcCCCCCHHHHHHHhccCCCCCC
Confidence 4677899999999999999999999865 8999999 99999999999999999999999998876553
No 28
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=2.9e-54 Score=396.47 Aligned_cols=261 Identities=19% Similarity=0.246 Sum_probs=217.2
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||++|. .+.+++.++|+.|++. |||+||||+ +.+|+.+|++|++. +|+ .+++++
T Consensus 15 ~v~~lglGt~~~g~---~~~~~~~~~l~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~---~~~I~T 83 (323)
T 1afs_A 15 FIPVLGFGTTVPEK---VAKDEVIKATKIAIDN-----GFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKRE---DIFYTS 83 (323)
T ss_dssp EEESSEEECCCCTT---SCTTHHHHHHHHHHHT-----TCCEEECCTTTTCHHHHHHHHHHHHHTTSCCGG---GCEEEE
T ss_pred eECCeeEecccCCC---CCHHHHHHHHHHHHHc-----CCCEEECcccccCHHHHHHHHHHHHhcCCCChH---HeEEEE
Confidence 48999999998763 4567788888888665 599999999 66899999999873 333 344444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC-------------------CCchHHHHHHHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-------------------SNPGYLDALNHLTDLKE 136 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~-------------------~~~~~~e~~~~l~~l~~ 136 (331)
| .++. ..+++.+++++++||+|||+||||+|+||||+. ..+ ++++|++|++|++
T Consensus 84 K----~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~-~~e~~~ale~l~~ 156 (323)
T 1afs_A 84 K----LWST--FHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVD-ICDTWEAMEKCKD 156 (323)
T ss_dssp E----ECGG--GCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCC-HHHHHHHHHHHHH
T ss_pred e----cCCC--cCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCC-HHHHHHHHHHHHH
Confidence 4 3332 347889999999999999999999999999942 123 7899999999999
Q ss_pred cCcccEEecCcccHHHHHHHHHc-CC--CeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCC
Q 020082 137 EGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLS 213 (331)
Q Consensus 137 ~Gkir~iGvS~~~~~~l~~~~~~-~~--~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~ 213 (331)
+||||+||||||++++++++++. .+ +|+++|++||++.+. .+++++|+++||++++|+||++|.|++ +....
T Consensus 157 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~-- 231 (323)
T 1afs_A 157 AGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSSRDKT-WVDQK-- 231 (323)
T ss_dssp TTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCCCCTT-TSCTT--
T ss_pred cCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCCcccc-ccccC--
Confidence 99999999999999999999975 46 789999999998765 579999999999999999999999875 32110
Q ss_pred CCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhh
Q 020082 214 IPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTN 293 (331)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~ 293 (331)
.+... ..+.++++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+
T Consensus 232 ---------~~~~~-----------------~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~ 281 (323)
T 1afs_A 232 ---------SPVLL-----------------DDPVLCAIAKKYKQTPALVALRYQLQRG--VVPLIRSFN--AKRIKELT 281 (323)
T ss_dssp ---------SCCGG-----------------GCHHHHHHHHHTTCCHHHHHHHHHHHTT--CEEEECCSC--HHHHHHHT
T ss_pred ---------Ccchh-----------------cCHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEeeCCCC--HHHHHHHH
Confidence 01000 0178999999999999999999999998 489999999 99999999
Q ss_pred chhcCCCCHHHHHHHHHHhhcCC
Q 020082 294 AIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 294 ~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
++++.+||++++++|+++....+
T Consensus 282 ~~~~~~L~~e~~~~l~~~~~~~~ 304 (323)
T 1afs_A 282 QVFEFQLASEDMKALDGLNRNFR 304 (323)
T ss_dssp TTTSCCCCHHHHHHHHTTCCCCC
T ss_pred hhccCCCCHHHHHHHHhhcccCC
Confidence 99999999999999999986544
No 29
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=7.2e-54 Score=395.00 Aligned_cols=261 Identities=18% Similarity=0.258 Sum_probs=217.4
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||++|. .+.+++.++|+.|++. |||+||||+ +.+|+.||++|++. +|+ .+++.+
T Consensus 15 ~v~~lglGt~~~~~---~~~~~~~~~l~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~~R~---~~~I~T 83 (331)
T 1s1p_A 15 FMPVLGFGTYAPPE---VPRSKALEVTKLAIEA-----GFRHIDSAHLYNNEEQVGLAIRSKIADGSVKRE---DIFYTS 83 (331)
T ss_dssp EEESEEEECCCCTT---SCTTHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGG---GCEEEE
T ss_pred EeCCeeEcCccCCC---CCHHHHHHHHHHHHHc-----CCCEEEccccccCHHHHHHHHHHHHhcCCCCch---heEEEe
Confidence 48999999998753 4567788888888766 599999999 55799999999873 333 344444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC-------------------CCchHHHHHHHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-------------------SNPGYLDALNHLTDLKE 136 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~-------------------~~~~~~e~~~~l~~l~~ 136 (331)
|.++. ..+++.+++++++||+|||+||||+|++|||+. ..+ ++++|++|++|++
T Consensus 84 ----K~~~~--~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~-~~e~~~ale~l~~ 156 (331)
T 1s1p_A 84 ----KLWST--FHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVD-LCTTWEAMEKCKD 156 (331)
T ss_dssp ----EECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCC-HHHHHHHHHHHHH
T ss_pred ----ccCCc--cCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccC-HHHHHHHHHHHHH
Confidence 44332 358999999999999999999999999999953 123 7899999999999
Q ss_pred cCcccEEecCcccHHHHHHHHHc-CC--CeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCC
Q 020082 137 EGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLS 213 (331)
Q Consensus 137 ~Gkir~iGvS~~~~~~l~~~~~~-~~--~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~ 213 (331)
+||||+||||||++++++++++. .+ +|+++|++||++.+. .+++++|+++||++++|+||++|.|++ +....
T Consensus 157 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~-- 231 (331)
T 1s1p_A 157 AGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKR-WVDPN-- 231 (331)
T ss_dssp TTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTT-TSCTT--
T ss_pred cCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCCcccc-cccCC--
Confidence 99999999999999999999975 45 789999999998765 579999999999999999999999875 32100
Q ss_pred CCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhh
Q 020082 214 IPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTN 293 (331)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~ 293 (331)
.+.... .+.++++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+
T Consensus 232 ---------~~~~~~-----------------~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~ 281 (331)
T 1s1p_A 232 ---------SPVLLE-----------------DPVLCALAKKHKRTPALIALRYQLQRG--VVVLAKSYN--EQRIRQNV 281 (331)
T ss_dssp ---------SCCGGG-----------------CHHHHHHHHHHTSCHHHHHHHHHHHTT--CEEEEECCS--HHHHHHHG
T ss_pred ---------Cccccc-----------------CHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEeeCCCC--HHHHHHHh
Confidence 010000 168999999999999999999999998 379999999 99999999
Q ss_pred chhcCCCCHHHHHHHHHHhhcCC
Q 020082 294 AIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 294 ~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
++++.+||+++++.|+++....+
T Consensus 282 ~~~~~~L~~e~~~~l~~~~~~~~ 304 (331)
T 1s1p_A 282 QVFEFQLTAEDMKAIDGLDRNLH 304 (331)
T ss_dssp GGGGCCCCHHHHHHHHTTCCCCC
T ss_pred hhcCCCcCHHHHHHHHHHhcCCc
Confidence 99999999999999999976544
No 30
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=6.7e-54 Score=393.11 Aligned_cols=266 Identities=17% Similarity=0.230 Sum_probs=217.4
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||++ +.+++.++|+.|++. |||+||||+ +.+|+.||++|++. +|+ .++
T Consensus 15 ~vs~lglGt~~~------~~~~~~~~v~~Al~~-----Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~---~~~--- 77 (317)
T 1qwk_A 15 EMPVIGLGTWQS------SPAEVITAVKTAVKA-----GYRLIDTASVYQNEEAIGTAIKELLEEGVVKRE---ELF--- 77 (317)
T ss_dssp EEESBCEECTTC------CHHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHHTSCCGG---GCE---
T ss_pred EeCCeeEECCcC------CHHHHHHHHHHHHHc-----CCCEEEccccccCHHHHHHHHHHHhhcCCCChh---heE---
Confidence 489999999963 467888888888666 599999999 55899999999873 333 344
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC---------CCchHHHHHHHHHHHHHcCcccEEecC
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY---------SNPGYLDALNHLTDLKEEGKIKTVALT 146 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~---------~~~~~~e~~~~l~~l~~~Gkir~iGvS 146 (331)
+.||.++. ..+++.+++++++||+|||+||||+|++|||+. ..+ .+++|++|++|+++||||+||||
T Consensus 78 -i~TK~~~~--~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvS 153 (317)
T 1qwk_A 78 -ITTKAWTH--ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASP-VEDVWRQFDAVYKAGLAKAVGVS 153 (317)
T ss_dssp -EEEEECTT--TSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCC-HHHHHHHHHHHHHTTSBSSEEEE
T ss_pred -EEeeeCCC--cCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCC-HHHHHHHHHHHHHcCCeeEEEec
Confidence 44444432 357899999999999999999999999999975 234 78999999999999999999999
Q ss_pred cccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCch
Q 020082 147 NFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPS 225 (331)
Q Consensus 147 ~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~ 225 (331)
||++++++++++. +++++++|++||++.+. .+++++|+++||++++|+||++|.|+ ++.... ..+ .+.+ ..+.
T Consensus 154 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~-~~~-~~~~-~~~~ 227 (317)
T 1qwk_A 154 NWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV-NFTLPT-GQK-LDWA-PAPS 227 (317)
T ss_dssp SCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE-CCBCTT-CCB-CCCE-ECSS
T ss_pred CCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc-cccccc-ccc-cccc-ccch
Confidence 9999999999975 46799999999998765 57999999999999999999999886 443211 000 0000 0000
Q ss_pred hHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHH
Q 020082 226 LQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDV 305 (331)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~ 305 (331)
. . ..+.+.++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+++++.+||++++
T Consensus 228 ~---------------~--~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~~a~~~~L~~e~~ 286 (317)
T 1qwk_A 228 D---------------L--QDQNVLALAEKTHKTPAQVLLRYALDRG--CAILPKSIQ--ENRIKENFEVFDFSLTEEDI 286 (317)
T ss_dssp G---------------G--GCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEEECCCCS--HHHHHHHHCCSSCCCCHHHH
T ss_pred h---------------h--ccHHHHHHHHHHCcCHHHHHHHHHHhCC--CeEEeCCCC--HHHHHHHHhhcCCCCCHHHH
Confidence 0 0 0278999999999999999999999998 389999999 99999999999999999999
Q ss_pred HHHHHHhhcCC
Q 020082 306 NSIQEVTKKGK 316 (331)
Q Consensus 306 ~~l~~~~~~~~ 316 (331)
++|+++....+
T Consensus 287 ~~l~~~~~~~~ 297 (317)
T 1qwk_A 287 AKLEESKNSQR 297 (317)
T ss_dssp HHHTTTCCCCC
T ss_pred HHHHHHhhcCc
Confidence 99999986644
No 31
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=6.6e-54 Score=388.53 Aligned_cols=246 Identities=17% Similarity=0.227 Sum_probs=210.9
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||+++ .+++.++|+.|++. |||+||||+ +.+|+.+|++|++. +|+ .+++
T Consensus 25 ~v~~lglGt~~~~------~~~~~~~v~~Al~~-----Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~---~v~I-- 88 (298)
T 1vp5_A 25 EMPILGYGVFQIP------PEKTEECVYEAIKV-----GYRLIDTAASYMNEEGVGRAIKRAIDEGIVRRE---ELFV-- 88 (298)
T ss_dssp EEESBCEECTTCC------HHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGG---GCEE--
T ss_pred CccCeeEeCCcCC------hHHHHHHHHHHHHc-----CCCEEECCCcccCHHHHHHHHHHhhhccCCChh---hEEE--
Confidence 4899999999753 36778888888665 599999999 55899999999964 233 3444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRI 155 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~ 155 (331)
.||+++. +.+++.+++++++||+|||+||||+|++|||++ + .+++|++|++|+++||||+||||||+++++++
T Consensus 89 --~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~ 161 (298)
T 1vp5_A 89 --TTKLWVS--DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--D-VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMD 161 (298)
T ss_dssp --EEEECGG--GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--C-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHH
T ss_pred --EeccCCC--CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--C-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHH
Confidence 4444332 357899999999999999999999999999986 4 78999999999999999999999999999999
Q ss_pred HHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhh
Q 020082 156 ILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVD 234 (331)
Q Consensus 156 ~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
+++. +++|+++|++||++++. .+++++|+++||++++|+||++|. +++..
T Consensus 162 ~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~--~~~l~------------------------- 212 (298)
T 1vp5_A 162 LMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGR--KNIFQ------------------------- 212 (298)
T ss_dssp HHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGG--GGGGG-------------------------
T ss_pred HHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccCC--ccccC-------------------------
Confidence 9985 47789999999999876 479999999999999999999984 11000
Q ss_pred ccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhc
Q 020082 235 AWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 314 (331)
Q Consensus 235 ~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~ 314 (331)
.+.++++|+++|+|++|+||+|+++++ + ++|+|+++ ++||++|+++++.+||++++++|+++...
T Consensus 213 -----------~~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~g~~~--~~~l~enl~a~~~~Ls~e~~~~l~~~~~~ 277 (298)
T 1vp5_A 213 -----------NGVLRSIAEKYGKTVAQVILRWLTQKG-I-VAIPKTVR--RERMKENISIFDFELTQEDMEKIATLDEG 277 (298)
T ss_dssp -----------CHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCCCSC--HHHHHHHHCCSSCCCCHHHHHHHHTTCCS
T ss_pred -----------cHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 067899999999999999999999996 4 79999999 99999999999999999999999999865
Q ss_pred C
Q 020082 315 G 315 (331)
Q Consensus 315 ~ 315 (331)
.
T Consensus 278 ~ 278 (298)
T 1vp5_A 278 Q 278 (298)
T ss_dssp S
T ss_pred c
Confidence 4
No 32
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=6e-54 Score=388.45 Aligned_cols=246 Identities=16% Similarity=0.295 Sum_probs=209.7
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh--hcCCCccchheeeecc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV--RRERPPEFLDKVRGLT 79 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~--~~~~~~~~~~~~~~~~ 79 (331)
.||+||||||+++ .+++.++|+.|++. |||+||||+ +.+|+.||++|++. +|+ .+++.+|
T Consensus 35 ~vs~lglGt~~~~------~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~E~~vG~al~~~~~~R~---~v~I~TK--- 97 (296)
T 1mzr_A 35 VMPQLGLGVWQAS------NEEVITAIQKALEV-----GYRSIDTAAAYKNEEGVGKALKNASVNRE---ELFITTK--- 97 (296)
T ss_dssp EEESBCEECCSCC------HHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHSCSCGG---GCEEEEE---
T ss_pred eeCCEeEECCCCC------HHHHHHHHHHHHHc-----CCCEEECCccccCHHHHHHHHHhcCCCcc---cEEEEec---
Confidence 4899999999763 47788888888666 599999999 55799999999963 333 3444444
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC-CchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHH
Q 020082 80 KWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE 158 (331)
Q Consensus 80 k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~-~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~ 158 (331)
.++.. . +.+++++++||+|||+||||+|++|||++. .+ .+++|++|++|+++||||+||||||++++++++++
T Consensus 98 -~~~~~--~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~ 171 (296)
T 1mzr_A 98 -LWNDD--H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDH-YVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLID 171 (296)
T ss_dssp -ECGGG--T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHH
T ss_pred -cCCCc--H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCC-HHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHH
Confidence 33321 2 789999999999999999999999999873 55 78999999999999999999999999999999987
Q ss_pred c-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchhHHHHhhhhccC
Q 020082 159 N-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWG 237 (331)
Q Consensus 159 ~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
. +++++++|++||++++. .+++++|+++||++++|+||++|.+. + +.
T Consensus 172 ~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~--~-------------l~--------------- 219 (296)
T 1mzr_A 172 ETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKG--V-------------FD--------------- 219 (296)
T ss_dssp HHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTT--T-------------TT---------------
T ss_pred hcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCcch--h-------------cC---------------
Confidence 4 57889999999998875 47999999999999999999999531 0 00
Q ss_pred CchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcC
Q 020082 238 GWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 315 (331)
Q Consensus 238 ~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~ 315 (331)
.+.+.++|+++|+|++|+||+|+++++ + ++|+|+++ ++||++|+++++.+||++++++|+++....
T Consensus 220 --------~~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~g~~~--~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 285 (296)
T 1mzr_A 220 --------QKVIRDLADKYGKTPAQIVIRWHLDSG-L-VVIPKSVT--PSRIAENFDVWDFRLDKDELGEIAKLDQGK 285 (296)
T ss_dssp --------SHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCBCCC--HHHHHHTTCCSSCCCCHHHHHHHHTTCCCC
T ss_pred --------hHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeCCCC--HHHHHHHHhhcCCCCCHHHHHHHHHhhhcC
Confidence 067899999999999999999999995 4 79999999 999999999999999999999999998654
No 33
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=3.7e-54 Score=389.79 Aligned_cols=236 Identities=17% Similarity=0.185 Sum_probs=197.4
Q ss_pred cccceeeeccccC---------CCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC--CchHHHHHHHHhhhhcCCCccc
Q 020082 3 SVERDVADEWRVG---------PYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD--GPAEDLYGIFINRVRRERPPEF 71 (331)
Q Consensus 3 ~vS~l~lGt~~~g---------~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~--g~sE~~lG~~l~~~~~~~~~~~ 71 (331)
.||+||||||++| .|+..+.+++.++|+.|++. ||||||||+ |.||+.||++|+. +|+ .+
T Consensus 41 ~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~-----Gi~~~DTA~~Yg~sE~~lG~al~~-~R~---~v 111 (292)
T 4exb_A 41 AVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDL-----GINLIDTAPAYGRSEERLGPLLRG-QRE---HW 111 (292)
T ss_dssp EECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHT-----TCCEEECCTTSTTHHHHHHHHHTT-TGG---GC
T ss_pred ccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHc-----CCCEEEcCCccchHHHHHHHHhcc-CCC---cE
Confidence 4899999999997 35556778888999998665 599999999 6699999999987 444 55
Q ss_pred hheeeecccccC--CCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecC--CCCCchHH-HHHHHHHHHHHcCcccEEecC
Q 020082 72 LDKVRGLTKWVP--PPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW--DYSNPGYL-DALNHLTDLKEEGKIKTVALT 146 (331)
Q Consensus 72 ~~~~~~~~k~~~--~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~--d~~~~~~~-e~~~~l~~l~~~Gkir~iGvS 146 (331)
++.+|+...+.+ ...+.+++.+++++++||+|||+||||+|++||| ++..+ .+ ++|++|++|+++||||+||||
T Consensus 112 ~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~-~~~e~~~al~~l~~~Gkir~iGvS 190 (292)
T 4exb_A 112 VIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDIL-ENSEVYPTLAALKREGLIGAYGLS 190 (292)
T ss_dssp EEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHH-HHSSHHHHHHHHHHTTSEEEEEEE
T ss_pred EEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCcccc-chHHHHHHHHHHHHCCCceEEEeC
Confidence 666665533222 2335799999999999999999999999999999 54444 44 899999999999999999999
Q ss_pred cccHHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchh
Q 020082 147 NFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSL 226 (331)
Q Consensus 147 ~~~~~~l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~ 226 (331)
||++++++++++. |+++|++||++++.. .+++++|+++||++++|+||++|+|++
T Consensus 191 n~~~~~l~~~~~~---~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~--------------------- 245 (292)
T 4exb_A 191 GKTVEGGLRALRE---GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACL--------------------- 245 (292)
T ss_dssp CSSHHHHHHHHHH---SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC--------------------------
T ss_pred CCCHHHHHHHHHh---hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCC---------------------
Confidence 9999999999885 899999999999887 789999999999999999999997742
Q ss_pred HHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHH
Q 020082 227 QKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDED 303 (331)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~ 303 (331)
++|+|++|+||+|++++|.|+++|+|+++ ++||+||+++++..||++
T Consensus 246 ----------------------------~~g~t~aqvaL~w~l~~~~v~~vI~g~~~--~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 246 ----------------------------GAGQDPVRASFELVFDQPGVAAAIVGTIN--PLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp -------------------------------CCHHHHHHHHHHHSTTCCEEEECCCC--HHHHHHHHHHHHHHHC--
T ss_pred ----------------------------CCCCCHHHHHHHHHHhCCCCeEEEeCCCC--HHHHHHHHHHhhccCCCC
Confidence 27899999999999999999999999999 999999999999888875
No 34
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=4.8e-53 Score=387.40 Aligned_cols=257 Identities=18% Similarity=0.293 Sum_probs=213.6
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||+ .+.+++.++|+.|++. |||+||||+ +.+|+.+|++|++. +|+ .+++++
T Consensus 12 ~v~~lglGt~~------~~~~~~~~~l~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~---~~~I~T 77 (316)
T 1us0_A 12 KMPILGLGTWK------SPPGQVTEAVKVAIDV-----GYRHIDCAHVYQNENEVGVAIQEKLREQVVKRE---ELFIVS 77 (316)
T ss_dssp EEESBCEECTT------CCHHHHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHTTSSCGG---GCEEEE
T ss_pred EECCEeEECCc------CCHHHHHHHHHHHHHc-----CCCEEEcccccCCHHHHHHHHHHHHhcCCCChh---HeEEEE
Confidence 48999999985 3567788888888666 599999999 55899999999873 333 344444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC-------------------CchHHHHHHHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-------------------NPGYLDALNHLTDLKE 136 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~-------------------~~~~~e~~~~l~~l~~ 136 (331)
| .++. ..+++.+++++++||+|||+||||+|++|||+.. .+ ++++|++|++|++
T Consensus 78 K----~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~ale~l~~ 150 (316)
T 1us0_A 78 K----LWCT--YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTN-ILDTWAAMEELVD 150 (316)
T ss_dssp E----ECGG--GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCC-HHHHHHHHHHHHH
T ss_pred e----eCCC--cCCHHHHHHHHHHHHHHhCCCceeeEEEecCcccccccccccccccccccccccc-HHHHHHHHHHHHH
Confidence 4 3332 3589999999999999999999999999999641 23 7899999999999
Q ss_pred cCcccEEecCcccHHHHHHHHHc-CC--CeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCC
Q 020082 137 EGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLS 213 (331)
Q Consensus 137 ~Gkir~iGvS~~~~~~l~~~~~~-~~--~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~ 213 (331)
+||||+||||||++++++++++. .+ +|+++|++||++.+. .+++++|+++||++++|+||++|.|. +....
T Consensus 151 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~--~~~~~-- 224 (316)
T 1us0_A 151 EGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDRP--WAKPE-- 224 (316)
T ss_dssp TTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTCT--TCCTT--
T ss_pred CCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCccc--cccCC--
Confidence 99999999999999999999975 35 789999999998764 57999999999999999999999762 22100
Q ss_pred CCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhh
Q 020082 214 IPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTN 293 (331)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~ 293 (331)
. +... ..+.+.++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+
T Consensus 225 ----~-----~~~~-----------------~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~~I~g~~~--~~~l~en~ 274 (316)
T 1us0_A 225 ----D-----PSLL-----------------EDPRIKAIAAKHNKTTAQVLIRFPMQRN--LVVIPKSVT--PERIAENF 274 (316)
T ss_dssp ----S-----CCTT-----------------TCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCCC--HHHHHHHH
T ss_pred ----C-----cccc-----------------cCHHHHHHHHHhCCCHHHHHHHHHHHCC--CEEEeCCCC--HHHHHHHh
Confidence 0 0000 0168899999999999999999999997 489999999 99999999
Q ss_pred chhcCCCCHHHHHHHHHHhhcCC
Q 020082 294 AIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 294 ~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
++++.+||++++++|+++....+
T Consensus 275 ~~~~~~L~~e~~~~l~~~~~~~~ 297 (316)
T 1us0_A 275 KVFDFELSSQDMTTLLSYNRNWR 297 (316)
T ss_dssp CCSSCCCCHHHHHHHHTTCCCCC
T ss_pred hhcCCCCCHHHHHHHHhhccCCc
Confidence 99999999999999999976543
No 35
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=4.5e-53 Score=389.99 Aligned_cols=259 Identities=19% Similarity=0.248 Sum_probs=212.3
Q ss_pred CcccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh--------hcCCCccch
Q 020082 2 QSVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV--------RRERPPEFL 72 (331)
Q Consensus 2 ~~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~--------~~~~~~~~~ 72 (331)
..||.||||||.+ +.+++.++|+.|++. |||+||||+ +.+|+.||++|++. +|+ .++
T Consensus 23 ~~vp~lGlGt~~~------~~~~~~~~v~~Al~~-----Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~~R~---~v~ 88 (334)
T 3krb_A 23 QYPPRLGFGTWQA------PPEAVQTAVETALMT-----GYRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKRE---DVW 88 (334)
T ss_dssp SSCCSBCEECTTC------CHHHHHHHHHHHHHH-----TCCEEECCGGGSCHHHHHHHHHHHHHCTTSSCCGG---GCE
T ss_pred CccCCeeeeCCCC------CHHHHHHHHHHHHHc-----CCCEEECcccccCHHHHHHHHHHHhhhccCCCChh---hEE
Confidence 5699999999963 557888888888666 599999999 55999999999832 333 344
Q ss_pred heeeecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC---------------------CchHHHHHHHH
Q 020082 73 DKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS---------------------NPGYLDALNHL 131 (331)
Q Consensus 73 ~~~~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~---------------------~~~~~e~~~~l 131 (331)
+.||+++. +.+++.+++++++||+|||+||||+|++|||+.. .+ ++++|++|
T Consensus 89 ----I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~-~~e~~~al 161 (334)
T 3krb_A 89 ----ITSKLWNY--NHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVP-LADTWRAM 161 (334)
T ss_dssp ----EEEEECGG--GCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCC-HHHHHHHH
T ss_pred ----EEeeeCCC--CCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCC-HHHHHHHH
Confidence 44444332 3578999999999999999999999999999431 34 78999999
Q ss_pred HHHHHcCcccEEecCcccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCC
Q 020082 132 TDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDT 210 (331)
Q Consensus 132 ~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~ 210 (331)
++|+++||||+||||||++++++++++. .++++++|++||++++. .+++++|+++||++++|+||++|+|++++...
T Consensus 162 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~ 239 (334)
T 3krb_A 162 EQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYSPMGGSYADPRDPSG 239 (334)
T ss_dssp HHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCSBC-------
T ss_pred HHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEecCCCCcccCCCCCC
Confidence 9999999999999999999999999875 46899999999998764 68999999999999999999999999875321
Q ss_pred CCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHH-----HHHHhCCCceeEeecccCCc
Q 020082 211 NLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAV-----RYILDQPAVAGSMIGVRLGL 285 (331)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al-----~~~l~~~~v~~~i~G~~~~~ 285 (331)
. . .+... ..+.+.++|+++|+|++|+|| +|+++ .+++|||+++
T Consensus 240 ~--------~--~~~~~-----------------~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~---~~~vI~gs~~-- 287 (334)
T 3krb_A 240 T--------Q--KNVIL-----------------ECKTLKAIADAKGTSPHCVALAWHVKKWNTS---MYSVIPKSQT-- 287 (334)
T ss_dssp C--------C--BCGGG-----------------GCHHHHHHHHHHTSCHHHHHHHHHHHHSCST---TEEECCBCSS--
T ss_pred C--------c--ccchh-----------------ccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC---CeEEeeCCCC--
Confidence 1 0 00000 027899999999999999999 66666 3789999999
Q ss_pred HhHHHHhhchhcCCCCHHHHHHHHHHhhcC
Q 020082 286 AEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 315 (331)
Q Consensus 286 ~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~ 315 (331)
++||++|+++++.+||++++++|+++.+..
T Consensus 288 ~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 317 (334)
T 3krb_A 288 PARIEANFKCTEVQLSDDDMDAINNIHLNK 317 (334)
T ss_dssp HHHHHHHGGGGGCCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHhhcCC
Confidence 999999999999999999999999998765
No 36
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=8e-53 Score=388.30 Aligned_cols=259 Identities=17% Similarity=0.209 Sum_probs=211.7
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhhhcCCCccchheeeecccc
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRVRRERPPEFLDKVRGLTKW 81 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~ 81 (331)
.||+||||||.+ +.+++.++|+.|++. |||+||||+ +.+|+.+|++|++...... ..+.++++.||.
T Consensus 35 ~v~~lglGt~~~------~~~~~~~~v~~Al~~-----Gi~~~DTA~~YgsE~~lG~al~~~~~~g~-~~R~~v~I~TK~ 102 (335)
T 3h7u_A 35 KFPSVGLGTWQA------SPGLVGDAVAAAVKI-----GYRHIDCAQIYGNEKEIGAVLKKLFEDRV-VKREDLFITSKL 102 (335)
T ss_dssp EEESBCEECTTC------CHHHHHHHHHHHHHH-----TCCEEECCGGGSCHHHHHHHHHHHHHTTS-CCGGGCEEEEEE
T ss_pred EecceeEeCCcC------CHHHHHHHHHHHHHc-----CCCEEECCcccCCHHHHHHHHHHHHhcCC-CCcceeEEEeee
Confidence 489999999963 457788888888666 599999999 5599999999997421100 011133444444
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC--------------CchHHHHHHHHHHHHHcCcccEEecCc
Q 020082 82 VPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS--------------NPGYLDALNHLTDLKEEGKIKTVALTN 147 (331)
Q Consensus 82 ~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~--------------~~~~~e~~~~l~~l~~~Gkir~iGvS~ 147 (331)
++. +.+++.+++++++||+|||+||||+|++|||+.. .+ .+++|++|++|+++||||+|||||
T Consensus 103 ~~~--~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn 179 (335)
T 3h7u_A 103 WCT--DHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVD-IPSTWKAMEALYDSGKARAIGVSN 179 (335)
T ss_dssp CGG--GCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCC-HHHHHHHHHHHHHTTSBSSEEEES
T ss_pred CCC--CCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCC-HHHHHHHHHHHHHcCCccEEEecC
Confidence 332 3578999999999999999999999999999642 23 789999999999999999999999
Q ss_pred ccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCCCCCchh
Q 020082 148 FDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSL 226 (331)
Q Consensus 148 ~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~~~~~~~ 226 (331)
|++++++++++. .++++++|++||++.+. .+++++|+++||++++|+||++|.+. +.. +..
T Consensus 180 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~-----------~~~-----~~~ 241 (335)
T 3h7u_A 180 FSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTT-----------WLK-----SDV 241 (335)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCT-----------TSC-----CCG
T ss_pred CCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCC-----------CCC-----ccc
Confidence 999999999874 47899999999998775 58999999999999999999986321 000 000
Q ss_pred HHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHH
Q 020082 227 QKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVN 306 (331)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~ 306 (331)
. ..+.+.++|+++|+|++|+||+|+++++ +++|+|+++ ++||++|+++++.+|++++++
T Consensus 242 ~-----------------~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g~~~--~~~l~enl~a~~~~L~~e~~~ 300 (335)
T 3h7u_A 242 L-----------------KNPILNMVAEKLGKSPAQVALRWGLQMG--HSVLPKSTN--EGRIKENFNVFDWSIPDYMFA 300 (335)
T ss_dssp G-----------------GCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCSC--HHHHHHHHCCSSCCCCHHHHH
T ss_pred c-----------------ccHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeCCCC--HHHHHHHHhhCCCCcCHHHHH
Confidence 0 0168999999999999999999999998 589999999 999999999999999999999
Q ss_pred HHHHHhhcC
Q 020082 307 SIQEVTKKG 315 (331)
Q Consensus 307 ~l~~~~~~~ 315 (331)
+|+++....
T Consensus 301 ~i~~l~~~~ 309 (335)
T 3h7u_A 301 KFAEIEQAR 309 (335)
T ss_dssp HGGGSCCCC
T ss_pred HHHhHhhcC
Confidence 999997653
No 37
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=1.2e-52 Score=385.79 Aligned_cols=260 Identities=20% Similarity=0.242 Sum_probs=211.3
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||+ .+.+++.++|+.|++. ||||||||+ +.+|+.+|++|++. +|+ .+++++
T Consensus 15 ~v~~lglGt~~------~~~~~~~~~v~~Al~~-----G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~---~~~i~T 80 (322)
T 1mi3_A 15 LMPSIGFGCWK------LANATAGEQVYQAIKA-----GYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKRE---EIFLTS 80 (322)
T ss_dssp EEESBCEECTT------CCHHHHHHHHHHHHHT-----TCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGG---GCEEEE
T ss_pred EECCeeeeCCc------CCHHHHHHHHHHHHHc-----CCCEEEccccccCHHHHHHHHHHHhhcCCCChh---hEEEEE
Confidence 48999999985 3567788888888665 599999999 55899999999873 333 344444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC-------------------------CCchHHHHHHH
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY-------------------------SNPGYLDALNH 130 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~-------------------------~~~~~~e~~~~ 130 (331)
| .++. ..+++.+++++++||+|||+||||+|++|||+. ..+ ++++|++
T Consensus 81 K----~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~e~~~a 153 (322)
T 1mi3_A 81 K----LWNN--YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVP-ILETWKA 153 (322)
T ss_dssp E----ECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCC-HHHHHHH
T ss_pred e----eCCC--CCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCC-HHHHHHH
Confidence 4 3332 358999999999999999999999999999953 123 7899999
Q ss_pred HHHHHHcCcccEEecCcccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccC
Q 020082 131 LTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLD 209 (331)
Q Consensus 131 l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~ 209 (331)
|++|+++||||+||||||++++++++++. .++++++|++||++.+. .+++++|+++||++++|+||++|.+. .
T Consensus 154 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~----~ 227 (322)
T 1mi3_A 154 LEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSFGPQSFV----E 227 (322)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTHHHH----T
T ss_pred HHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECCCCCCCcc----c
Confidence 99999999999999999999999999975 46899999999998764 58999999999999999999999332 1
Q ss_pred CCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHH
Q 020082 210 TNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHI 289 (331)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l 289 (331)
.....+.. .+.. . ..+.++++|+++|+|++|+||+|+++++ + ++|+|+++ ++||
T Consensus 228 ~~~~~~~~-----~~~~---------------~--~~~~l~~iA~~~g~t~aqvaL~w~l~~~-~-~vI~g~~~--~~~l 281 (322)
T 1mi3_A 228 MNQGRALN-----TPTL---------------F--AHDTIKAIAAKYNKTPAEVLLRWAAQRG-I-AVIPKSNL--PERL 281 (322)
T ss_dssp TTCHHHHT-----SCCT---------------T--SCHHHHHHHHHHTCCHHHHHHHHHHTTT-C-EECCCCCS--HHHH
T ss_pred cccccccc-----Cccc---------------c--cCHHHHHHHHHcCCCHHHHHHHHHHhCC-C-EEEcCCCC--HHHH
Confidence 00000000 0000 0 0168899999999999999999999998 3 89999999 9999
Q ss_pred HHhhchhcCCCCHHHHHHHHHHhhcC
Q 020082 290 QDTNAIFMLSLDEDDVNSIQEVTKKG 315 (331)
Q Consensus 290 ~e~~~a~~~~L~~~~~~~l~~~~~~~ 315 (331)
++|+++++.+||+++++.|+++....
T Consensus 282 ~en~~~~~~~L~~e~~~~l~~~~~~~ 307 (322)
T 1mi3_A 282 VQNRSFNTFDLTKEDFEEIAKLDIGL 307 (322)
T ss_dssp HHTTSCCSSCCCHHHHHHHHTTCCCC
T ss_pred HHHHhhcCCCcCHHHHHHHHhhcccC
Confidence 99999999999999999999987543
No 38
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=7.9e-53 Score=385.15 Aligned_cols=253 Identities=18% Similarity=0.248 Sum_probs=211.3
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+|||||++|+. +.+++.++|+.|++. ||||||||+ +.+|+.||++|++. +|+ .+++.+
T Consensus 19 ~v~~lglGt~~~~~----~~~~~~~~v~~Al~~-----G~~~iDTA~~YgsE~~vG~al~~~~~~g~~~R~---~~~i~T 86 (312)
T 1zgd_A 19 KMPVVGMGSAPDFT----CKKDTKDAIIEAIKQ-----GYRHFDTAAAYGSEQALGEALKEAIELGLVTRD---DLFVTS 86 (312)
T ss_dssp EEESBCBCCSCCTT----CCSCHHHHHHHHHHH-----TCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGG---GCEEEE
T ss_pred CCCceeEcCcccCC----CHHHHHHHHHHHHHc-----CCCEEECccccCCHHHHHHHHHHHHhcCCCcch---heEEEe
Confidence 48999999954332 346788888888766 599999999 55899999999973 333 344444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC----------------CCchHHHHHHHHHHHHHcCc
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY----------------SNPGYLDALNHLTDLKEEGK 139 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~----------------~~~~~~e~~~~l~~l~~~Gk 139 (331)
|.++. +.+++.+++++++||+|||+||||+|++|||+. ..+ .+++|++|++|+++||
T Consensus 87 ----K~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~-~~e~~~ale~l~~~Gk 159 (312)
T 1zgd_A 87 ----KLWVT--ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFD-VKGVWESMEESLKLGL 159 (312)
T ss_dssp ----EECGG--GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCC-HHHHHHHHHHHHHTTS
T ss_pred ----ccCCC--CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCcccccccccccccccc-HHHHHHHHHHHHHcCC
Confidence 44332 357899999999999999999999999999964 134 7899999999999999
Q ss_pred ccEEecCcccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCC
Q 020082 140 IKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAG 218 (331)
Q Consensus 140 ir~iGvS~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~ 218 (331)
||+||||||++++++++++. .++|+++|++||++++. .+++++|+++||++++|+||++|.+.+. +
T Consensus 160 ir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~~--------~--- 226 (312)
T 1zgd_A 160 TKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGASRGP--------N--- 226 (312)
T ss_dssp BSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTTTTSS--------C---
T ss_pred CCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCCCCCC--------c---
Confidence 99999999999999999875 46899999999999875 5799999999999999999998864320 0
Q ss_pred CCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcC
Q 020082 219 PPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 298 (331)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~ 298 (331)
..+. .+.+.++|+++|+|++|+||+|+++++ + ++|+|+++ ++||++|+++++.
T Consensus 227 ~~~~-----------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g~~~--~~~l~en~~~~~~ 279 (312)
T 1zgd_A 227 EVME-----------------------NDMLKEIADAHGKSVAQISLRWLYEQG-V-TFVPKSYD--KERMNQNLRIFDW 279 (312)
T ss_dssp TTTT-----------------------CHHHHHHHHHHTSCHHHHHHHHHHHTT-C-EECCCCCS--HHHHHHTTCCSSC
T ss_pred cccc-----------------------cHHHHHHHHHcCCCHHHHHHHHHHHCC-C-EEEeCCCC--HHHHHHHHHhccC
Confidence 0000 168899999999999999999999995 4 79999999 9999999999999
Q ss_pred CCCHHHHHHHHHHhhc
Q 020082 299 SLDEDDVNSIQEVTKK 314 (331)
Q Consensus 299 ~L~~~~~~~l~~~~~~ 314 (331)
+||++++++|+++...
T Consensus 280 ~L~~e~~~~l~~~~~~ 295 (312)
T 1zgd_A 280 SLTKEDHEKIAQIKQN 295 (312)
T ss_dssp CCCHHHHHHHTTSCCC
T ss_pred CCCHHHHHHHHHHhcc
Confidence 9999999999998754
No 39
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=3.9e-52 Score=384.16 Aligned_cols=248 Identities=15% Similarity=0.244 Sum_probs=209.8
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHH-HhhhcCCccEEECCC-CchHHHHHHHHhhh-----hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRS-HHLRHGRSLSFDFVD-GPAEDLYGIFINRV-----RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~-~~~~~GGin~~DTA~-g~sE~~lG~~l~~~-----~~~~~~~~~~~~ 75 (331)
.||+||||||+ .+ +++.++|+.|++ . |||+||||+ +.+|+.||++|++. +|+ .+++
T Consensus 47 ~vp~lglGt~~------~~-~~~~~~l~~Al~~~-----Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~~R~---~v~I-- 109 (344)
T 2bgs_A 47 AMPAVGLGTWR------AG-SDTAHSVRTAITEA-----GYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRK---DLFV-- 109 (344)
T ss_dssp EEESBCEECTT------CG-GGHHHHHHHHHHTT-----CCCEEECCGGGTCHHHHHHHHHHHHHTTCCGG---GCEE--
T ss_pred ccCCeeEeCCC------Cc-HHHHHHHHHHHHhc-----CCCEEECCCccCCHHHHHHHHHHhhhcCCCcc---cEEE--
Confidence 48999999985 24 778888888866 5 599999999 55799999999873 333 3444
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCC---------------CCchHHHHHHHHHHHHHcCcc
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY---------------SNPGYLDALNHLTDLKEEGKI 140 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~---------------~~~~~~e~~~~l~~l~~~Gki 140 (331)
.||.++. ..+++.+++++++||+||||||||+|+||||+. ..+ ++++|++|++|+++|||
T Consensus 110 --~TK~~~~--~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~-~~e~~~aLe~l~~~GkI 184 (344)
T 2bgs_A 110 --TSKIWCT--NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFD-MEGVWKEMENLVKDGLV 184 (344)
T ss_dssp --EEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCC-HHHHHHHHHHHHHTTSE
T ss_pred --EeccCCC--CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCC-HHHHHHHHHHHHHcCCc
Confidence 4444332 358999999999999999999999999999963 124 78999999999999999
Q ss_pred cEEecCcccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCC
Q 020082 141 KTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGP 219 (331)
Q Consensus 141 r~iGvS~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~ 219 (331)
|+||||||++++++++++. +++++++|++||++.+. .+++++|+++||++++|+||++|- |.
T Consensus 185 r~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G~------------~~--- 247 (344)
T 2bgs_A 185 KDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSSE------------KN--- 247 (344)
T ss_dssp EEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTTT------------TC---
T ss_pred cEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCCC------------ch---
Confidence 9999999999999999875 46899999999998764 579999999999999999999881 00
Q ss_pred CCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCC
Q 020082 220 PLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLS 299 (331)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~ 299 (331)
.+. .+.+.++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+++++.+
T Consensus 248 ~~~-----------------------~~~l~~iA~~~g~s~aqvaL~w~l~~~--~~vI~gs~~--~~~l~eNl~a~~~~ 300 (344)
T 2bgs_A 248 LAH-----------------------DPVVEKVANKLNKTPGQVLIKWALQRG--TSVIPKSSK--DERIKENIQVFGWE 300 (344)
T ss_dssp CTT-----------------------CHHHHHHHHHHTCCHHHHHHHHHHHHT--CEECCBCSS--HHHHHHTTCCSSCC
T ss_pred hhc-----------------------cHHHHHHHHHhCCCHHHHHHHHHHhCC--CeEEECCCC--HHHHHHHHHhcCCC
Confidence 000 068899999999999999999999998 489999999 99999999999999
Q ss_pred CCHHHHHHHHHHhhcCC
Q 020082 300 LDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 300 L~~~~~~~l~~~~~~~~ 316 (331)
||++++++|+++....+
T Consensus 301 Ls~ee~~~l~~l~~~~~ 317 (344)
T 2bgs_A 301 IPEEDFKVLCSIKDEKR 317 (344)
T ss_dssp CCHHHHHHHHHSCTTCC
T ss_pred CCHHHHHHHHHHhhcCC
Confidence 99999999999986644
No 40
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=3.4e-52 Score=383.33 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=208.3
Q ss_pred cccceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCC-CchHHHHHHHHhhh------hcCCCccchhee
Q 020082 3 SVERDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD-GPAEDLYGIFINRV------RRERPPEFLDKV 75 (331)
Q Consensus 3 ~vS~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~-g~sE~~lG~~l~~~------~~~~~~~~~~~~ 75 (331)
.||+||||||. ++.++|+.|++. |||+||||+ +.+|+.+|++|++. +|+ .++
T Consensus 35 ~vs~lglGt~~----------~~~~~v~~Al~~-----Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~---~v~--- 93 (331)
T 3h7r_A 35 KLPCVGLGTYA----------MVATAIEQAIKI-----GYRHIDCASIYGNEKEIGGVLKKLIGDGFVKRE---ELF--- 93 (331)
T ss_dssp EEESBEEECTT----------CCHHHHHHHHHH-----TCCEEECCGGGSCHHHHHHHHHHHHHTTSSCGG---GCE---
T ss_pred EecCEeeccHH----------HHHHHHHHHHHc-----CCCEEECccccCCHHHHHHHHHHHhhcCCCCch---hEE---
Confidence 48999999985 566788888666 599999999 55999999999974 333 344
Q ss_pred eecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCC--------------CchHHHHHHHHHHHHHcCccc
Q 020082 76 RGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS--------------NPGYLDALNHLTDLKEEGKIK 141 (331)
Q Consensus 76 ~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~--------------~~~~~e~~~~l~~l~~~Gkir 141 (331)
+.||+++. +.+++.+++++++||+|||+||||+|++|||+.. .+ .+++|++|++|+++||||
T Consensus 94 -I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~-~~e~~~aL~~l~~~Gkir 169 (331)
T 3h7r_A 94 -ITSKLWSN--DHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPD-ITSTWKAMEALYDSGKAR 169 (331)
T ss_dssp -EEEEECGG--GCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCC-HHHHHHHHHHHHHTTSBS
T ss_pred -EEEeeCCC--CCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCC-HHHHHHHHHHHHHcCCCc
Confidence 44444332 3578999999999999999999999999999642 33 789999999999999999
Q ss_pred EEecCcccHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEEccccccccccccccCCCCCCCCCCCC
Q 020082 142 TVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPP 220 (331)
Q Consensus 142 ~iGvS~~~~~~l~~~~~~-~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~~~~~~~~~~ 220 (331)
+||||||++++++++++. .++++++|++||++.+. .+++++|+++||++++|+||++|... +
T Consensus 170 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g~~~-----------~---- 232 (331)
T 3h7r_A 170 AIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQSKG-----------E---- 232 (331)
T ss_dssp SEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCSCTT-----------T----
T ss_pred EEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCCCCC-----------C----
Confidence 999999999999999875 47899999999998775 58999999999999999999986210 0
Q ss_pred CCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCC
Q 020082 221 LNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSL 300 (331)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L 300 (331)
..+.. + ..+.++++|+++|+|++|+||+|+++++ .++|+|+++ ++||++|+++++.+|
T Consensus 233 -~~~~~--~---------------~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g~~~--~~~l~en~~a~~~~L 290 (331)
T 3h7r_A 233 -VRLKV--L---------------QNPIVTEVAEKLGKTTAQVALRWGLQTG--HSVLPKSSS--GARLKENLDVFDWSI 290 (331)
T ss_dssp -TTHHH--H---------------TCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCCCSC--HHHHHHHTCCSSCCC
T ss_pred -Cccch--h---------------cCHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeCCCC--HHHHHHHHhhCCCCc
Confidence 00000 0 0178999999999999999999999998 589999999 999999999999999
Q ss_pred CHHHHHHHHHHhhc
Q 020082 301 DEDDVNSIQEVTKK 314 (331)
Q Consensus 301 ~~~~~~~l~~~~~~ 314 (331)
|++++++|+++...
T Consensus 291 ~~ee~~~l~~l~~~ 304 (331)
T 3h7r_A 291 PEDLFTKFSNIPQE 304 (331)
T ss_dssp CHHHHGGGGGSCCC
T ss_pred CHHHHHHHHHhhhc
Confidence 99999999999765
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.35 E-value=4.3e-07 Score=91.69 Aligned_cols=132 Identities=10% Similarity=0.048 Sum_probs=96.5
Q ss_pred HHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEE--ecCcccH---H----------------HHHH
Q 020082 97 IDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV--ALTNFDT---E----------------RLRI 155 (331)
Q Consensus 97 ~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~i--GvS~~~~---~----------------~l~~ 155 (331)
++.||.+|++||+|| ++|..+... .+++++++++++.+|+|+++ |+|++.. + ...+
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~~--~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~ 307 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVAG--VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELK 307 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCHH--HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHH
T ss_pred eeccccccCCCCceE-EEECCcCcc--HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHH
Confidence 567899999999999 587655432 46899999999999999999 4454444 1 2333
Q ss_pred HHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEcccccc-ccccccccCCCCCCCCCCCCCCCchhHHHHhhhh
Q 020082 156 ILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG-GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVD 234 (331)
Q Consensus 156 ~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~-G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
+++.| .++++++.||-.+ .++++.|.+.|++|++.+|.++ |.+..
T Consensus 308 ~i~tG-a~dv~vV~~n~i~----~~ll~~a~~~Gm~Vit~sp~~~~Grpd~----------------------------- 353 (807)
T 3cf4_A 308 VIRSG-MPDVIVVDEQCVR----GDIVPEAQKLKIPVIASNPKIMYGLPNR----------------------------- 353 (807)
T ss_dssp HHHHT-CCSEEEECSSSCC----TTHHHHHHHTTCCEEECSTTCCTTCCBC-----------------------------
T ss_pred HhhcC-CCeEEEEEecCCC----hHHHHHHHHCCCEEEEechhhhcCCCcc-----------------------------
Confidence 44455 5888999999764 2688999999999999999876 43210
Q ss_pred ccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHH
Q 020082 235 AWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHI 289 (331)
Q Consensus 235 ~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l 289 (331)
.+ .+++.+++|+++++...++++|+.+ +.++
T Consensus 354 ---------------------~d-~~~~~~le~LLs~~~~~~l~~g~~~--~~el 384 (807)
T 3cf4_A 354 ---------------------TD-ADVDETMEELKSGKIPGCVMLDYDK--LGEL 384 (807)
T ss_dssp ---------------------TT-SCHHHHHHHHHTTSSSEEECCCHHH--HHHH
T ss_pred ---------------------cc-chHHHHHHHHHhCCCCCceeeCCcc--HHHH
Confidence 01 2267899999998865556677766 6664
No 42
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=92.27 E-value=5 Score=34.45 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=70.1
Q ss_pred CCCHHHHHHHHHHHHH-HcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeee
Q 020082 87 KMTSSIVRESIDVSRR-RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~-rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~ 165 (331)
..+.+...+..+-.++ -++++.|-|..+..+....++..+++++.+.|+++|..- +=+++-++...+++.+.| +++
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~V-lpy~~dd~~~akrl~~~G--~~a 159 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDV-MVYTSDDPIIARQLAEIG--CIA 159 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEE-EEEECSCHHHHHHHHHSC--CSE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhC--CCE
Confidence 4688888888888888 889998888877777777777899999999999999753 333555677777777655 333
Q ss_pred ecccccccccC---hhhhHHHHHHHh-CCeEEE
Q 020082 166 NQVQHSVVDMR---PQQKMAELCQLT-GVKLIT 194 (331)
Q Consensus 166 vq~~~nl~~~~---~~~~~~~~~~~~-gi~via 194 (331)
+...=.+.--. ...++++...+. ++.||+
T Consensus 160 VmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~ 192 (265)
T 1wv2_A 160 VMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp EEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred EEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE
Confidence 32211111000 012455555554 677776
No 43
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=80.94 E-value=6.4 Score=35.37 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEE-----EEecCCCCCchHHHHHHHHHHHHHc-CcccEEec---CcccHHHHHHHHH
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDML-----QFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVAL---TNFDTERLRIILE 158 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~-----~lH~~d~~~~~~~e~~~~l~~l~~~-Gkir~iGv---S~~~~~~l~~~~~ 158 (331)
++.+...+ +-+.|.++|+|+|.+= -.-.|+. .+.....++.++++++. ..++...+ .......++++.+
T Consensus 27 ~~~e~k~~-i~~~L~~~Gvd~IEvG~~~g~p~ssp~~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 27 YTLDDVRA-IARALDKAKVDSIEVAHGDGLQGSSFNY-GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCHHHHHH-HHHHHHHHTCSEEECSCTTSTTCCBTTT-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCHHHHHH-HHHHHHHcCCCEEEEecCCCCCCCCCcc-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 45554444 4455788999888882 2222221 11122355666666654 24555554 2224667888888
Q ss_pred cCCCeeeecccccccccChhhhHHHHHHHhCCeEEEc
Q 020082 159 NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 159 ~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~ 195 (331)
.|++...+-...|-. +.-.+.+++|+++|+.++..
T Consensus 105 aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 105 AGARVVRVATHCTEA--DVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEEEEE
T ss_pred CCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEEEEE
Confidence 775543333333332 22357899999999987755
No 44
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.47 E-value=10 Score=33.31 Aligned_cols=105 Identities=11% Similarity=0.116 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeec
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
++.+. +..+-+.|.++|+++|..-....|.. .+.+.+.++.+..+.+...+...++. -+.+.++++++.|.+...+-
T Consensus 27 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG~~~v~i~ 103 (302)
T 2ftp_A 27 IEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKW-VPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESGVKEVAVF 103 (302)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTTCCEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCccc-cccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCCcCEEEEE
Confidence 45554 45555678999999999987554431 12122333444555555566666665 47788999988765432221
Q ss_pred cccccc------ccCh------hhhHHHHHHHhCCeEEEc
Q 020082 168 VQHSVV------DMRP------QQKMAELCQLTGVKLITY 195 (331)
Q Consensus 168 ~~~nl~------~~~~------~~~~~~~~~~~gi~via~ 195 (331)
..-|-. +... -.+++++|+++|+.+.+.
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 111110 1111 147899999999988654
No 45
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=77.10 E-value=9.5 Score=33.63 Aligned_cols=104 Identities=14% Similarity=0.207 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeec
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
++.+. +..+-+.|.++|+++|.+-+.-.|.. .+.+.+..+.+..+.+...++..++.. +...++.+.+.+.+...+-
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~l~~-~~~~i~~a~~~g~~~v~i~ 101 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKW-IPALRDAIDVAKGIDREKGVTYAALVP-NQRGLENALEGGINEACVF 101 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTCEEEEECC-SHHHHHHHHHHTCSEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCccc-ccccCCHHHHHHHhhhcCCCeEEEEeC-CHHhHHHHHhCCcCEEEEE
Confidence 45554 55566678999999999987655532 121222334455555555666667663 5677888888765432222
Q ss_pred cc-------ccccccChh------hhHHHHHHHhCCeEEEc
Q 020082 168 VQ-------HSVVDMRPQ------QKMAELCQLTGVKLITY 195 (331)
Q Consensus 168 ~~-------~nl~~~~~~------~~~~~~~~~~gi~via~ 195 (331)
.. .|+ ++..+ .+.++++++.|+.+.++
T Consensus 102 ~~~sd~~~~~~l-~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 102 MSASETHNRKNI-NKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp EESSHHHHHTTT-CSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eecCHHHHHHHh-CCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 22 222 11111 46899999999988654
No 46
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=74.74 E-value=42 Score=30.21 Aligned_cols=74 Identities=4% Similarity=-0.054 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 127 ALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 127 ~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
-++.+.+++++-.|--++- +.++++.++++++.+ .++++|+..+..-- .....+...|+++|+.++..+.+.++
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADR-GAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHT-CCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 4667778887766654443 346889999998865 58888887765321 22357899999999999988644443
No 47
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=74.26 E-value=44 Score=30.14 Aligned_cols=102 Identities=12% Similarity=0.089 Sum_probs=66.0
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVS 165 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~ 165 (331)
.++.+...+-++ .|+.++.++| ..|-+ + +-++.+.++++.-.|--++-- .++++.++++++.+ .+++
T Consensus 200 ~~~~~~a~~~~~-~l~~~~i~~i-----EqP~~--~---~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~-~~d~ 267 (384)
T 2pgw_A 200 GWSVHDAINMCR-KLEKYDIEFI-----EQPTV--S---WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQR-AADM 267 (384)
T ss_dssp CCCHHHHHHHHH-HHGGGCCSEE-----ECCSC--T---TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHH-HHHhcCCCEE-----eCCCC--h---hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCE
Confidence 356666555444 5777776644 44432 1 246667777776566555444 46889999999865 5788
Q ss_pred ecccccccc-cChhhhHHHHHHHhCCeEEEcccccc
Q 020082 166 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMG 200 (331)
Q Consensus 166 vq~~~nl~~-~~~~~~~~~~~~~~gi~via~~~l~~ 200 (331)
+|+.-+-+- -.....+...|+++|+.++..+.+..
T Consensus 268 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 268 ICIGPREIGGIQPMMKAAAVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCSCC
T ss_pred EEEcchhhCCHHHHHHHHHHHHHCCCeEeeccCcCC
Confidence 888765431 12235789999999999998874433
No 48
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=73.44 E-value=7.1 Score=36.54 Aligned_cols=61 Identities=25% Similarity=0.354 Sum_probs=49.8
Q ss_pred HHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCC--eeeeccc
Q 020082 101 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP--VVSNQVQ 169 (331)
Q Consensus 101 L~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~--~~~vq~~ 169 (331)
-+|+.+-|+|.+ ..+++++++...+.+++|+...||+-..-.+.+.++++.++. +..-|..
T Consensus 204 ~~R~~~gyld~~--------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTS 266 (557)
T 1uwk_A 204 DFRLETRYVDEQ--------ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQTS 266 (557)
T ss_dssp HHHHHTTSCCEE--------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECCCSC
T ss_pred HHHHhCCCceeE--------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcc
Confidence 467778899985 223889999999999999999999999999999999987754 4455654
No 49
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=72.48 E-value=6.3 Score=34.44 Aligned_cols=104 Identities=8% Similarity=0.036 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeec
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
++.+. +..+-+.|..+|+++|.+-....+... |.+++.++.+..+.+...++...+. -+...++++.+.|.+. +.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~~--V~ 97 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWV-PQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHADE--IA 97 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTC-GGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCSE--EE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCcccc-ccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCCE--EE
Confidence 45554 445555678899999888755444321 2123456667777665566666665 4677888888876443 33
Q ss_pred cccccc--------ccChh------hhHHHHHHHhCCeEEEcc
Q 020082 168 VQHSVV--------DMRPQ------QKMAELCQLTGVKLITYG 196 (331)
Q Consensus 168 ~~~nl~--------~~~~~------~~~~~~~~~~gi~via~~ 196 (331)
+....- .+..+ .+++++|++.|+.+.++-
T Consensus 98 i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l 140 (295)
T 1ydn_A 98 VFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYV 140 (295)
T ss_dssp EEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 321110 11111 357899999999887543
No 50
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=71.92 E-value=7.2 Score=36.48 Aligned_cols=61 Identities=30% Similarity=0.400 Sum_probs=49.8
Q ss_pred HHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCC--eeeeccc
Q 020082 101 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP--VVSNQVQ 169 (331)
Q Consensus 101 L~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~--~~~vq~~ 169 (331)
-+|+.+-|+|.+ ..+++++++...+.+++|+...||+-..-.+.+.++++.++. +..-|..
T Consensus 199 ~~R~~~gyld~~--------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTS 261 (551)
T 1x87_A 199 QRRIDTNYLDTM--------TDSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTS 261 (551)
T ss_dssp HHHHHTTSCSEE--------ESCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSC
T ss_pred HHHHhCCCceeE--------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcc
Confidence 467778899985 123789999999999999999999999999999999987754 4455654
No 51
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=71.09 E-value=16 Score=32.45 Aligned_cols=90 Identities=8% Similarity=0.080 Sum_probs=56.1
Q ss_pred HHcCCCcccEEEE-ecCCCCCchHHHHHHHHHHHHHcCcccEEecC-----cccHHHHHHHHHcC--CCeeeeccccccc
Q 020082 102 RRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-----NFDTERLRIILENG--IPVVSNQVQHSVV 173 (331)
Q Consensus 102 ~rLg~d~lDl~~l-H~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-----~~~~~~l~~~~~~~--~~~~~vq~~~nl~ 173 (331)
+..|.|.||+-.- -+|+......++..+.++.+++.=.+ -|-|- +++++.++++++.+ ....++-+...
T Consensus 91 ~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~-- 167 (323)
T 4djd_D 91 AEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQE-- 167 (323)
T ss_dssp HTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTT--
T ss_pred HHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcc--
Confidence 6779998887533 23432222246666677777665222 23333 56778889888865 23344432221
Q ss_pred ccChhhhHHHHHHHhCCeEEEccc
Q 020082 174 DMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 174 ~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
+ ...+++.+++.|+.++++.|
T Consensus 168 -~--~~~m~~laa~~g~~vVlmh~ 188 (323)
T 4djd_D 168 -N--YKSLTAACMVHKHNIIARSP 188 (323)
T ss_dssp -B--CHHHHHHHHHHTCEEEEECS
T ss_pred -c--HHHHHHHHHHhCCeEEEEcc
Confidence 1 24799999999999999987
No 52
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=71.05 E-value=52 Score=28.56 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeec
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
++.+... .+-+.|.++|+++|.+-....|... |.+.+..+.+..+++...++..++. .+...++++.+.|.+...+-
T Consensus 24 ~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag~~~v~i~ 100 (298)
T 2cw6_A 24 VSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWV-PQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAGAKEVVIF 100 (298)
T ss_dssp CCHHHHH-HHHHHHHHTTCSEECCEECCCTTTC-GGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHH-HHHHHHHHcCcCEEEECCCcCcccc-cccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCCCCEEEEE
Confidence 4555544 5666789999999999875554311 1112223334444433334443443 46777888888765433332
Q ss_pred cccccc------ccCh------hhhHHHHHHHhCCeEEEc
Q 020082 168 VQHSVV------DMRP------QQKMAELCQLTGVKLITY 195 (331)
Q Consensus 168 ~~~nl~------~~~~------~~~~~~~~~~~gi~via~ 195 (331)
..-|-. .+.. -.+.+++++++|+.+.++
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 222211 1111 136789999999988654
No 53
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=70.55 E-value=7.2 Score=36.48 Aligned_cols=61 Identities=23% Similarity=0.325 Sum_probs=49.7
Q ss_pred HHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCC--eeeeccc
Q 020082 101 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP--VVSNQVQ 169 (331)
Q Consensus 101 L~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~--~~~vq~~ 169 (331)
-+|+.+-|+|.+ ..+++++++...+.+++|+...||+-..-.+.+.++++.++. +..-|..
T Consensus 200 ~~R~~~gyld~~--------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTS 262 (552)
T 2fkn_A 200 DKRIETKYCDRK--------TASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTDQTS 262 (552)
T ss_dssp HHHHHTTSCSEE--------ESCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECCCSC
T ss_pred HHHHhCCcceeE--------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcc
Confidence 467778899985 123789999999999999999999999999999999987754 4445654
No 54
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=70.52 E-value=47 Score=29.59 Aligned_cols=97 Identities=7% Similarity=-0.025 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.++.++| ..|-+ + +-++.+.+++++-.|--++-- .++++.++++++.+ .++++
T Consensus 200 ~~~~~a~~~~~~-l~~~~i~~i-----E~P~~--~---~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~-~~d~v 267 (359)
T 1mdl_A 200 LDVPAAIKRSQA-LQQEGVTWI-----EEPTL--Q---HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIG-ACRLA 267 (359)
T ss_dssp SCHHHHHHHHHH-HHHHTCSCE-----ECCSC--T---TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHHhCCCeE-----ECCCC--h---hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcC-CCCEE
Confidence 466766655555 788887755 34422 1 246777888877666555443 46889999998865 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
|+..+-+-. .....+...|+++|+.++..+
T Consensus 268 ~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 268 MPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp CCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred eecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 887665311 123578999999999988875
No 55
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=68.99 E-value=67 Score=29.02 Aligned_cols=98 Identities=8% Similarity=-0.042 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.++.++ +..|-+. +-++.+.+++++-.|--++- +.++++.++++++.+ .++++
T Consensus 205 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 272 (391)
T 2qgy_A 205 EDLDQTKSFLKE-VSSFNPYW-----IEEPVDG-----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRN-AADIF 272 (391)
T ss_dssp SCHHHHHHHHHH-HGGGCCSE-----EECSSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhcCCCe-----EeCCCCh-----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC-CCCEE
Confidence 566666655554 77777654 4444321 24666777777655644443 346889999999865 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
|+..+..-- .....+...|+++|+.++..+.
T Consensus 273 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 273 NPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp CCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 887665311 1235789999999999998875
No 56
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=64.21 E-value=69 Score=27.47 Aligned_cols=101 Identities=11% Similarity=-0.003 Sum_probs=64.6
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-CcccEEecCcccHHHHHHHHHc--CCCeee
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN--GIPVVS 165 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~--~~~~~~ 165 (331)
+.+.+.+..++.. .-|-|.||+-.--.. .. ..+.+...++.+++. +. -|-|-++.++.++++++. |.++ +
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~~--~e-E~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~i-I 104 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPTA--DD-PVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAM-I 104 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSCS--SC-HHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCE-E
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcCc--hh-HHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCE-E
Confidence 4455555554443 689999998643321 12 256677777777765 33 367778899999999986 6332 2
Q ss_pred ecccccccccChh--hhHHHHHHHhCCeEEEccccccc
Q 020082 166 NQVQHSVVDMRPQ--QKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 166 vq~~~nl~~~~~~--~~~~~~~~~~gi~via~~~l~~G 201 (331)
|- .|.. .+ .++++.+++.|+.++.+..-..|
T Consensus 105 Nd--vs~~---~d~~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 105 NS--TSAD---QWKMDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp EE--ECSC---HHHHHHHHHHHHHHTCEEEEESCBTTB
T ss_pred EE--CCCC---ccccHHHHHHHHHcCCCEEEEecCCCC
Confidence 22 2222 13 57999999999999998753233
No 57
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=64.03 E-value=40 Score=30.18 Aligned_cols=73 Identities=10% Similarity=0.145 Sum_probs=50.4
Q ss_pred HHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcccccc
Q 020082 127 ALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 200 (331)
Q Consensus 127 ~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~ 200 (331)
-++.+.+++++-.|--.+- +.++++.++++++.+ .++++|+..+-.-. .....+...|+++|+.++..+.+..
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 299 (369)
T 2p8b_A 225 DIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLE-AADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVES 299 (369)
T ss_dssp CHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred cHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC-CCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCcc
Confidence 4667778887766654433 446889999998865 57888877654311 1225789999999999988776533
No 58
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=62.89 E-value=91 Score=28.42 Aligned_cols=106 Identities=13% Similarity=0.052 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-----Ccc-cEEecCcccHHHHHHHHHcCC
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKI-KTVALTNFDTERLRIILENGI 161 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-----Gki-r~iGvS~~~~~~l~~~~~~~~ 161 (331)
++++...+-++. |+.++.. +++ +|-.|-+... ..+-++.+.+|.++ -.| -..|=+.++.+.++++++.+
T Consensus 249 ~~~~~A~~~~~~-L~~~~~~-~~l-~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~- 323 (413)
T 1kko_A 249 MDPVRCAEYIAS-LEKEAQG-LPL-YIEGPVDAGN-KPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAG- 323 (413)
T ss_dssp TCHHHHHHHHHH-TGGGGTT-SCE-EEECCCCCSS-HHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTT-
T ss_pred CCHHHHHHHHHH-HHhccCC-cce-EEECCcCCCC-CcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhC-
Confidence 455554433332 4444432 665 7777754321 13456777777765 333 35556678899999998865
Q ss_pred Ceeeeccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 162 PVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 162 ~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
.++++|+..+-+-- .....+...|+++|+.++..+..
T Consensus 324 a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 324 SCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp CCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 58888887765422 12357999999999999998764
No 59
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=62.02 E-value=14 Score=33.57 Aligned_cols=102 Identities=14% Similarity=0.070 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.++.++| ..|-+ + +-++.+.+++++-.|--++-- .++++.++++++.+ .++++
T Consensus 219 ~~~~~a~~~~~~-l~~~~i~~i-----EqP~~--~---~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v 286 (388)
T 2nql_A 219 QTPERALELIAE-MQPFDPWFA-----EAPVW--T---EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERC-RIAIV 286 (388)
T ss_dssp SCHHHHHHHHHH-HGGGCCSCE-----ECCSC--T---TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTS-CCSEE
T ss_pred CCHHHHHHHHHH-HhhcCCCEE-----ECCCC--h---hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEE
Confidence 466666665554 777776654 34422 1 246777888877666544443 46889999998755 57888
Q ss_pred cccccccccChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+.---.....+...|+++|+.++..+.+.++
T Consensus 287 ~ik~~~GGit~~~~i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 287 QPEMGHKGITNFIRIGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHTCEECCCCCSSCS
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCeEEeecCCCcH
Confidence 87655411112257889999999999987554443
No 60
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=58.74 E-value=1e+02 Score=27.74 Aligned_cols=102 Identities=14% Similarity=0.081 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++ .|+.++.++| ..|-+. +-++.+.+++++-.|--.+ =+.++.+.++++++.+ .++++
T Consensus 200 ~~~~~a~~~~~-~l~~~~i~~i-----EqP~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 267 (397)
T 2qde_A 200 WTYDQALTTIR-ALEKYNLSKI-----EQPLPA-----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKG-AADGL 267 (397)
T ss_dssp CCHHHHHHHHH-HHGGGCCSCE-----ECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHT-CCSEE
T ss_pred CCHHHHHHHHH-HHHhCCCCEE-----ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEE
Confidence 56666655544 5777776644 444321 2466777787765554443 3446889999998765 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+..-- .....+...|+++|+.++..+.+.+|
T Consensus 268 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 268 MIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred EEeccccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 887654311 12257899999999999998755444
No 61
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=58.58 E-value=68 Score=27.78 Aligned_cols=121 Identities=7% Similarity=0.007 Sum_probs=71.3
Q ss_pred CchHHHHHHHHhhhhcCCCccchheeeecccccCCCC----CCCHHHHHHHHHHHHHHcC-CCcccEEEEecCCCCCchH
Q 020082 50 GPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPV----KMTSSIVRESIDVSRRRMD-VPCLDMLQFHWWDYSNPGY 124 (331)
Q Consensus 50 g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~i~~~~~~SL~rLg-~d~lDl~~lH~~d~~~~~~ 124 (331)
-.+++.+-+|..+.|. .++-.+|+......... ....+.+-+.+-++++-|+ -+.+..+++--|..-.++
T Consensus 54 ~p~~~t~~~W~~~tP~----~F~F~vKa~r~iTH~~rl~~~~~~~~~~~~~F~~~~~pL~~~~kLG~vL~Q~Ppsf~~~- 128 (289)
T 1vpy_A 54 IPPKERVAEWVKAVPE----NFRFVMKVYSGISCQGEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTFGCT- 128 (289)
T ss_dssp CCCHHHHHHHHHTSCT----TCEEEEECCTTTTTCSCGGGTCSSHHHHHHHHHHHTHHHHTTTCEEEEEEECCTTCCSC-
T ss_pred CCCHHHHHHHHHhCCC----CcEEEEEechheecccccCCccchhHHHHHHHHHHHHhhccCCCEEEEEEEcCCCCCCC-
Confidence 5678999999988775 46666666544433211 0123444355556777773 278898888887654442
Q ss_pred HHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeeccccc-ccccChhhhHHHHHHHhCCeEEEcc
Q 020082 125 LDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHS-VVDMRPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 125 ~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~n-l~~~~~~~~~~~~~~~~gi~via~~ 196 (331)
.+.++.|..+.+. .. +. ..++.++-. .++...++++++.++++||..+...
T Consensus 129 ~~~~~~L~~~~~~-------------------~~-~~-~~AvE~Rh~sW~~~~~~~~~~~lL~~~~v~~V~~D 180 (289)
T 1vpy_A 129 KENVAYLQKIRHW-------------------FK-DL-PIAIELRNNSWYQPNFVKQMLQFMKENQFSLVIVD 180 (289)
T ss_dssp HHHHHHHHHHHHH-------------------TT-TC-CEEEECCCGGGGSTTTHHHHHHHHHHTTCEECEEE
T ss_pred HHHHHHHHHHHHh-------------------cC-CC-CEEEEecChHHcCcccHHHHHHHHHHcCCEEEEeC
Confidence 4555566665532 00 22 344555422 2222234689999999999877643
No 62
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=58.47 E-value=1e+02 Score=27.50 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.++.++ +..|-+. +-++.+.+++++-.|--++ =+.++++.++++++.+ .++++
T Consensus 202 ~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v 269 (371)
T 2ovl_A 202 WTVDGAIRAARA-LAPFDLHW-----IEEPTIP-----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAG-SLTLP 269 (371)
T ss_dssp SCHHHHHHHHHH-HGGGCCSE-----EECCSCT-----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhcCCCE-----EECCCCc-----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC-CCCEE
Confidence 466666555554 77776554 4455322 2355666666654554443 3446889999998865 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
|+..+-.-. .....+...|+++|+.++..+.+
T Consensus 270 ~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 270 EPDVSNIGGYTTFRKVAALAEANNMLLTSHGVH 302 (371)
T ss_dssp CCCTTTTTSHHHHHHHHHHHHHTTCCEEECSCH
T ss_pred eeCccccCCHHHHHHHHHHHHHcCCeEccccHH
Confidence 887665311 12357899999999999987654
No 63
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=58.38 E-value=43 Score=30.45 Aligned_cols=100 Identities=9% Similarity=-0.039 Sum_probs=65.1
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~ 165 (331)
.++.+...+-++. |+.++.+++ ..|-+. +-++.+.+++++-.|--.+- +.++++.++++++.+ .+++
T Consensus 225 ~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~ 292 (407)
T 2o56_A 225 FTDTTSAIQFGRM-IEELGIFYY-----EEPVMP-----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENG-SLSV 292 (407)
T ss_dssp CSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS-----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh-----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcC-CCCE
Confidence 3567766665554 777776544 444321 23566777777655654443 345788999998865 5888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
+|+..+-.-- .....+...|+++|+.++..+..
T Consensus 293 v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 293 IQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 8887765311 12257899999999999987764
No 64
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=57.70 E-value=86 Score=27.33 Aligned_cols=100 Identities=11% Similarity=0.107 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEEe-cCCCC-Cch---HHHHHHHHHHHHHc-CcccEEecCcccHHHHHHHHHcCCCe
Q 020082 90 SSIVRESIDVSRRRMDVPCLDMLQFH-WWDYS-NPG---YLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPV 163 (331)
Q Consensus 90 ~~~i~~~~~~SL~rLg~d~lDl~~lH-~~d~~-~~~---~~e~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~~~~~ 163 (331)
.+.+.+..++.+ .-|-|.||+-.-- +|... ... ++.+...++.++++ +. -|-|-++.++.++++++.|.++
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 344444443333 5688888886432 23211 111 22345555666654 43 3677889999999999877433
Q ss_pred eeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 164 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 164 ~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
. +..|..+. +.++++.+++.|+.++.+..
T Consensus 139 I---Ndvsg~~~--d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I---NDIWGAKA--EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E---EETTTTSS--CTHHHHHHHHHTCCEEEECC
T ss_pred E---EECCCCCC--CHHHHHHHHHhCCcEEEEeC
Confidence 2 33333322 34789999999999998865
No 65
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=57.57 E-value=45 Score=30.22 Aligned_cols=99 Identities=8% Similarity=-0.070 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~ 165 (331)
.++.+...+-++. |+.++.++| ..|-+. +-++.+.+++++-.|--++- +.++++.++++++.+ .+++
T Consensus 217 ~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~ 284 (393)
T 2og9_A 217 QWDRPTAQRMCRI-FEPFNLVWI-----EEPLDA-----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHR-AADY 284 (393)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHHH-HHhhCCCEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCC-CCCE
Confidence 3577776666654 777776654 344221 23566777777655644433 446889999998865 5888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+|+..+-.-- .....+...|+++|+.++..+.
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPHFA 317 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEeccCc
Confidence 8887654311 1225789999999999987654
No 66
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=57.06 E-value=45 Score=28.40 Aligned_cols=159 Identities=10% Similarity=0.045 Sum_probs=83.3
Q ss_pred CCCchhhHHHHHHHHHHHhhhcCCccEEECCC--------CchHHHHHH--HHhhhhcCCCccchheeeecccccCCCCC
Q 020082 18 RPGRRRRCHASLRRCRSHHLRHGRSLSFDFVD--------GPAEDLYGI--FINRVRRERPPEFLDKVRGLTKWVPPPVK 87 (331)
Q Consensus 18 ~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~--------g~sE~~lG~--~l~~~~~~~~~~~~~~~~~~~k~~~~~~~ 87 (331)
|..+.+++.++++.|.+. |+..|=.++ ...|++... .+++..+.. ..-+++..+.. .+
T Consensus 15 G~~~~~~sl~~~~~a~~~-----G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~i~I~~G~E-----v~ 82 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQ-----GIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKE--DIPLHVLPGQE-----IR 82 (262)
T ss_dssp SCSSHHHHHHHHHHHHHT-----TCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHT--TCCCEEECCCE-----EE
T ss_pred CCCCHHHHHHHHHHHHHC-----CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhc--CCCCEEecCeE-----Ee
Confidence 345678888899999766 488787666 122333322 222221110 01122222221 12
Q ss_pred CCHHHHHHHHHH-HHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCc------ccHHHHHHHHHcC
Q 020082 88 MTSSIVRESIDV-SRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN------FDTERLRIILENG 160 (331)
Q Consensus 88 ~~~~~i~~~~~~-SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~------~~~~~l~~~~~~~ 160 (331)
+.++ +...+++ ++-.|+ --|.+++-.|....+ ..+.+.+..+++.|.+--||=-. ...+.+.++.+.|
T Consensus 83 ~~~~-~~~~l~~~~~~~l~--~~~~vl~e~~~~~~~--~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G 157 (262)
T 3qy7_A 83 IYGE-VEQDLAKRQLLSLN--DTKYILIEFPFDHVP--RYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG 157 (262)
T ss_dssp CCTT-HHHHHHTTCSCCGG--GSSEEEEECCTTCCC--TTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT
T ss_pred cchh-HHHHHhcCCCcEEC--CceEEEEeCCCccCH--HHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC
Confidence 3333 2333333 233332 224566665543332 45788899999999998887543 1335677777766
Q ss_pred CCeeeeccccccccc---ChhhhHHHHHHHhCCeEEEcc
Q 020082 161 IPVVSNQVQHSVVDM---RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~---~~~~~~~~~~~~~gi~via~~ 196 (331)
. .+|+..+.+.. .........|.+.|+.++.-|
T Consensus 158 ~---~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 158 A---ASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVAS 193 (262)
T ss_dssp C---EEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred C---EEEEECCccCcccchHHHHHHHHHHhCCCeEEEEc
Confidence 4 34544433321 112456777778888665444
No 67
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=56.55 E-value=43 Score=30.34 Aligned_cols=103 Identities=9% Similarity=0.041 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeec
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
++.+...+-+ +.|+.++ +++.++..|-+.. -++.+.+++++-.|-- |=|.++.+.++++++.+ .++++|
T Consensus 198 ~~~~~A~~~~-~~l~~~~---i~~~~iEqP~~~~-----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~-~~d~v~ 266 (391)
T 3gd6_A 198 LNWKDAHRAI-KRLTKYD---LGLEMIESPAPRN-----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKD-AIDIFN 266 (391)
T ss_dssp SCHHHHHHHH-HHHTTCC---SSCCEEECCSCTT-----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHT-CCSEEE
T ss_pred cCHHHHHHHH-HHHHhcC---CCcceecCCCChh-----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcC-CCCEEE
Confidence 4555443322 3345444 3336677664322 3566777877766655 88889999999999865 578888
Q ss_pred cccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 168 VQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 168 ~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
+..+-.-- .....+...|+++|+.++..+.+.++
T Consensus 267 ~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 267 ISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred ECchhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 77654311 12357899999999999987765444
No 68
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=56.54 E-value=35 Score=30.93 Aligned_cols=99 Identities=9% Similarity=-0.066 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.+ ++.++..|-+. +-++.+.+++++-.|--.+-- .++++.++++++.+ .++++
T Consensus 210 ~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v 277 (392)
T 2poz_A 210 LTTDETIRFCRK-IGEL-----DICFVEEPCDP-----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQ-ACGII 277 (392)
T ss_dssp SCHHHHHHHHHH-HGGG-----CEEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhc-----CCCEEECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCEE
Confidence 466655544444 5554 45566666432 235667777776566544433 45788899988755 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
|+..+-.-- .....+...|+++|+.++..+..
T Consensus 278 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 278 QPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp CCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 887665311 12357899999999999987764
No 69
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=54.16 E-value=72 Score=27.85 Aligned_cols=105 Identities=10% Similarity=-0.023 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc--Ccc-cEEecCcccHHHHHHHHH--cCCCe
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE--GKI-KTVALTNFDTERLRIILE--NGIPV 163 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~--Gki-r~iGvS~~~~~~l~~~~~--~~~~~ 163 (331)
+++.+.+..++.. .-|-|.||+=. .... .+ .++.+..+..+.+. ..+ --|-|-++.++.++++++ .|.+
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g~~~-v~-~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~- 108 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--DDGL-LD-ARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKS- 108 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--CCTT-SC-HHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCC-
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--CCCC-CC-HHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCC-
Confidence 4555555555433 57999999975 2211 22 23333333333321 011 146777899999999998 4632
Q ss_pred eeecccccccccCh-hhhHHHHHHHhCCeEEEccccccc
Q 020082 164 VSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 164 ~~vq~~~nl~~~~~-~~~~~~~~~~~gi~via~~~l~~G 201 (331)
.+|- .|.....+ -.++++.+++.|+.++.+.--..|
T Consensus 109 iINd--Is~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 109 IVNS--ISLKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp EEEE--ECSTTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred EEEe--CCcccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 2333 33332211 127999999999999998754344
No 70
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=53.74 E-value=84 Score=25.13 Aligned_cols=89 Identities=16% Similarity=0.248 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeeec
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~vq 167 (331)
+.+.+.+-++ .+..-| +|++-+|...+ ...+.++.+.+....+ ..||++ ..++++++.+.+.|.++.
T Consensus 20 ~~~~~~~~~~-~~~~~G---~~~iev~~~~~---~~~~~i~~ir~~~~~~--~~ig~~~v~~~~~~~~a~~~Gad~i--- 87 (205)
T 1wa3_A 20 SVEEAKEKAL-AVFEGG---VHLIEITFTVP---DADTVIKELSFLKEKG--AIIGAGTVTSVEQCRKAVESGAEFI--- 87 (205)
T ss_dssp SHHHHHHHHH-HHHHTT---CCEEEEETTST---THHHHHHHTHHHHHTT--CEEEEESCCSHHHHHHHHHHTCSEE---
T ss_pred CHHHHHHHHH-HHHHCC---CCEEEEeCCCh---hHHHHHHHHHHHCCCC--cEEEecccCCHHHHHHHHHcCCCEE---
Confidence 4565555444 355566 55556776432 2334455554443323 357884 478899988888775544
Q ss_pred ccccccccChhhhHHHHHHHhCCeEEE
Q 020082 168 VQHSVVDMRPQQKMAELCQLTGVKLIT 194 (331)
Q Consensus 168 ~~~nl~~~~~~~~~~~~~~~~gi~via 194 (331)
+.-+. ..++++.|++.|+.+++
T Consensus 88 v~~~~-----~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 88 VSPHL-----DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp ECSSC-----CHHHHHHHHHHTCEEEC
T ss_pred EcCCC-----CHHHHHHHHHcCCcEEC
Confidence 22111 24689999999999986
No 71
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=52.83 E-value=48 Score=29.63 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEE-ecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+. .+-++. |+.++.+ ++..|-+. +-++.+.+++++-.|--. |=+.++++.++++++.+ .++++
T Consensus 194 ~~~~~-~~~~~~-l~~~~i~-----~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v 260 (368)
T 1sjd_A 194 YTLGD-APQLAR-LDPFGLL-----LIEQPLEE-----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLG-AVQIV 260 (368)
T ss_dssp CCGGG-HHHHHT-TGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHH-HHHHHH-HHhcCCC-----eEeCCCCh-----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcC-CCCEE
Confidence 45555 443333 6666554 44555321 236667777776555433 33457889999998865 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+..-- .....+...|+++|+.++.-+-+..+
T Consensus 261 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 296 (368)
T 1sjd_A 261 NIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIETG 296 (368)
T ss_dssp EECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCCH
T ss_pred EecccccCCHHHHHHHHHHHHHcCCcEEeCCccccH
Confidence 887665311 12357899999999996665544333
No 72
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=52.60 E-value=1.2e+02 Score=26.63 Aligned_cols=92 Identities=11% Similarity=0.112 Sum_probs=50.9
Q ss_pred HHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-CcccEEecCcccHHHHHHHHHc----CCCeeee--
Q 020082 94 RESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN----GIPVVSN-- 166 (331)
Q Consensus 94 ~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~----~~~~~~v-- 166 (331)
+-.+-+.|.++|+++|.+-+ |. ..+ .-++.++++++. ..++..+++.-....++.+.+. +.+...+
T Consensus 30 Kl~ia~~L~~~Gv~~IE~g~---p~-~~~---~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 30 KIIVAKALDELGVDVIEAGF---PV-SSP---GDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp HHHHHHHHHHHTCSEEEEEC---TT-SCH---HHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeC---CC-CCH---hHHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 34455558999999999863 32 122 234555555554 3466667765556667666654 4332211
Q ss_pred -----cccccccccCh------hhhHHHHHHHhCCeEE
Q 020082 167 -----QVQHSVVDMRP------QQKMAELCQLTGVKLI 193 (331)
Q Consensus 167 -----q~~~nl~~~~~------~~~~~~~~~~~gi~vi 193 (331)
++.+|+ +... -.+.+++|++.|+.+.
T Consensus 103 s~Sd~~~~~~l-~~s~~e~l~~~~~~v~~a~~~g~~v~ 139 (325)
T 3eeg_A 103 GSSDIHIEHKL-RSTRENILEMAVAAVKQAKKVVHEVE 139 (325)
T ss_dssp ECSHHHHC-----CCCTTGGGTTHHHHHHHHTTSSEEE
T ss_pred cccHHHHHHHh-CCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 112222 1111 1368999999998865
No 73
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=52.45 E-value=70 Score=28.09 Aligned_cols=90 Identities=9% Similarity=0.021 Sum_probs=57.8
Q ss_pred HcCCCcccEEEE-ecCCCCCchHHHHHHHHHHHHHc-CcccEE-ecCc--ccHHHHHHHHHcCC--Ceeeeccccccccc
Q 020082 103 RMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEE-GKIKTV-ALTN--FDTERLRIILENGI--PVVSNQVQHSVVDM 175 (331)
Q Consensus 103 rLg~d~lDl~~l-H~~d~~~~~~~e~~~~l~~l~~~-Gkir~i-GvS~--~~~~~l~~~~~~~~--~~~~vq~~~nl~~~ 175 (331)
..|.|.||+=.- -.|+......++.++.++.+++. +..-.| ...| ++++.++++++.+. ++-+|-+. ..
T Consensus 85 ~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs--~~-- 160 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSAT--KD-- 160 (310)
T ss_dssp HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEC--TT--
T ss_pred HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECC--CC--
Confidence 778888888654 23433222256777788888776 544444 2222 77888999988653 23333322 11
Q ss_pred ChhhhHHHHHHHhCCeEEEccc
Q 020082 176 RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 176 ~~~~~~~~~~~~~gi~via~~~ 197 (331)
...++++.|++.|+.++.+.+
T Consensus 161 -~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 161 -NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp -THHHHHHHHHHHTCEEEEECS
T ss_pred -ccHHHHHHHHHhCCCEEEECh
Confidence 235899999999999999886
No 74
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=52.13 E-value=1.3e+02 Score=26.73 Aligned_cols=103 Identities=10% Similarity=0.045 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEE-ecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+..+ .++.++..|-+. +-++.+.+++++-.|--. |=+.++.+.++++++.+ .++++
T Consensus 196 ~~~~~a~~~~~~-l~~~~---~~i~~iEqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v 265 (366)
T 1tkk_A 196 WRPKEAVTAIRK-MEDAG---LGIELVEQPVHK-----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTR-SADLI 265 (366)
T ss_dssp SCHHHHHHHHHH-HHHTT---CCEEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT-CCSEE
T ss_pred CCHHHHHHHHHH-HhhcC---CCceEEECCCCc-----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhC-CCCEE
Confidence 466665555554 66621 345566666432 235667777766555433 44457889999998765 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 200 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~ 200 (331)
|+..+..-. .....+...|+++|+.++..+.+..
T Consensus 266 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 266 NIKLMKAGGISGAEKINAMAEACGVECMVGSMIET 300 (366)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCC
T ss_pred EeehhhhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 877654311 1235789999999999998876533
No 75
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=51.99 E-value=52 Score=29.51 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=59.1
Q ss_pred cccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHH
Q 020082 108 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 185 (331)
Q Consensus 108 ~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~ 185 (331)
-+++.++-.|-+.. -++.+.+++++-.| -..|=|.++.+.++++++.+ .++++|+..+. -- .....+...|
T Consensus 214 ~~~i~~iEeP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~~-GGit~~~~i~~~A 286 (365)
T 3ik4_A 214 SIPMVLFEQPLPRE-----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREG-TASVINIKLMK-AGVAEGLKMIAIA 286 (365)
T ss_dssp TCCEEEEECCSCTT-----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHT-CCSEEEECHHH-HCHHHHHHHHHHH
T ss_pred CCCceEEECCCCcc-----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhC-CCCEEEEcCCc-cCHHHHHHHHHHH
Confidence 35788888775432 24556666665444 35566678889998888755 57778877654 11 1224789999
Q ss_pred HHhCCeEEEccccccc
Q 020082 186 QLTGVKLITYGTVMGG 201 (331)
Q Consensus 186 ~~~gi~via~~~l~~G 201 (331)
+++|+.++..+.+.++
T Consensus 287 ~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 287 QAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999998876554
No 76
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=51.22 E-value=67 Score=29.09 Aligned_cols=99 Identities=9% Similarity=-0.076 Sum_probs=63.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCcccHHHHHHHHHcCCCeee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~ 165 (331)
.++.+...+-++. |+.++.++| ..|-+. +-++.+.+++++-.|--.+ =+.++++.++++++.+ .+++
T Consensus 230 ~~~~~~ai~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~ 297 (398)
T 2pp0_A 230 QWDRETAIRMGRK-MEQFNLIWI-----EEPLDA-----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGN-ASDF 297 (398)
T ss_dssp CSCHHHHHHHHHH-HGGGTCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCCHHHHHHHHHH-HHHcCCcee-----eCCCCh-----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCE
Confidence 3566766665554 777776643 444321 2356677777765564443 3446889999998865 5788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+|+..+-.-- .....+...|+++|+.++..+.
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeecCc
Confidence 8887654311 1225789999999999986654
No 77
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=50.65 E-value=1.2e+02 Score=26.07 Aligned_cols=102 Identities=14% Similarity=0.038 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEe-cCCC----CCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCC
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDY----SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP 162 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH-~~d~----~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~ 162 (331)
++.+.+.+..++ +-.-|-|.||+---- .|.. ....++.+...++.+++++. -|-|-++.++.++++++.|.+
T Consensus 26 ~~~~~a~~~a~~-~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 26 LDLDDAVKHGLA-MAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQ 102 (280)
T ss_dssp CSHHHHHHHHHH-HHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCC
Confidence 356666665533 455699999997422 2321 11125567888888887743 477889999999999998743
Q ss_pred eeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 163 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 163 ~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
+ +| ..|.... +.++++.+++.|+.++.+..
T Consensus 103 i-IN--dvsg~~~--d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 103 M-VN--DVSGGRA--DPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp E-EE--ETTTTSS--CTTHHHHHHHHTCCEEEECC
T ss_pred E-EE--ECCCCCC--CHHHHHHHHHhCCeEEEEcC
Confidence 3 22 2232222 34799999999999999864
No 78
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=50.38 E-value=52 Score=29.83 Aligned_cols=88 Identities=8% Similarity=0.043 Sum_probs=59.8
Q ss_pred CcccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHH
Q 020082 107 PCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAEL 184 (331)
Q Consensus 107 d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~ 184 (331)
+-+++.++-.|-+... ++.+.+|.++-.| -..|=|.++...+.++++.+ .++++|+..+. -- .....+...
T Consensus 214 ~~~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~-a~d~v~~k~~~-GGit~~~~i~~~ 286 (389)
T 3s5s_A 214 LGADVALLEQPVPRDD-----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAER-AATVVNIKLMK-GGIAEALDIAAV 286 (389)
T ss_dssp TTCEEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTT-CCSEEEECHHH-HHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC-CCCEEEecCCC-CCHHHHHHHHHH
Confidence 3467888888754332 4456666655444 46677778899999988755 57778877654 11 112468899
Q ss_pred HHHhCCeEEEccccccc
Q 020082 185 CQLTGVKLITYGTVMGG 201 (331)
Q Consensus 185 ~~~~gi~via~~~l~~G 201 (331)
|+++|+.++..+.+.++
T Consensus 287 A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 287 ARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHTTCEEEECCSSCCH
T ss_pred HHHcCCeEEecCCcccH
Confidence 99999999998876554
No 79
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=50.25 E-value=1.3e+02 Score=26.38 Aligned_cols=105 Identities=9% Similarity=0.013 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCcccHHHHHHHHHcCCCeee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~ 165 (331)
.++.+...+-++. |+.++.+ ..++..|-+. +-++.+.+++++-.|--.+ =+.++++.++++++.+ .+++
T Consensus 192 ~~~~~~a~~~~~~-l~~~~i~---~~~iE~P~~~-----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~-~~d~ 261 (345)
T 2zad_A 192 GYTQKEAVEFARA-VYQKGID---IAVYEQPVRR-----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEE-AVDY 261 (345)
T ss_dssp CSCHHHHHHHHHH-HHHTTCC---CSEEECCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHT-CCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCC---eeeeeCCCCc-----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhC-CCCE
Confidence 3566766655544 7777655 1145555432 2356677777665554443 3456889999998765 5777
Q ss_pred ecccccccccChhhhHHHHHHHhCCeEEEccccccc
Q 020082 166 NQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 166 vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
+|+..+----.....+...|+++|+.++..+.+..+
T Consensus 262 v~ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 262 VNIKLMKSGISDALAIVEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTTCEEEECCSSCCH
T ss_pred EEEecccccHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 887554300111247889999999999988765443
No 80
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=49.54 E-value=72 Score=28.73 Aligned_cols=102 Identities=8% Similarity=0.034 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+- -+.|+.++.++ |..|-+.. -++.+.+++++-.|- ..|=+.++.++++++++.+ .++++
T Consensus 205 ~~~~~A~~~-~~~l~~~~i~~-----iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 272 (383)
T 3i4k_A 205 WDRRTALHY-LPILAEAGVEL-----FEQPTPAD-----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQ-AADVI 272 (383)
T ss_dssp SCHHHHHHH-HHHHHHTTCCE-----EESCSCTT-----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHT-CCSEE
T ss_pred CCHHHHHHH-HHHHHhcCCCE-----EECCCChh-----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcC-CCCEE
Confidence 455544332 24466666443 34443221 245556666553443 3444567888888888765 57788
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+..-- .....+...|+++|+.++..+.+.++
T Consensus 273 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 273 ALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp EECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred EEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCccH
Confidence 887664311 12357888999999999887765544
No 81
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=49.15 E-value=1.5e+02 Score=26.59 Aligned_cols=83 Identities=10% Similarity=0.110 Sum_probs=56.1
Q ss_pred cEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeecccccccc-cChhhhHHHHHHH
Q 020082 110 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQL 187 (331)
Q Consensus 110 Dl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~-~~~~~~~~~~~~~ 187 (331)
++ ++..|-+ .++.+.+++++-.|- ..|=+.++++.++++++.+ .++++|+..+-.- -.....+...|++
T Consensus 216 ~i-~iEqP~~-------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~ik~~~~GGit~~~~ia~~A~~ 286 (378)
T 3eez_A 216 HV-MFEQPGE-------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDG-LAEVFGIKLNRVGGLTRAARMRDIALT 286 (378)
T ss_dssp TC-CEECCSS-------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHHHHHHHHHHHH
T ss_pred Ce-EEecCCC-------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC-CCCEEEeCchhcCCHHHHHHHHHHHHH
Confidence 45 5666543 245677777766554 3444567899999999865 5788888765431 1123578999999
Q ss_pred hCCeEEEccccccc
Q 020082 188 TGVKLITYGTVMGG 201 (331)
Q Consensus 188 ~gi~via~~~l~~G 201 (331)
+|+.++..+.+.++
T Consensus 287 ~g~~~~~~~~~es~ 300 (378)
T 3eez_A 287 HGIDMFVMATGGSV 300 (378)
T ss_dssp TTCEEEEECSSCSH
T ss_pred cCCEEEcCCCCCCH
Confidence 99999987766544
No 82
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=48.64 E-value=49 Score=29.65 Aligned_cols=72 Identities=7% Similarity=0.032 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeecccccccccC-hhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR-PQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~~-~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-. -- ....+...|+++|+.++..+.+.++
T Consensus 225 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 225 VLSRRRLVGQLDMPFIADESVPTPADVTREVLGG-SATAISIKTART-GFTGSTRVHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHT-SCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEECCcCCcH
Confidence 55667777765554 4455567899999988765 577888876544 22 2257899999999999987655444
No 83
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=48.37 E-value=50 Score=30.05 Aligned_cols=99 Identities=8% Similarity=0.023 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.++.+ ++..|-+. +-++.+.+++++-.|--.+- +.++.+.++++++.+ .++++
T Consensus 221 ~~~~~a~~~~~~-l~~~~i~-----~iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 288 (410)
T 2qq6_A 221 FDIPSSIRFARA-MEPFGLL-----WLEEPTPP-----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKR-AVDYV 288 (410)
T ss_dssp CCHHHHHHHHHH-HGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HhhcCCC-----eEECCCCh-----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEE
Confidence 466666555544 7766654 44555322 23667777777655644443 346889999998865 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
|+..+-.-- .....+...|+++|+.++..+..
T Consensus 289 ~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 289 MPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp CCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 887654211 12257889999999999987663
No 84
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=47.92 E-value=1.3e+02 Score=25.57 Aligned_cols=100 Identities=14% Similarity=0.027 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc--CCCeeee
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 166 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~--~~~~~~v 166 (331)
+.+.+.+..++.+ .-|-|.||+-. ....... .++.-..+..+++. .=--|-|-++.++.++++++. |.+ -+|
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~~~v~~-~ee~~rvv~~i~~~-~~~pisIDT~~~~v~~aAl~a~~Ga~-iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GPAVQDK-VSAMEWLVEVTQEV-SNLTLCLDSTNIKAIEAGLKKCKNRA-MIN 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C----CH-HHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHHHCSSCE-EEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CCCCCCh-HHHHHHHHHHHHHh-CCCeEEEeCCCHHHHHHHHhhCCCCC-EEE
Confidence 4555655555444 57999999965 1111122 23333333333332 112467778999999999986 632 222
Q ss_pred cccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 167 QVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 167 q~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
..|.. ..+.+++++.+++.|++++.+..
T Consensus 97 --dvs~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 97 --STNAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp --EECSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred --ECCCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 22222 12223799999999999999874
No 85
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=47.54 E-value=35 Score=31.20 Aligned_cols=88 Identities=8% Similarity=0.021 Sum_probs=56.0
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHH
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQL 187 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~ 187 (331)
.++.++-.|-+.. -++.+.+|+++-.| -..|=|.++.+.+.++++.+ .++++|....----.....+...|+.
T Consensus 258 ~~l~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~div~~d~~~GGit~~~kia~~A~~ 331 (412)
T 4h1z_A 258 HGLWFAEAPVRTE-----DIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARR-ALAIVQPEMGHKGITQFMRIGAYAHV 331 (412)
T ss_dssp GCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTT-CCSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred cccceecCCCCcc-----chHHHHHHHhhcCCccccCCcccchHhHHHHHHcC-CCCEEEecCCCCChHHHHHHHHHHHH
Confidence 4555665553322 24556677766554 34566678888888888755 47777776431000112467889999
Q ss_pred hCCeEEEcccccccc
Q 020082 188 TGVKLITYGTVMGGL 202 (331)
Q Consensus 188 ~gi~via~~~l~~G~ 202 (331)
+|+.++..+++..|+
T Consensus 332 ~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 332 HHIKVIPHATIGAGI 346 (412)
T ss_dssp TTCEECCCCCSSCSH
T ss_pred CCCcEEecCCcchHH
Confidence 999999988776654
No 86
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=47.23 E-value=48 Score=29.70 Aligned_cols=100 Identities=12% Similarity=0.019 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+. .+-++. |+.++.++ +..|-+. +-++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++
T Consensus 200 ~~~~~-~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v 266 (375)
T 1r0m_A 200 YTLAD-AGRLRQ-LDEYDLTY-----IEQPLAW-----DDLVDHAELARRIRTPLCLDESVASASDARKALALG-AGGVI 266 (375)
T ss_dssp CCGGG-HHHHHT-TGGGCCSC-----EECCSCT-----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHT-SCSEE
T ss_pred CCHHH-HHHHHH-HHhCCCcE-----EECCCCc-----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhC-CCCEE
Confidence 45555 333333 55555444 4455322 2355566676654443 3344457889999998765 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 200 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~ 200 (331)
|+..+-.-- .....+...|+++|+.++.-+-+.+
T Consensus 267 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (375)
T 1r0m_A 267 NLKVARVGGHAESRRVHDVAQSFGAPVWCGGMLES 301 (375)
T ss_dssp EECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred EECcchhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 887665311 1235789999999999665554433
No 87
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=47.14 E-value=1.5e+02 Score=26.22 Aligned_cols=102 Identities=10% Similarity=-0.026 Sum_probs=66.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++ .|+.++.++ +..|-+. +-++.+.+++++-.|--.+ =+.++.+.++++++.+ .++++
T Consensus 199 ~~~~~a~~~~~-~l~~~~i~~-----iEqP~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v 266 (370)
T 1nu5_A 199 WDEQTASIWIP-RLEEAGVEL-----VEQPVPR-----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDH-AVDAF 266 (370)
T ss_dssp CCHHHHHHHHH-HHHHHTCCE-----EECCSCT-----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHH-HHHhcCcce-----EeCCCCc-----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC-CCCEE
Confidence 46666655544 577777654 4455321 2356677777765554333 3457889999998865 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+..-- .....+...|+++|+.++..+.+.++
T Consensus 267 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 267 SLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred EEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 887654311 12357899999999999988765444
No 88
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=46.91 E-value=1.8e+02 Score=26.84 Aligned_cols=97 Identities=9% Similarity=0.021 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCc--ccHHHHHHHHHcCCCeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~--~~~~~l~~~~~~~~~~~~ 165 (331)
.+++.+.+.+.+.++.+ ++++|-.|-+.. -|+.+.+|.++.+|--+|=-. .+++.++++++.+ -.++
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~d-----D~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~-a~d~ 338 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQD-----DWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEK-ACNC 338 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT-----CHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCcc-----cHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhC-CCCE
Confidence 36666666666666654 588888875433 367778888888876666443 4899999999865 4777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
+|+..|-.-- ....++...|+++|+.++..
T Consensus 339 i~iKv~qiGGitea~~ia~lA~~~g~~~~~s 369 (439)
T 2akz_A 339 LLLKVNQIGSVTEAIQACKLAQENGWGVMVS 369 (439)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHCCCeEEee
Confidence 8877664311 12357899999999987653
No 89
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=46.71 E-value=53 Score=29.85 Aligned_cols=98 Identities=6% Similarity=0.041 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.+ ++.++..|-+. +-++.+.+++++-.|--.+- +.++++.++++++.+ .++++
T Consensus 229 ~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 296 (410)
T 2gl5_A 229 LGTNSAIQFAKA-IEKY-----RIFLYEEPIHP-----LNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQ-SIAVA 296 (410)
T ss_dssp SCHHHHHHHHHH-HGGG-----CEEEEECSSCS-----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhc-----CCCeEECCCCh-----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCEE
Confidence 466655554443 5554 45566666432 23566777776655644443 346788999998865 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
|+..+-.-- .....+...|+++|+.++..+.
T Consensus 297 ~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 297 QPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp CCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 887665311 1225789999999999998766
No 90
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=46.35 E-value=32 Score=29.64 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCcccEEEEecCCC----CCchHHHHHHHHHHHHH-cCcccEEecC
Q 020082 94 RESIDVSRRRMDVPCLDMLQFHWWDY----SNPGYLDALNHLTDLKE-EGKIKTVALT 146 (331)
Q Consensus 94 ~~~~~~SL~rLg~d~lDl~~lH~~d~----~~~~~~e~~~~l~~l~~-~Gkir~iGvS 146 (331)
++++.+.|+.||++.=|++++|..-. ....-+.++++|.+++. +|.+---..+
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 45677788999999999999997531 12224678999988875 7887655544
No 91
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=45.60 E-value=14 Score=23.61 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHcCcccE
Q 020082 124 YLDALNHLTDLKEEGKIKT 142 (331)
Q Consensus 124 ~~e~~~~l~~l~~~Gkir~ 142 (331)
-+++++.|.+|.++|.|+-
T Consensus 39 kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 39 KQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHCCCeec
Confidence 4789999999999999973
No 92
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=45.54 E-value=44 Score=30.34 Aligned_cols=99 Identities=9% Similarity=0.003 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.+ ++.++..|-+. +-++.+.+++++-.|--.+-- .++++.++++++.+ .++++
T Consensus 220 ~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 287 (403)
T 2ox4_A 220 TDLVSAIQFAKA-IEEF-----NIFFYEEINTP-----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDR-SIDVI 287 (403)
T ss_dssp SCHHHHHHHHHH-HGGG-----CEEEEECCSCT-----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhh-----CCCEEeCCCCh-----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcC-CCCEE
Confidence 466665554443 5554 45566665432 236667777777666544443 45788899998865 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
|+..+-.-- .....+...|+++|+.++..+..
T Consensus 288 ~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 288 QPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp CCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 877664311 12257899999999999987764
No 93
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=45.28 E-value=83 Score=27.94 Aligned_cols=84 Identities=11% Similarity=0.114 Sum_probs=56.9
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 186 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~ 186 (331)
.++.++..|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+
T Consensus 209 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~~~~GGit~~~~i~~~A~ 282 (354)
T 3jva_A 209 YQIELVEQPVKRR-----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKG-TVDVINIKLMKCGGIHEALKINQICE 282 (354)
T ss_dssp SCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEECCCChh-----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcC-CCCEEEECchhcCCHHHHHHHHHHHH
Confidence 5677777664322 255667777665553 3444567889999888755 57778877554311 12357899999
Q ss_pred HhCCeEEEcccc
Q 020082 187 LTGVKLITYGTV 198 (331)
Q Consensus 187 ~~gi~via~~~l 198 (331)
++|+.++..+.+
T Consensus 283 ~~gi~~~~~~~~ 294 (354)
T 3jva_A 283 TAGIECMIGCMA 294 (354)
T ss_dssp HTTCEEEECCCT
T ss_pred HcCCeEEecCCC
Confidence 999999988877
No 94
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=45.08 E-value=64 Score=29.27 Aligned_cols=94 Identities=12% Similarity=0.020 Sum_probs=61.1
Q ss_pred HHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-Chh
Q 020082 101 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQ 178 (331)
Q Consensus 101 L~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~ 178 (331)
+++|..+-+++.++-.|-+.. -++.+.++.++-.| -..|=|.++.+.++++++.+ .++++|+..+. -- ...
T Consensus 237 ~~~L~~~~~~i~~iEeP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~i~~k~~~-GGit~~ 309 (393)
T 3u9i_A 237 LDMLGVHGIVPALFEQPVAKD-----DEEGLRRLTATRRVPVAADESVASATDAARLARNA-AVDVLNIKLMK-CGIVEA 309 (393)
T ss_dssp HHTTTTTTCCCSEEECCSCTT-----CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECHHH-HCHHHH
T ss_pred HHHHhhCCCCeEEEECCCCCC-----cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcC-CCCEEEecccc-cCHHHH
Confidence 344432345677777664322 23456666665444 46667778899999888755 57788877654 11 122
Q ss_pred hhHHHHHHHhCCeEEEccccccc
Q 020082 179 QKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~~~l~~G 201 (331)
..+...|+++|+.++..+.+.++
T Consensus 310 ~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 310 LDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHcCCeEEecCCcccH
Confidence 57889999999999988876554
No 95
>1y14_A B32, RPB4, DNA-directed RNA polymerase II 32 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: a.60.8.2
Probab=44.76 E-value=80 Score=25.47 Aligned_cols=59 Identities=10% Similarity=0.117 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCC
Q 020082 246 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 316 (331)
Q Consensus 246 ~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~ 316 (331)
+..+.+....++++..++|. +.+ ..+.+ +++++..+.....+++++++..|-......+
T Consensus 126 a~elre~L~~~kL~efE~aq--LaN--------L~PeT--adEaraLIpSle~rlsdEeLeeILd~L~k~r 184 (187)
T 1y14_A 126 VGAVIQLLKSTGLHPFEVAQ--LGS--------LACDT--ADEAKTLIPSLNNKISDDELERILKELSNLE 184 (187)
T ss_dssp HHHHHHHHHTTTCCHHHHHH--HHH--------SCCSS--HHHHHHHSGGGTTTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCHHHHHH--cCc--------CCCCC--HHHHHHHHHhhccCCCHHHHHHHHHHHHHhh
Confidence 34455555558888877664 222 33446 9999999999988999999999988887654
No 96
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=44.76 E-value=43 Score=30.08 Aligned_cols=73 Identities=8% Similarity=0.045 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.+++++-.|- ..|=+.++.++++++++.+ .++++|+..+..-- .....+...|+++|+.++..+.+.++
T Consensus 224 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 224 YTALPKIRQACRIPIMADESCCNSFDAERLIQIQ-ACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp GGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC-CCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 55667777665553 4444567889999988855 57888887665311 12357899999999999987766444
No 97
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=43.69 E-value=2e+02 Score=26.56 Aligned_cols=98 Identities=11% Similarity=0.066 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe--cCcccHHHHHHHHHcCCCeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA--LTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG--vS~~~~~~l~~~~~~~~~~~~ 165 (331)
.+++.+.+-..+.++.. ++++|-.|-...+ -+.|..|.+-. |+|--+| ....+++.++++++.+ .+++
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD--~eg~a~Lt~~l--g~i~IvGDEl~vTn~~~i~~~Ie~~-a~n~ 348 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD--WAAWNKFTVEH--GNFQIVGDDLLVTNPARVQMAMDKN-ACNS 348 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC--HHHHHHHHHHT--TTSEEEESTTTTTCHHHHHHHHHHT-CCSE
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH--HHHHHHHHHhc--CCceEEeccccccCHHHHHHHHHcC-CCCE
Confidence 46777777777777754 4888888755433 23444444432 2566667 3345799999998755 4777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
+|+..|-+-- ....++...|+.+|+++|.-
T Consensus 349 IlIKvnqiGGITEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 349 VLIKVNQIGTLTETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp EEECGGGTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 7777764321 12347889999999997753
No 98
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=43.10 E-value=1.9e+02 Score=26.12 Aligned_cols=101 Identities=13% Similarity=-0.020 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+. .+ +-+.|+.++.++| ..|-+. +-++.+.+++++-.|- ..|=|.++.+.++++++.+ .++++
T Consensus 216 w~~~~-~~-~~~~l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v 282 (400)
T 3mwc_A 216 FELDQ-WE-TFKAMDAAKCLFH-----EQPLHY-----EALLDLKELGERIETPICLDESLISSRVAEFVAKLG-ISNIW 282 (400)
T ss_dssp CCGGG-HH-HHHHHGGGCCSCE-----ESCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHH-HH-HHHHHHhcCCCEE-----eCCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcC-CCCEE
Confidence 35555 33 3356777765544 454322 1356677777764553 4555668899999999865 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+..-- .....+...|+++|+.++..+.+..+
T Consensus 283 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 318 (400)
T 3mwc_A 283 NIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESG 318 (400)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred EEcchhhCCHHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 887654311 12357899999999999887655443
No 99
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=42.94 E-value=40 Score=30.64 Aligned_cols=95 Identities=11% Similarity=0.107 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHH-cCcccEEec-CcccHHHHHHHHHcCCCeeee
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKE-EGKIKTVAL-TNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~-~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~v 166 (331)
+.+...+-++. |+.++.++ +..|-+. +-++.+.++++ .-.|--++- +.++++.++++++.+ .++++
T Consensus 207 ~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v 274 (401)
T 2hzg_A 207 DVEAAAARLPT-LDAAGVLW-----LEEPFDA-----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYG-RIGFI 274 (401)
T ss_dssp CHHHHHTTHHH-HHHTTCSE-----EECCSCT-----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHS-CCSEE
T ss_pred CHHHHHHHHHH-HHhcCCCE-----EECCCCc-----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCC-CCCEE
Confidence 66665555544 77777654 4444321 24677778887 655644443 346788999998765 57888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
|+..+..-- .....+...|+++|+.++..
T Consensus 275 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 275 QIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred EeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 887664311 12257899999999999877
No 100
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=42.86 E-value=50 Score=28.39 Aligned_cols=154 Identities=10% Similarity=0.067 Sum_probs=77.1
Q ss_pred ceeeeccccCCCCCC--chh-hHHHHHHHHHH--HhhhcCCccEEECCC--CchHHHHHHHHhhhhcCCCccchheeeec
Q 020082 6 RDVADEWRVGPYRPG--RRR-RCHASLRRCRS--HHLRHGRSLSFDFVD--GPAEDLYGIFINRVRRERPPEFLDKVRGL 78 (331)
Q Consensus 6 ~l~lGt~~~g~~~~~--~~~-~~~~~l~~al~--~~~~~GGin~~DTA~--g~sE~~lG~~l~~~~~~~~~~~~~~~~~~ 78 (331)
.||.+.|++..|... +.. ...+.|+.+-+ . + ..--+|++- -.+++.+-+|..+.|. .++-.+|..
T Consensus 15 ~iG~sgW~~~~W~G~fYP~~~~~~~~L~~Ya~~~~-F---~tVEiNsTFY~~p~~~t~~~W~~~tP~----~F~F~vKa~ 86 (273)
T 1vpq_A 15 YVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLG-F---RIVELNFTYYTQPSWRSFVQMLRKTPP----DFYFTVKTP 86 (273)
T ss_dssp EEEEBCSCCSTTBTTTBCTTCCGGGHHHHHHHTSC-C---CEEEECCCSSSSSCHHHHHHHHTTSCT----TCEEEEECC
T ss_pred EEECCCCCCCCcCcccCCCCCCchHHHHHHhCCCC-C---CeEEECccccCCCCHHHHHHHHHhCCC----CeEEEEEeC
Confidence 466666776444321 111 12245555533 2 0 122234443 5688999999988765 455566654
Q ss_pred ccccCCCC---CCCHHHHHHHHHHHHHHc--CCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHH
Q 020082 79 TKWVPPPV---KMTSSIVRESIDVSRRRM--DVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERL 153 (331)
Q Consensus 79 ~k~~~~~~---~~~~~~i~~~~~~SL~rL--g~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l 153 (331)
........ ....+.+.+-+ ++++-| | +.+..+++--|..-..+ .+.++.|+.+.+.
T Consensus 87 r~iTh~~~~~~~~~~~~~~~F~-~~~~pL~~~-~kLG~vL~Q~Ppsf~~~-~~~~~~L~~l~~~---------------- 147 (273)
T 1vpq_A 87 GSVTHVLWKEGKDPKEDMENFT-RQIEPLIEE-QRLKMTLAQFPFSFKFS-RKNVEYLEKLRES---------------- 147 (273)
T ss_dssp HHHHHTHHHHTCCSHHHHHHHH-HHHHHHHHT-TCEEEEEEECCTTCCCC-HHHHHHHHHHHHH----------------
T ss_pred hhhcccccccccchHHHHHHHH-HHHHhhccC-CCEEEEEEEcCCCCCCC-HHHHHHHHHHHHH----------------
Confidence 32221100 00123333333 467777 5 67888888777544432 3444445555333
Q ss_pred HHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEc
Q 020082 154 RIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 154 ~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~ 195 (331)
+ +. ..++.++--=+ ...++++.++++|+..+..
T Consensus 148 --l---~~-~~AvE~Rh~sW---~~~~~~~lL~~~~v~~V~~ 180 (273)
T 1vpq_A 148 --Y---PY-ELAVEFRHYSW---DREETYEFLRNHGITFVVV 180 (273)
T ss_dssp --C---CS-CEEEECCBGGG---CSHHHHHHHHHHTCEEEEE
T ss_pred --c---CC-CEEEEccCchh---ccHHHHHHHHHcCcEEEEe
Confidence 0 22 22333332111 1237888888888877643
No 101
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=42.65 E-value=52 Score=29.37 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+. .+-++ .|+.++.++ +..|-+. +-++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++
T Consensus 193 ~~~~~-~~~~~-~l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v 259 (369)
T 2zc8_A 193 YSLAN-LAQLK-RLDELRLDY-----IEQPLAY-----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELG-AGRVF 259 (369)
T ss_dssp CCGGG-HHHHH-GGGGGCCSC-----EECCSCT-----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHT-CCSEE
T ss_pred CCHHH-HHHHH-HHHhCCCcE-----EECCCCc-----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhC-CCCEE
Confidence 35555 33333 356555444 4455322 1245566666654554 3344457889999998765 57788
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 200 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~ 200 (331)
|+..+-.-- .....+...|+++|+.++.-+-+..
T Consensus 260 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 294 (369)
T 2zc8_A 260 NVKPARLGGHGESLRVHALAESAGIPLWMGGMLEA 294 (369)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred EEchhhhCCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 876554311 1225789999999999665554433
No 102
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=42.63 E-value=1.8e+02 Score=26.02 Aligned_cols=100 Identities=11% Similarity=0.169 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeec
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
.+.+...+++.+ |.+.|.|.+++ ..+ .++..+++..++++=.|=-++=-.|++..+.++++.|. +.
T Consensus 43 ~D~~atv~Qi~~-l~~aG~diVRv--------avp-~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~--dk-- 108 (366)
T 3noy_A 43 HDVEATLNQIKR-LYEAGCEIVRV--------AVP-HKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGV--HG-- 108 (366)
T ss_dssp TCHHHHHHHHHH-HHHTTCCEEEE--------ECC-SHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTC--SE--
T ss_pred cCHHHHHHHHHH-HHHcCCCEEEe--------CCC-ChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCC--Ce--
Confidence 466777777765 78889888887 233 25667889999888555555555688888888888663 22
Q ss_pred ccccccccC---hhhhHHHHHHHhCCeEEE---ccccccc
Q 020082 168 VQHSVVDMR---PQQKMAELCQLTGVKLIT---YGTVMGG 201 (331)
Q Consensus 168 ~~~nl~~~~---~~~~~~~~~~~~gi~via---~~~l~~G 201 (331)
++.|+-|-. .-+++++.|+++|+.+-. +..|...
T Consensus 109 lRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ 148 (366)
T 3noy_A 109 IRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKD 148 (366)
T ss_dssp EEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHH
T ss_pred EEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHH
Confidence 445554332 225799999999997644 4444443
No 103
>2c35_A Human RPB4, DNA-directed RNA polymerase II 16 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: a.60.8.2
Probab=42.38 E-value=89 Score=24.22 Aligned_cols=61 Identities=7% Similarity=0.073 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHHHHHHHhhcCCC
Q 020082 245 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 317 (331)
Q Consensus 245 ~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~~l~~~~~~~~~ 317 (331)
.+..+.....+++++..++|.--. ..+.+ +++++..+...+.+++++++.+|-++....+.
T Consensus 89 ~~~~l~e~L~~~~L~~~E~a~L~N----------L~P~t--~dEar~lipsl~~r~sdEeLe~ILd~l~k~r~ 149 (152)
T 2c35_A 89 TIASVRSLLLQKKLHKFELACLAN----------LCPET--AEESKALIPSLEGRFEDEELQQILDDIQTKRS 149 (152)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHH----------HCCSS--HHHHHHHCGGGTTTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCCHHHHHHhcc----------CCCCC--HHHHHHHHHhhccCCCHHHHHHHHHHHHHHHh
Confidence 344555666678888887665322 23446 99999999999889999999999988877654
No 104
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=42.21 E-value=2.1e+02 Score=26.32 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCc--ccHHHHHHHHHcCCCeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~--~~~~~l~~~~~~~~~~~~ 165 (331)
.+++...+.+.+.++.+ ++++|-.|-+.. -|+.+.+|.++.+|--+|=-. .+++.++++++.+ -.++
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~d-----D~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~-a~d~ 341 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAED-----DWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKK-AADA 341 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT-----CHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCc-----CHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhC-CCCE
Confidence 35666666666666654 578888775432 366777778777776665444 4789999999865 4777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
+|+..|-.-- .....+...|+.+|+.++..
T Consensus 342 i~ikv~qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 342 LLLKVNQIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 7776664311 12357899999999987653
No 105
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=41.95 E-value=1.2e+02 Score=24.94 Aligned_cols=96 Identities=9% Similarity=0.218 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCCCcccEEEEecC---------CCCCchHHHHHHHHHH-HHHcCcccEEecCcc---cHHHHHHHH--
Q 020082 93 VRESIDVSRRRMDVPCLDMLQFHWW---------DYSNPGYLDALNHLTD-LKEEGKIKTVALTNF---DTERLRIIL-- 157 (331)
Q Consensus 93 i~~~~~~SL~rLg~d~lDl~~lH~~---------d~~~~~~~e~~~~l~~-l~~~Gkir~iGvS~~---~~~~l~~~~-- 157 (331)
+.+.++. ++++|.+.|++...+.+ ..... .+.++.+.+ +.+.|. +-.+++.+ ..+.+++++
T Consensus 24 ~~~~l~~-~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~ 99 (262)
T 3p6l_A 24 LTEALDK-TQELGLKYIEIYPGHKLGGKWGDKVFDFNLD--AQTQKEIKELAASKGI-KIVGTGVYVAEKSSDWEKMFKF 99 (262)
T ss_dssp HHHHHHH-HHHTTCCEEEECTTEECCGGGTTCEESTTCC--HHHHHHHHHHHHHTTC-EEEEEEEECCSSTTHHHHHHHH
T ss_pred HHHHHHH-HHHcCCCEEeecCCcccccccccccccccCC--HHHHHHHHHHHHHcCC-eEEEEeccCCccHHHHHHHHHH
Confidence 5555554 67799999998765421 11111 233444444 445554 44444322 223333333
Q ss_pred --HcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEcccc
Q 020082 158 --ENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 158 --~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l 198 (331)
+.|.+..++... ...-+.+.+.|++.||.+ ++.+.
T Consensus 100 A~~lGa~~v~~~~~-----~~~~~~l~~~a~~~gv~l-~~En~ 136 (262)
T 3p6l_A 100 AKAMDLEFITCEPA-----LSDWDLVEKLSKQYNIKI-SVHNH 136 (262)
T ss_dssp HHHTTCSEEEECCC-----GGGHHHHHHHHHHHTCEE-EEECC
T ss_pred HHHcCCCEEEecCC-----HHHHHHHHHHHHHhCCEE-EEEeC
Confidence 235443333211 111246777777778753 45554
No 106
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=41.78 E-value=1.8e+02 Score=26.20 Aligned_cols=116 Identities=12% Similarity=0.062 Sum_probs=70.5
Q ss_pred cccEEecCcccHHHHHHHHHcCCCeeeecccccccccC-------hhhhHHHHHHHhCCeEEEccccccccccccccCCC
Q 020082 139 KIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR-------PQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTN 211 (331)
Q Consensus 139 kir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~~-------~~~~~~~~~~~~gi~via~~~l~~G~L~g~~~~~~ 211 (331)
.--.+=.|+.+.+.+..+++.+..+.-+...+|..-+. .-...=++.++.|+.+.|+-|=..+ +.|.+..
T Consensus 114 lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~-~rGPl~e-- 190 (372)
T 2p0o_A 114 IDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQ-TRGPIFA-- 190 (372)
T ss_dssp SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSS-CCTTTCS--
T ss_pred CEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCc-cCCCccC--
Confidence 33466778889999999998765555555555643221 1124556678889999999875432 2221110
Q ss_pred CCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHH
Q 020082 212 LSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQD 291 (331)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e 291 (331)
.-|.+... .+++|. +|...+.....|+-|++|=...+.+.+++
T Consensus 191 ----------GLPTLE~H--------------------------R~~~~~-~~a~~L~~~~~iD~V~IGd~~~S~~el~~ 233 (372)
T 2p0o_A 191 ----------GLPTLEKH--------------------------RGQNPF-AAAVGLMADPYVDAVYIGDPTISERTMAQ 233 (372)
T ss_dssp ----------CCCSBGGG--------------------------TTSCHH-HHHHHHHHSTTCCEEEECSSCCCHHHHHH
T ss_pred ----------CCCchHHh--------------------------CCCCHH-HHHHHHHhcCCCCEEEECCCCCCHHHHHH
Confidence 11222111 134554 45666778778999999976655777766
Q ss_pred hhc
Q 020082 292 TNA 294 (331)
Q Consensus 292 ~~~ 294 (331)
...
T Consensus 234 l~~ 236 (372)
T 2p0o_A 234 FGY 236 (372)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 107
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=41.35 E-value=2.1e+02 Score=26.10 Aligned_cols=97 Identities=10% Similarity=0.054 Sum_probs=64.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCc-ccEE-ecCcccHHHHHHHHHcCCCee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTV-ALTNFDTERLRIILENGIPVV 164 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gk-ir~i-GvS~~~~~~l~~~~~~~~~~~ 164 (331)
.++.+...+-++. |+.++.++| ..|-+. +-++.+.+++++-. |--. +=+.++++.++++++.+ .++
T Consensus 239 ~~~~~eai~~~~~-L~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d 306 (428)
T 3bjs_A 239 AYTMADARRVLPV-LAEIQAGWL-----EEPFAC-----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAG-AVQ 306 (428)
T ss_dssp CCCHHHHHHHHHH-HHHTTCSCE-----ECCSCT-----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTC-CEE
T ss_pred CCCHHHHHHHHHH-HHhcCCCEE-----ECCCCc-----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhC-CCC
Confidence 3577776666655 888877654 344321 23666777776644 5433 33446889999998755 589
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 165 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 165 ~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
++|+..+-.-- .....+...|+++|+.++..
T Consensus 307 ~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 307 VWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 99988775321 12357899999999998887
No 108
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=41.30 E-value=68 Score=21.58 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHH
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVN 306 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~ 306 (331)
+.+.+|+..|+.+|.|..+...+.+-..-. -+|.+ .+.+.++-..+.+.--.+++.|+
T Consensus 12 ev~~~L~~rAa~~G~S~~~ylr~~Le~~a~----~~~~~-~~~~~l~r~~~~~~dl~D~~~m~ 69 (73)
T 3h87_C 12 DVLASLDAIAARLGLSRTEYIRRRLAQDAQ----TARVT-VTAADLRRLRGAVAGLGDPELMR 69 (73)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHT----SCCCC-CCHHHHHHHHHHSGGGGCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhc----CCccc-ccHHHHHHHHHHHcccCCHHHHH
Confidence 566899999999999999887777654211 13522 23888877776654445555543
No 109
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=41.26 E-value=45 Score=28.76 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCCCcccEEEEecCC----CCCchHHHHHHHHHHHHH-cCcccEEecC
Q 020082 94 RESIDVSRRRMDVPCLDMLQFHWWD----YSNPGYLDALNHLTDLKE-EGKIKTVALT 146 (331)
Q Consensus 94 ~~~~~~SL~rLg~d~lDl~~lH~~d----~~~~~~~e~~~~l~~l~~-~Gkir~iGvS 146 (331)
++++.+.|+.||+..=|.+++|..- ......+.++++|.+++- +|.+--=.++
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtft 72 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQS 72 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 4567777899999999999999752 212224678999998774 8876554443
No 110
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=41.21 E-value=1.2e+02 Score=26.09 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.5
Q ss_pred hhHHHHHHHhCCeEEEc
Q 020082 179 QKMAELCQLTGVKLITY 195 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~ 195 (331)
+..++.|++.|+..+..
T Consensus 117 ~~~i~~A~~lG~~~v~~ 133 (305)
T 3obe_A 117 KKATDIHAELGVSCMVQ 133 (305)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 46899999999998885
No 111
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=40.35 E-value=1.2e+02 Score=23.09 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=54.9
Q ss_pred ceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCCCchHHHHHHHHhhhhcCCCccchheeeecccccCCC
Q 020082 6 RDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVDGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPP 85 (331)
Q Consensus 6 ~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~ 85 (331)
+|..||.++=. ..++++..+.|+.+|.+|+..| |-|-|.. .++. ..+-..|. |.-
T Consensus 2 ~~t~~tfSyLP--~ltd~qI~kQI~YlL~qGw~~~-iEf~d~~--------------~~r~-------~yW~mWkL-PmF 56 (138)
T 4f0h_B 2 RITQGTFSFLP--DLTDEQIKKQIDYMISKKLAIG-IEYTNDI--------------HPRN-------SFWEMWGL-PLF 56 (138)
T ss_dssp CCCCSTTTTSC--CCCHHHHHHHHHHHHHTTCEEE-EEEESCC--------------CTTC-------CCCEESSC-CBC
T ss_pred cccccccccCC--CCCHHHHHHHHHHHHhCCCEEE-EEeCCCC--------------CCcC-------CEEeecCC-CCc
Confidence 46678876533 4678899999999999999886 6666532 1121 22333222 222
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcccEEEEe
Q 020082 86 VKMTSSIVRESIDVSRRRMDVPCLDMLQFH 115 (331)
Q Consensus 86 ~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH 115 (331)
...+++.+...|++-++.---.||=|+=+.
T Consensus 57 g~~d~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 4f0h_B 57 EVTDPAPVLFEINACRKAKSNFYIKVVGFS 86 (138)
T ss_dssp SCCSHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 234788899999988888766666555443
No 112
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=39.56 E-value=2.1e+02 Score=25.62 Aligned_cols=87 Identities=9% Similarity=0.085 Sum_probs=59.4
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 186 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~ 186 (331)
+++.++-.|-+.. -++.+.+++++-.| -..|=|.++.++++++++.+ .++++|+..+..-- .....+...|+
T Consensus 214 ~~l~~iEeP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGi~~~~~ia~~A~ 287 (379)
T 3r0u_A 214 LNVEIIEQPVKYY-----DIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQ-ACNMINIKLAKTGGILEAQKIKKLAD 287 (379)
T ss_dssp CCEEEEECCSCTT-----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCcc-----cHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC-CCCEEEECccccCCHHHHHHHHHHHH
Confidence 5677787775432 24556667665444 45566778999999998865 47788876554311 12357899999
Q ss_pred HhCCeEEEccccccc
Q 020082 187 LTGVKLITYGTVMGG 201 (331)
Q Consensus 187 ~~gi~via~~~l~~G 201 (331)
++|+.++..+.+.++
T Consensus 288 ~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 288 SAGISCMVGCMMESP 302 (379)
T ss_dssp HTTCEEEECCCSCCH
T ss_pred HcCCEEEEeCCCccH
Confidence 999999988776554
No 113
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=39.54 E-value=86 Score=25.79 Aligned_cols=19 Identities=5% Similarity=-0.073 Sum_probs=15.1
Q ss_pred hhHHHHHHHhCCeEEEccc
Q 020082 179 QKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~~~ 197 (331)
+..++.|++.|+..+...|
T Consensus 88 ~~~i~~a~~lG~~~v~~~~ 106 (260)
T 1k77_A 88 DLALEYALALNCEQVHVMA 106 (260)
T ss_dssp HHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHHHcCCCEEEECc
Confidence 4688999999998886643
No 114
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=39.41 E-value=1.5e+02 Score=26.37 Aligned_cols=86 Identities=8% Similarity=-0.024 Sum_probs=55.1
Q ss_pred cEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHH
Q 020082 110 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQL 187 (331)
Q Consensus 110 Dl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~ 187 (331)
++.++..|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|++
T Consensus 215 ~i~~iEqP~~~~-----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 215 GVELIEQPVGRE-----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDR-SVDVFSLKLCNMGGVSATQKIAAVAEA 288 (370)
T ss_dssp TEEEEECCSCTT-----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTT-SCSEEEECTTTSCSHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcc-----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEECccccCCHHHHHHHHHHHHH
Confidence 345555553321 245566676655453 3444567888888888754 57788877664311 123578999999
Q ss_pred hCCeEEEccccccc
Q 020082 188 TGVKLITYGTVMGG 201 (331)
Q Consensus 188 ~gi~via~~~l~~G 201 (331)
+|+.++..+.+.++
T Consensus 289 ~g~~~~~~~~~es~ 302 (370)
T 1chr_A 289 SGIASYGGTMLDST 302 (370)
T ss_dssp HTCEEEECCSCCTT
T ss_pred cCCeEEecCCCccH
Confidence 99999987766554
No 115
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=39.17 E-value=1.1e+02 Score=25.55 Aligned_cols=19 Identities=0% Similarity=-0.111 Sum_probs=14.8
Q ss_pred hhHHHHHHHhCCeEEEccc
Q 020082 179 QKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~~~ 197 (331)
+..++.|++.|+..+...|
T Consensus 96 ~~~i~~A~~lGa~~v~~~~ 114 (269)
T 3ngf_A 96 DIALHYALALDCRTLHAMS 114 (269)
T ss_dssp HHHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHcCCCEEEEcc
Confidence 3688899999998886543
No 116
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=38.56 E-value=77 Score=28.24 Aligned_cols=73 Identities=10% Similarity=0.042 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.|.+|+++-.|- ..|=|.++.+.+.++++.+ .++++|+.....-- .....+...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARDR-SVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTT-CCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcC-CCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 45677777766653 4555667888888888754 47777776543211 11257889999999999887766554
No 117
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=38.51 E-value=1.3e+02 Score=27.41 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHH-HHHHcC-cccEEecCcccHHHHHHHHHcCCCeeeecccccc
Q 020082 95 ESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLT-DLKEEG-KIKTVALTNFDTERLRIILENGIPVVSNQVQHSV 172 (331)
Q Consensus 95 ~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~-~l~~~G-kir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl 172 (331)
.++...+..+ +..=|-+.+..+.+ ..+...+. .+...| ++..+- ..+.+.+++++....+..++..+.|+
T Consensus 108 ~Ai~~al~al-~~~Gd~Vi~~~~~y-----~~~~~~~~~~~~~~G~~~~~v~--~~d~~~l~~ai~~~t~~v~~e~p~Np 179 (430)
T 3ri6_A 108 AAISTAILTL-ARAGDSVVTTDRLF-----GHTLSLFQKTLPSFGIEVRFVD--VMDSLAVEHACDETTKLLFLETISNP 179 (430)
T ss_dssp HHHHHHHHHH-CCTTCEEEEETTCC-----HHHHHHHHTHHHHTTCEEEEEC--TTCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred HHHHHHHHHH-hCCCCEEEEcCCCc-----hhHHHHHHHHHHHcCCEEEEeC--CCCHHHHHHhhCCCCeEEEEECCCCC
Confidence 3444444444 23346666665543 23344333 223333 334443 33777887776544455566666676
Q ss_pred ccc-ChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 173 VDM-RPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 173 ~~~-~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
.-. .+-+.+.+.|+++|+.++.=.+++.|.+
T Consensus 180 tG~~~dl~~i~~la~~~g~~livD~a~~~~~~ 211 (430)
T 3ri6_A 180 QLQVADLEALSKVVHAKGIPLVVDTTMTPPYL 211 (430)
T ss_dssp TCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT
T ss_pred CCeecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 432 2235799999999999998888876655
No 118
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=38.20 E-value=1.2e+02 Score=24.74 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=53.8
Q ss_pred EEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHH--cCCCeeeeccccccc---ccChhhhHHHHH
Q 020082 111 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE--NGIPVVSNQVQHSVV---DMRPQQKMAELC 185 (331)
Q Consensus 111 l~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~--~~~~~~~vq~~~nl~---~~~~~~~~~~~~ 185 (331)
++|+..|.... .+++++...+-.++.-|++|=|.+.+.+...++.+ .++.+.+|--.+..- ..+...+..+..
T Consensus 17 ~~YF~~~G~eN--T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L 94 (201)
T 1vp8_A 17 IVYFNKPGREN--TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL 94 (201)
T ss_dssp CEEESSCSGGG--HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 34444554332 45666655555555559999988876666555554 244555444444432 122346899999
Q ss_pred HHhCCeEEEccccccc
Q 020082 186 QLTGVKLITYGTVMGG 201 (331)
Q Consensus 186 ~~~gi~via~~~l~~G 201 (331)
++.|+.++...=+..|
T Consensus 95 ~~~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 95 RKRGAKIVRQSHILSG 110 (201)
T ss_dssp HHTTCEEEECCCTTTT
T ss_pred HhCCCEEEEEeccccc
Confidence 9999999877655444
No 119
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=38.15 E-value=42 Score=29.17 Aligned_cols=54 Identities=17% Similarity=0.115 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCCCcccEEEEecCCCCC----chHHHHHHHHHHHH-HcCcccEEecC
Q 020082 93 VRESIDVSRRRMDVPCLDMLQFHWWDYSN----PGYLDALNHLTDLK-EEGKIKTVALT 146 (331)
Q Consensus 93 i~~~~~~SL~rLg~d~lDl~~lH~~d~~~----~~~~e~~~~l~~l~-~~Gkir~iGvS 146 (331)
-++++.+.|+.||+..=|.+++|..-... ...+.++++|.+++ .+|.+---.+|
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 35677788999999999999999763321 12467999998888 58888766644
No 120
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=37.82 E-value=91 Score=28.09 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.+++++-.|- ..|=+.++.+.+.++++.+ .++++|+..+-.-- .....+...|+++|+.++..+.+.+|
T Consensus 232 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 232 FELMARLRGLTDVPLLADESVYGPEDMVRAAHEG-ICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCCCCccH
Confidence 56677777765553 4455667888998888765 47778876554211 12247899999999999876655444
No 121
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=37.48 E-value=52 Score=28.24 Aligned_cols=55 Identities=7% Similarity=-0.036 Sum_probs=32.8
Q ss_pred EEecCccc---------HHHHHHHHHcCCCeeeeccccc-cccc--ChhhhHHHHHHHhCCeEEEcccc
Q 020082 142 TVALTNFD---------TERLRIILENGIPVVSNQVQHS-VVDM--RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 142 ~iGvS~~~---------~~~l~~~~~~~~~~~~vq~~~n-l~~~--~~~~~~~~~~~~~gi~via~~~l 198 (331)
.+|++.+. .+.++.+.+.| ++.+++... +... .....+.+.+++.|+.+.+..++
T Consensus 22 klg~~~~~~~~~~~~~~l~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~ 88 (309)
T 2hk0_A 22 KHGIYYSYWEHEWSAKFGPYIEKVAKLG--FDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGP 88 (309)
T ss_dssp EEEEEGGGGCSCTTSCSHHHHHHHHHTT--CSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eeEEehhhcccccccccHHHHHHHHHhC--CCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCC
Confidence 37877643 22355555544 666666532 1111 12357889999999999986554
No 122
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=37.45 E-value=1.7e+02 Score=25.21 Aligned_cols=100 Identities=8% Similarity=0.004 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEe-cCCCC-Cc---hHHHHHHHHHHHHHc-CcccEEecCcccHHHHHHHHHcCCC
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYS-NP---GYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIP 162 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH-~~d~~-~~---~~~e~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~~~~ 162 (331)
+.+.+.+..++ +-.-|-|.||+---- +|... .. ..+.+...++.++++ +. -|-+-++.++.++++++.|.+
T Consensus 36 ~~~~a~~~a~~-~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 36 SLIDAVKHANL-MINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHH-HHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCC
Confidence 45555554433 444589999996532 24321 11 123356666777665 43 477789999999999998743
Q ss_pred eeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 163 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 163 ~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
+ +|- .|.. ...++++.+++.|+.++.+..
T Consensus 113 i-INd--vsg~---~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 113 I-IND--IRSL---SEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp E-EEE--TTTT---CSTTHHHHHHHHTCCEEEECC
T ss_pred E-EEE--CCCC---CCHHHHHHHHHhCCeEEEEcc
Confidence 3 222 2222 234789999999999999864
No 123
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=37.40 E-value=16 Score=23.68 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHH
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRY 267 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~ 267 (331)
..-+.++.+-.+.|+|..++|-+-
T Consensus 13 ~~~~~l~~~r~~~g~s~~~lA~~~ 36 (74)
T 1y7y_A 13 KFGQRLRELRTAKGLSQETLAFLS 36 (74)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 344678888888899888877654
No 124
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=37.33 E-value=88 Score=28.24 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=57.9
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 186 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~ 186 (331)
.++.++-.|-+.. -++.+.++.++-.|- ..|=|.++.+.++++++.+ .++++|+..+..-- .....+...|+
T Consensus 227 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~~~GGit~~~~ia~~A~ 300 (393)
T 1wuf_A 227 YDLEMIEQPFGTK-----DFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIG-SCRAINLKLARVGGMSSALKIAEYCA 300 (393)
T ss_dssp GTCSEEECCSCSS-----CSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHT-CCSEEEECTGGGTSHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCc-----CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhC-CCCEEEeChhhhCCHHHHHHHHHHHH
Confidence 5666777775332 244566677665543 4455567889999988765 47888887765311 12257889999
Q ss_pred HhCCeEEEccccccc
Q 020082 187 LTGVKLITYGTVMGG 201 (331)
Q Consensus 187 ~~gi~via~~~l~~G 201 (331)
++|+.++..+.+..|
T Consensus 301 ~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 301 LNEILVWCGGMLEAG 315 (393)
T ss_dssp HTTCEEEECCCCCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999887766544
No 125
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=36.45 E-value=1.4e+02 Score=22.75 Aligned_cols=85 Identities=13% Similarity=0.058 Sum_probs=54.0
Q ss_pred ceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCCCchHHHHHHHHhhhhcCCCccchheeeecccccCCC
Q 020082 6 RDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVDGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPP 85 (331)
Q Consensus 6 ~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~ 85 (331)
+|.+||.++=. ..++++..+.|+.+|.+|+..| +-|-|.- .++. ..+-..|. |.-
T Consensus 2 ~~~~etfSyLP--~ltdeqI~kQI~YlL~qGw~p~-lE~~d~~--------------~~r~-------~yW~mWkL-PmF 56 (139)
T 1bxn_I 2 RITQGTFSFLP--ELTDEQITKQLEYCLNQGWAVG-LEYTDDP--------------HPRN-------TYWEMFGL-PMF 56 (139)
T ss_dssp CCCCSBTTTSS--CCCHHHHHHHHHHHHHHTCEEE-EEEESCC--------------CTTC-------CCCEESSS-CBT
T ss_pred ceecceeccCC--CCCHHHHHHHHHHHHHCCCeEE-EEeccCC--------------cccc-------CEEeecCC-CCc
Confidence 46778876533 4677899999999999999886 6666531 1121 22333222 222
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcccEEEEe
Q 020082 86 VKMTSSIVRESIDVSRRRMDVPCLDMLQFH 115 (331)
Q Consensus 86 ~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH 115 (331)
...++..+...|++-++.---.||=|+=+.
T Consensus 57 ~~td~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (139)
T 1bxn_I 57 DLRDAAGILMEINNARNTFPNHYIRVTAFD 86 (139)
T ss_dssp TCCCHHHHHHHHHHHHHHCSSSEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 234688888888888877766666665443
No 126
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.33 E-value=61 Score=26.17 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHc-CcccEEecCccc--HHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 124 YLDALNHLTDLKEE-GKIKTVALTNFD--TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 124 ~~e~~~~l~~l~~~-Gkir~iGvS~~~--~~~l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
..+++.+|..+++. +||.-+|..|.. ...+..+.. .+..+..|+ +.+.-+..+..+++.|+.++.-..
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~----~~i~~~~~~--~~~e~~~~i~~l~~~G~~vvVG~~ 150 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG----VKIKEFLFS--SEDEITTLISKVKTENIKIVVSGK 150 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT----CEEEEEEEC--SGGGHHHHHHHHHHTTCCEEEECH
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC----CceEEEEeC--CHHHHHHHHHHHHHCCCeEEECCH
Confidence 46899999999986 668888888753 445555553 333443343 233335789999999998876543
No 127
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=36.22 E-value=80 Score=28.35 Aligned_cols=73 Identities=12% Similarity=0.080 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.+++++-.|- ..|=+.++.++++++++.+ .++++|+..+-.-- .....+...|+++|+.++..+.+.+|
T Consensus 231 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~ 305 (377)
T 3my9_A 231 LDAMAGFAAALDTPILADESCFDAVDLMEVVRRQ-AADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGG 305 (377)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHT-CCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCSH
T ss_pred HHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCCCCCcH
Confidence 56667777654443 4455567888898888765 57778876554311 12357899999999999776554443
No 128
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=35.99 E-value=1.1e+02 Score=26.02 Aligned_cols=22 Identities=9% Similarity=0.136 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHHHHHcCCCcccE
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDM 111 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl 111 (331)
+.+...+.++. |..-|.|.|.+
T Consensus 30 ~~~~~~~~~~~-l~~~GaD~iEl 51 (267)
T 3vnd_A 30 SPELSLKIIQT-LVDNGADALEL 51 (267)
T ss_dssp CHHHHHHHHHH-HHHTTCSSEEE
T ss_pred CHHHHHHHHHH-HHHcCCCEEEE
Confidence 45655554443 55567655444
No 129
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=35.81 E-value=1e+02 Score=27.78 Aligned_cols=94 Identities=12% Similarity=-0.025 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-----CcccEEecCcccHHHHHHHHHcCCC
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKIKTVALTNFDTERLRIILENGIP 162 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-----Gkir~iGvS~~~~~~l~~~~~~~~~ 162 (331)
++.+...+- +++| +..++.++..|-+ . -++.+.+++++ -.|--.+--.++++.++++++.+ .
T Consensus 212 ~~~~~ai~~----~~~l--~~~~i~~iE~P~~--~----d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~-~ 278 (392)
T 3p3b_A 212 YNLNLTKEV----LAAL--SDVNLYWLEEAFH--E----DEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRG-R 278 (392)
T ss_dssp CCHHHHHHH----HHHT--TTSCEEEEECSSS--C----CHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTT-S
T ss_pred CCHHHHHHH----HHHH--HhcCCCEEecCCc--c----cHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcC-C
Confidence 465554443 3333 2346667777754 2 24455666655 34433332256778888888755 5
Q ss_pred eeeecccccccccCh-hhhHHHHHHHhCCeEEEc
Q 020082 163 VVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITY 195 (331)
Q Consensus 163 ~~~vq~~~nl~~~~~-~~~~~~~~~~~gi~via~ 195 (331)
++++|+..+-. --. ...+...|+++|+.++..
T Consensus 279 ~d~v~ik~~~~-Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 279 VDVLQYDIIWP-GFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp CCEECCBTTTB-CHHHHHHHHHHHHHTTCEECCB
T ss_pred CCEEEeCcccc-CHHHHHHHHHHHHHcCCEEEec
Confidence 88888877664 222 257899999999999886
No 130
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=35.68 E-value=67 Score=21.86 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=39.3
Q ss_pred HHHHHHcCcccEEecCcccHHHHHHHHHcC-CCeeeecccccccccChhhhHHHHHHHhCCeEEEcc
Q 020082 131 LTDLKEEGKIKTVALTNFDTERLRIILENG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 131 l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~-~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~ 196 (331)
++.+++.|++.. ...+..++++.+ ..+.++-...++ ..-..+..+|++++|+++-+.
T Consensus 3 ~~~~~kagk~~~------G~~~v~kai~~gkaklViiA~D~~~---~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSIII------GTKQTVKALKRGSVKEVVVAKDADP---ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEEE------SHHHHHHHHTTTCEEEEEEETTSCH---HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCeeE------cHHHHHHHHHcCCeeEEEEeCCCCH---HHHHHHHHHHHHcCCCEEEEC
Confidence 677888998754 567777777765 345555544443 223468888999999998765
No 131
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=35.56 E-value=2.4e+02 Score=25.18 Aligned_cols=95 Identities=16% Similarity=0.054 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcC-cccEEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~G-kir~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+..| +++.++..|-+. +-++.+.+++++- .|--.+--+.+.+.++++++.+ .++++
T Consensus 201 ~~~~~a~~~~~~-l~~~g---~~i~~iEqP~~~-----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~-~~d~v 270 (389)
T 2oz8_A 201 WTSKEALTKLVA-IREAG---HDLLWVEDPILR-----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAH-AADIL 270 (389)
T ss_dssp BCHHHHHHHHHH-HHHTT---CCCSEEESCBCT-----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-HHhcC---CCceEEeCCCCC-----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcC-CCCEE
Confidence 466766665544 77732 233455555322 2356677777764 5544433333889999998865 57888
Q ss_pred cccccccccChhhhHHHHHHHhCCeEEEc
Q 020082 167 QVQHSVVDMRPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 167 q~~~nl~~~~~~~~~~~~~~~~gi~via~ 195 (331)
|+.-.+ .....+...|+++|+.++..
T Consensus 271 ~ikGGi---t~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 271 NVHGQV---TDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp EECSCH---HHHHHHHHHHHHHTCCEEEC
T ss_pred EECcCH---HHHHHHHHHHHHcCCeEeec
Confidence 887111 12257899999999999998
No 132
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=34.87 E-value=1.5e+02 Score=24.46 Aligned_cols=47 Identities=17% Similarity=0.347 Sum_probs=28.5
Q ss_pred cHHHHHHHHH-cCCCeeeecccccccccCh--------hhhHHHHHHHhCCeEEEc
Q 020082 149 DTERLRIILE-NGIPVVSNQVQHSVVDMRP--------QQKMAELCQLTGVKLITY 195 (331)
Q Consensus 149 ~~~~l~~~~~-~~~~~~~vq~~~nl~~~~~--------~~~~~~~~~~~gi~via~ 195 (331)
....++++++ .|+.+.++....|+..... -+..++.|++.|+..+..
T Consensus 48 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~ 103 (281)
T 3u0h_A 48 GDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTA 103 (281)
T ss_dssp CHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3455555554 3555555555555543221 135889999999988873
No 133
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=34.69 E-value=1.6e+02 Score=26.17 Aligned_cols=58 Identities=12% Similarity=0.073 Sum_probs=38.4
Q ss_pred CcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 146 TNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 146 S~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
...+.+.+++++....+..++....|+.-. .+-+++.+.|+++|+-++.=.+++.+.+
T Consensus 137 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~ 195 (392)
T 3qhx_A 137 ALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL 195 (392)
T ss_dssp CTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT
T ss_pred CCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 334677777776533345555555565321 2346899999999999999888876644
No 134
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=34.59 E-value=1.1e+02 Score=27.64 Aligned_cols=97 Identities=11% Similarity=0.020 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeec
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
+.+...+-++ .|+.++ +.++..|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|
T Consensus 218 ~~~~A~~~~~-~L~~~~-----i~~iEeP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~ 285 (394)
T 3mkc_A 218 DWYEVARLLN-SIEDLE-----LYFAEATLQHD-----DLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKG-KVHLLQ 285 (394)
T ss_dssp CHHHHHHHHH-HTGGGC-----CSEEESCSCTT-----CHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTT-CCSEEC
T ss_pred CHHHHHHHHH-HhhhcC-----CeEEECCCCch-----hHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC-CCCeEe
Confidence 4554443332 345554 44455654322 245667777765554 4444557888999998865 588888
Q ss_pred cccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 168 VQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 168 ~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+..+-.-- .....+...|+++|+.++..+.
T Consensus 286 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 286 SDYNRCGGLTELRRITEMATANNVQVMPHNW 316 (394)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 87665311 1235789999999999987764
No 135
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=34.37 E-value=2.1e+02 Score=25.74 Aligned_cols=100 Identities=15% Similarity=0.058 Sum_probs=58.4
Q ss_pred HHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHH-HHHcC-cccEEecCcccHHHHHHHHHcCCCeeeeccccccc
Q 020082 96 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTD-LKEEG-KIKTVALTNFDTERLRIILENGIPVVSNQVQHSVV 173 (331)
Q Consensus 96 ~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~-l~~~G-kir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~ 173 (331)
++...++.+ +..=|-+.+-.+.+ ......+.. +...| ++..+- ..+.+.+++++....+..++..+.|+.
T Consensus 108 Ai~~al~~l-~~~Gd~Vi~~~~~y-----~~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~ai~~~t~~v~le~p~Npt 179 (414)
T 3ndn_A 108 AVFTSLGAL-LGAGDRLVAARSLF-----GSCFVVCSEILPRWGVQTVFVD--GDDLSQWERALSVPTQAVFFETPSNPM 179 (414)
T ss_dssp HHHHHHHTT-CCTTCEEEEESCCC-----HHHHHHHHTHHHHTTCEEEEEC--TTCHHHHHHHTSSCCSEEEEESSCTTT
T ss_pred HHHHHHHHH-hCCCCEEEEcCCcc-----chHHHHHHHHHHHcCcEEEEeC--CCCHHHHHHhcCCCCeEEEEECCCCCC
Confidence 344444444 23336666655543 233344433 22333 344443 337788888776455666666666764
Q ss_pred cc-ChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 174 DM-RPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 174 ~~-~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
-. .+-+.+.+.|+++|+-++.=.+++.|.+
T Consensus 180 G~~~~l~~i~~la~~~g~~livDe~~~~~~~ 210 (414)
T 3ndn_A 180 QSLVDIAAVTELAHAAGAKVVLDNVFATPLL 210 (414)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEECTTTHHHH
T ss_pred CccccHHHHHHHHHHcCCEEEEECCCccccc
Confidence 22 2236899999999999999887775543
No 136
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=34.28 E-value=1.9e+02 Score=25.78 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=56.5
Q ss_pred cccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHH
Q 020082 108 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 185 (331)
Q Consensus 108 ~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~ 185 (331)
.+++.++..|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|
T Consensus 222 ~~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~~ia~~A 295 (372)
T 3tj4_A 222 DLDIYWFEEPLWYD-----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAG-AVAYVQPDVTRLGGITEYIQVADLA 295 (372)
T ss_dssp TSCEEEEESCSCTT-----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHH
T ss_pred hcCCCEEECCCCch-----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHHHHHH
Confidence 35677777765422 255667777654453 4555668899999998865 57888887664311 1235789999
Q ss_pred HHhCCeEEEcc
Q 020082 186 QLTGVKLITYG 196 (331)
Q Consensus 186 ~~~gi~via~~ 196 (331)
+++|+.++..+
T Consensus 296 ~~~gi~~~~h~ 306 (372)
T 3tj4_A 296 LAHRLPVVPHA 306 (372)
T ss_dssp HHTTCCBCCCC
T ss_pred HHcCCEEEecC
Confidence 99999988765
No 137
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=34.21 E-value=2.7e+02 Score=25.36 Aligned_cols=97 Identities=10% Similarity=0.082 Sum_probs=60.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-Ccc-cEEecCcccHHHHHHHHHcCCCee
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKI-KTVALTNFDTERLRIILENGIPVV 164 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-Gki-r~iGvS~~~~~~l~~~~~~~~~~~ 164 (331)
.++.+...+-++. |+.++.++ +..|-+. +-++.+.+++++ +.| -..|=+.++++.++++++.+ .++
T Consensus 252 ~~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d 319 (441)
T 2hxt_A 252 RWDVGPAIDWMRQ-LAEFDIAW-----IEEPTSP-----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAG-AVD 319 (441)
T ss_dssp CCCHHHHHHHHHT-TGGGCCSC-----EECCSCT-----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHT-CCS
T ss_pred CCCHHHHHHHHHH-HHhcCCCe-----eeCCCCH-----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcC-CCC
Confidence 3566665555544 66666554 4555322 235556666665 233 34455567899999998865 588
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 165 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 165 ~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
++|+..+-.-- .....+...|+++|+.++.+
T Consensus 320 ~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 320 LIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp EECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred EEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 88887665311 11247889999999998644
No 138
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=34.00 E-value=2.5e+02 Score=24.79 Aligned_cols=103 Identities=7% Similarity=-0.005 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+- -+.|+.++.++|. .|-+.. -++.+.+++++-.|- ..|=+.++.++++++++.+..++++
T Consensus 195 ~~~~~a~~~-~~~l~~~~i~~iE-----qP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v 263 (356)
T 3ro6_B 195 YDRDGLLRL-DRLVQELGIEFIE-----QPFPAG-----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIF 263 (356)
T ss_dssp CCHHHHHHH-HHHHHHTTCCCEE-----CCSCTT-----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEE
T ss_pred CCHHHHHHH-HHHHHhcCCCEEE-----CCCCCC-----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEE
Confidence 455554433 3456777666554 443221 345566665543343 4455667889999988754258888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
|+..+-.-- .....+...|+++|+.++..+.+.++
T Consensus 264 ~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 264 NIKLMKCGGLAPARRIATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp EECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSCCH
T ss_pred EEcccccCCHHHHHHHHHHHHHcCCEEEecCCcccH
Confidence 887654311 12357899999999999987765444
No 139
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=33.82 E-value=1.1e+02 Score=27.78 Aligned_cols=97 Identities=11% Similarity=0.062 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-+ +.|+.++.++ +..|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ ++++
T Consensus 202 ~~~~~A~~~~-~~L~~~~i~~-----iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~--~d~v 268 (393)
T 4dwd_A 202 YSVGGAIRVG-RALEDLGYSW-----FEEPVQHY-----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG--VRMV 268 (393)
T ss_dssp CCHHHHHHHH-HHHHHTTCSE-----EECCSCTT-----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT--CCEE
T ss_pred CCHHHHHHHH-HHHHhhCCCE-----EECCCCcc-----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC--CCEE
Confidence 4555544433 3466666544 44443221 356677777765553 3344557889999998866 8889
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
|+..+..-- .....+...|+++|+.++..+.
T Consensus 269 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 269 QPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp CCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 987765311 1235789999999999998876
No 140
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=33.78 E-value=32 Score=28.79 Aligned_cols=68 Identities=9% Similarity=0.033 Sum_probs=39.5
Q ss_pred HHHHHHHHcCcccEEecCc-----ccHHHHHHHHH-cCCCeeeecccccccccCh---------hhhHHHHHHHhCCeEE
Q 020082 129 NHLTDLKEEGKIKTVALTN-----FDTERLRIILE-NGIPVVSNQVQHSVVDMRP---------QQKMAELCQLTGVKLI 193 (331)
Q Consensus 129 ~~l~~l~~~Gkir~iGvS~-----~~~~~l~~~~~-~~~~~~~vq~~~nl~~~~~---------~~~~~~~~~~~gi~vi 193 (331)
+.++.+++.|- ..|-+.. .....++++++ .|+.+.++....++....+ -+..++.|++.|+.++
T Consensus 22 ~~l~~~~~~G~-~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v 100 (275)
T 3qc0_A 22 EAVDICLKHGI-TAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCL 100 (275)
T ss_dssp HHHHHHHHTTC-CEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHcCC-CEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 44566666663 5666554 23445555554 4666655554334433222 1368889999999888
Q ss_pred Eccc
Q 020082 194 TYGT 197 (331)
Q Consensus 194 a~~~ 197 (331)
...+
T Consensus 101 ~~~~ 104 (275)
T 3qc0_A 101 VLVA 104 (275)
T ss_dssp EEEC
T ss_pred EEee
Confidence 7654
No 141
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=33.76 E-value=55 Score=28.25 Aligned_cols=46 Identities=7% Similarity=0.094 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 150 TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 150 ~~~l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
++.++.+.+.|+.-.++|-.-+++-+ .++++++|.++||.+++..|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~--~~~~i~~a~~~gi~~~~~~~ 279 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVD--REAVIAAADDLGLFVLGVDP 279 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETT--HHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeC--HHHHHHHHHHcCCEEEEeCC
Confidence 68888888888777778999998643 35899999999999998876
No 142
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=33.31 E-value=94 Score=25.72 Aligned_cols=88 Identities=8% Similarity=0.083 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCc-ccHHHHHHHHHcCCCeeeec
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN-FDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~-~~~~~l~~~~~~~~~~~~vq 167 (331)
+++.... +-+.|-.=|.+.|.+ ...++.-.+.++.|.+-. .. -.||..+ .+.++++.+++.|-+|.+.
T Consensus 23 ~~~~a~~-~a~al~~gGi~~iEv------t~~t~~a~~~I~~l~~~~--p~-~~IGAGTVlt~~~a~~ai~AGA~fivs- 91 (217)
T 3lab_A 23 DLVHAIP-MAKALVAGGVHLLEV------TLRTEAGLAAISAIKKAV--PE-AIVGAGTVCTADDFQKAIDAGAQFIVS- 91 (217)
T ss_dssp CGGGHHH-HHHHHHHTTCCEEEE------ETTSTTHHHHHHHHHHHC--TT-SEEEEECCCSHHHHHHHHHHTCSEEEE-
T ss_pred CHHHHHH-HHHHHHHcCCCEEEE------eCCCccHHHHHHHHHHHC--CC-CeEeeccccCHHHHHHHHHcCCCEEEe-
Confidence 4444443 344566668766655 122332334444444333 22 4677765 4899999999988666532
Q ss_pred ccccccccChhhhHHHHHHHhCC------eEEE
Q 020082 168 VQHSVVDMRPQQKMAELCQLTGV------KLIT 194 (331)
Q Consensus 168 ~~~nl~~~~~~~~~~~~~~~~gi------~via 194 (331)
+ ....+++++|+++|+ .+++
T Consensus 92 ----P---~~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 92 ----P---GLTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp ----S---SCCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred ----C---CCcHHHHHHHHHcCCCccCCCeEeC
Confidence 2 224589999999999 7775
No 143
>3h0g_D DNA-directed RNA polymerase II subunit RPB4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=32.90 E-value=1.1e+02 Score=23.25 Aligned_cols=77 Identities=10% Similarity=0.063 Sum_probs=50.3
Q ss_pred HHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHH
Q 020082 227 QKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVN 306 (331)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~ 306 (331)
.+...+..+|... ...+.+..++++-.. +++..++|. +.+ ..+.+ +++++..+..+..+++++++.
T Consensus 56 ~kTl~Yl~~Fsk~-~~~e~~~~v~~lL~~-~L~~fEia~--L~N--------L~P~t--~dEak~LIpsL~~r~~de~L~ 121 (135)
T 3h0g_D 56 KKTVAYFNVFARF-KTAEATYACERILGN-RFHKFERAQ--LGT--------LCCED--AEEARTLIPSLANKIDDQNLQ 121 (135)
T ss_dssp HHHHHHHHTTCTT-CSHHHHHHHHHHCCC-CSCHHHHHH--HHH--------HCCCC--HHHHHHHCGGGTTTSCSHHHH
T ss_pred HHHHHHHHHccCC-CCHHHHHHHHHHHHh-cCCHHHHHH--Hcc--------CCCCC--HHHHHHHHHHhcccCCHHHHH
Confidence 3333444455432 122334455555555 888888866 333 33456 999999999988789999999
Q ss_pred HHHHHhhcCCC
Q 020082 307 SIQEVTKKGKD 317 (331)
Q Consensus 307 ~l~~~~~~~~~ 317 (331)
.|-+.....+.
T Consensus 122 ~IL~~l~~~r~ 132 (135)
T 3h0g_D 122 GILDELSTLRK 132 (135)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 98888776653
No 144
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=32.35 E-value=18 Score=23.31 Aligned_cols=23 Identities=26% Similarity=0.356 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Q 020082 245 LLQTLKRIASKHGVSIPVVAVRY 267 (331)
Q Consensus 245 ~~~~l~~ia~~~g~s~aq~Al~~ 267 (331)
.-..++.+-.+.|+|..++|-+-
T Consensus 9 ~g~~l~~~r~~~glsq~~lA~~~ 31 (71)
T 2ewt_A 9 LGAKLRAIRTQQGLSLHGVEEKS 31 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Confidence 34677888888889888877653
No 145
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=32.29 E-value=1.1e+02 Score=27.79 Aligned_cols=98 Identities=11% Similarity=0.015 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecC-CCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWW-DYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~-d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~ 165 (331)
++.+...+-+ +.|+.++ +.++..| -+.. -++.+.+++++-.|- ..|=|.++.++++++++.+ .+++
T Consensus 224 ~~~~~A~~~~-~~L~~~~-----i~~iEqP~~~~~-----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~ 291 (410)
T 3dip_A 224 WGTHAAARIC-NALADYG-----VLWVEDPIAKMD-----NIPAVADLRRQTRAPICGGENLAGTRRFHEMLCAD-AIDF 291 (410)
T ss_dssp BCHHHHHHHH-HHGGGGT-----CSEEECCBSCTT-----CHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHH-HHHHhcC-----CCEEECCCCCcc-----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCe
Confidence 4555443322 3355554 4455555 3322 244556666654443 4455667899999998865 5888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+|+..+-.-- .....+...|+++|+.++..+.
T Consensus 292 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 292 VMLDLTWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp EEECTTTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred EeecccccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 8887765421 2235789999999999988765
No 146
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=32.25 E-value=2.9e+02 Score=25.15 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-C-cccEEe-cCccc-HHHHHHHHHcCCCe
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-G-KIKTVA-LTNFD-TERLRIILENGIPV 163 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-G-kir~iG-vS~~~-~~~l~~~~~~~~~~ 163 (331)
++++...+-+++.++.+ ++++|-.|-+... |+.+.+|.++ | +|--+| =+.++ ++.++++++.+ .+
T Consensus 261 ~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD-----~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~-a~ 329 (417)
T 3qn3_A 261 FSSEALIERYVELCAKY-----PICSIEDGLAEND-----FEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKK-MA 329 (417)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESSSCTTC-----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHT-CC
T ss_pred cCHHHHHHHHHHHHhhc-----ceeEEecCCCccc-----HHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhC-CC
Confidence 35666666666656654 4888888754433 3344444443 3 454333 23355 89999998765 47
Q ss_pred eeeccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 164 VSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 164 ~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+++|+..|-.-- .....+...|+.+|+.++.-..
T Consensus 330 d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~ 364 (417)
T 3qn3_A 330 NAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHR 364 (417)
T ss_dssp SEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 777777664311 1235788999999999876553
No 147
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=32.08 E-value=1.4e+02 Score=24.81 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeecc
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQV 168 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~ 168 (331)
+++...+-. +.|-.-|.+ ++.+-.- ++.-.+.++.+.+-.. +.+.-.|. ..+.++++.+++.|-.|.+
T Consensus 44 ~~~~a~~~a-~al~~gGi~---~iEvt~~---t~~a~e~I~~l~~~~~-~~~iGaGT-Vlt~~~a~~Ai~AGA~fIv--- 111 (232)
T 4e38_A 44 NAEDIIPLG-KVLAENGLP---AAEITFR---SDAAVEAIRLLRQAQP-EMLIGAGT-ILNGEQALAAKEAGATFVV--- 111 (232)
T ss_dssp SGGGHHHHH-HHHHHTTCC---EEEEETT---STTHHHHHHHHHHHCT-TCEEEEEC-CCSHHHHHHHHHHTCSEEE---
T ss_pred CHHHHHHHH-HHHHHCCCC---EEEEeCC---CCCHHHHHHHHHHhCC-CCEEeECC-cCCHHHHHHHHHcCCCEEE---
Confidence 344444333 345566755 4444322 2223344444444332 34333343 3579999999988866653
Q ss_pred cccccccChhhhHHHHHHHhCCeEEE
Q 020082 169 QHSVVDMRPQQKMAELCQLTGVKLIT 194 (331)
Q Consensus 169 ~~nl~~~~~~~~~~~~~~~~gi~via 194 (331)
++ ....+++++|++.|+.+++
T Consensus 112 --sP---~~~~~vi~~~~~~gi~~ip 132 (232)
T 4e38_A 112 --SP---GFNPNTVRACQEIGIDIVP 132 (232)
T ss_dssp --CS---SCCHHHHHHHHHHTCEEEC
T ss_pred --eC---CCCHHHHHHHHHcCCCEEc
Confidence 22 1245799999999999886
No 148
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=31.62 E-value=1.9e+02 Score=25.98 Aligned_cols=92 Identities=11% Similarity=0.029 Sum_probs=59.1
Q ss_pred HHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-Ch
Q 020082 100 SRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RP 177 (331)
Q Consensus 100 SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~ 177 (331)
-+++|. +.+++ ++-.|-+ -++.+.+++++-.|- ..|=|.++.+.++++++.+ .++++|+..+..-- ..
T Consensus 213 ~~~~l~-~~~~i-~iEeP~~-------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 213 MLSLLP-PGLDI-VLEAPCA-------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDD-LCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHSC-SSCCC-EEECCCS-------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHH
T ss_pred HHHHhh-ccCCc-EEecCCC-------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC-CCCEEEECccccCCHHH
Confidence 345553 34566 6666543 245567777665453 4455667888888888754 57778876554311 12
Q ss_pred hhhHHHHHHHhCCeEEEccccccc
Q 020082 178 QQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 178 ~~~~~~~~~~~gi~via~~~l~~G 201 (331)
...+...|+++|+.++..+.+.++
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHcCCEEEeCCCCCCH
Confidence 357899999999999977665544
No 149
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=31.13 E-value=85 Score=28.47 Aligned_cols=83 Identities=13% Similarity=-0.002 Sum_probs=54.3
Q ss_pred cEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHH
Q 020082 110 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQL 187 (331)
Q Consensus 110 Dl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~ 187 (331)
++.+++.|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+.
T Consensus 237 ~i~~iEeP~~~~-----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-a~d~v~~d~~~~GGit~~~kia~~A~~ 310 (400)
T 4dxk_A 237 QTFWHEDPIKMD-----SLSSLTRYAAVSPAPISASETLGSRWAFRDLLETG-AAGVVMLDISWCGGLSEARKIASMAEA 310 (400)
T ss_dssp CCSEEECCBCTT-----SGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTT-CCCEEEECTTTTTHHHHHHHHHHHHHH
T ss_pred CCCEEEcCCCcc-----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 455566664321 244567777765554 4445567889999998865 58888887665311 123578999999
Q ss_pred hCCeEEEcccc
Q 020082 188 TGVKLITYGTV 198 (331)
Q Consensus 188 ~gi~via~~~l 198 (331)
+|+.++..+..
T Consensus 311 ~gi~~~~h~~~ 321 (400)
T 4dxk_A 311 WHLPVAPHXCT 321 (400)
T ss_dssp TTCCEEEC-CC
T ss_pred cCCEEEecCCC
Confidence 99999987653
No 150
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=30.92 E-value=1.1e+02 Score=27.63 Aligned_cols=97 Identities=10% Similarity=0.005 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccE-EecCcccHHHHHHHHHcCCCeeeec
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKT-VALTNFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~-iGvS~~~~~~l~~~~~~~~~~~~vq 167 (331)
+.+...+-+ +.|+.+| +.++..|-+.. -++.+.+++++-.|-- .|=+.++++.++++++.+ .++++|
T Consensus 213 ~~~~A~~~~-~~L~~~~-----i~~iEeP~~~~-----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~ 280 (394)
T 3mqt_A 213 DWQKARWTF-RQLEDID-----LYFIEACLQHD-----DLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKT-GISVVQ 280 (394)
T ss_dssp CHHHHHHHH-HHTGGGC-----CSEEESCSCTT-----CHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHH-CCSEEC
T ss_pred CHHHHHHHH-HHHhhcC-----CeEEECCCCcc-----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCeEe
Confidence 455443333 2355554 44455554322 2456777777655543 344457788898888755 478888
Q ss_pred cccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 168 VQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 168 ~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+..+-.-- .....+...|+.+|+.++..+.
T Consensus 281 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 281 SDYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp CCTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 87665311 1235789999999999987764
No 151
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=30.80 E-value=1.6e+02 Score=26.64 Aligned_cols=70 Identities=13% Similarity=0.125 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHc-----Ccc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 126 DALNHLTDLKEE-----GKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 126 e~~~~l~~l~~~-----Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
+-++.|.+|.++ -.| -..|=|.++.+.++++++.+ .++++|+..+-+-- .....+...|+++|+.++..+
T Consensus 283 ~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kcz_A 283 KQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNK-AGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTT-CSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECC
T ss_pred ccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhC-CCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 345666666655 233 23444557788888887754 47778877665421 123578999999999999875
No 152
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=30.61 E-value=1.8e+02 Score=22.15 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=52.9
Q ss_pred ceeeeccccCCCCCCchhhHHHHHHHHHHHhhhcCCccEEECCCCchHHHHHHHHhhhhcCCCccchheeeecccccCCC
Q 020082 6 RDVADEWRVGPYRPGRRRRCHASLRRCRSHHLRHGRSLSFDFVDGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPP 85 (331)
Q Consensus 6 ~l~lGt~~~g~~~~~~~~~~~~~l~~al~~~~~~GGin~~DTA~g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~ 85 (331)
+|.+||.++=. ..++++..+.|+.+|.+|+..+ +-|-|.. .++. ..+-..|. |.-
T Consensus 2 ~~~~etfSyLP--~ltdeqI~kQI~Yll~qGw~p~-iEf~d~~--------------~~r~-------~yW~mWkL-PmF 56 (138)
T 1bwv_S 2 RITQGTFSFLP--DLTDEQIKKQIDYMISKKLAIG-IEYTNDI--------------HPRN-------AYWEIWGL-PLF 56 (138)
T ss_dssp CCCCSTTTTSC--CCCHHHHHHHHHHHHHTTCEEE-EEEESCC--------------CTTC-------CCCEECSS-CBC
T ss_pred ceecceeccCC--CCCHHHHHHHHHHHHHCCCeee-EEecCCC--------------CCcc-------CEEeccCC-CCc
Confidence 46678876532 4577889999999999998886 6665521 1121 22333222 222
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcccEEEE
Q 020082 86 VKMTSSIVRESIDVSRRRMDVPCLDMLQF 114 (331)
Q Consensus 86 ~~~~~~~i~~~~~~SL~rLg~d~lDl~~l 114 (331)
...++..+...|++-++.---.||=|+=+
T Consensus 57 ~~td~~~Vl~Ele~C~k~~p~~YVRliGf 85 (138)
T 1bwv_S 57 DVTDPAAVLFEINACRKARSNFYIKVVGF 85 (138)
T ss_dssp SCCCHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 23478888888888888776566555433
No 153
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=30.31 E-value=80 Score=28.18 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=48.9
Q ss_pred HHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.+++++-.|--.+- +.++++.++++++.+ .++++|+..+..-- .....+...|+++|+.++..+.+..+
T Consensus 228 ~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 228 WRECISLRRKTDIPIIYDELATNEMSIVKILADD-AAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHT-CCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCCH
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC-CCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCCCcCH
Confidence 566777776655544433 346788888888755 47777776554311 12247889999999999988776544
No 154
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=30.09 E-value=1.6e+02 Score=24.28 Aligned_cols=48 Identities=17% Similarity=0.165 Sum_probs=29.4
Q ss_pred cHHHHHHHHH-cCCCeeeecccccccccCh---------hhhHHHHHHHhCCeEEEcc
Q 020082 149 DTERLRIILE-NGIPVVSNQVQHSVVDMRP---------QQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 149 ~~~~l~~~~~-~~~~~~~vq~~~nl~~~~~---------~~~~~~~~~~~gi~via~~ 196 (331)
...+++++++ .|+.+..+...+++....+ -+..++.|++.|+..+...
T Consensus 47 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~ 104 (278)
T 1i60_A 47 SLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAV 104 (278)
T ss_dssp CHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 4455555554 3556665665555542221 1368889999999888764
No 155
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=29.90 E-value=1.7e+02 Score=26.82 Aligned_cols=26 Identities=8% Similarity=0.155 Sum_probs=13.9
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEe
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFH 115 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH 115 (331)
+.+.+.+.++.. ..|+.|++.+|.+.
T Consensus 218 t~e~~~~tl~~~-~~l~~~~i~~y~l~ 243 (457)
T 1olt_A 218 TPESFAFTLKRV-AELNPDRLSVFNYA 243 (457)
T ss_dssp CHHHHHHHHHHH-HHHCCSEEEEEECC
T ss_pred CHHHHHHHHHHH-HhcCcCEEEeecCc
Confidence 455555555543 34566666655443
No 156
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=29.82 E-value=14 Score=23.42 Aligned_cols=21 Identities=5% Similarity=0.048 Sum_probs=12.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHH
Q 020082 247 QTLKRIASKHGVSIPVVAVRY 267 (331)
Q Consensus 247 ~~l~~ia~~~g~s~aq~Al~~ 267 (331)
+.++.+..+.|+|..++|-+.
T Consensus 8 ~~l~~~r~~~g~s~~~lA~~~ 28 (68)
T 2r1j_L 8 ERIRARRKKLKIRQAALGKMV 28 (68)
T ss_dssp HHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 455666666677766666544
No 157
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=29.46 E-value=2.9e+02 Score=24.70 Aligned_cols=98 Identities=9% Similarity=0.086 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCc-ccEEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gk-ir~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+. +..+-+.|.++|+++|.+-+ |. .. ....++++.+++.|+ ++..+.+....+.++++.+.+.+...+
T Consensus 22 ~~~~~-k~~ia~~L~~~Gv~~IE~g~---p~-~~---~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v~i 93 (382)
T 2ztj_A 22 FSTQD-KVEIAKALDEFGIEYIEVTT---PV-AS---PQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGIDL 93 (382)
T ss_dssp CCHHH-HHHHHHHHHHHTCSEEEECC---TT-SC---HHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEcC---Cc-CC---HHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEEEE
Confidence 45554 44455668899999999842 32 12 345677777777664 334444444567788888876553222
Q ss_pred cccccc-----cccCh------hhhHHHHHHHhC--CeEE
Q 020082 167 QVQHSV-----VDMRP------QQKMAELCQLTG--VKLI 193 (331)
Q Consensus 167 q~~~nl-----~~~~~------~~~~~~~~~~~g--i~vi 193 (331)
-+..|- +.... -.+.++++++.| +.+.
T Consensus 94 ~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~ 133 (382)
T 2ztj_A 94 LFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVR 133 (382)
T ss_dssp EECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 222221 11111 146789999999 6654
No 158
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=29.36 E-value=2.3e+02 Score=23.13 Aligned_cols=19 Identities=5% Similarity=0.275 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHcCCCcccEE
Q 020082 93 VRESIDVSRRRMDVPCLDML 112 (331)
Q Consensus 93 i~~~~~~SL~rLg~d~lDl~ 112 (331)
+.+.++. ++++|.++|++.
T Consensus 21 ~~~~l~~-~~~~G~~~vEl~ 39 (272)
T 2q02_A 21 IEAFFRL-VKRLEFNKVELR 39 (272)
T ss_dssp HHHHHHH-HHHTTCCEEEEE
T ss_pred HHHHHHH-HHHcCCCEEEee
Confidence 3444444 567899988886
No 159
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=29.31 E-value=19 Score=23.61 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=16.0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHH
Q 020082 246 LQTLKRIASKHGVSIPVVAVRYI 268 (331)
Q Consensus 246 ~~~l~~ia~~~g~s~aq~Al~~~ 268 (331)
...++.+..+.|+|..++|-+--
T Consensus 9 ~~~l~~~r~~~g~sq~~lA~~~g 31 (78)
T 3b7h_A 9 SEHLMELITQQNLTINRVATLAG 31 (78)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHC
Confidence 36677777778888877775543
No 160
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=29.24 E-value=2.6e+02 Score=23.68 Aligned_cols=17 Identities=18% Similarity=0.087 Sum_probs=14.4
Q ss_pred hhHHHHHHHhCCeEEEc
Q 020082 179 QKMAELCQLTGVKLITY 195 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~ 195 (331)
+..++.|++.|+..+..
T Consensus 111 ~~~i~~A~~lG~~~v~~ 127 (303)
T 3l23_A 111 KATAADHAKLGCKYLIQ 127 (303)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 46899999999988865
No 161
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=28.56 E-value=3e+02 Score=25.40 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHHH----HcCCC-cccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcC--C
Q 020082 89 TSSIVRESIDVSRR----RMDVP-CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENG--I 161 (331)
Q Consensus 89 ~~~~i~~~~~~SL~----rLg~d-~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~--~ 161 (331)
+.+.+...++.--+ |.|.. .+|++.|+.-..+. +......+.+++.=. .=+-+.+++++.++++++.+ .
T Consensus 103 ~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~dp---e~~~~vVk~V~e~~d-vPL~IDS~dpevleaALea~a~~ 178 (446)
T 4djd_C 103 SSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDP---AAFKAAVASVAAATQ-LNLVLMADDPDVLKEALAGVADR 178 (446)
T ss_dssp CHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSST---HHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHGGGGGG
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCCH---HHHHHHHHHHHHhCC-CCEEEecCCHHHHHHHHHhhcCc
Confidence 45556666555421 33312 68999998864322 344444444444311 24667789999999999742 2
Q ss_pred CeeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 162 PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 162 ~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
++.++-. ..+.-+.+.+.+++.|+.++++++
T Consensus 179 ~plI~sa-----t~dn~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 179 KPLLYAA-----TGANYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp CCEEEEE-----CTTTHHHHHHHHHHTTCCEEEECS
T ss_pred CCeeEec-----chhhHHHHHHHHHHcCCcEEEEec
Confidence 3333221 222234799999999999999976
No 162
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=28.17 E-value=1.2e+02 Score=25.51 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=24.2
Q ss_pred HHHHHHHcCCCeeeeccccccc-c--cChhhhHHHHHHHhCCeEEE
Q 020082 152 RLRIILENGIPVVSNQVQHSVV-D--MRPQQKMAELCQLTGVKLIT 194 (331)
Q Consensus 152 ~l~~~~~~~~~~~~vq~~~nl~-~--~~~~~~~~~~~~~~gi~via 194 (331)
.++.+.+.| ++.+++...-+ + ...-.++.+.++++|+.+.+
T Consensus 22 ~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 22 YIEKVAKLG--FDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHT--CSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcC--CCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 344444445 55555553211 1 11225788999999999887
No 163
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=28.08 E-value=2.5e+02 Score=24.05 Aligned_cols=19 Identities=11% Similarity=0.382 Sum_probs=14.9
Q ss_pred hhHHHHHHHhCCeEEEcccc
Q 020082 179 QKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~~~l 198 (331)
+..++.|++.|+.++ ..|.
T Consensus 112 ~~~i~~A~~lG~~~v-~~~~ 130 (335)
T 2qw5_A 112 KSRVDITAALGGEIM-MGPI 130 (335)
T ss_dssp HHHHHHHHHTTCSEE-EECC
T ss_pred HHHHHHHHHcCCCEE-eccc
Confidence 468899999999988 4443
No 164
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=27.97 E-value=2.5e+02 Score=24.57 Aligned_cols=106 Identities=14% Similarity=0.064 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCC---chHHHHHHHHHHHHHcCcccEEecC---cccHHHHHHHHH-cC
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN---PGYLDALNHLTDLKEEGKIKTVALT---NFDTERLRIILE-NG 160 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~---~~~~e~~~~l~~l~~~Gkir~iGvS---~~~~~~l~~~~~-~~ 160 (331)
++.+. +..+-+.|.++|+++|.+-+.-.|.... +.+. -++.|+.+++.-.++.-.+. |..++.+..+.. ..
T Consensus 21 ~~~~~-k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~-~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~ 98 (320)
T 3dxi_A 21 FNSKI-VDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYT-PVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPII 98 (320)
T ss_dssp CCHHH-HHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHC-CHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGT
T ss_pred CCHHH-HHHHHHHHHHhCCCEEEEecccCCccccccccccC-hHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhh
Confidence 44454 4455557899999999998876553211 1010 14444544443455655553 222334444432 11
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEEc
Q 020082 161 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 161 ~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~ 195 (331)
..++.+.+..++-+.+...++++++++.|+.+...
T Consensus 99 ~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 99 GLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 23444444433322222346788899999877654
No 165
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=27.84 E-value=2.8e+02 Score=25.69 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=42.9
Q ss_pred cccEEecC---cccHHHHHHHHHc----C--CCeeeecccccccc-cChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 139 KIKTVALT---NFDTERLRIILEN----G--IPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 139 kir~iGvS---~~~~~~l~~~~~~----~--~~~~~vq~~~nl~~-~~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
+++.+-+. ..+++.++++++. + ..+.++....|..- ..+-.++.+.|+++|+-++.=.+.++|.+
T Consensus 218 ~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~ 292 (511)
T 3vp6_A 218 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLL 292 (511)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred cEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHh
Confidence 45555543 2478888887752 2 23444555555432 23346899999999999999888888776
No 166
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=27.68 E-value=1.6e+02 Score=24.12 Aligned_cols=95 Identities=8% Similarity=0.097 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHH-HHHHcCcccEEecCcc---cHHHHHHHHH----cCCCee
Q 020082 93 VRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLT-DLKEEGKIKTVALTNF---DTERLRIILE----NGIPVV 164 (331)
Q Consensus 93 i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~-~l~~~Gkir~iGvS~~---~~~~l~~~~~----~~~~~~ 164 (331)
+.+.++. ++++|.+.|++...|.+.. .. .+.++.+. .+.+.|. ...+++.+ ..+.++++++ .|.+..
T Consensus 32 ~~~~l~~-~~~~G~~~vEl~~~~~~~~-~~--~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 32 LDTTLKT-LERLDIHYLCIKDFHLPLN-ST--DEQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp HHHHHHH-HHHTTCCEEEECTTTSCTT-CC--HHHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHH-HHHhCCCEEEEecccCCCC-CC--HHHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEE
Confidence 4444444 6789999999886664321 11 22334444 4445555 44444332 3444544443 455544
Q ss_pred eecccccccccChhhhHHHHHHHhCCeEEEcccc
Q 020082 165 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 165 ~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l 198 (331)
++... ...-+.+.+.|++.||.+ ++.+.
T Consensus 107 ~~~p~-----~~~l~~l~~~a~~~gv~l-~lEn~ 134 (257)
T 3lmz_A 107 VGVPN-----YELLPYVDKKVKEYDFHY-AIHLH 134 (257)
T ss_dssp EEEEC-----GGGHHHHHHHHHHHTCEE-EEECC
T ss_pred EecCC-----HHHHHHHHHHHHHcCCEE-EEecC
Confidence 33211 122357888899999864 45554
No 167
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=27.55 E-value=2.5e+02 Score=22.81 Aligned_cols=74 Identities=12% Similarity=0.007 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCc----ccHHHHHHHHHcCCCeee
Q 020082 90 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN----FDTERLRIILENGIPVVS 165 (331)
Q Consensus 90 ~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~----~~~~~l~~~~~~~~~~~~ 165 (331)
...+.+.+++.++.+|. ++. +..++.... .+...+.++.+.+.|++..|=+.. .....+.++.+.++|+.+
T Consensus 15 ~~~~~~gi~~~~~~~g~---~~~-~~~~~~~~~-~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~ 89 (276)
T 3ksm_A 15 WRQVYLGAQKAADEAGV---TLL-HRSTKDDGD-IAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLV 89 (276)
T ss_dssp HHHHHHHHHHHHHHHTC---EEE-ECCCSSTTC-HHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHcCC---EEE-EECCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEE
Confidence 56788999999999984 343 333322222 567788899999988677666555 334667777777788766
Q ss_pred ecc
Q 020082 166 NQV 168 (331)
Q Consensus 166 vq~ 168 (331)
+-.
T Consensus 90 ~~~ 92 (276)
T 3ksm_A 90 VDS 92 (276)
T ss_dssp ESS
T ss_pred Eec
Confidence 543
No 168
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=27.55 E-value=30 Score=23.29 Aligned_cols=27 Identities=19% Similarity=0.073 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHh
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRYILD 270 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~~l~ 270 (331)
..-..++.+..+.|+|..++|-+--++
T Consensus 18 ~~~~~l~~~r~~~glsq~elA~~~gis 44 (83)
T 2a6c_A 18 QLLIVLQEHLRNSGLTQFKAAELLGVT 44 (83)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcC
Confidence 344778888888899988887665333
No 169
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=27.52 E-value=1.1e+02 Score=27.55 Aligned_cols=90 Identities=8% Similarity=-0.072 Sum_probs=55.7
Q ss_pred HHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHH-H--cCcccEEecCcccHHHHHHHHHcCCCeeeecccccccccCh
Q 020082 101 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLK-E--EGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP 177 (331)
Q Consensus 101 L~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~-~--~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~~~ 177 (331)
+++| +-++++++-.|-+ . +. +.+..|.+.. . .+..-..|=+.+ .+.+.++++.+ .++++|+..+----..
T Consensus 221 ~~~L--~~~~l~~iEeP~~-~-d~-~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~-a~dii~~d~~~GGite 293 (392)
T 3v5c_A 221 LAAL--SDVNLYWLEAAFH-E-DE-ALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRG-RVDVLQYDIIWPGFTH 293 (392)
T ss_dssp HHHT--TTSCCCEEECSSS-C-CH-HHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTT-SCCEECCBTTTBCHHH
T ss_pred HHhc--ccCCCeEEeCCCC-c-CH-HHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcC-CCcEEEeCCCCCCHHH
Confidence 4455 3467888888865 2 22 3333333321 1 244456666767 67788888755 5788888766310112
Q ss_pred hhhHHHHHHHhCCeEEEccc
Q 020082 178 QQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 178 ~~~~~~~~~~~gi~via~~~ 197 (331)
...+...|+.+|+.++..+.
T Consensus 294 a~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 294 WMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHHHcCCeEEecCC
Confidence 24788999999999987764
No 170
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=27.28 E-value=2.8e+02 Score=23.32 Aligned_cols=84 Identities=7% Similarity=-0.079 Sum_probs=40.3
Q ss_pred hHHHHHHHHhhhhcCCCccchheeeecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHH
Q 020082 52 AEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHL 131 (331)
Q Consensus 52 sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l 131 (331)
+-..+.+.+..+...-.+..++-++ -+++.+..+..+.+.-..-+....+.-..||+|+=+- .+ ++....+
T Consensus 61 ~~~~v~~~l~~lr~~~~~lPiI~T~-Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~------~~--~~~~~~l 131 (258)
T 4h3d_A 61 NIKEVKEVLYELRSYIHDIPLLFTF-RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELF------MG--DEVIDEV 131 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEEC-CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGG------GC--HHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEE-echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhh------cc--HHHHHHH
Confidence 4455666665543210001222222 2333333334455554444454444444899998431 11 3556666
Q ss_pred HHHHHcCcccEEe
Q 020082 132 TDLKEEGKIKTVA 144 (331)
Q Consensus 132 ~~l~~~Gkir~iG 144 (331)
.+..+++.++-|.
T Consensus 132 ~~~a~~~~~kiI~ 144 (258)
T 4h3d_A 132 VNFAHKKEVKVII 144 (258)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHhCCCEEEE
Confidence 6665666666663
No 171
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=27.15 E-value=1.8e+02 Score=26.19 Aligned_cols=68 Identities=7% Similarity=-0.041 Sum_probs=47.4
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
++.+.+++++-.|- ..|=+.++.++++++++.+ .++++|+..+-.-- .....+...|+++|+.++...
T Consensus 240 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 240 AAEWAELAQAAPMPLAGGENIAGVAAFETALAAR-SLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT-CEEEECCCTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred HHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 56677777665553 4455667899999988765 58888887654311 123578999999999987554
No 172
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=26.90 E-value=3.3e+02 Score=24.07 Aligned_cols=97 Identities=11% Similarity=-0.016 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCccc-HHHHHHHHHcCCCeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFD-TERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~-~~~l~~~~~~~~~~~~ 165 (331)
++.+...+-++ .|+.++.+ ++..|-+. +-++.+.+++++-.|--.+ =+.++ ++.++++++.+ .+++
T Consensus 211 ~~~~~a~~~~~-~l~~~~i~-----~iE~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~-~~d~ 278 (382)
T 1rvk_A 211 YSRTDALALGR-GLEKLGFD-----WIEEPMDE-----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAG-ACDI 278 (382)
T ss_dssp CCHHHHHHHHH-HHHTTTCS-----EEECCSCT-----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHHH-HHHhcCCC-----EEeCCCCh-----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcC-CCCE
Confidence 46666655554 56666655 34555332 2356677777665554443 34467 89999999865 5888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
+|+..+-.-- .....+...|+++|+.++..+
T Consensus 279 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 279 LRTGVNDVGGITPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EeeCchhcCCHHHHHHHHHHHHHcCCeEeecC
Confidence 8887654311 123578999999999999883
No 173
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=26.89 E-value=2.6e+02 Score=24.18 Aligned_cols=89 Identities=15% Similarity=0.042 Sum_probs=58.9
Q ss_pred HHHcCCCcccEEEEe-cCCC----CCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeeccccccccc
Q 020082 101 RRRMDVPCLDMLQFH-WWDY----SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM 175 (331)
Q Consensus 101 L~rLg~d~lDl~~lH-~~d~----~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~ 175 (331)
+-.-|-|.||+=--- +|.. ....++.+...++.+++++. -|-|-++.++.++++++.|..+ + +..|..
T Consensus 61 ~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i-I--NdVsg~-- 133 (294)
T 2dqw_A 61 MVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHL-L--NDVTGL-- 133 (294)
T ss_dssp HHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSE-E--ECSSCS--
T ss_pred HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCE-E--EECCCC--
Confidence 344589999996422 2321 12225667888888887643 4778899999999999877432 1 223332
Q ss_pred ChhhhHHHHHHHhCCeEEEccc
Q 020082 176 RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 176 ~~~~~~~~~~~~~gi~via~~~ 197 (331)
.+.++++.+++.|+.++.+..
T Consensus 134 -~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 134 -RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp -CCHHHHHHHHHHTCEEEEECC
T ss_pred -CChHHHHHHHHhCCCEEEEcC
Confidence 234899999999999999864
No 174
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=26.71 E-value=2.2e+02 Score=25.32 Aligned_cols=68 Identities=21% Similarity=0.139 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 128 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 128 ~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
++.+.+|+++-.| -..|=|.++.+.+.++++.+ .++++|+...-.-- .....+...|+++|+.++...
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~-a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h~ 297 (378)
T 4hpn_A 228 LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAG-AVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPHV 297 (378)
T ss_dssp HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTT-CCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCBC
T ss_pred hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcC-CCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeCC
Confidence 4567777766555 35677778899999998865 57888877654311 123578899999999976543
No 175
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.65 E-value=1.6e+02 Score=24.49 Aligned_cols=44 Identities=7% Similarity=0.054 Sum_probs=26.6
Q ss_pred HHHHHHHcCCCeeeeccccccccc---ChhhhHHHHHHHhCCeEEEccc
Q 020082 152 RLRIILENGIPVVSNQVQHSVVDM---RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 152 ~l~~~~~~~~~~~~vq~~~nl~~~---~~~~~~~~~~~~~gi~via~~~ 197 (331)
.++.+.+.| ++.+++....... ..-..+.+.++++|+.+.+..+
T Consensus 22 ~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 68 (290)
T 2qul_A 22 TAKRIAGLG--FDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIG 68 (290)
T ss_dssp HHHHHHHTT--CSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhC--CCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecC
Confidence 444444444 6666665432111 1225788999999999988653
No 176
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=26.55 E-value=2e+02 Score=25.17 Aligned_cols=107 Identities=10% Similarity=-0.089 Sum_probs=59.9
Q ss_pred HHHHHhhhhcCCCccchheeeecccccCCCCCCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHH
Q 020082 56 YGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLK 135 (331)
Q Consensus 56 lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~ 135 (331)
+...++.+..... .+++++.+.+........-+++.+..+...-++.-+.|.||+=.=+. .. .....++|..|+
T Consensus 63 ~~~~I~~~q~~G~-kVllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~---~~--~d~~~~aL~~l~ 136 (311)
T 2dsk_A 63 FVDEVRELREIGG-EVIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAG---ID--ADKLADALLIVQ 136 (311)
T ss_dssp GHHHHHHHHTTTC-EEEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSC---CC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC-eEEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccCC---cc--HHHHHHHHHHHH
Confidence 3445555444433 66777665542110001237888888899999999999999743222 11 246777888888
Q ss_pred HcC--cccEE--ecC--c---ccHHHHHHHHHcCCCeeeecc
Q 020082 136 EEG--KIKTV--ALT--N---FDTERLRIILENGIPVVSNQV 168 (331)
Q Consensus 136 ~~G--kir~i--GvS--~---~~~~~l~~~~~~~~~~~~vq~ 168 (331)
+++ +.-.+ .+. . ...+.|..+.+.+..++.+.+
T Consensus 137 ~~~p~~~vs~TL~~~p~gl~~~g~~~l~~a~~~g~~ld~Vni 178 (311)
T 2dsk_A 137 RERPWVKFSFTLPSDPGIGLAGGYGIIETMAKKGVRVDRVNP 178 (311)
T ss_dssp HHSTTCEEEEEEEEETTTEESTHHHHHHHHHHHTCCCCEEEE
T ss_pred hhCCCcEEEEEeccCCCCCCcchHHHHHHHHHcCccccEEEE
Confidence 764 32232 122 1 122456666655655555443
No 177
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=26.51 E-value=3.6e+02 Score=24.36 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCccc---------HHHHHHHH
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFD---------TERLRIIL 157 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~---------~~~l~~~~ 157 (331)
..+.+.+.+.++...+..|+.. +.+..=++.....+.+.+.++.+++.+.++.|.+++.. .+.++.+.
T Consensus 144 ~ls~eei~~~i~~i~~~~gi~~---V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~ 220 (416)
T 2a5h_A 144 SMPMERIDKAIDYIRNTPQVRD---VLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQRITPELVNMLK 220 (416)
T ss_dssp BCCHHHHHHHHHHHHTCTTCCE---EEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGGCCHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHhcCCCcE---EEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEecccccccccCCHHHHHHHH
Confidence 3577888887776554455433 45555444332123466677777777666677665533 45555554
Q ss_pred HcCCCeeeeccccccccc--ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 158 ENGIPVVSNQVQHSVVDM--RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 158 ~~~~~~~~vq~~~nl~~~--~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
+. ....+.+..+-... ..-.+.+..+++.|+.+....++..|
T Consensus 221 ~~--~~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~G 264 (416)
T 2a5h_A 221 KY--HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRG 264 (416)
T ss_dssp GG--CSEEEEECCCSGGGCCHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred hc--CcEEEEEecCCHHHHhHHHHHHHHHHHHcCCEEEEEEEEECC
Confidence 43 21122222221100 11135677778889987777777555
No 178
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=26.27 E-value=2.8e+02 Score=25.14 Aligned_cols=68 Identities=15% Similarity=0.096 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCcc---cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 128 LNHLTDLKEEGKI---KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 128 ~~~l~~l~~~Gki---r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
++.+.+|+++-.+ -..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+.+|+.++..+
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~-a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMG-CCDIIQPDVGWCGGVTELLKISALADAHNALVVPHG 321 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcC-CCCeEecChhhcCCccHHHHHHHHHHHcCCEEEecC
Confidence 4556666665443 25666778888888888755 57888877664311 123578999999999998655
No 179
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=25.81 E-value=2.9e+02 Score=24.32 Aligned_cols=102 Identities=17% Similarity=0.134 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHH-HHHcCcccEEecCcccHHHHHHHHHcCCCeeeeccccccc
Q 020082 95 ESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTD-LKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVV 173 (331)
Q Consensus 95 ~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~-l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~ 173 (331)
.++...++.+ ...=|-+++..+.+ ..+...+.. ++..| ++..-+...+.+.++++++...+..++....|+.
T Consensus 85 ~ai~~~~~~~-~~~gd~vl~~~~~y-----~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~npt 157 (389)
T 3acz_A 85 GAISSSTLAF-LQKGDHLIAGDTLY-----GCTVSLFTHWLPRFG-IEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPT 157 (389)
T ss_dssp HHHHHHHTTT-CCTTCEEEEESSCC-----HHHHHHHHHHHHHTT-CEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHH-hCCCCEEEEeCCCc-----hHHHHHHHHHHHHcC-CEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCC
Confidence 4445555544 22235666666543 234444444 23334 2333333356777777665333455555555653
Q ss_pred c-cChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 174 D-MRPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 174 ~-~~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
- ..+-+++.+.|+++|+-++.-.+.+.+.+
T Consensus 158 G~~~~l~~i~~~~~~~~~~livD~~~~~~~~ 188 (389)
T 3acz_A 158 CKVSDIKGIAVVCHERGARLVVDATFTSPCF 188 (389)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEEECTTTCTTT
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 2 12346899999999999999888876654
No 180
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=25.74 E-value=1.4e+02 Score=26.58 Aligned_cols=98 Identities=11% Similarity=0.022 Sum_probs=61.0
Q ss_pred CC-HHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeee
Q 020082 88 MT-SSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~-~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~ 165 (331)
++ .+...+-+ +.|+.++. .++..|-+. +-++.+.+++++-.|- ..|=+-++.+.++++++.+ .+++
T Consensus 204 ~~d~~~A~~~~-~~l~~~~i-----~~iEqP~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-~~d~ 271 (374)
T 3sjn_A 204 WHTCGHSAMMA-KRLEEFNL-----NWIEEPVLA-----DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKS-NADI 271 (374)
T ss_dssp TCSHHHHHHHH-HHSGGGCC-----SEEECSSCT-----TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHH-CCSE
T ss_pred CCCHHHHHHHH-HHhhhcCc-----eEEECCCCc-----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcC-CCCE
Confidence 35 55433332 23455554 445555332 1356677777765553 3444557888999888754 5788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
+|+..+-.-- .....+...|+++|+.++..+.
T Consensus 272 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 272 VQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp ECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 8887665311 1235789999999999998876
No 181
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=25.73 E-value=3.6e+02 Score=24.07 Aligned_cols=97 Identities=6% Similarity=-0.063 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHH-HcCcccEE-ecCcccHHHHHHHHHcCCCeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLK-EEGKIKTV-ALTNFDTERLRIILENGIPVVS 165 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~-~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~ 165 (331)
++.+...+-+ +.|+.++.++ +..|-+. +-++.+.+++ ++-.|--. |=+.++.+.++++++.+ .+++
T Consensus 206 ~~~~~A~~~~-~~l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~-~~d~ 273 (389)
T 3ozy_A 206 LGRHDALAML-RILDEAGCYW-----FEEPLSI-----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRND-AIDV 273 (389)
T ss_dssp CCHHHHHHHH-HHHHHTTCSE-----EESCSCT-----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTT-CCSE
T ss_pred cCHHHHHHHH-HHHHhcCCCE-----EECCCCc-----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcC-CCCE
Confidence 4666544433 3467776554 4555332 2356677887 66555433 33457788999998865 5888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEEcc
Q 020082 166 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 166 vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~ 196 (331)
+|+..+..-- .....+...|+++|+.++..+
T Consensus 274 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 274 LQADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 8887665411 123578999999999998774
No 182
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=25.68 E-value=1.4e+02 Score=26.77 Aligned_cols=73 Identities=11% Similarity=0.008 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeecccccccc-cChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~-~~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.+++++-.| -..|=|.++.+.++++++.+ .++++|+..+-.- -.....+...|+++|+.++..+.+.++
T Consensus 233 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 233 NAALVRLSQQIETAILADEAVATAYDGYQLAQQG-FTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 4555556554333 34455567777787777754 4677777654321 122357889999999999887766544
No 183
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=25.64 E-value=2.4e+02 Score=25.20 Aligned_cols=98 Identities=13% Similarity=-0.045 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEe-cCcccHHHHHHHHHcC---CCe
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENG---IPV 163 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~---~~~ 163 (331)
++.+...+-++. |+.++.+ ++..|-+. +-++.+.+++++-.|--.+ =+.++++.++++++.+ ..+
T Consensus 221 ~~~~~a~~~~~~-l~~~~i~-----~iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~ 289 (392)
T 1tzz_A 221 FNLETGIAYAKM-LRDYPLF-----WYEEVGDP-----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDR 289 (392)
T ss_dssp CCHHHHHHHHHH-HTTSCCS-----EEECCSCT-----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTT
T ss_pred CCHHHHHHHHHH-HHHcCCC-----eecCCCCh-----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCC
Confidence 466655554444 5655544 44555321 2466777777765564443 3446889999988754 147
Q ss_pred eeeccccccccc-ChhhhHHHHHHHhCCe---EEEcc
Q 020082 164 VSNQVQHSVVDM-RPQQKMAELCQLTGVK---LITYG 196 (331)
Q Consensus 164 ~~vq~~~nl~~~-~~~~~~~~~~~~~gi~---via~~ 196 (331)
+++|+..+..-- .....+...|+++|+. ++..+
T Consensus 290 d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~ 326 (392)
T 1tzz_A 290 DWLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPHG 326 (392)
T ss_dssp CEECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCSC
T ss_pred cEEEECccccCCHHHHHHHHHHHHHCCCCCceEeecH
Confidence 888887664311 1235789999999999 88773
No 184
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=25.19 E-value=2.1e+02 Score=23.29 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=54.9
Q ss_pred EEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCC--Ceeeeccccccc---ccChhhhHHHHH
Q 020082 111 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGI--PVVSNQVQHSVV---DMRPQQKMAELC 185 (331)
Q Consensus 111 l~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~--~~~~vq~~~nl~---~~~~~~~~~~~~ 185 (331)
++|+..|.... .+++++...+-.++.-|++|=|.+.+-+...++.+ .. ++.+|--.+..- ..+...+..+..
T Consensus 25 i~YF~~~G~eN--T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e-~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L 101 (206)
T 1t57_A 25 ICYFEEPGKEN--TERVLELVGERADQLGIRNFVVASVSGETALRLSE-MVEGNIVSVTHHAGFREKGQLELEDEARDAL 101 (206)
T ss_dssp EEEESSCSGGG--HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHT-TCCSEEEEECCCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHH-HccCCEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 56676665443 35666655554455559999988877777666665 22 444444433321 122346899999
Q ss_pred HHhCCeEEEccccccc
Q 020082 186 QLTGVKLITYGTVMGG 201 (331)
Q Consensus 186 ~~~gi~via~~~l~~G 201 (331)
++.|+.++...=+..|
T Consensus 102 ~~~G~~V~t~tH~lsG 117 (206)
T 1t57_A 102 LERGVNVYAGSHALSG 117 (206)
T ss_dssp HHHTCEEECCSCTTTT
T ss_pred HhCCCEEEEeeccccc
Confidence 9999999876554444
No 185
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=25.15 E-value=65 Score=23.89 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=22.4
Q ss_pred HHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEE
Q 020082 153 LRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 194 (331)
Q Consensus 153 l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via 194 (331)
++++.+.|++..+.|..+ .++++.+.|+++||.++.
T Consensus 75 v~e~~~~g~k~v~~~~G~------~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 75 YNYILSLKPKRVIFNPGT------ENEELEEILSENGIEPVI 110 (122)
T ss_dssp HHHHHHHCCSEEEECTTC------CCHHHHHHHHHTTCEEEE
T ss_pred HHHHHhcCCCEEEECCCC------ChHHHHHHHHHcCCeEEC
Confidence 444444455533333322 135899999999999985
No 186
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=25.02 E-value=53 Score=21.70 Aligned_cols=53 Identities=21% Similarity=0.130 Sum_probs=26.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcC
Q 020082 246 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 298 (331)
Q Consensus 246 ~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~ 298 (331)
.+.++.+..+.|+|..++|-+--.++..|+-..-|-+..+.+.+...+++++.
T Consensus 14 ~~~l~~~r~~~gltq~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ia~~l~v 66 (80)
T 3kz3_A 14 KAIWEKKKNELGLSYESVADKMGMGQSAVAALFNGINALNAYNAALLAKILKV 66 (80)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCC
Confidence 35566666667777766665544333333332333333225555555555554
No 187
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=25.01 E-value=26 Score=22.84 Aligned_cols=53 Identities=25% Similarity=0.132 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhc
Q 020082 245 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 297 (331)
Q Consensus 245 ~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~ 297 (331)
....++.+-.+.|+|..++|-+--++...+.-..-|-+..+.+.+...+.+++
T Consensus 11 ~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~la~~l~ 63 (77)
T 2b5a_A 11 FGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALD 63 (77)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 34667777777788877777554333222222222322222455555555443
No 188
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=24.94 E-value=1.5e+02 Score=24.78 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=35.5
Q ss_pred HHHHHHHHcCcccEEecCcc----cHHHHHHHHH-cCCCeeeeccc--ccccccCh---------hhhHHHHHHHhCCeE
Q 020082 129 NHLTDLKEEGKIKTVALTNF----DTERLRIILE-NGIPVVSNQVQ--HSVVDMRP---------QQKMAELCQLTGVKL 192 (331)
Q Consensus 129 ~~l~~l~~~Gkir~iGvS~~----~~~~l~~~~~-~~~~~~~vq~~--~nl~~~~~---------~~~~~~~~~~~gi~v 192 (331)
+.++.+++.| +..|-+... ....++++++ .|+.+.++... .|+....+ -+..++.|++.|+..
T Consensus 42 ~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~ 120 (287)
T 3kws_A 42 EKLDFMEKLG-VVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTG 120 (287)
T ss_dssp HHHHHHHHTT-CCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcC-CCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 3455555555 355655543 2445555554 35555444333 23322222 135777788888888
Q ss_pred EEccc
Q 020082 193 ITYGT 197 (331)
Q Consensus 193 ia~~~ 197 (331)
+...+
T Consensus 121 v~~~~ 125 (287)
T 3kws_A 121 VIIVP 125 (287)
T ss_dssp EEECS
T ss_pred EEEec
Confidence 76654
No 189
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=24.90 E-value=2.2e+02 Score=26.81 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEEecCCCCCc---hHHHHHHHHHHHHHcCc
Q 020082 90 SSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNP---GYLDALNHLTDLKEEGK 139 (331)
Q Consensus 90 ~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~---~~~e~~~~l~~l~~~Gk 139 (331)
.+.|++.+++-.++.|+|.+=++..-+-....+ ...+++++|++..+++.
T Consensus 220 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~l~~ai~~~~ 272 (533)
T 1p1j_A 220 LQRIRRDIQNFKEENALDKVIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH 272 (533)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCcCccCCCCCccccccCHHHHHHHHhcCC
Confidence 567888888988999988755554444322221 12347788888777765
No 190
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=24.88 E-value=1.8e+02 Score=26.20 Aligned_cols=70 Identities=16% Similarity=0.230 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+.+||.++..++.
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 241 TEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANR-RIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp GGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTT-CCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred HHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcC-CCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 45567777665553 3444567889999988865 57888887665311 12357899999999999888763
No 191
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=24.88 E-value=2.7e+02 Score=22.42 Aligned_cols=138 Identities=9% Similarity=0.049 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHhhhcCCccEEECCCCchHHHHHHHHhhhhcCCCccchheeeecccccCCCCCCCHHHHHHHHHHHHHHc
Q 020082 25 CHASLRRCRSHHLRHGRSLSFDFVDGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRM 104 (331)
Q Consensus 25 ~~~~l~~al~~~~~~GGin~~DTA~g~sE~~lG~~l~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~SL~rL 104 (331)
..+.++.|-+. |+. +-+-|.++...+ -..++..+ + .+-+ .+.. ..- .+++.+.+. +.+.
T Consensus 16 ~~e~~~~A~~~-~~~--i~itdH~~~~~~---~~~~~~l~-~---~~~I--~GvE-i~~----~~~~~l~~~----~~~~ 74 (212)
T 1v77_A 16 DKEAYELAKEW-FDE--VVVSIKFNEEVD---KEKLREAR-K---EYGK--VAIL-LSN----PKPSLVRDT----VQKF 74 (212)
T ss_dssp SHHHHHHHHHH-CSE--EEEEEEESSCCC---HHHHHHHH-H---HHSC--EEEE-EES----CCHHHHHHH----HHHC
T ss_pred HHHHHHHHHHH-hcE--EEEeeccCcccc---hhhHHHHH-h---cCCe--eEEE-Eec----CCHHHHHHH----HHhc
Confidence 44677888777 764 788888772111 11122221 1 1111 1111 111 134434433 3332
Q ss_pred CCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcc-------cHHHHHHHHHcCCCeeeeccccccc---c
Q 020082 105 DVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNF-------DTERLRIILENGIPVVSNQVQHSVV---D 174 (331)
Q Consensus 105 g~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~-------~~~~l~~~~~~~~~~~~vq~~~nl~---~ 174 (331)
. +|+..+|.-+ . +....+.+. .|.-||.-.. +...++.+.+.++.+..+-..+.-. .
T Consensus 75 r---~di~~v~~~~-----~----~~n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~~~ 141 (212)
T 1v77_A 75 K---SYLIYVESND-----L----RVIRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYE 141 (212)
T ss_dssp S---SSEEEEECSC-----H----HHHHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHH
T ss_pred C---cEEEEEEeCC-----H----HHHHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCcch
Confidence 2 8999999763 1 223346667 8888886542 3455566666776666555442100 1
Q ss_pred c----ChhhhHHHHHHHhCCeEEEcc
Q 020082 175 M----RPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 175 ~----~~~~~~~~~~~~~gi~via~~ 196 (331)
| ..-..++..|++.|+.++.-|
T Consensus 142 R~~~~~~~~~il~l~k~~g~~ivisS 167 (212)
T 1v77_A 142 RANLLRFMMKAWKLVEKYKVRRFLTS 167 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 1 112378999999999888654
No 192
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=24.55 E-value=3.7e+02 Score=23.77 Aligned_cols=90 Identities=4% Similarity=-0.092 Sum_probs=59.2
Q ss_pred HHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec-CcccHHHHHHHHHcCCCeeeeccccccccc-Ch
Q 020082 100 SRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSNQVQHSVVDM-RP 177 (331)
Q Consensus 100 SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~ 177 (331)
-+++|. .++ ++-.|-+ -++.+.+++++-.|--++- +.++++.++++++.+ .++++|+..+..-. ..
T Consensus 209 ~~~~l~---~~i-~iEqP~~-------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGi~~ 276 (378)
T 2qdd_A 209 VLNSVR---ARD-WIEQPCQ-------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRG-ACEGVKIKPNRVGGLTR 276 (378)
T ss_dssp HHTSCC---CCC-EEECCSS-------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHH
T ss_pred HHHHhC---CCc-EEEcCCC-------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhC-CCCEEEecccccCCHHH
Confidence 355553 566 6765532 4666777777655644443 346888999988765 57888887664311 12
Q ss_pred hhhHHHHHHHhCCeEEEccccccc
Q 020082 178 QQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 178 ~~~~~~~~~~~gi~via~~~l~~G 201 (331)
...+...|+++|+.++..+.+..+
T Consensus 277 ~~~i~~~A~~~g~~~~~~~~~es~ 300 (378)
T 2qdd_A 277 ARQIRDFGVSVGWQMHIEDVGGTA 300 (378)
T ss_dssp HHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHHcCCeEEecCCCCcH
Confidence 357899999999999988654443
No 193
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=24.33 E-value=3.2e+02 Score=23.03 Aligned_cols=25 Identities=8% Similarity=-0.011 Sum_probs=18.9
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccE
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDM 111 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl 111 (331)
..+.+.-.+-++..++.++.||||+
T Consensus 105 ~~~~~~y~~ll~~~~~~~~~dyIDV 129 (259)
T 3l9c_A 105 SLSNEDYLAIIRDIAALYQPDYIDF 129 (259)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3466666666777777799999998
No 194
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=24.31 E-value=3.8e+02 Score=23.88 Aligned_cols=97 Identities=10% Similarity=0.066 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcC-cccEEecCcccHHHHHHHHH----cCCC
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTNFDTERLRIILE----NGIP 162 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~G-kir~iGvS~~~~~~l~~~~~----~~~~ 162 (331)
++.+...+ +-+.|.++|+++|..-+ |.. . +.-++++.++.+.. .++..+++.-....++++.+ .+.+
T Consensus 31 ~~~~~Kl~-ia~~L~~~Gv~~IE~g~---p~~-~---~~d~e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~al~~ag~~ 102 (370)
T 3rmj_A 31 MTKEEKIR-VARQLEKLGVDIIEAGF---AAA-S---PGDFEAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKK 102 (370)
T ss_dssp CCHHHHHH-HHHHHHHHTCSEEEEEE---GGG-C---HHHHHHHHHHHTTCSSSEEEEEEESSHHHHHHHHHHHTTSSSE
T ss_pred cCHHHHHH-HHHHHHHcCCCEEEEeC---CCC-C---HHHHHHHHHHHHhCCCCeEEEEecCCHHHHHHHHHHHhhCCCC
Confidence 45554444 44559999999999864 321 1 23445555555543 24455555445666776665 3332
Q ss_pred eeeec-------ccccccccChh------hhHHHHHHHhCCeEE
Q 020082 163 VVSNQ-------VQHSVVDMRPQ------QKMAELCQLTGVKLI 193 (331)
Q Consensus 163 ~~~vq-------~~~nl~~~~~~------~~~~~~~~~~gi~vi 193 (331)
...+- +.+|+ ....+ .+.+++|+++|..+.
T Consensus 103 ~v~if~~~Sd~h~~~~l-~~s~~e~l~~~~~~v~~a~~~g~~v~ 145 (370)
T 3rmj_A 103 RIHTFIATSPIHMEYKL-KMKPKQVIEAAVKAVKIAREYTDDVE 145 (370)
T ss_dssp EEEEEEECSHHHHHHTT-CCCHHHHHHHHHHHHHHHTTTCSCEE
T ss_pred EEEEEecCcHHHHHHHh-CCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 22111 12222 12211 257788888888654
No 195
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=24.31 E-value=1.4e+02 Score=25.67 Aligned_cols=65 Identities=11% Similarity=0.028 Sum_probs=39.3
Q ss_pred HHHHcCcccEEecCcccHHHHHHHHHcC--CCeeeecc-------------cc-------cccccChhhhHHHHHHHhCC
Q 020082 133 DLKEEGKIKTVALTNFDTERLRIILENG--IPVVSNQV-------------QH-------SVVDMRPQQKMAELCQLTGV 190 (331)
Q Consensus 133 ~l~~~Gkir~iGvS~~~~~~l~~~~~~~--~~~~~vq~-------------~~-------nl~~~~~~~~~~~~~~~~gi 190 (331)
.+++.|....+=+++|+.+.+.++.+.. +++..... +| ++-......++++.|+++|+
T Consensus 150 ~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G~ 229 (292)
T 3mz2_A 150 LITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERGV 229 (292)
T ss_dssp HHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTTB
T ss_pred HHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCCC
Confidence 3445566677788888888888777532 22222110 00 10001123579999999999
Q ss_pred eEEEccc
Q 020082 191 KLITYGT 197 (331)
Q Consensus 191 ~via~~~ 197 (331)
.|++|.+
T Consensus 230 ~V~vWTv 236 (292)
T 3mz2_A 230 MCMISTA 236 (292)
T ss_dssp CEEEECT
T ss_pred EEEEEeC
Confidence 9999964
No 196
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=24.29 E-value=4.2e+02 Score=24.37 Aligned_cols=96 Identities=14% Similarity=0.060 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-C-cccEEecCc-c-cHHHHHHHHHcCCCee
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-G-KIKTVALTN-F-DTERLRIILENGIPVV 164 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-G-kir~iGvS~-~-~~~~l~~~~~~~~~~~ 164 (331)
+++...+-+++.|+.+ ++++|-.|-+... |+.+.+|.+. | .|--+|=-. + +++.++++++.+ .++
T Consensus 290 t~~eai~~~~~lle~y-----~i~~IEdPl~~dD-----~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~-a~d 358 (449)
T 3uj2_A 290 ASEELVAHWKSLCERY-----PIVSIEDGLDEED-----WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKER-CGN 358 (449)
T ss_dssp EHHHHHHHHHHHHHHS-----CEEEEESCSCTTC-----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTT-CCS
T ss_pred CHHHHHHHHHHHHHhc-----CceEEECCCCcch-----HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcC-CCC
Confidence 5666665555556654 5888888754333 3444444443 2 454445333 3 599999998865 477
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 165 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 165 ~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
++|+..|-.-- .....+...|+++|+.++.-
T Consensus 359 ~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~ 390 (449)
T 3uj2_A 359 SILIKLNQIGTVSETLEAIKMAHKAGYTAVVS 390 (449)
T ss_dssp EEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 78877664321 12357899999999995543
No 197
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=24.25 E-value=3.5e+02 Score=23.49 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=58.7
Q ss_pred HHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeecccccccc-
Q 020082 96 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVD- 174 (331)
Q Consensus 96 ~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~- 174 (331)
++...++.+ ...=|-+++..+.+ ..+...+..+.+.-.++.+-+...+.+.++++++......++....|+.-
T Consensus 79 a~~~~~~~~-~~~g~~vl~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 152 (386)
T 1cs1_A 79 AIHLVTTVF-LKPGDLLVAPHDCY-----GGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLR 152 (386)
T ss_dssp HHHHHHHHH-CCTTCEEEEETTCC-----HHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCC
T ss_pred HHHHHHHHH-hCCCCEEEEecCCc-----HhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCc
Confidence 444444443 12235666666543 22444444432222223333333477888888765455666666666531
Q ss_pred cChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 175 MRPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 175 ~~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
..+-+++.+.|+++|+-++.-.+.+.+.+
T Consensus 153 ~~~l~~i~~l~~~~~~~li~De~~~~~~~ 181 (386)
T 1cs1_A 153 VVDIAKICHLAREVGAVSVVDNTFLSPAL 181 (386)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTT
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 22346899999999999999888876654
No 198
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=24.11 E-value=2.9e+02 Score=22.51 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHhC-CCceeEeecccCCcHhHHHHhhchhc
Q 020082 258 VSIPVVAVRYILDQ-PAVAGSMIGVRLGLAEHIQDTNAIFM 297 (331)
Q Consensus 258 ~s~aq~Al~~~l~~-~~v~~~i~G~~~~~~~~l~e~~~a~~ 297 (331)
.|-.++||+|++.+ +.-..++.|+.-...+|.-.|+..+-
T Consensus 73 ~TD~e~Al~~a~~~~~~~~I~i~Ga~GGR~DH~lani~lL~ 113 (218)
T 3ihk_A 73 DTDTELALKTIFDCFGRVEIIVFGAFGGRIDHMLSNIFLPS 113 (218)
T ss_dssp SCHHHHHHHHHHHHTSSCEEEEESCSSSCHHHHHHHHTGGG
T ss_pred CCHHHHHHHHHHHhCCCCEEEEECCCCCchhhHHHHHHHHH
Confidence 46678999999987 55667788887666888888887664
No 199
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=23.88 E-value=1.1e+02 Score=21.85 Aligned_cols=26 Identities=27% Similarity=0.439 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRYIL 269 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~~l 269 (331)
+..+.|+++|++.|+|+++++=..+.
T Consensus 8 slY~~LkelAe~EGvSvSav~RkLL~ 33 (106)
T 4hv0_A 8 EVYEFLKKKAKEEGTSVPAVIRKILK 33 (106)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44589999999999999998877665
No 200
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=23.85 E-value=2.5e+02 Score=24.10 Aligned_cols=44 Identities=9% Similarity=-0.041 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcc
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI 140 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki 140 (331)
+.+.+.+.++..++ .-+.+|++++..|... -.+...++.+.||=
T Consensus 55 ~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~~------H~~~~~~al~aGkh 98 (312)
T 3o9z_A 55 EPEAFEAYLEDLRD--RGEGVDYLSIASPNHL------HYPQIRMALRLGAN 98 (312)
T ss_dssp CHHHHHHHHHHHHH--TTCCCSEEEECSCGGG------HHHHHHHHHHTTCE
T ss_pred CHHHHHHHhhhhcc--cCCCCcEEEECCCchh------hHHHHHHHHHCCCe
Confidence 56666655544333 4567999999988632 23334555567863
No 201
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=23.85 E-value=4.1e+02 Score=24.05 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEE-ecC-cccHHHHHHHHHcCCCeeee
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALT-NFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~i-GvS-~~~~~~l~~~~~~~~~~~~v 166 (331)
+++...+-+.+.|+. ++++++-.|-+... ++.+.+|.++-.|--. |=+ ..+.+.++++++.+ .++++
T Consensus 268 ~~~~ai~~~~~~l~~-----~~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~-a~d~i 336 (427)
T 2pa6_A 268 TREELLDYYKALVDE-----YPIVSIEDPFHEED-----FEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMK-AANAL 336 (427)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSCTTC-----HHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHT-CCSEE
T ss_pred CHHHHHHHHHHHHhh-----CCCcEEEcCCChhh-----HHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhC-CCCEE
Confidence 566655555556665 45888888854332 4556666666555333 233 23489999988765 47788
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEE
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLIT 194 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via 194 (331)
|+..+-.-- .....+...|+++|+.++.
T Consensus 337 ~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 337 LLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp EECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred EEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 877654311 1235789999999999876
No 202
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=23.73 E-value=76 Score=24.57 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=17.2
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcC
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEG 138 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~G 138 (331)
+|.++++..|.-.-...+++..++.|.+.|
T Consensus 76 ~d~lvv~~ldRl~R~~~~~~~~~~~l~~~g 105 (167)
T 3guv_A 76 VSFVLVFKLSRFARNAADVLSTLQIMQDYG 105 (167)
T ss_dssp CSEEEESCGGGTCSSHHHHHHHHHHHHHTT
T ss_pred ccEEEEEeCchhcCCHHHHHHHHHHHHHCC
Confidence 666666666544333455666666665554
No 203
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=23.73 E-value=26 Score=23.37 Aligned_cols=54 Identities=20% Similarity=0.018 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhc
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 297 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~ 297 (331)
.+-..++.+-.+.|+|..++|-+--++...+.-..-|-+..+.+.+...+++++
T Consensus 14 ~~~~~l~~~R~~~gltq~elA~~~gis~~~is~~e~g~~~~~~~~l~~l~~~l~ 67 (83)
T 3f6w_A 14 ALLDLLLEARSAAGITQKELAARLGRPQSFVSKTENAERRLDVIEFMDFCRGIG 67 (83)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHcC
Confidence 344677777778888888877665433333322223332223555555555543
No 204
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=23.72 E-value=3.3e+02 Score=22.96 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=56.0
Q ss_pred HHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHH-HHHHHHHcCcccEEecC-------cccHHH-HHHHHHcCCCeee
Q 020082 95 ESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALN-HLTDLKEEGKIKTVALT-------NFDTER-LRIILENGIPVVS 165 (331)
Q Consensus 95 ~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~-~l~~l~~~Gkir~iGvS-------~~~~~~-l~~~~~~~~~~~~ 165 (331)
+.+++.|+-.| +|||++-+-|-.....+ +++++ .++-+++.|---+.|=. .-..++ ++++.+.| |++
T Consensus 26 ~~~~d~Le~~g-~yID~lKfg~Gt~~l~~-~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lG--f~~ 101 (251)
T 1qwg_A 26 KFVEDYLKVCG-DYIDFVKFGWGTSAVID-RDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLG--FEA 101 (251)
T ss_dssp HHHHHHHHHHG-GGCSEEEECTTGGGGSC-HHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHT--CCE
T ss_pred HHHHHHHHHhh-hhcceEEecCceeeecC-HHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcC--CCE
Confidence 45667777888 89999999987654432 34444 44444555554555532 112222 33333334 666
Q ss_pred ecccccccccChh--hhHHHHHHHhCCeEEE
Q 020082 166 NQVQHSVVDMRPQ--QKMAELCQLTGVKLIT 194 (331)
Q Consensus 166 vq~~~nl~~~~~~--~~~~~~~~~~gi~via 194 (331)
+.+.=.-++-..+ ..++..+++.|..++.
T Consensus 102 iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 102 VEISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 6665444443333 3688889999988853
No 205
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=23.58 E-value=3.7e+02 Score=23.50 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=57.2
Q ss_pred HHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHH-HHcC-cccEEecCcccHHHHHHHHHcCCCeeeecccccc
Q 020082 95 ESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDL-KEEG-KIKTVALTNFDTERLRIILENGIPVVSNQVQHSV 172 (331)
Q Consensus 95 ~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l-~~~G-kir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl 172 (331)
.++...++.+ +..=|-+++..+.+. .....+..+ ...| ++..+-+ .+.+.+++++....+..++....|+
T Consensus 90 ~a~~~~l~~~-~~~gd~vi~~~~~~~-----~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~i~~~~~~v~~~~~~np 161 (398)
T 2rfv_A 90 SAITTTLLTL-CQQGDHIVSASAIYG-----CTHAFLSHSMPKFGINVRFVDA--AKPEEIRAAMRPETKVVYIETPANP 161 (398)
T ss_dssp HHHHHHHHHH-CCTTCEEEEESSSCH-----HHHHHHHTHHHHTTCEEEEECT--TSHHHHHHHCCTTEEEEEEESSBTT
T ss_pred HHHHHHHHHH-hCCCCEEEEcCCCcc-----cHHHHHHHHHHHcCCEEEEeCC--CCHHHHHHhcCCCCeEEEEECCCCC
Confidence 3444444443 122367777766532 233333222 3333 3444433 3677777776533345555555665
Q ss_pred cc-cChhhhHHHHHHHhCCeEEEccccccccc
Q 020082 173 VD-MRPQQKMAELCQLTGVKLITYGTVMGGLL 203 (331)
Q Consensus 173 ~~-~~~~~~~~~~~~~~gi~via~~~l~~G~L 203 (331)
.- ..+-+++.+.|+++|+-++.=.+.+.|.+
T Consensus 162 tG~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 193 (398)
T 2rfv_A 162 TLSLVDIETVAGIAHQQGALLVVDNTFMSPYC 193 (398)
T ss_dssp TTBCCCHHHHHHHHHHTTCEEEEECTTTCTTT
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 32 12346899999999999999888776654
No 206
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=23.53 E-value=1.2e+02 Score=24.74 Aligned_cols=74 Identities=8% Similarity=-0.034 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeeec
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~vq 167 (331)
+++.++. ...+|.||+=+.+. -+.+..... +....|.... ...+..+||. |.+++.+.++++. ..++++|
T Consensus 10 ~~eda~~-----a~~~GaD~iGfif~-~~SpR~V~~-~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 80 (203)
T 1v5x_A 10 RLEDALL-----AEALGAFALGFVLA-PGSRRRIAP-EAARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEE-ARLQVAQ 80 (203)
T ss_dssp CHHHHHH-----HHHHTCSEEEEECC-TTCTTBCCH-HHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH-TTCSEEE
T ss_pred cHHHHHH-----HHHcCCCEEEEEec-CCCCCcCCH-HHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 3455544 34679999888742 222222212 3444443322 2458899987 5678888888774 4799999
Q ss_pred cccc
Q 020082 168 VQHS 171 (331)
Q Consensus 168 ~~~n 171 (331)
++-+
T Consensus 81 LHG~ 84 (203)
T 1v5x_A 81 LHGE 84 (203)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 8744
No 207
>3hou_D DNA-directed RNA polymerase II subunit RPB4; RNA polymerase II, metal-binding, transcription bubble; HET: BRU; 3.20A {Saccharomyces cerevisiae} PDB: 1nt9_D 1y1w_D 1y1y_D 1y77_D* 2b63_D* 2b8k_D 2ja5_D* 2ja6_D* 2ja7_D* 2ja8_D* 2r7z_D 2r92_D 2r93_D 1y1v_D* 3fki_D 3h3v_E 2vum_D* 3hov_D* 3how_D* 3hox_D* ...
Probab=23.45 E-value=3.1e+02 Score=22.54 Aligned_cols=78 Identities=9% Similarity=0.074 Sum_probs=53.7
Q ss_pred HHHHhhhhccCCchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCCCCHHHHH
Q 020082 227 QKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVN 306 (331)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~L~~~~~~ 306 (331)
.+...+..+|.... ....+..++++....++.+.++|.--. +.+.+ +++++..+..+...++++++.
T Consensus 142 ~KTLdYl~rFSKfk-n~EAv~aVrELL~~~gLheFEiAqLAN----------LcPeT--aDEARALIPSL~~k~sDEeLq 208 (221)
T 3hou_D 142 KNTMQYLTNFSRFR-DQETVGAVIQLLKSTGLHPFEVAQLGS----------LACDT--ADEAKTLIPSLNNKISDDELE 208 (221)
T ss_dssp HHHHHHHHHSCSCC-CHHHHHHHHHHHTTSCCCHHHHHHHHH----------SCCCS--HHHHHHHCTTCTTSSCHHHHH
T ss_pred HHHHHHHHHhcCCC-cHHHHHHHHHHHHhcCCChHHhheecc----------cCCCC--HHHHHHHHHhhcccCCHHHHH
Confidence 33334444454332 335567788887778888877664222 33456 999999999998889999999
Q ss_pred HHHHHhhcCCC
Q 020082 307 SIQEVTKKGKD 317 (331)
Q Consensus 307 ~l~~~~~~~~~ 317 (331)
.|-..+..++.
T Consensus 209 eILdeLskyR~ 219 (221)
T 3hou_D 209 RILKELSNLET 219 (221)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhhc
Confidence 99888877653
No 208
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=23.38 E-value=1.2e+02 Score=23.27 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=34.4
Q ss_pred EEecC-cccHHHHHHHHH-----cCCCeeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 142 TVALT-NFDTERLRIILE-----NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 142 ~iGvS-~~~~~~l~~~~~-----~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
-||+. +.+.+.+..+++ .++.+..+-.--++-....|..++++|++.|+.+..|++
T Consensus 15 GIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~~ 76 (145)
T 2w6k_A 15 GIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAP 76 (145)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEECH
T ss_pred EEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeCH
Confidence 34433 345666665553 344444444444443334456899999999999998864
No 209
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=23.17 E-value=2.8e+02 Score=25.20 Aligned_cols=82 Identities=13% Similarity=0.115 Sum_probs=51.0
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcCc--c-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHH
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGK--I-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAEL 184 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gk--i-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~ 184 (331)
+++.+|-.|-+.. -++.+.+|.++-. | -..|=+.++...++++++.+ ++++|+..+-+-- .....+...
T Consensus 248 ~~i~~iEqPl~~~-----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~--~d~i~ik~~~~GGitea~~ia~l 320 (415)
T 2p3z_A 248 FNLKWIEECLPPQ-----QYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG--IDIMQPDVGWCGGLTTLVEIAAL 320 (415)
T ss_dssp GTCCEEECCSCTT-----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT--CSEECCCHHHHTCHHHHHHHHHH
T ss_pred cCCceEeCCCCcc-----hHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC--CCEEEeCccccCCHHHHHHHHHH
Confidence 3455666554322 2445555555422 3 23455567888898888854 8888887664311 122578999
Q ss_pred HHHhCCeEEEccc
Q 020082 185 CQLTGVKLITYGT 197 (331)
Q Consensus 185 ~~~~gi~via~~~ 197 (331)
|+++|+.++..+.
T Consensus 321 A~~~gi~v~~h~~ 333 (415)
T 2p3z_A 321 AKSRGQLVVPHGS 333 (415)
T ss_dssp HHHTTCCBCCCCC
T ss_pred HHHcCCEEEecCh
Confidence 9999999887653
No 210
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=23.10 E-value=1.1e+02 Score=28.02 Aligned_cols=70 Identities=10% Similarity=0.005 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+++|+.++..+.+
T Consensus 260 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 260 QEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQ-LIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcC-CCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 34456666655553 3333446777777777754 57777777654311 12247899999999999988875
No 211
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=23.01 E-value=97 Score=27.07 Aligned_cols=108 Identities=14% Similarity=0.220 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHHHcCCCccc-EEEEecCCCCC---chHHHHHHHHHHHHHcCc-ccEEecCcc------cHHHHHHHH
Q 020082 89 TSSIVRESIDVSRRRMDVPCLD-MLQFHWWDYSN---PGYLDALNHLTDLKEEGK-IKTVALTNF------DTERLRIIL 157 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lD-l~~lH~~d~~~---~~~~e~~~~l~~l~~~Gk-ir~iGvS~~------~~~~l~~~~ 157 (331)
..+.|..+++...+. | .+ .+++....... ......++.++.|+++|. |..||+..| .++.++..+
T Consensus 147 G~~~i~~af~~Ar~~---d-P~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l 222 (313)
T 1v0l_A 147 GNDWIEVAFRTARAA---D-PSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTL 222 (313)
T ss_dssp CTTHHHHHHHHHHHH---C-TTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHH
T ss_pred hHHHHHHHHHHHHhh---C-CCCEEEEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHH
Confidence 356788888777664 2 23 33444332221 123456788888999997 899999654 134444444
Q ss_pred ----HcCCCeeeecccccccccChhhhHHHHHHHhC--CeEEEcccccc
Q 020082 158 ----ENGIPVVSNQVQHSVVDMRPQQKMAELCQLTG--VKLITYGTVMG 200 (331)
Q Consensus 158 ----~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~g--i~via~~~l~~ 200 (331)
+.|.++.+-.+..+-.....-+.+++.|.++. ++++.|..-.+
T Consensus 223 ~~~a~~G~pv~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~D~ 271 (313)
T 1v0l_A 223 QNFAALGVDVAITELDIQGAPASTYANVTNDCLAVSRCLGITVWGVRDS 271 (313)
T ss_dssp HHHHTTTCEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSBGG
T ss_pred HHHHhcCCeEEEEeCCccHHHHHHHHHHHHHHHhcCCceEEEEECCCCC
Confidence 34655544444433111111247888888874 57777775443
No 212
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=23.00 E-value=21 Score=23.61 Aligned_cols=52 Identities=8% Similarity=-0.097 Sum_probs=24.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcC
Q 020082 247 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 298 (331)
Q Consensus 247 ~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~ 298 (331)
..++.+..+.|+|..++|-+--++...+.-..-|-+..+.+.+...+.+++.
T Consensus 5 ~~lk~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v 56 (77)
T 2k9q_A 5 NELKVERIRLSLTAKSVAEEMGISRQQLCNIEQSETAPVVVKYIAFLRSKGV 56 (77)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTCCSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCc
Confidence 4455555556666666554443332222222233332235666666666544
No 213
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=22.90 E-value=3.9e+02 Score=23.66 Aligned_cols=97 Identities=8% Similarity=-0.100 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEE-ecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-++. |+.+ -++.++..|-+. +-++.+.+++++-.|--. |=+.++++.++++++.+ .++++
T Consensus 195 ~~~~~a~~~~~~-l~~~----~~i~~iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v 263 (382)
T 2gdq_A 195 YDAAAAFKWERY-FSEW----TNIGWLEEPLPF-----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQR-CLDII 263 (382)
T ss_dssp CCHHHHHTTHHH-HTTC----SCEEEEECCSCS-----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHHHH-Hhhc----cCCeEEECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCCEE
Confidence 465554444332 4433 055567666432 235667777776555433 33456889999998865 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITY 195 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~ 195 (331)
|+..+-.-- .....+...|+++|+.++..
T Consensus 264 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 264 QPDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CCCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 887665311 12257899999999998887
No 214
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=22.84 E-value=1.2e+02 Score=26.00 Aligned_cols=72 Identities=15% Similarity=0.027 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcC
Q 020082 87 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENG 160 (331)
Q Consensus 87 ~~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~ 160 (331)
..+.+...+..+-..+-+|++.+-|=.+.......++..+++++.+.|+++|.. --+ ++-++...+++.+.+
T Consensus 73 ~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy--~~~D~~~ak~l~~~G 145 (268)
T 2htm_A 73 ARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPY--MGPDLVLAKRLAALG 145 (268)
T ss_dssp CCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCE--ECSCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeec--cCCCHHHHHHHHhcC
Confidence 357888888888888889999877544544444566689999999999999954 312 245666666666644
No 215
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=22.76 E-value=1.2e+02 Score=27.66 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=44.0
Q ss_pred HHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 129 NHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 129 ~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
+.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+++|+.++..++.
T Consensus 267 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~g-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 267 ESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQ-WIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp THHHHHHHHCCSCEEECTTCCSGGGTHHHHHTT-CCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcC-CCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 3455565554443 3333446677777777654 47777776654311 12247899999999999988875
No 216
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=22.63 E-value=22 Score=23.09 Aligned_cols=21 Identities=5% Similarity=0.048 Sum_probs=12.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHH
Q 020082 247 QTLKRIASKHGVSIPVVAVRY 267 (331)
Q Consensus 247 ~~l~~ia~~~g~s~aq~Al~~ 267 (331)
+.++.+..+.|+|..++|-+.
T Consensus 8 ~~l~~~r~~~gls~~~lA~~~ 28 (76)
T 1adr_A 8 ERIRARRKKLKIRQAALGKMV 28 (76)
T ss_dssp HHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 455555666677666666444
No 217
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=22.55 E-value=3.7e+02 Score=23.03 Aligned_cols=97 Identities=5% Similarity=-0.001 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHc-CcccEEecCcccHHHHHHHHHc--CCCee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN--GIPVV 164 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~--~~~~~ 164 (331)
++.+... .+-+.|.++|+++|++-+ |.. .+ .-++.+..+.+. ..++..++.......++.+++. +...+
T Consensus 24 ~~~~~K~-~i~~~L~~~Gv~~IE~g~---p~~-~~---~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 24 FDVKEKI-QIALQLEKLGIDVIEAGF---PIS-SP---GDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp CCHHHHH-HHHHHHHHHTCSEEEEEC---GGG-CH---HHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSE
T ss_pred CCHHHHH-HHHHHHHHcCCCEEEEeC---CCC-Cc---cHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCC
Confidence 4555444 444559999999999863 321 22 233444444443 4567777776556667766652 11222
Q ss_pred eecc---------cccccccChh------hhHHHHHHHhCCeEE
Q 020082 165 SNQV---------QHSVVDMRPQ------QKMAELCQLTGVKLI 193 (331)
Q Consensus 165 ~vq~---------~~nl~~~~~~------~~~~~~~~~~gi~vi 193 (331)
.+.+ .+|+ +...+ .+++++|++.|+.+.
T Consensus 96 ~v~i~~~~Sd~~~~~nl-~~s~~e~l~~~~~~v~~a~~~g~~v~ 138 (293)
T 3ewb_X 96 QIHIFLATSDVHMEYKL-KMSRAEVLASIKHHISYARQKFDVVQ 138 (293)
T ss_dssp EEEEEEECSHHHHHHTT-CCCHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEEecCcHHHHHHHh-CCCHHHHHHHHHHHHHHHHhCCCEEE
Confidence 2222 2232 12211 367888999998765
No 218
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=22.39 E-value=2.1e+02 Score=25.04 Aligned_cols=48 Identities=8% Similarity=-0.147 Sum_probs=26.7
Q ss_pred HHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEec
Q 020082 98 DVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL 145 (331)
Q Consensus 98 ~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGv 145 (331)
-+.|+.+|.+++=+..-..|.....+.+.+.++++.+++.|+=-.+.+
T Consensus 33 ~~ilk~~G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 33 ENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHHHHTTCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 345566777766665422333222335666666677777776555553
No 219
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=22.37 E-value=4.3e+02 Score=23.77 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-+ +.|+.++.++ +..|-+.. -++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++
T Consensus 189 ~~~~~A~~~~-~~L~~~~i~~-----iEeP~~~~-----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~-a~d~v 256 (405)
T 3rr1_A 189 VSAPMAKVLI-KELEPYRPLF-----IEEPVLAE-----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAG-GVSIL 256 (405)
T ss_dssp BCHHHHHHHH-HHHGGGCCSC-----EECSSCCS-----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHC-CCSEE
T ss_pred CCHHHHHHHH-HHHHhcCCCE-----EECCCCcc-----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHh-CCCeE
Confidence 4655544433 3466666554 45554321 346677888776664 3444567899999998865 58888
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
|+..+-.-- .....+...|+.+|+.++..+.
T Consensus 257 ~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 257 QPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp CCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred EEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 887665311 1235789999999999988764
No 220
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=22.37 E-value=1.2e+02 Score=17.39 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHH
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVR 266 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~ 266 (331)
++.+.|..+|++.|+|.+++.-.
T Consensus 12 ~l~~~Ld~~a~~~g~srS~~ir~ 34 (45)
T 2cpg_A 12 SVLENLEKMAREMGLSKSAMISV 34 (45)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHH
Confidence 55689999999999998765433
No 221
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=22.36 E-value=1.6e+02 Score=25.44 Aligned_cols=23 Identities=13% Similarity=-0.077 Sum_probs=16.8
Q ss_pred ceeEeecccCCcHhHHHHhhchh
Q 020082 274 VAGSMIGVRLGLAEHIQDTNAIF 296 (331)
Q Consensus 274 v~~~i~G~~~~~~~~l~e~~~a~ 296 (331)
+..|+=|.|.+..+++++.++..
T Consensus 207 vpLVlHGgSG~~~e~i~~ai~~G 229 (288)
T 3q94_A 207 VPLVLHGGTGIPTADIEKAISLG 229 (288)
T ss_dssp SCEEECCCTTCCHHHHHHHHHTT
T ss_pred CCEEEeCCCCCCHHHHHHHHHcC
Confidence 55567777766688888888765
No 222
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=22.35 E-value=21 Score=23.90 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeec-ccCCcHhHHHHhhchhcC
Q 020082 247 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG-VRLGLAEHIQDTNAIFML 298 (331)
Q Consensus 247 ~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G-~~~~~~~~l~e~~~a~~~ 298 (331)
..++.+-.+.|+|..++|-+--++...+.-..-| .++.+.+.+...+++++.
T Consensus 13 ~~ik~~R~~~gltq~elA~~~gis~~~is~~E~G~~~~p~~~~l~~ia~~l~v 65 (78)
T 3qq6_A 13 QRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDV 65 (78)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSCCCCBHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHCc
Confidence 5566666667777776665443332222222223 222225555555555543
No 223
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=22.14 E-value=1.6e+02 Score=25.54 Aligned_cols=100 Identities=9% Similarity=0.013 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEe-cCCCC-Cc---hHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCe
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYS-NP---GYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 163 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH-~~d~~-~~---~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~ 163 (331)
+.+.+.+..++ +-.-|-|.||+=--- .|... .+ .++.+...++.+++++. -|-|-++.++.++++++.|.++
T Consensus 44 ~~~~a~~~a~~-~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 44 ARDDALRRAER-MIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADL 120 (294)
T ss_dssp CTTHHHHHHHH-HHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCE
Confidence 44555544433 445689999986422 23211 11 13346667777776533 4777899999999999887433
Q ss_pred eeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 164 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 164 ~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
. +..|..+ +.++++.+++.|++++.+..
T Consensus 121 I---NdVsg~~---d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 121 I---NDIWGFR---QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp E---EETTTTC---STTHHHHHSSSSCEEEEECC
T ss_pred E---EECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 2 2233332 34799999999999999875
No 224
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=21.92 E-value=1.8e+02 Score=25.55 Aligned_cols=17 Identities=18% Similarity=0.151 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHcCCC
Q 020082 243 QVLLQTLKRIASKHGVS 259 (331)
Q Consensus 243 ~~~~~~l~~ia~~~g~s 259 (331)
..+...|+.+++++|.+
T Consensus 225 ~~l~~~l~~~~~rygKp 241 (334)
T 1fob_A 225 ASLKTSLANLQSTYDKP 241 (334)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHCCC
Confidence 34556677777776643
No 225
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=21.87 E-value=3.6e+02 Score=22.72 Aligned_cols=109 Identities=10% Similarity=0.015 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHc-CCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHc-CCCeeeecccc
Q 020082 93 VRESIDVSRRRM-DVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQH 170 (331)
Q Consensus 93 i~~~~~~SL~rL-g~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~~~~~~vq~~~ 170 (331)
+.++++-.++-+ +... +..+.++.... .....+.+++..++--+..+-....+.+.+..+... ....+++.+..
T Consensus 126 ~~~~l~l~~~l~P~~k~--vgvi~~~~~~~--s~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~ 201 (302)
T 3lkv_A 126 VEQHVELIKEILPNVKS--IGVVYNPGEAN--AVSLMELLKLSAAKHGIKLVEATALKSADVQSATQAIAEKSDVIYALI 201 (302)
T ss_dssp HHHHHHHHHHHSTTCCE--EEEEECTTCHH--HHHHHHHHHHHHHHTTCEEEEEECSSGGGHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHhCCCCCE--EEEEeCCCccc--HHHHHHHHHHHHHHcCCEEEEEecCChHHHHHHHHhccCCeeEEEEeC
Confidence 677777655554 3443 45555554221 233455565555444444443333333333333321 11334443322
Q ss_pred cccccChhhhHHHHHHHhCCeEEEcccc--ccccccc
Q 020082 171 SVVDMRPQQKMAELCQLTGVKLITYGTV--MGGLLSE 205 (331)
Q Consensus 171 nl~~~~~~~~~~~~~~~~gi~via~~~l--~~G~L~g 205 (331)
.-........+...+.+.++.+++.... ..|.|.+
T Consensus 202 d~~~~~~~~~i~~~~~~~~iPv~~~~~~~v~~G~l~~ 238 (302)
T 3lkv_A 202 DNTVASAIEGMIVAANQAKTPVFGAATSYVERGAIAS 238 (302)
T ss_dssp CHHHHHTHHHHHHHHHHTTCCEEESSHHHHHTTCSEE
T ss_pred CcchhhHHHHHHHHHhhcCCceeecccccccCCceEE
Confidence 2111222346788899999999988653 3565544
No 226
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=21.81 E-value=63 Score=21.30 Aligned_cols=55 Identities=16% Similarity=0.120 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCC
Q 020082 245 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLS 299 (331)
Q Consensus 245 ~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~ 299 (331)
.-..++.+-.+.|+|..++|-+--++...+.-..-|-++.+.+.+...+.+++.+
T Consensus 12 ~g~~lk~~R~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~v~ 66 (82)
T 3s8q_A 12 VSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVS 66 (82)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCCCCBHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCcC
Confidence 3466777777778887777766544333333333343333366666666666543
No 227
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=21.70 E-value=2.9e+02 Score=26.31 Aligned_cols=84 Identities=14% Similarity=0.066 Sum_probs=52.9
Q ss_pred HHcCCCcccEEEEecCCCC-CchHHHHHHHHHHHHHc-CcccEEecCcccHHHHHHHHHc--CCCeeeecccccccccCh
Q 020082 102 RRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN--GIPVVSNQVQHSVVDMRP 177 (331)
Q Consensus 102 ~rLg~d~lDl~~lH~~d~~-~~~~~e~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~--~~~~~~vq~~~nl~~~~~ 177 (331)
..-|-|.||+= |+.. .+..++.-+.+..+++. +. -|-|-++.++.++++++. |.++ +|- .|..+
T Consensus 350 v~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~v--pisIDT~~~~v~eaal~~~~G~~i-INd--is~~~--- 417 (566)
T 1q7z_A 350 VEKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSNV--PLSLDIQNVDLTERALRAYPGRSL-FNS--AKVDE--- 417 (566)
T ss_dssp HHTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTCS--CEEEECCCHHHHHHHHHHCSSCCE-EEE--EESCH---
T ss_pred HHCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCCc--eEEEeCCCHHHHHHHHHhcCCCCE-EEE--CCcch---
Confidence 35699999997 4321 11123443444444433 22 367778999999999986 6433 222 22222
Q ss_pred h--hhHHHHHHHhCCeEEEccc
Q 020082 178 Q--QKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 178 ~--~~~~~~~~~~gi~via~~~ 197 (331)
+ .++++.+++.|+.++.+..
T Consensus 418 ~~~~~~~~~~~~~g~~vV~m~~ 439 (566)
T 1q7z_A 418 EELEMKINLLKKYGGTLIVLLM 439 (566)
T ss_dssp HHHHHHHHHHHHHCCEEEEESC
T ss_pred hhHHHHHHHHHHhCCeEEEEeC
Confidence 3 5789999999999999874
No 228
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=21.52 E-value=3.4e+02 Score=23.62 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=56.2
Q ss_pred HHHcCCCcccEEEEe-cCCCCC----chHHHHHHHHHHHHHcCcccEEecCcccHHHHHHHHHcCCCeeeeccccccccc
Q 020082 101 RRRMDVPCLDMLQFH-WWDYSN----PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM 175 (331)
Q Consensus 101 L~rLg~d~lDl~~lH-~~d~~~----~~~~e~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~ 175 (331)
+-.-|-|.||+=--- +|.... ..++.+...++.++++-.+ -|-|-++.++.++++++.|.++. +..|....
T Consensus 42 ~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v-piSIDT~~~~Va~aAl~aGa~iI---NDVsg~~~ 117 (314)
T 2vef_A 42 LIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV-LISIDTWKSQVAEAALAAGADLV---NDITGLMG 117 (314)
T ss_dssp HHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECSCHHHHHHHHHTTCCEE---EETTTTCS
T ss_pred HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc-eEEEeCCCHHHHHHHHHcCCCEE---EECCCCCC
Confidence 334588889885422 232110 1133456666667765222 47788999999999999874332 22333322
Q ss_pred ChhhhHHHHHHHhCCeEEEccc
Q 020082 176 RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 176 ~~~~~~~~~~~~~gi~via~~~ 197 (331)
. .++++.+++.|++++.+..
T Consensus 118 d--~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 118 D--EKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp C--TTHHHHHHHHTCEEEEECC
T ss_pred C--hHHHHHHHHcCCCEEEEec
Confidence 2 4799999999999999854
No 229
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=21.46 E-value=1.5e+02 Score=26.56 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccccccc
Q 020082 128 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 201 (331)
Q Consensus 128 ~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l~~G 201 (331)
++.+.++++.-.| -..|=|.++.+.++++++.+ .++++|+..+-.-- .....+...|+++|+.++..+.+.++
T Consensus 234 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 234 RAGMVRLNASSPAPIMADESIECVEDAFNLAREG-AASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCccH
Confidence 4555666655334 34455567777888777654 46667766543211 12247889999999999887766544
No 230
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=21.20 E-value=33 Score=23.42 Aligned_cols=22 Identities=9% Similarity=0.144 Sum_probs=15.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHH
Q 020082 246 LQTLKRIASKHGVSIPVVAVRY 267 (331)
Q Consensus 246 ~~~l~~ia~~~g~s~aq~Al~~ 267 (331)
-+.++.+-.+.|+|..++|-+-
T Consensus 15 ~~~l~~~r~~~glsq~~lA~~~ 36 (91)
T 1x57_A 15 GKVIQQGRQSKGLTQKDLATKI 36 (91)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHH
Confidence 3667777777888887776554
No 231
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.20 E-value=1.6e+02 Score=24.31 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHc-CcccEEecCcccHH--HHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEEcccc
Q 020082 124 YLDALNHLTDLKEE-GKIKTVALTNFDTE--RLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 124 ~~e~~~~l~~l~~~-Gkir~iGvS~~~~~--~l~~~~~~~~~~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~l 198 (331)
..+++.+|..+++. +||.-+|..|.... .+..+. +.+ ..+..|+ +.+.-+..+..+++.|+.++.-..+
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll--~~~--i~~~~~~--~~ee~~~~i~~l~~~G~~vVVG~~~ 163 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTF--NLR--LDQRSYI--TEEDARGQINELKANGTEAVVGAGL 163 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHH--TCC--EEEEEES--SHHHHHHHHHHHHHTTCCEEEESHH
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHh--CCc--eEEEEeC--CHHHHHHHHHHHHHCCCCEEECCHH
Confidence 45789999999875 67888888886553 344443 333 3333333 2223357899999999988765543
No 232
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=21.19 E-value=1.6e+02 Score=26.54 Aligned_cols=87 Identities=10% Similarity=0.033 Sum_probs=56.4
Q ss_pred ccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 020082 109 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 186 (331)
Q Consensus 109 lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~ 186 (331)
+++.++-.|-+.. -++.+.++.++-.| -..|=|.++.+.+.++++.+ .++++|+..+..-- .....+...|+
T Consensus 215 ~~i~~iEeP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~~~~ia~~A~ 288 (388)
T 3qld_A 215 YDLQFIEQPLPED-----DWFDLAKLQASLRTPVCLDESVRSVRELKLTARLG-AARVLNVKPGRLGGFGATLRALDVAG 288 (388)
T ss_dssp GCCSCEECCSCTT-----CHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCCcEEECCCCcc-----cHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEECchhhCCHHHHHHHHHHHH
Confidence 4555666654322 24556666665444 35666778899999888765 47778877654311 12357899999
Q ss_pred HhCCeEEEccccccc
Q 020082 187 LTGVKLITYGTVMGG 201 (331)
Q Consensus 187 ~~gi~via~~~l~~G 201 (331)
++|+.++..+.+..+
T Consensus 289 ~~gi~~~~~~~~es~ 303 (388)
T 3qld_A 289 EAGMAAWVGGMYETG 303 (388)
T ss_dssp HTTCEEEECCCCCCH
T ss_pred HCCCeEEecCccchH
Confidence 999999877665443
No 233
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=21.12 E-value=1.3e+02 Score=27.23 Aligned_cols=97 Identities=8% Similarity=-0.005 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-+ +.|+.++ +.++-.|-+ -++.+.+++++-.| -..|=|.++.+.++++++.+ .++++
T Consensus 223 w~~~~A~~~~-~~l~~~~-----i~~iEqP~~-------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v 288 (398)
T 4dye_A 223 WSVPDSVRAG-IALEELD-----LEYLEDPCV-------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLN-AVDVI 288 (398)
T ss_dssp SCHHHHHHHH-HHHGGGC-----CSEEECCSS-------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHH-HHHhhcC-----CCEEcCCCC-------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhC-CCCEE
Confidence 4555443332 3455554 444445432 35667777766444 34455667888888888765 57788
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEEcccc
Q 020082 167 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 198 (331)
Q Consensus 167 q~~~nl~~~-~~~~~~~~~~~~~gi~via~~~l 198 (331)
|+..+-.-- .....+...|+++|+.++..+..
T Consensus 289 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 289 HGDVYKWGGIAATKALAAHCETFGLGMNLHSGG 321 (398)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCEEEECCSC
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 877654311 12357899999999999998744
No 234
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=21.10 E-value=1.5e+02 Score=25.37 Aligned_cols=37 Identities=30% Similarity=0.245 Sum_probs=22.6
Q ss_pred HHHHHhCCCceeEeecccCCcHhHHHHhhchhcC-CCC
Q 020082 265 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML-SLD 301 (331)
Q Consensus 265 l~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~-~L~ 301 (331)
.+=++++|.|+..++|-.+.+++..-+.+.+... ||+
T Consensus 224 ~~el~~~~diDG~LVGgASL~~~~F~~Ii~~~~~~~~~ 261 (267)
T 3ta6_A 224 VGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP 261 (267)
T ss_dssp HHHHHTSTTCCEEEECGGGGSHHHHHHHHHHHHC----
T ss_pred HHHHhcCCCCCEEEechHhcCHHHHHHHHHHHhcCCCC
Confidence 3456778888888888776556666666655544 554
No 235
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=21.10 E-value=19 Score=22.58 Aligned_cols=18 Identities=33% Similarity=0.285 Sum_probs=8.2
Q ss_pred HHHHHHHcCCCHHHHHHH
Q 020082 249 LKRIASKHGVSIPVVAVR 266 (331)
Q Consensus 249 l~~ia~~~g~s~aq~Al~ 266 (331)
++.+..+.|+|..++|-+
T Consensus 6 l~~~r~~~g~s~~~lA~~ 23 (66)
T 2xi8_A 6 LKLIREKKKISQSELAAL 23 (66)
T ss_dssp HHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHH
Confidence 333444445555554433
No 236
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=21.08 E-value=1.2e+02 Score=24.93 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCC-CchHHHHHHHHHHHHHcCcccEEecCccc--HHHHHHHHHcCCCeee
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFD--TERLRIILENGIPVVS 165 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~-~~~~~e~~~~l~~l~~~Gkir~iGvS~~~--~~~l~~~~~~~~~~~~ 165 (331)
....+...+.+.+++.+.+.-.+. +--.+.. ..+...+.+.+..|++.|- .|++.+|. ...+..+.. .+++.
T Consensus 107 ~~~~~~~~l~~~l~~~~~~~~~l~-lEitE~~~~~~~~~~~~~l~~L~~~G~--~ialDdfG~g~s~l~~L~~--l~~d~ 181 (250)
T 4f3h_A 107 SDPQMIDTIREQLAVYGVPGERLW-LQTPESKVFTHLRNAQQFLASVSAMGC--KVGLEQFGSGLDSFQLLAH--FQPAF 181 (250)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGEE-EEEEHHHHHHSHHHHHHHHHHHHTTTC--EEEEEEETSSTHHHHHHTT--SCCSE
T ss_pred CCcHHHHHHHHHHHHcCCCcceEE-EEEechhhhcCHHHHHHHHHHHHHCCC--EEEEeCCCCCchHHHHHhh--CCCCE
Confidence 345577888889999887643332 2222111 0114578899999999997 55555543 234444433 45666
Q ss_pred eccccccccc---C-----hhhhHHHHHHHhCCeEEEccc
Q 020082 166 NQVQHSVVDM---R-----PQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 166 vq~~~nl~~~---~-----~~~~~~~~~~~~gi~via~~~ 197 (331)
+-+.-+++.. . .-+.++..|+..|+.+++=++
T Consensus 182 iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeGV 221 (250)
T 4f3h_A 182 LKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEFV 221 (250)
T ss_dssp EEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECCC
T ss_pred EEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEecc
Confidence 6666444321 1 124678999999999997665
No 237
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=21.04 E-value=65 Score=22.62 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCCCceeEeecccCCcHhHHHHhhchhcCC
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLS 299 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~~l~~~~v~~~i~G~~~~~~~~l~e~~~a~~~~ 299 (331)
.+-..++.+-.+.|+|..++|-+--++...+.-..-|-++.+.+.+...+.+++.+
T Consensus 28 ~ig~~lr~~R~~~gltq~elA~~~gis~~~is~iE~G~~~ps~~~l~~ia~~l~v~ 83 (99)
T 3g5g_A 28 KVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVS 83 (99)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCcC
Confidence 34467888888888888887766544333333333343333366666666665543
No 238
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=20.96 E-value=3.3e+02 Score=21.96 Aligned_cols=86 Identities=8% Similarity=0.055 Sum_probs=45.9
Q ss_pred CcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecCc-----ccH-HHHHHHHHcCCCeeeecccccccc------
Q 020082 107 PCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN-----FDT-ERLRIILENGIPVVSNQVQHSVVD------ 174 (331)
Q Consensus 107 d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS~-----~~~-~~l~~~~~~~~~~~~vq~~~nl~~------ 174 (331)
|++ +..+|.+..........++.+.++.+.|.+--++=-. ... +.+..+.+.+. .+|+..+-+.
T Consensus 94 d~v-i~~~h~~~~~~~~~~~~~~~~~~~i~~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g~---~iEvn~~~~~~~~~g~ 169 (245)
T 1m65_A 94 DLI-IAGFHEPVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQV---ALEINNSSFLHSRKGS 169 (245)
T ss_dssp SEE-EEECCTTTSCCCCHHHHHHHHHHHHHTSCCSEECCTTCTTSCCCHHHHHHHHHHHTC---EEEEETTC--------
T ss_pred CEE-EEeecCCccCcchHHHHHHHHHHHHhCCCCCEEECCCCccchhHHHHHHHHHHHcCC---EEEEECCCCcccCCCC
Confidence 443 3355776432211334445555555589888776322 122 33555555552 4555544431
Q ss_pred cChhhhHHHHHHHhCCeEEEcc
Q 020082 175 MRPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 175 ~~~~~~~~~~~~~~gi~via~~ 196 (331)
..+...++..|++.|+.+++-|
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~gS 191 (245)
T 1m65_A 170 EDNCREVAAAVRDAGGWVALGS 191 (245)
T ss_dssp --CHHHHHHHHHHHTCCEEEEC
T ss_pred CCchHHHHHHHHHcCCEEEEEC
Confidence 1334678999999999876544
No 239
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=20.93 E-value=1.2e+02 Score=21.76 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Q 020082 244 VLLQTLKRIASKHGVSIPVVAVRYIL 269 (331)
Q Consensus 244 ~~~~~l~~ia~~~g~s~aq~Al~~~l 269 (331)
+.++++.++|..|++++.+++-.|+.
T Consensus 45 ~VldKc~ELC~~y~lda~e~VeeWmA 70 (101)
T 2keb_A 45 ALIEKLVELCVQYGQNEEGMVGELIA 70 (101)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 67899999999999999888877765
No 240
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=20.77 E-value=2.7e+02 Score=24.34 Aligned_cols=100 Identities=9% Similarity=0.048 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEe-cCCCCCch---HHHHHHHHHHHHHc--CcccEEecCcccHHHHHHHHHcCCC
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPG---YLDALNHLTDLKEE--GKIKTVALTNFDTERLRIILENGIP 162 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH-~~d~~~~~---~~e~~~~l~~l~~~--Gkir~iGvS~~~~~~l~~~~~~~~~ 162 (331)
+.+.+.+..++ +-.-|-|.||+=--- +|....+. ++.+...++.++++ +. -|-|-++.++.++++++.|..
T Consensus 63 ~~~~a~~~A~~-~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 63 SDAAARDAVHR-AVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGAD 139 (318)
T ss_dssp -CHHHHHHHHH-HHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCC
Confidence 34444444432 445589999995432 23311121 22345556777765 33 478889999999999987744
Q ss_pred eeeecccccccccChhhhHHHHHHHhCCeEEEccc
Q 020082 163 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 163 ~~~vq~~~nl~~~~~~~~~~~~~~~~gi~via~~~ 197 (331)
+. +..|..+ +.++++.+++.|+.++.+..
T Consensus 140 iI---NDVsg~~---d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 140 LI---NDTWGGV---DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp EE---EETTSSS---STTHHHHHHHHTCEEEEECC
T ss_pred EE---EECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 21 2223222 34799999999999999873
No 241
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=20.71 E-value=2e+02 Score=23.84 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=16.2
Q ss_pred hhHHHHHHHhCCeEEEccc
Q 020082 179 QKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~~~ 197 (331)
.++++.|+++|+.+.+|.+
T Consensus 194 ~~~v~~~~~~G~~V~~WTv 212 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWAA 212 (250)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 4789999999999999964
No 242
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=20.70 E-value=77 Score=20.56 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccE-EEEecCCCCCchHHHHHHHHHHHHHcCc
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDM-LQFHWWDYSNPGYLDALNHLTDLKEEGK 139 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl-~~lH~~d~~~~~~~e~~~~l~~l~~~Gk 139 (331)
.+.+.+...+...++. + .|. ++|. .|...+ ++.+++.|..+++.|.
T Consensus 27 v~~~~L~~~l~~~~~~-~---~~~~V~I~-aD~~~~-y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 27 LTEEMVTQLSRQEFDK-D---NNTLFLVG-GAKEVP-YEEVIKALNLLHLAGI 73 (74)
T ss_dssp ECHHHHHHHHHHHHHH-C---TTCCEEEE-ECTTSC-HHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhh-C---CCceEEEE-cCCCCC-HHHHHHHHHHHHHcCC
Confidence 3566676666655443 2 232 3343 455666 7899999999999884
No 243
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=20.70 E-value=1.5e+02 Score=17.79 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHH
Q 020082 243 QVLLQTLKRIASKHGVSIPVVAVRY 267 (331)
Q Consensus 243 ~~~~~~l~~ia~~~g~s~aq~Al~~ 267 (331)
.++.+.|..+|.+.|+|.+++.-..
T Consensus 18 ~el~~~l~~~a~~~g~s~s~~ir~a 42 (55)
T 2k9i_A 18 QEWHDRLMEIAKEKNLTLSDVCRLA 42 (55)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 3566899999999999988765443
No 244
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=20.65 E-value=2.3e+02 Score=26.01 Aligned_cols=69 Identities=14% Similarity=0.191 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEEccc
Q 020082 128 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 197 (331)
Q Consensus 128 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~~~~~~~~~~~gi~via~~~ 197 (331)
++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++|+..+-.-- .....+...|+++|+.++..+.
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNK-LIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTT-CCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcC-CccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 45577777664453 4455668899999998865 57888887665311 1235789999999999987766
No 245
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=20.64 E-value=3.5e+02 Score=22.11 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHhCCCc-eeEeecccCCcHhHHHHhhchh
Q 020082 258 VSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIF 296 (331)
Q Consensus 258 ~s~aq~Al~~~l~~~~v-~~~i~G~~~~~~~~l~e~~~a~ 296 (331)
.|-.++||.++..+..- ..++.|+.-...+|.-.|+..+
T Consensus 77 ~TD~e~Al~~~~~~~~~~~I~i~Ga~GgRlDH~lani~lL 116 (222)
T 3mel_A 77 DTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLP 116 (222)
T ss_dssp SCHHHHHHHHHHHHCTTSEEEEECCCSSCHHHHHHHHTGG
T ss_pred CCHHHHHHHHHHHhCCCceEEEEccCCCCHHHHHHHHHHH
Confidence 46678899999887654 6778888766688887777665
No 246
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=20.44 E-value=1.5e+02 Score=26.80 Aligned_cols=91 Identities=7% Similarity=0.036 Sum_probs=59.7
Q ss_pred HHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcc-cEEecCcccHHHHHHHHHcCCCeeeeccccccccc-Chh
Q 020082 101 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQ 178 (331)
Q Consensus 101 L~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gki-r~iGvS~~~~~~l~~~~~~~~~~~~vq~~~nl~~~-~~~ 178 (331)
+++|. -+++ ++-.|- + -++.+.++++.-.| -..|=|.++.+.++++++.+ .++++|+..+..-- ...
T Consensus 230 ~~~L~--~~~i-~iEeP~---~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~-a~d~v~ik~~~~GGit~~ 298 (391)
T 4e8g_A 230 SRECP--EIPF-VLEQPC---N----TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQG-LCDGFGMKLTRIGGLQQM 298 (391)
T ss_dssp HHHCT--TSCE-EEESCS---S----SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHHH
T ss_pred HHHHh--hcCe-EEecCC---c----cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeCccccCCHHHH
Confidence 44553 3467 676662 2 24567777766555 35566678899999988855 57788876554311 122
Q ss_pred hhHHHHHHHhCCeEEEcccccccc
Q 020082 179 QKMAELCQLTGVKLITYGTVMGGL 202 (331)
Q Consensus 179 ~~~~~~~~~~gi~via~~~l~~G~ 202 (331)
..+...|+++|+.++..+.+.+++
T Consensus 299 ~~ia~~A~~~gi~~~~~~~~es~i 322 (391)
T 4e8g_A 299 AAFRDICEARALPHSCDDAWGGDI 322 (391)
T ss_dssp HHHHHHHHHTTCCEEEECSSCSHH
T ss_pred HHHHHHHHHcCCeEEeCCcCCCHH
Confidence 578999999999999887765543
No 247
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=20.32 E-value=4.8e+02 Score=23.53 Aligned_cols=97 Identities=9% Similarity=0.073 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCccc-EEecCcccHHHHHHHHHcCCCeeee
Q 020082 88 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSN 166 (331)
Q Consensus 88 ~~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~v 166 (331)
++.+...+-+ +.|+.++.+ ++..|-+. +-++.+.+++++-.|- ..|=+.++.+.++++++.+ .++++
T Consensus 241 ~~~~~Ai~~~-~~Le~~~i~-----~iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~-a~D~v 308 (412)
T 3stp_A 241 WNLDYAKRML-PKLAPYEPR-----WLEEPVIA-----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRK-AVSVL 308 (412)
T ss_dssp SCHHHHHHHH-HHHGGGCCS-----EEECCSCT-----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT-CCSEE
T ss_pred CCHHHHHHHH-HHHHhcCCC-----EEECCCCc-----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcC-CCCEE
Confidence 4666554433 346666544 44555332 1356678888876664 4444567899999999865 58888
Q ss_pred cccccccc-cChhhhHHHHHHHhCCeEEEcc
Q 020082 167 QVQHSVVD-MRPQQKMAELCQLTGVKLITYG 196 (331)
Q Consensus 167 q~~~nl~~-~~~~~~~~~~~~~~gi~via~~ 196 (331)
|+..+-.- -.....+...|+++|+.++..+
T Consensus 309 ~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 309 QYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp CCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred ecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 88765431 1123578999999999999877
No 248
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=20.28 E-value=1.1e+02 Score=24.83 Aligned_cols=74 Identities=7% Similarity=-0.054 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEEecCCCCCchHHHHHHHHHHHHHcCcccEEecC-cccHHHHHHHHHcCCCeeeec
Q 020082 89 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 167 (331)
Q Consensus 89 ~~~~i~~~~~~SL~rLg~d~lDl~~lH~~d~~~~~~~e~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~vq 167 (331)
+++.++.. ..+|.||+=+.+. -+.+..... +....|.... ...+..+||. |.+++.+.++++. ..++++|
T Consensus 11 ~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~~-~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 81 (205)
T 1nsj_A 11 NLEDALFS-----VESGADAVGFVFY-PKSKRYISP-EDARRISVEL-PPFVFRVGVFVNEEPEKILDVASY-VQLNAVQ 81 (205)
T ss_dssp SHHHHHHH-----HHHTCSEEEEECC-TTCTTBCCH-HHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH-HTCSEEE
T ss_pred cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCCH-HHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 45555443 4679999888742 222222212 3334443222 2468899986 5678888888764 3689999
Q ss_pred cccc
Q 020082 168 VQHS 171 (331)
Q Consensus 168 ~~~n 171 (331)
++-+
T Consensus 82 LHG~ 85 (205)
T 1nsj_A 82 LHGE 85 (205)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 8743
Done!