BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020091
(331 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225470583|ref|XP_002273705.1| PREDICTED: F-box protein At1g70590 [Vitis vinifera]
Length = 335
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/346 (69%), Positives = 270/346 (78%), Gaps = 26/346 (7%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSI---KSTE 57
MKQRTWP +S GSRFTAL+ + S +K + RS+ S +I S E
Sbjct: 1 MKQRTWPVKSEGSRFTALRL-----------YSGSGKKEETRLRSKRYSSITIPFRSSRE 49
Query: 58 GHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG- 116
DF+ LP D+L KIAA+FTLP L+ ASLVC+SW D+LRPLREAM+LL+WGKRFKHG G
Sbjct: 50 ETDFSKLPDDILQKIAATFTLPDLQTASLVCRSWRDSLRPLREAMLLLKWGKRFKHGHGG 109
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ---- 172
VR N+ KALDSFLKGAARGSTLAMVDAGL+YWEM KKE +I+LYR+AA LGDP AQ
Sbjct: 110 VRPNIQKALDSFLKGAARGSTLAMVDAGLIYWEMGKKEESIALYRKAAELGDPTAQCNLG 169
Query: 173 -------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
P EEA K LY +S AG+VRAQYQLALCLHRGRG+D NL EAARWYL+AAEG
Sbjct: 170 ISYLHSEPPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAARWYLKAAEG 229
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
GYVRAMYN SLCYS+GEGL SHRQAR+WMKRAAD GH KAQ EHGLGLF+EGEMMKAVV
Sbjct: 230 GYVRAMYNVSLCYSYGEGLVHSHRQARRWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVV 289
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 331
YLELATRAGETAA HVKNVILQQLS TSRDRAML+ D+WRA+P+ H
Sbjct: 290 YLELATRAGETAAAHVKNVILQQLSVTSRDRAMLLADNWRALPTSH 335
>gi|255574005|ref|XP_002527920.1| conserved hypothetical protein [Ricinus communis]
gi|223532695|gb|EEF34477.1| conserved hypothetical protein [Ricinus communis]
Length = 329
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 262/343 (76%), Gaps = 26/343 (7%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MKQRTWP RS GS+F +L P T +++ I +S S S +G D
Sbjct: 1 MKQRTWPSRSDGSKFKSLPLPYT-----------ISKREIIPSKSVISFS---VPKDGRD 46
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRK 119
F++LPFD+L KIAASFTLP L+ ASLVC+SW D LRPLREAMV L+WGKRFKHGRG VR
Sbjct: 47 FSTLPFDILIKIAASFTLPNLQTASLVCRSWRDGLRPLREAMVFLKWGKRFKHGRGGVRP 106
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ------- 172
NL KALDSFLKG A GS LAMVDAGL+YWEM K+ AI+LY +AA LGDPA Q
Sbjct: 107 NLQKALDSFLKGVALGSPLAMVDAGLVYWEMGFKDKAIALYLKAAELGDPAGQCNLGIYY 166
Query: 173 ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P +EA+K L QAS AGHVRAQYQLALCLH+GRGVD NLQEAA+WYL+AA GGYV
Sbjct: 167 VQVEPPKPKEAIKWLLQASNAGHVRAQYQLALCLHQGRGVDHNLQEAAKWYLKAAAGGYV 226
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
RAMYN +LCYS GEGL S+RQARKWMKRAAD GH KAQ EHGLGLF+EGEMMKAVVYLE
Sbjct: 227 RAMYNVALCYSVGEGLAQSYRQARKWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVYLE 286
Query: 289 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 331
LATRAGETAA HVKNVILQQLS TSRDR ML+ DSWRA+PS H
Sbjct: 287 LATRAGETAAAHVKNVILQQLSTTSRDRVMLLADSWRALPSSH 329
>gi|224110896|ref|XP_002315673.1| predicted protein [Populus trichocarpa]
gi|222864713|gb|EEF01844.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/341 (68%), Positives = 267/341 (78%), Gaps = 21/341 (6%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MKQ TWP RS GSRF +L PI + + S K+ K S SR I+S++G D
Sbjct: 1 MKQSTWPGRSDGSRFKSL--PI------KHQFHQSEFKSTSKFWSASLASRQIRSSDG-D 51
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRK 119
F+ LPFD+L KIAASFTLP L+AASLVCKSW++ LRPLREAM+ L+WGKRFKHGRG VR
Sbjct: 52 FSKLPFDILTKIAASFTLPNLQAASLVCKSWSEGLRPLREAMLFLKWGKRFKHGRGGVRP 111
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ------- 172
NL KAL+SFLKGAARGSTLAMVDAGL+YWE+ K+ AI+LY +AA LGD + Q
Sbjct: 112 NLSKALESFLKGAARGSTLAMVDAGLLYWEIGDKDKAIALYEKAAKLGDRSGQCNLGLAY 171
Query: 173 ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P+ +EAVK L+QAS +GHVRAQYQ ALCLH+G GV+ NLQEAARWYL+AAEGGYV
Sbjct: 172 LQAEPSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEAARWYLKAAEGGYV 231
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
RAMYN +LCYS GEGL SHR ARKWMKRAAD GH KAQ EHGLGLF+EGE +KAVVYLE
Sbjct: 232 RAMYNVALCYSVGEGLAQSHRLARKWMKRAADRGHSKAQFEHGLGLFSEGEQLKAVVYLE 291
Query: 289 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
LATRAGETAA HVKNVILQQLSATSRDR M + D+WRA+PS
Sbjct: 292 LATRAGETAAAHVKNVILQQLSATSRDRVMNLADNWRALPS 332
>gi|224102439|ref|XP_002312677.1| predicted protein [Populus trichocarpa]
gi|222852497|gb|EEE90044.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/342 (63%), Positives = 258/342 (75%), Gaps = 37/342 (10%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MKQ+TWP R R + +F ++ + + R ++S++G D
Sbjct: 1 MKQKTWPGRQY--RQSTFKFWLSSEAD----------------------FRQLRSSDG-D 35
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR-GVRK 119
F++LP D+L KIAASFTLP L+ ASLVCKSW++ LRPLREA++ L+WGKRFKHGR GVR
Sbjct: 36 FSTLPSDILTKIAASFTLPHLQTASLVCKSWSEGLRPLREALLFLKWGKRFKHGRGGVRP 95
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ------- 172
NLDKALDSFLKGA RGSTLAMVDAGL+YWE+ KK+ AI+LY++AAVLGDP+ Q
Sbjct: 96 NLDKALDSFLKGAVRGSTLAMVDAGLLYWEIGKKDKAIALYKKAAVLGDPSGQCNLGLSY 155
Query: 173 ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P+ +EAVK L+QAS +GHVRAQYQLALCLH+G G D +L EAARWYL+AAEGGYV
Sbjct: 156 LQAEPSKRKEAVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAEGGYV 215
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
RAMY +LCYS GEGL SHRQARKWMKRAAD GH AQ EHGLGLF+EGE +KAVVYLE
Sbjct: 216 RAMYRVALCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSEGEKLKAVVYLE 275
Query: 289 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 330
LAT AGETAA HVKNVILQQL ATSRD M + ++WRA+PSL
Sbjct: 276 LATHAGETAAVHVKNVILQQLPATSRDHVMNLANNWRALPSL 317
>gi|449450432|ref|XP_004142966.1| PREDICTED: F-box protein At1g70590-like isoform 1 [Cucumis sativus]
gi|449500305|ref|XP_004161061.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At1g70590-like
[Cucumis sativus]
Length = 368
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/368 (60%), Positives = 257/368 (69%), Gaps = 37/368 (10%)
Query: 1 MKQRTWPDRSTGSRFTALQFP------ITEKDNRRPELTA---SARKARIKRRSRFSCSR 51
M QRTWPDRS S F++ D+ L A S + + F+ +
Sbjct: 1 MWQRTWPDRSDASPFSSFSLSKLKAKSAIHMDDHHHNLDAYHTSRHTLSTSKSTNFTPTV 60
Query: 52 SI----------------KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDAL 95
S HDF++LP+DVL KIAASF LP LRAAS VCK+W DA
Sbjct: 61 HPSPSTSSSSQTPFWVRPSSLPSHDFSALPYDVLIKIAASFNLPNLRAASFVCKAWFDAF 120
Query: 96 RPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE 154
RPLREAM+ LRWGKRFKHGRG VR N DKAL+SFLKGAARGSTLAMVDAGL+YWEM K
Sbjct: 121 RPLREAMLFLRWGKRFKHGRGGVRPNSDKALNSFLKGAARGSTLAMVDAGLLYWEMGNKN 180
Query: 155 AAISLYRQAAVLGDPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
AI+LY++AA LGDP+A+ P N EAVK L QAS+ G++RAQYQLALCL
Sbjct: 181 DAIALYQKAADLGDPSAKCNLGISFLHAKPPNPTEAVKWLRQASVVGNIRAQYQLALCLQ 240
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+G GVD N+QEAARW+++AAEGGYVRAMYN SLCYS GEGL +H+QA+KWMKRAAD GH
Sbjct: 241 QGHGVDRNVQEAARWFIKAAEGGYVRAMYNLSLCYSCGEGLVHNHQQAKKWMKRAADRGH 300
Query: 264 GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
KAQ EHGL LF+E +MMKAVVYLELATR+GE AA HVKNVILQQLS +SRDR M V D+
Sbjct: 301 CKAQFEHGLHLFSERDMMKAVVYLELATRSGERAAGHVKNVILQQLSQSSRDRVMSVADN 360
Query: 324 WRAMPSLH 331
WR +PS H
Sbjct: 361 WRPLPSSH 368
>gi|297838865|ref|XP_002887314.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333155|gb|EFH63573.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
Length = 345
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/343 (62%), Positives = 257/343 (74%), Gaps = 14/343 (4%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASAR-KARIKRRSRFSCSRSIKSTE-G 58
MKQRTWP RS GSRFT+L F ++ +R ++ R A+ SR S S S S E G
Sbjct: 1 MKQRTWPCRSEGSRFTSLSFLKPQEKEKRTRFSSINRATAKSSTSSRSSSSSSPLSNEIG 60
Query: 59 HDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-V 117
DF+ LPFD+L KIAA F+ P L+AAS VCKSW DAL+PLRE+M+LLRWGK+FKHGRG V
Sbjct: 61 GDFSMLPFDILMKIAAPFSHPNLQAASSVCKSWRDALKPLRESMLLLRWGKKFKHGRGGV 120
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ----- 172
R NLDKALDSFLKGAARGSTLAMVDAGL+YWE +KE A+SLYR+AA LGD Q
Sbjct: 121 RANLDKALDSFLKGAARGSTLAMVDAGLVYWETGEKEKAMSLYRRAAELGDAVGQCNLGI 180
Query: 173 ------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
P+N +EA+K L Q++ G+VRAQYQLALCLH+GR V NL EA++WYL+AAEGG
Sbjct: 181 CYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHQGRVVKTNLLEASKWYLKAAEGG 240
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY 286
YVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EG M+K+V+Y
Sbjct: 241 YVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGAMLKSVLY 300
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
LELA R GE+AA H+K VI QQLSATSR + +WR +P+
Sbjct: 301 LELAERGGESAATHIKEVIHQQLSATSRGHVINQASNWRPLPA 343
>gi|356497357|ref|XP_003517527.1| PREDICTED: F-box protein At1g70590-like [Glycine max]
Length = 327
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/342 (61%), Positives = 250/342 (73%), Gaps = 29/342 (8%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHD 60
MK RTWP F++L + + R E +A AR R+ R + G +
Sbjct: 1 MKHRTWP-----RAFSSLPY------SNRSEFSA-ARSTRLCARPPPPSPPGV----GGE 44
Query: 61 FASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR-GVRK 119
F+SLP+DVL KIAASF P LRAASLVC++W +ALRPLREAMVLLRWGKRFKHGR GVR
Sbjct: 45 FSSLPYDVLAKIAASFDDPNLRAASLVCRAWCEALRPLREAMVLLRWGKRFKHGRRGVRP 104
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ------- 172
N+DKALDSF K A RGS LAMVDAGL+YWE +K A+ LY +AA LG+P+AQ
Sbjct: 105 NVDKALDSFTKAAVRGSALAMVDAGLIYWERGEKPKAMELYLKAAELGNPSAQCNLGLSY 164
Query: 173 ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGY 227
P N E+AVK L +AS+ G+VRAQYQLALCLHR G V NL+EAA+WY++AAEGGY
Sbjct: 165 LQAEPPNTEKAVKWLRKASVCGNVRAQYQLALCLHRSGGRVRSNLKEAAKWYMKAAEGGY 224
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
VRAMYN SLC+SFGEGL +H+ ARKWMKRAAD GH KAQ EHGL LF+EG+MMKAVVYL
Sbjct: 225 VRAMYNISLCFSFGEGLASNHQLARKWMKRAADRGHSKAQFEHGLALFSEGDMMKAVVYL 284
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
ELATRAGE A HVKN +L +LS+ SRD AM + +SWRA+PS
Sbjct: 285 ELATRAGEKGAAHVKNAVLHRLSSVSRDHAMHLANSWRALPS 326
>gi|18409624|ref|NP_564992.1| F-box protein [Arabidopsis thaliana]
gi|75165183|sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590
gi|14335050|gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana]
gi|27363348|gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana]
gi|332196965|gb|AEE35086.1| F-box protein [Arabidopsis thaliana]
Length = 351
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/348 (59%), Positives = 252/348 (72%), Gaps = 20/348 (5%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELT----ASARKARIKRRSRFSCSRSIKST 56
MKQRTWP RS GSRF++L F ++R ++ A+A+ R S S S S
Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG
Sbjct: 61 EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRG 120
Query: 117 -VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ--- 172
VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD Q
Sbjct: 121 GVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNL 180
Query: 173 --------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
P+N +EA+K L Q++ G+VRAQYQLALCLH GR V NL EA +WYL+AAE
Sbjct: 181 GIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAE 240
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
GGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EGEM+K+V
Sbjct: 241 GGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGEMLKSV 300
Query: 285 VYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAMP 328
+YLELA R GE AA VK V+ QQLSAT + A+ ++WR +P
Sbjct: 301 LYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPLP 348
>gi|356501969|ref|XP_003519795.1| PREDICTED: F-box protein At1g70590-like [Glycine max]
Length = 327
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/283 (67%), Positives = 225/283 (79%), Gaps = 13/283 (4%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG-RGVR 118
DF++LP+DVL KIAASF P LRAASLVC++W +ALRPLREAM LL WGKRFKHG RGV
Sbjct: 44 DFSALPYDVLAKIAASFDDPNLRAASLVCRAWCEALRPLREAMALLLWGKRFKHGHRGVG 103
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ------ 172
N D+ALDSF+K AARGS LAMVDAGL+YWE +K A+ Y +AA LG+P+AQ
Sbjct: 104 PNPDRALDSFIKAAARGSALAMVDAGLIYWERGEKPKAMEFYHKAAELGNPSAQCNLGLS 163
Query: 173 -----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGG 226
P N E AVK L++AS+ G+VRAQYQLALCLHRG G V NL+EAA+WY++AAEGG
Sbjct: 164 YLQAEPPNTELAVKWLHKASVCGNVRAQYQLALCLHRGGGRVRSNLKEAAKWYMKAAEGG 223
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY 286
YVRAMYN SLC+SFGEGL +H+ ARKWMKRAAD GH KAQ EHGL LF+EG+MMKAVVY
Sbjct: 224 YVRAMYNISLCFSFGEGLTRNHQLARKWMKRAADRGHSKAQFEHGLALFSEGDMMKAVVY 283
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
LELATRAGE A HVKN +L +LS+ SRD AM + +SWRA+PS
Sbjct: 284 LELATRAGEKGAAHVKNAVLHRLSSASRDHAMHLANSWRALPS 326
>gi|147779938|emb|CAN62303.1| hypothetical protein VITISV_023688 [Vitis vinifera]
Length = 943
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 188/287 (65%), Positives = 207/287 (72%), Gaps = 54/287 (18%)
Query: 71 KIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFL 129
KIAA+FTLP L+ ASLVC+SW D+LRPLREAM+LL+WGKRFKHG G VR N+ KALDSFL
Sbjct: 46 KIAATFTLPDLQTASLVCRSWRDSLRPLREAMLLLKWGKRFKHGHGGVRPNIQKALDSFL 105
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-----------PANAEE 178
KGAARGSTLAMVDAGL+YWEM KKE +++LYR+AA LGDP AQ P EE
Sbjct: 106 KGAARGSTLAMVDAGLIYWEMGKKEESVALYRKAAELGDPTAQCNLGISYLHSEPPKREE 165
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA----------------------- 215
A K LY +S AG+VRAQYQLALCLHRGRG+D NL EA
Sbjct: 166 AAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAPTIVKGFREWEYEMWGDNHCTKP 225
Query: 216 -------------------ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
ARWYL+AAEGGYVRAMYN SLCYS+GEGL SHRQAR+WMK
Sbjct: 226 CSPFVDAIHLVLYLSSPRQARWYLKAAEGGYVRAMYNVSLCYSYGEGLVHSHRQARRWMK 285
Query: 257 RAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKN 303
RAAD GH KAQ EHGLGLF+EGEMMKAVVYLELATRAGETAA HVKN
Sbjct: 286 RAADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATRAGETAAAHVKN 332
>gi|12324759|gb|AAG52341.1|AC011663_20 hypothetical protein; 86186-84430 [Arabidopsis thaliana]
gi|12325035|gb|AAG52462.1|AC010796_1 hypothetical protein; 68316-70072 [Arabidopsis thaliana]
Length = 364
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/361 (54%), Positives = 243/361 (67%), Gaps = 33/361 (9%)
Query: 1 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELT----ASARKARIKRRSRFSCSRSIKST 56
MKQRTWP RS GSRF++L F ++R ++ A+A+ R S S S S
Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG
Sbjct: 61 EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRG 120
Query: 117 -VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ--- 172
VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD Q
Sbjct: 121 GVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNL 180
Query: 173 --------PANAEEAVKLLYQASIAGHVRAQYQLAL-------------CLHRGRGVDFN 211
P+N +EA+K L Q++ G+VRAQYQ L + D
Sbjct: 181 GIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQHVLSSFVETDTAMFGWVIGSFVEADNA 240
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ +WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHG
Sbjct: 241 MFGHTKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHG 300
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAM 327
L LF+EGEM+K+V+YLELA R GE AA VK V+ QQLSAT + A+ ++WR +
Sbjct: 301 LALFSEGEMLKSVLYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPL 360
Query: 328 P 328
P
Sbjct: 361 P 361
>gi|302812267|ref|XP_002987821.1| hypothetical protein SELMODRAFT_46102 [Selaginella moellendorffii]
gi|300144440|gb|EFJ11124.1| hypothetical protein SELMODRAFT_46102 [Selaginella moellendorffii]
Length = 288
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 190/269 (70%), Gaps = 11/269 (4%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH 113
+ E DF+ LPFDVL +I+ F+LP L AAS+VCKSW AL LREA+ ++WGK +KH
Sbjct: 20 QGQEDVDFSQLPFDVLRRISGGFSLPNLWAASMVCKSWYQALSSLREAVTFVKWGKMYKH 79
Query: 114 GRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
GRG V ++ ALDSFLKGAARG AM+DAGL+ WE ++E I YR+AA LGD A Q
Sbjct: 80 GRGGVPQDTGMALDSFLKGAARGCAAAMIDAGLLLWEQGRREEGIQWYRKAAELGDAAGQ 139
Query: 173 ----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
P +A EAVK +AS AGHVRAQY LALCL +GRGV+ N +AARWYLRA
Sbjct: 140 CNLGLALLQEPVDASEAVKWFQRASDAGHVRAQYSLALCLQQGRGVEPNPGKAARWYLRA 199
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
AEGG RAMYNT+LC+ GEG ++ AR WM+RAA GH KAQ EHGL LF EG+
Sbjct: 200 AEGGSSRAMYNTALCFLSGEGFARNYHHARHWMRRAALAGHRKAQFEHGLTLFAEGDGGL 259
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSA 311
A+ +LELATRAGETAA H+++ ++QQL A
Sbjct: 260 ALAFLELATRAGETAAIHIRDALVQQLPA 288
>gi|302821222|ref|XP_002992275.1| hypothetical protein SELMODRAFT_46104 [Selaginella moellendorffii]
gi|300139925|gb|EFJ06656.1| hypothetical protein SELMODRAFT_46104 [Selaginella moellendorffii]
Length = 288
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 189/269 (70%), Gaps = 11/269 (4%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH 113
+ E DF+ LPFDVL +I+ F+LP L AAS+VCKSW AL LREA+ ++WGK +KH
Sbjct: 20 QGQEDVDFSQLPFDVLRRISGGFSLPNLWAASMVCKSWYQALSSLREAVTFVKWGKMYKH 79
Query: 114 GRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
GRG V ++ ALDSFLKGAARG AM+DAGL+ WE ++E I YR+AA LGD A Q
Sbjct: 80 GRGGVPQDTGMALDSFLKGAARGCAAAMIDAGLLLWEQGRREEGIQWYRKAAELGDVAGQ 139
Query: 173 ----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
P +A EAVK A+ AGHVRAQY LALCL +GRGV+ N +AARWYLRA
Sbjct: 140 CNLGLALLQEPVDASEAVKWFQTAADAGHVRAQYSLALCLQQGRGVEPNPGKAARWYLRA 199
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
AEGG RAMYNT+LC+ GEG ++ AR WM+RAA GH KAQ EHGL LF EG+
Sbjct: 200 AEGGSSRAMYNTALCFLSGEGFARNYHHARHWMRRAALAGHRKAQFEHGLTLFAEGDGGL 259
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSA 311
A+ +LELATRAGETAA H+++ ++QQL A
Sbjct: 260 ALAFLELATRAGETAAIHIRDALVQQLPA 288
>gi|296083414|emb|CBI23367.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/193 (75%), Positives = 159/193 (82%), Gaps = 11/193 (5%)
Query: 150 MDKKEAAISLYRQAAVLGDPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQL 198
M KKE +I+LYR+AA LGDP AQ P EEA K LY +S AG+VRAQYQL
Sbjct: 1 MGKKEESIALYRKAAELGDPTAQCNLGISYLHSEPPKREEAAKWLYLSSNAGYVRAQYQL 60
Query: 199 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
ALCLHRGRG+D NL EAARWYL+AAEGGYVRAMYN SLCYS+GEGL SHRQAR+WMKRA
Sbjct: 61 ALCLHRGRGMDRNLPEAARWYLKAAEGGYVRAMYNVSLCYSYGEGLVHSHRQARRWMKRA 120
Query: 259 ADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
AD GH KAQ EHGLGLF+EGEMMKAVVYLELATRAGETAA HVKNVILQQLS TSRDRAM
Sbjct: 121 ADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATRAGETAAAHVKNVILQQLSVTSRDRAM 180
Query: 319 LVVDSWRAMPSLH 331
L+ D+WRA+P+ H
Sbjct: 181 LLADNWRALPTSH 193
>gi|357485699|ref|XP_003613137.1| F-box protein [Medicago truncatula]
gi|355514472|gb|AES96095.1| F-box protein [Medicago truncatula]
Length = 393
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 196/287 (68%), Gaps = 27/287 (9%)
Query: 2 KQRTWPDRSTGSRFTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDF 61
+TWP S+ S FT+L P +R R S S S +T DF
Sbjct: 3 NNQTWPCTSSSSPFTSLPLP---------------SPSRSIRLCSSSSSSSSSTTSSTDF 47
Query: 62 ASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG-RGVRKN 120
+SLP+D+L KI+ASF P L +ASLVC+SW +ALRPLREAMV+L WGKR KHG RGVRKN
Sbjct: 48 SSLPYDILTKISASFDHPNLESASLVCRSWCEALRPLREAMVMLMWGKRLKHGKRGVRKN 107
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------- 172
+KAL+ F K AA+GS LAMVDAGL++WE +K+ A+ Y AA LG+ +AQ
Sbjct: 108 TEKALEMFTKAAAKGSALAMVDAGLIHWEKGEKDKALDFYLMAAHLGNASAQCNLGISYL 167
Query: 173 ---PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P N E+A+K LY+AS G++RAQYQLALCLHR G N++EA +WY++AAEGGY+R
Sbjct: 168 QVEPPNTEQALKWLYKASEGGNIRAQYQLALCLHRAGGNRSNIREAVKWYMKAAEGGYMR 227
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
AMYN SLCYSFGEG+ +H+ ARKWMKRAAD GH KAQ EHGL L++
Sbjct: 228 AMYNISLCYSFGEGMARNHQIARKWMKRAADRGHTKAQFEHGLALYS 274
>gi|167999410|ref|XP_001752410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696310|gb|EDQ82649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/256 (56%), Positives = 177/256 (69%), Gaps = 10/256 (3%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDK 123
LPFDVL +IA SF+ L A+ CK+WN AL PLRE M+ L +GK+FKHG V KNLDK
Sbjct: 1 LPFDVLQRIAGSFSWHDLWNATCTCKTWNKALAPLREGMLFLHYGKKFKHGHEVSKNLDK 60
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAA---------QPA 174
AL F KGA RG AMVDAGL+ WEM +++ I+ Y+QAA L PA Q +
Sbjct: 61 ALQMFTKGAIRGCAAAMVDAGLLLWEMGRRDEGINWYKQAAELRHPAGMCNLGLAYLQDS 120
Query: 175 N-AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N EAVK L A+ AGHVRAQY LALCL +G+GV+ N+Q+AARWYL+AAEGG R MYN
Sbjct: 121 NRLVEAVKWLKIAATAGHVRAQYSLALCLQQGKGVECNMQKAARWYLQAAEGGSTRGMYN 180
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 293
+LC GEG + +A++WM+RAA GH KAQ E GL LF EGE A+V+LELATRA
Sbjct: 181 VALCLRSGEGFSRNLYEAKRWMRRAAVAGHSKAQFEFGLTLFAEGEGGSALVFLELATRA 240
Query: 294 GETAADHVKNVILQQL 309
GET A H+++ +L QL
Sbjct: 241 GETGATHIRDALLVQL 256
>gi|224106137|ref|XP_002333720.1| predicted protein [Populus trichocarpa]
gi|222837996|gb|EEE76361.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/166 (72%), Positives = 137/166 (82%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+ AA+P+ +E VK L+QAS +GHVRAQYQLALCLH+G G D +L EAARWYL+AAE
Sbjct: 2 VIKGRAAEPSKRKEVVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAE 61
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
GGYVRAMY +LCYS GEGL SHRQARKWMKRAAD GH AQ EHGLGLF+EGE +KAV
Sbjct: 62 GGYVRAMYRVALCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSEGEKLKAV 121
Query: 285 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 330
VYLELAT AGETAA HVKNVILQQL ATSRD M + ++WRA+PSL
Sbjct: 122 VYLELATHAGETAAVHVKNVILQQLPATSRDHVMNLANNWRALPSL 167
>gi|413918654|gb|AFW58586.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 386
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 181/300 (60%), Gaps = 29/300 (9%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ +G DF++LP D++++ A+ + AAS C++W DALRPLREA L +G+R KH
Sbjct: 77 TPQGADFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKHD 136
Query: 115 ------------------RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
V +AL F + A GS AMVDAGLM WE ++E A
Sbjct: 137 PVTGARAVAAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEA 196
Query: 157 ISLYRQAAVLGDP-----------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
+ YR AA LG P A P AEEA++ Y ++ AG+ RAQY L LCL G
Sbjct: 197 VGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNG 256
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+GV N +EAA+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH K
Sbjct: 257 KGVKRNQKEAAKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLAADCGHKK 316
Query: 266 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
A E G+ L G+ +K ++YLELATR GE AA H+++VIL+ LS + RAM D W+
Sbjct: 317 ALYECGIKLCAAGDKVKCLMYLELATRRGEAAAAHMRDVILESLSVVNAQRAMSDADKWK 376
>gi|195653363|gb|ACG46149.1| sel1-like repeat [Zea mays]
Length = 358
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 181/300 (60%), Gaps = 29/300 (9%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH- 113
+ +G DF++LP D++++ A+ + AAS C++W DALRPLREA L +G+R KH
Sbjct: 49 TPQGADFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKHD 108
Query: 114 -----------------GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
G V +AL F + A GS AMVDAGLM WE ++E A
Sbjct: 109 PVTGARAVPAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEA 168
Query: 157 ISLYRQAAVLGDP-----------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
+ YR AA LG P A P AEEA++ Y ++ AG+ RAQY L LCL G
Sbjct: 169 VGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNG 228
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+GV N +EAA+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH K
Sbjct: 229 KGVKRNQKEAAKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLAADCGHKK 288
Query: 266 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
A E G+ L G+ +K ++YLELATR GE AA H+++VIL+ LS + AM D W+
Sbjct: 289 ALYECGIKLCAAGDKVKCLMYLELATRRGEAAAAHMRDVILESLSVVNAQLAMSDADKWK 348
>gi|449450434|ref|XP_004142967.1| PREDICTED: F-box protein At1g70590-like isoform 2 [Cucumis sativus]
Length = 314
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 162/264 (61%), Gaps = 37/264 (14%)
Query: 1 MKQRTWPDRSTGSRFTALQFP------ITEKDNRRPELTA---SARKARIKRRSRFSCSR 51
M QRTWPDRS S F++ D+ L A S + + F+ +
Sbjct: 1 MWQRTWPDRSDASPFSSFSLSKLKAKSAIHMDDHHHNLDAYHTSRHTLSTSKSTNFTPTV 60
Query: 52 SI----------------KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDAL 95
S HDF++LP+DVL KIAASF LP LRAAS VCK+W DA
Sbjct: 61 HPSPSTSSSSQTPFWVRPSSLPSHDFSALPYDVLIKIAASFNLPNLRAASFVCKAWFDAF 120
Query: 96 RPLREAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE 154
RPLREAM+ LRWGKRFKHGR GVR N DKAL+SFLKGAARGSTLAMVDAGL+YWEM K
Sbjct: 121 RPLREAMLFLRWGKRFKHGRGGVRPNSDKALNSFLKGAARGSTLAMVDAGLLYWEMGNKN 180
Query: 155 AAISLYRQAAVLGDPA-----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
AI+LY++AA LGDP+ A+P N EAVK L QAS+ G++RAQYQLALCL
Sbjct: 181 DAIALYQKAADLGDPSAKCNLGISFLHAKPPNPTEAVKWLRQASVVGNIRAQYQLALCLQ 240
Query: 204 RGRGVDFNLQEAARWYLRAAEGGY 227
+G GVD N+QEA ++L Y
Sbjct: 241 QGHGVDRNVQEAVCYFLLPISFAY 264
>gi|357164147|ref|XP_003579964.1| PREDICTED: F-box protein At1g70590-like [Brachypodium distachyon]
Length = 352
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 186/293 (63%), Gaps = 19/293 (6%)
Query: 52 SIKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRF 111
+ S G DF++LP +++++ ++ + AAS C++W +AL+PLREA L G+R
Sbjct: 52 ATTSGSGADFSALPPELVHRALSASAATDVAAASRACRAWRNALQPLREAAALHAHGRRL 111
Query: 112 KHGR------GVRKNLDK--ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
KHG G ++++ + AL F + A GS AMVDAGLM WE ++ A+ Y++A
Sbjct: 112 KHGPTTSGCDGEKRDVSRQSALGLFQRAAQLGSAAAMVDAGLMCWEEGQRGKAVGYYQRA 171
Query: 164 AVLGDPA-----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
A LG P A P AEEAV+ Y A+ AG+VRAQY L LCL G+G+ N
Sbjct: 172 AELGHPVGMCNLGVSYLEADPPEAEEAVRWFYPAASAGNVRAQYNLGLCLQNGKGIKRNQ 231
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+EAA+WYLRAAEGG VRAMYN SLCYSFGEG +A+KW++ AA+CGH KA E G+
Sbjct: 232 REAAKWYLRAAEGGNVRAMYNVSLCYSFGEGFTHDPVRAKKWLQLAAECGHRKALYECGI 291
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
L G+ +++++YLELATR GET A H+++VIL+ LS + RA+ D WR
Sbjct: 292 KLCAAGDKVRSLMYLELATRRGETDASHMRDVILESLSVVNAQRALSDADKWR 344
>gi|242073446|ref|XP_002446659.1| hypothetical protein SORBIDRAFT_06g019990 [Sorghum bicolor]
gi|241937842|gb|EES10987.1| hypothetical protein SORBIDRAFT_06g019990 [Sorghum bicolor]
Length = 357
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 180/291 (61%), Gaps = 25/291 (8%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L +G+R KHG
Sbjct: 59 DFSALPPELVHRALAAACASDVAAASRACRAWRDALRPLREAAALHAFGRRVKHGLVAGP 118
Query: 115 ---------RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+ +AL F + A GS AMVDAGLM WE ++E A+ YR AA
Sbjct: 119 ASSRGGAGGGRLETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEAVGYYRSAAD 178
Query: 166 LGDPA-----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
LG P A P AEEA++ Y ++ AG+ RAQY L LCL G+GV + +E
Sbjct: 179 LGHPVGMCNLGVSFLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNGKGVKRSQKE 238
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH KA E G+ L
Sbjct: 239 AAKWYLRAAEGGNVRAMYNISLCYSYGEGLSQDPVRAKRWLQLAADCGHKKALYECGIKL 298
Query: 275 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
G+ +K+++YLELATR GE AA H+++VI + LS ++ RAM D W+
Sbjct: 299 CAAGDKVKSLMYLELATRRGEYAAAHMRDVIFESLSVVNKQRAMSDADKWK 349
>gi|116310297|emb|CAH67315.1| OSIGBa0106G07.11 [Oryza sativa Indica Group]
Length = 385
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 179/286 (62%), Gaps = 20/286 (6%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L G+R KH
Sbjct: 92 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAA 151
Query: 115 ----RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
G + +AL F + A GS AMVDAGLM WE +++ A+ Y++AA LG P
Sbjct: 152 AAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPV 211
Query: 171 -----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
A P AEEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WY
Sbjct: 212 GMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWY 271
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
LRAAEGG VRAMYN SLCY++GEG ++++W++ AADCGH KA E G+ L G+
Sbjct: 272 LRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGD 331
Query: 280 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+++++YLELATR GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 332 KVRSLMYLELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWR 377
>gi|218195049|gb|EEC77476.1| hypothetical protein OsI_16304 [Oryza sativa Indica Group]
Length = 313
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 179/286 (62%), Gaps = 20/286 (6%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L G+R KH
Sbjct: 20 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAA 79
Query: 115 ----RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
G + +AL F + A GS AMVDAGLM WE +++ A+ Y++AA LG P
Sbjct: 80 AAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPV 139
Query: 171 -----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
A P AEEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WY
Sbjct: 140 GMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWY 199
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
LRAAEGG VRAMYN SLCY++GEG ++++W++ AADCGH KA E G+ L G+
Sbjct: 200 LRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGD 259
Query: 280 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+++++YLELATR GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 260 KVRSLMYLELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWR 305
>gi|297602909|ref|NP_001053077.2| Os04g0476000 [Oryza sativa Japonica Group]
gi|38344482|emb|CAE05497.2| OSJNBa0022H21.17 [Oryza sativa Japonica Group]
gi|255675552|dbj|BAF14991.2| Os04g0476000 [Oryza sativa Japonica Group]
Length = 381
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 179/286 (62%), Gaps = 20/286 (6%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG----- 114
DF++LP +++++ A+ + AAS C++W DALRPLREA L G+R KH
Sbjct: 88 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAA 147
Query: 115 ----RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
G + +AL F + A GS AMVDAGLM WE +++ A+ Y++AA LG P
Sbjct: 148 AAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPV 207
Query: 171 -----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
A P AEEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WY
Sbjct: 208 GMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWY 267
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
LRAAEGG VRAMYN SLCY++GEG ++++W++ AADCGH KA E G+ L G+
Sbjct: 268 LRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGD 327
Query: 280 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+++++YLELATR GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 328 KVRSLMYLELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWR 373
>gi|413948553|gb|AFW81202.1| hypothetical protein ZEAMMB73_789698 [Zea mays]
Length = 199
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 112/161 (69%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+L AA P AEEA++ Y ++ AG+ RAQY L LCL G+GV N +EAA+WYLRAAE
Sbjct: 29 LLNVSAADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNGKGVKQNQKEAAKWYLRAAE 88
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
GG VRAMYN SLCYS+GEGL +A++W++ AADCGH KA E G+ L G+ +K
Sbjct: 89 GGNVRAMYNISLCYSYGEGLGQDPVRAKRWLQLAADCGHKKALYECGIKLCAAGDKVKCF 148
Query: 285 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+YLELATR GE AA H+++VIL+ LS + RAM D W+
Sbjct: 149 MYLELATRRGEAAAAHMRDVILESLSVVNAQRAMSDADKWK 189
>gi|224165199|ref|XP_002338784.1| predicted protein [Populus trichocarpa]
gi|222873458|gb|EEF10589.1| predicted protein [Populus trichocarpa]
Length = 119
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/118 (68%), Positives = 94/118 (79%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+ AA+P+ +E VK L+QAS +GHVRAQYQLALCLH+G G D +L EAARWYL+AAE
Sbjct: 2 VIKGRAAEPSKRKEVVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEAARWYLKAAE 61
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
GGYVRAMY +LCYS GEGL SHRQARKWMKRAAD GH AQ EHGLGLF++ + K
Sbjct: 62 GGYVRAMYRVALCYSVGEGLAQSHRQARKWMKRAADRGHSNAQYEHGLGLFSDRQCRK 119
>gi|222629053|gb|EEE61185.1| hypothetical protein OsJ_15178 [Oryza sativa Japonica Group]
Length = 187
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 109/153 (71%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P AEEAV+ Y A+ AG+ RAQY L LCL G+G+ N +EAA+WYLRAAEGG VRAMY
Sbjct: 27 PPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWYLRAAEGGNVRAMY 86
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 292
N SLCY++GEG ++++W++ AADCGH KA E G+ L G+ +++++YLELATR
Sbjct: 87 NISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGDKVRSLMYLELATR 146
Query: 293 AGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
GE AA H+++VIL+ LS + RA+ D WR
Sbjct: 147 RGEAAASHMRDVILESLSLVNAQRALSDADKWR 179
>gi|293333051|ref|NP_001169731.1| uncharacterized protein LOC100383612 [Zea mays]
gi|224031245|gb|ACN34698.1| unknown [Zea mays]
Length = 122
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 80/110 (72%)
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ AADCGH KA E G+ L
Sbjct: 3 AKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLAADCGHKKALYECGIKLC 62
Query: 276 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
G+ +K ++YLELATR GE AA H+++VIL+ LS + RAM D W+
Sbjct: 63 AAGDKVKCLMYLELATRRGEAAAAHMRDVILESLSVVNAQRAMSDADKWK 112
>gi|413918655|gb|AFW58587.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 102/193 (52%), Gaps = 29/193 (15%)
Query: 54 KSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH 113
+ +G DF++LP D++++ A+ + AAS C++W DALRPLREA L +G+R KH
Sbjct: 76 PTPQGADFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKH 135
Query: 114 G------------------RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA 155
V +AL F + A GS AMVDAGLM WE ++E
Sbjct: 136 DPVTGARAVAAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREE 195
Query: 156 AISLYRQAAVLGDP-----------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
A+ YR AA LG P A P AEEA++ Y ++ AG+ RAQY L LCL
Sbjct: 196 AVGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQN 255
Query: 205 GRGVDFNLQEAAR 217
G+GV N +EA R
Sbjct: 256 GKGVKRNQKEAVR 268
>gi|424845481|ref|ZP_18270092.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363986919|gb|EHM13749.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 365
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAA 171
GV ++ KA++ F K A G + A LMY E D AI Y +AA+ G+ A
Sbjct: 51 GVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDA 110
Query: 172 Q-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
Q P + +A++ +A++AG+ AQ+ LAL G GV + +A +W
Sbjct: 111 QFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQW 170
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
Y +AAE G V A YN +L Y GEG+P + +W +AA+ G+GKAQ L ++ EG
Sbjct: 171 YTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLAL-MYDEG 229
Query: 279 EMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
E + KA+ + A AG A V+ D+A V
Sbjct: 230 EGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAV 276
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E + K A+ Y +AA
Sbjct: 118 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAEN 177
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ P + + ++ +A+ AG+ +AQ+ LAL G GV +
Sbjct: 178 GNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKA 237
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LE 269
+A WY +AAE G +A +N ++ Y GEG+P QA KW AA+ G AQ +
Sbjct: 238 KAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAVKWYTAAAESGLFSAQYNLAIM 297
Query: 270 HGLGLFTEGEMMKAVVY 286
H G T+ ++ KA +
Sbjct: 298 HKNGEGTDKDLAKAYYW 314
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV + KA+ + K A G+ A + LMY E + K I Y +AA
Sbjct: 154 YDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEA 213
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ P + +A++ +A+ AG+ +AQ+ LA+ G GV +
Sbjct: 214 GNGKAQFNLALMYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKA 273
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+A +WY AAE G A YN ++ + GEG +A W RA
Sbjct: 274 QAVKWYTAAAESGLFSAQYNLAIMHKNGEGTDKDLAKAYYWACRA 318
>gi|260654118|ref|ZP_05859608.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
gi|260631103|gb|EEX49297.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
Length = 455
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E + K A+ Y +AA
Sbjct: 136 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAEN 195
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ P + +AV+ +A+ G+V AQY LAL G GV +
Sbjct: 196 GNVGAQYNLALMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPEDDA 255
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +AAE G V A YN +L Y GEG+P + +W +AA+ G+GKAQ L
Sbjct: 256 KAVMWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLAL- 314
Query: 274 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
++ EGE + KA+ + A AG A V+ D+A V
Sbjct: 315 MYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAV 366
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA++ + K A G+T A + LMY E D AI Y +AA+
Sbjct: 100 YDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALA 159
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ P + +AV+ +A+ G+V AQY LAL G GV +
Sbjct: 160 GNTDAQFNLALMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPVDKA 219
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A +WY +AAE G V A YN +L Y GEG+P +A W +AA+ G+ AQ L
Sbjct: 220 KAVQWYTKAAENGNVGAQYNLALMYDEGEGVPEDDAKAVMWYTKAAENGNVGAQYNLAL- 278
Query: 274 LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
++ EGE + K + + A AG A ++ + +D+A +
Sbjct: 279 MYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKAKAI 330
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPAN 175
GV ++ KA++ F K A G + A LMY E D P +
Sbjct: 69 GVTEDKAKAIEWFTKAAEAGQSDAQYGLALMYDEGD-------------------GVPED 109
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
+A++ +A++AG+ AQ+ LAL G GV + +A WY +AA G A +N +
Sbjct: 110 NAKAIEWYTKAALAGNTDAQFNLALMYDEGDGVPEDNAKAIEWYTKAALAGNTDAQFNLA 169
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELA 290
L Y GEG+P+ +A +W +AA+ G+ AQ L ++ EGE + KAV + A
Sbjct: 170 LMYDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLAL-MYDEGEGVPVDKAKAVQWYTKA 228
Query: 291 TRAGETAADHVKNVILQQLSATSRDRAMLVV 321
G A + ++ + D A V+
Sbjct: 229 AENGNVGAQYNLALMYDEGEGVPEDDAKAVM 259
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV + KA+ + K A G+ A + LMY E + A+ Y +AA
Sbjct: 208 YDEGEGVPVDKAKAVQWYTKAAENGNVGAQYNLALMYDEGEGVPEDDAKAVMWYTKAAEN 267
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ P + + ++ +A+ AG+ +AQ+ LAL G GV +
Sbjct: 268 GNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEAGNGKAQFNLALMYDEGEGVPQDKA 327
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LE 269
+A WY +AAE G +A +N ++ Y GEG+P QA KW AA+ G AQ +
Sbjct: 328 KAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKAQAVKWYTAAAESGLFSAQYNLAIM 387
Query: 270 HGLGLFTEGEMMKAVVY 286
H G T+ ++ KA +
Sbjct: 388 HKNGEGTDKDLAKAYYW 404
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV ++ KA+ + K A G+ A + LMY E + K I Y +AA
Sbjct: 244 YDEGEGVPEDDAKAVMWYTKAAENGNVGAQYNLALMYDEGEGVPQDKAKVIEWYTKAAEA 303
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ P + +A++ +A+ AG+ +AQ+ LA+ G GV +
Sbjct: 304 GNGKAQFNLALMYDEGEGVPQDKAKAIEWYTKAAEAGNGKAQFNLAVMYDDGEGVPEDKA 363
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+A +WY AAE G A YN ++ + GEG +A W RA
Sbjct: 364 QAVKWYTAAAESGLFSAQYNLAIMHKNGEGTDKDLAKAYYWACRA 408
>gi|449108565|ref|ZP_21745207.1| polymorphic outer membrane protein [Treponema denticola ATCC 33520]
gi|448961366|gb|EMB42071.1| polymorphic outer membrane protein [Treponema denticola ATCC 33520]
Length = 793
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
+ +G+GV KN A+D + K +G+ A + G+MY+ +DK E A LY++AA
Sbjct: 124 YDNGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYEKAFELYKKAAEQ 183
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ N EA+K +A+ GHV AQ L + G GVD N +
Sbjct: 184 GNAYAQNNLGYMYENGEGVEKNTSEAIKWYTKAAKQGHVYAQSNLGDMYYDGNGVDKNYK 243
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A WY +AAE GY A Y+ YS GEG+ + +A KW +AAD G AQ
Sbjct: 244 QALEWYTKAAEQGYSYAQYSLGFMYSNGEGVEKNTSEAIKWYTKAADQGVANAQ 297
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV KN +A+ + K A +G A G + ++ A ++Y AA G
Sbjct: 265 GFMYSNGEGVEKNTSEAIKWYTKAADQGVANAQDSLGWICEVREEYNKAAAMYLMAAQQG 324
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
Q + ++A++ +++ GH AQ L + G GVD N ++
Sbjct: 325 HANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYYNGYGVDKNYKQ 384
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A WY ++AE G+ A Y+ Y G+G ++A +W ++A+ GH AQ G +
Sbjct: 385 ALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGY-M 443
Query: 275 FTEGEMMK 282
+ G+ +K
Sbjct: 444 YENGKGVK 451
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV K+ +AL+ + K A +G A + G MY+
Sbjct: 333 GRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYY------------------- 373
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N ++A++ +++ GH AQY L G+G + ++A WY ++AE G+
Sbjct: 374 NGYGVDKNYKQALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGH 433
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A N Y G+G+ + + A W K+A + H A+
Sbjct: 434 AYAQNNLGYMYENGKGVKIDYDTAISWFKKAVENKHPDAE 473
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ L +C G+GV+ N A Y +A E G +A N + Y G G+ S+
Sbjct: 112 GNANAQNALGVCYDNGQGVEKNYTIAIDLYKKAIEQGNAKAQNNLGVMYYNGHGVDKSYE 171
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+A + K+AA+ G+ AQ G ++ GE
Sbjct: 172 KAFELYKKAAEQGNAYAQNNLGY-MYENGE 200
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ AQY L G GV+ + ++A W+ + A+ G A +CY G+G+ ++
Sbjct: 75 GGNSEAQYLLGKRYSDGDGVEKDYKKAFEWFKKGADQGNANAQNALGVCYDNGQGVEKNY 134
Query: 249 RQARKWMKRAADCGHGKAQLEHGL 272
A K+A + G+ KAQ G+
Sbjct: 135 TIAIDLYKKAIEQGNAKAQNNLGV 158
>gi|117925293|ref|YP_865910.1| Sel1 domain-containing protein [Magnetococcus marinus MC-1]
gi|117609049|gb|ABK44504.1| Sel1 domain protein repeat-containing protein [Magnetococcus
marinus MC-1]
Length = 831
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV K+ +A+ + K A +G A + G+MY D KEA + YR+
Sbjct: 421 GVMYNNGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVTKDAKEA-VKWYRK 479
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ +A+EAVK +A+ GH RAQ L + + G GV
Sbjct: 480 AAEQGQAEAQNDLGVMYDKGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGVMYNNGEGVT 539
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EA +WY +AAE G A +N Y GEG+ ++A KW ++AA+ G KAQ
Sbjct: 540 KDAKEAVKWYRKAAEQGQAEAQHNLGFMYDKGEGVTKDAKEAVKWYRKAAEQGQAKAQ-- 597
Query: 270 HGLG-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
H LG ++ GE + +AV + + GE A H V+ ++D
Sbjct: 598 HNLGVMYNNGEGVTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEGVTKD 649
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 25/218 (11%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
V G + G+GV K+ +A+ F K A +G A + G+MY DK E
Sbjct: 308 VQFNLGVMYDKGQGVTKDAKEAVKWFRKSAEQGYAQAQHNLGVMY---DKGEGVTK---- 360
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
+A+EAVK +++ GH +AQ+ L + +G+GV + +EA +W+ ++
Sbjct: 361 ------------DAKEAVKWFRKSAEQGHAQAQHNLGVMYDKGQGVTKDAKEAVKWFRKS 408
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM- 281
AE G+ +A +N + Y+ GEG+ ++A KW ++AA+ GH +AQ G+ ++ GE +
Sbjct: 409 AEQGHAQAQHNLGVMYNNGEGVTKDAKEAVKWYRKAAEQGHARAQNNLGV-MYNNGEGVT 467
Query: 282 ----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+AV + A G+ A + V+ + ++D
Sbjct: 468 KDAKEAVKWYRKAAEQGQAEAQNDLGVMYDKGEGVTKD 505
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G GV K+ +A+ + K A +G A + G MY DK E A+ Y
Sbjct: 529 GVMYNNGEGVTKDAKEAVKWYRKAAEQGQAEAQHNLGFMY---DKGEGVTKDAKEAVKWY 585
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G AQ +A+EAVK +++ G +AQ+ L + + G G
Sbjct: 586 RKAAEQGQAKAQHNLGVMYNNGEGVTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEG 645
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +EA +W+ ++AE G A N Y GEG+ ++A KW+++AA+ GH AQ
Sbjct: 646 VTKDAKEAVKWFRKSAEQGEAEAQNNLGFMYDNGEGVTKDAKEAVKWLRKAAEQGHANAQ 705
Query: 268 L----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ +G + +AV + + G+ A + V+ + ++D
Sbjct: 706 AFLGQSYDVGYGVTKDAKEAVKWYRKSAEQGQAEAQNNLGVMYDKGQGVTKD 757
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV K+ +A+ F K A +G A + G+MY D KEA + +R+
Sbjct: 601 GVMYNNGEGVTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEGVTKDAKEA-VKWFRK 659
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G+ AQ +A+EAVK L +A+ GH AQ L G GV
Sbjct: 660 SAEQGEAEAQNNLGFMYDNGEGVTKDAKEAVKWLRKAAEQGHANAQAFLGQSYDVGYGVT 719
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EA +WY ++AE G A N + Y G+G+ ++A KW ++AA+ G +AQ
Sbjct: 720 KDAKEAVKWYRKSAEQGQAEAQNNLGVMYDKGQGVTKDAKEAVKWYRKAAEQGDARAQFN 779
Query: 270 HG 271
G
Sbjct: 780 LG 781
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K +A++ R EA G + +G GV K+ +A+ F K A +G A
Sbjct: 610 VTKDAKEAVKWFRKSAEQGEAKAQHNLGVMYNNGEGVTKDAKEAVKWFRKSAEQGEAEAQ 669
Query: 141 VDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKL 182
+ G MY D KE A+ R+AA G AQ +A+EAVK
Sbjct: 670 NNLGFMYDNGEGVTKDAKE-AVKWLRKAAEQGHANAQAFLGQSYDVGYGVTKDAKEAVKW 728
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+++ G AQ L + +G+GV + +EA +WY +AAE G RA +N Y GE
Sbjct: 729 YRKSAEQGQAEAQNNLGVMYDKGQGVTKDAKEAVKWYRKAAEQGDARAQFNLGDKYDKGE 788
Query: 243 GLPLSHRQARKWMKRAADCG 262
G+ ++A KW ++AA+ G
Sbjct: 789 GVTKDAKEAVKWYRKAAEQG 808
>gi|39997985|ref|NP_953936.1| SEL1 repeat-containing protein [Geobacter sulfurreducens PCA]
gi|409913341|ref|YP_006891806.1| SEL1 repeat-containing protein [Geobacter sulfurreducens KN400]
gi|39984930|gb|AAR36286.1| SEL1 repeat-containing protein [Geobacter sulfurreducens PCA]
gi|298506926|gb|ADI85649.1| SEL1 repeat-containing protein [Geobacter sulfurreducens KN400]
Length = 245
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 19/164 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G+ + +GRGV +N AL +LK A +G +A G MY+ + ++L
Sbjct: 95 RIGEMYDNGRGVEENPVTALSWYLKAAEQGMAIAQFKVGDMYYTGKGVKQDVAL------ 148
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
VK L QA+ G++RAQY++A GR + ++ EAA+WYLRAAE
Sbjct: 149 -------------GVKWLQQAAKMGNIRAQYEIATMYETGRELKKDISEAAKWYLRAAEQ 195
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
G+ RA Y +L + GEG+ +A KW+++AA+ GH KAQ++
Sbjct: 196 GHSRAQYTIALLFLKGEGVRQDRAEAVKWLRKAAEGGHTKAQMD 239
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 155 AAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A + YR + + P N +EA+K ++A+ G +AQ+++ GRGV+ N
Sbjct: 53 GAQACYRIGTLYDNGFGVPENKQEALKWYHKAADLGLDQAQHRIGEMYDNGRGVEENPVT 112
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A WYL+AAE G A + Y G+G+ KW+++AA G+ +AQ E
Sbjct: 113 ALSWYLKAAEQGMAIAQFKVGDMYYTGKGVKQDVALGVKWLQQAAKMGNIRAQYEIATMY 172
Query: 275 FTEGEMMKAVV-----YLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
T E+ K + YL A + G + A + ++ + +DRA V
Sbjct: 173 ETGRELKKDISEAAKWYLRAAEQ-GHSRAQYTIALLFLKGEGVRQDRAEAV 222
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +A Y++ G GV N QEA +WY +AA+ G +A + Y G G+ +
Sbjct: 52 GGAQACYRIGTLYDNGFGVPENKQEALKWYHKAADLGLDQAQHRIGEMYDNGRGVEENPV 111
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADH 300
A W +AA+ G AQ + G ++ G+ +K V +L+ A + G A +
Sbjct: 112 TALSWYLKAAEQGMAIAQFKVG-DMYYTGKGVKQDVALGVKWLQQAAKMGNIRAQY 166
>gi|84394204|ref|ZP_00992934.1| hypothetical protein V12B01_19651 [Vibrio splendidus 12B01]
gi|84375186|gb|EAP92103.1| hypothetical protein V12B01_19651 [Vibrio splendidus 12B01]
Length = 942
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 27/240 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGV ++ ++++ + K A +G A + G MY E D KEA +S Y++
Sbjct: 120 GWMYDEGRGVSQDYEESVSWYRKAAEQGYARAQTNLGWMYKEGRGISQDDKEA-VSWYKK 178
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ +AQ + +EAV +A+ G+ RAQ L GRGV
Sbjct: 179 AAEQGEASAQNNLGWMYDEGRGVSQDDKEAVSWYRKAAEQGYARAQTNLGWMYENGRGVS 238
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EA WY +AAE GYVRA N Y G G+ L +++A W ++AA+ GH +AQ
Sbjct: 239 QDDKEAVSWYRKAAEQGYVRAQTNLGWMYEKGIGVSLDNKEAVSWYRKAAEQGHARAQNN 298
Query: 270 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G+ ++ EG + +AV + A G A + V+ ++ S++ V SW
Sbjct: 299 LGV-MYEEGRGVSQDYKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQNDKEAV--SW 355
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ GRGV ++ +A+ + K A +G+ A + G+MY + + KEA +S YR+
Sbjct: 300 GVMYEEGRGVSQDYKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQNDKEA-VSWYRK 358
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ N +EAV +A+ G AQ L + G GV
Sbjct: 359 AAEQGNATAQNNLGVMYEKGRGVSQNDKEAVSWYRKAAEQGDASAQNNLGIMYDEGTGVS 418
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+EA WY +AAE GY RA N Y+ G G+ +++A W ++AA+ G+ +AQ +
Sbjct: 419 QGDKEAVSWYRQAAEQGYARAQTNLGWMYADGTGVSQDYKEAVSWYQKAAEQGYARAQTK 478
Query: 270 HGLGLFTEG 278
G ++ EG
Sbjct: 479 LGW-MYVEG 486
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
SW EA G + GRGV ++ +A+ + K A +G A + G MY
Sbjct: 174 SWYKKAAEQGEASAQNNLGWMYDEGRGVSQDDKEAVSWYRKAAEQGYARAQTNLGWMYEN 233
Query: 150 -----MDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGH 191
D KEA +S YR+AA G AQ + +EAV +A+ GH
Sbjct: 234 GRGVSQDDKEA-VSWYRKAAEQGYVRAQTNLGWMYEKGIGVSLDNKEAVSWYRKAAEQGH 292
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
RAQ L + GRGV + +EA WY +AAE G A N + Y G G+ + ++A
Sbjct: 293 ARAQNNLGVMYEEGRGVSQDYKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVSQNDKEA 352
Query: 252 RKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVIL 306
W ++AA+ G+ AQ G+ ++ +G + +AV + A G+ +A + ++
Sbjct: 353 VSWYRKAAEQGNATAQNNLGV-MYEKGRGVSQNDKEAVSWYRKAAEQGDASAQNNLGIMY 411
Query: 307 QQLSATSR 314
+ + S+
Sbjct: 412 DEGTGVSQ 419
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 113/250 (45%), Gaps = 31/250 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +A+ + K A +G A G MY E D KEA + +R+
Sbjct: 444 GWMYADGTGVSQDYKEAVSWYQKAAEQGYARAQTKLGWMYVEGTGVSQDDKEAVL-WFRK 502
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ N EEAV +A+ GH AQ L GRGV
Sbjct: 503 AAEQGHALAQNNLGAMYAEGRGVSQNYEEAVYWYRKAAERGHALAQNNLGAMYAEGRGVS 562
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +EA WY +A E G + A YN L Y G G+ + +A W ++AA+ GH AQ
Sbjct: 563 QNYEEAVSWYRKAIEQGAMDAQYNLGLSYERGVGVIQDYEEAVLWFRKAAEQGHALAQ-- 620
Query: 270 HGLG-LFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
+ LG ++ EG + +AV + AT G A + V+ ++ S+D V S
Sbjct: 621 NNLGSMYVEGRGISQNYEEAVSWYRKATEQGLALAQNNLGVMHEKGLGVSQDYKEAV--S 678
Query: 324 W--RAMPSLH 331
W +A+ H
Sbjct: 679 WYKKAVEQGH 688
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GV + +A+ + K A +G A + G+MY E D KEA +S YR+
Sbjct: 264 GWMYEKGIGVSLDNKEAVSWYRKAAEQGHARAQNNLGVMYEEGRGVSQDYKEA-VSWYRK 322
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ N +EAV +A+ G+ AQ L + +GRGV
Sbjct: 323 AAEQGNATAQNNLGVMYEKGRGVSQNDKEAVSWYRKAAEQGNATAQNNLGVMYEKGRGVS 382
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +EA WY +AAE G A N + Y G G+ ++A W ++AA+ G+ +AQ
Sbjct: 383 QNDKEAVSWYRKAAEQGDASAQNNLGIMYDEGTGVSQGDKEAVSWYRQAAEQGYARAQTN 442
Query: 270 HGLGLFTEG 278
G ++ +G
Sbjct: 443 LGW-MYADG 450
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV ++ ++A+ F K A +G LA + G MY E E A+S YR+A
Sbjct: 588 GLSYERGVGVIQDYEEAVLWFRKAAEQGHALAQNNLGSMYVEGRGISQNYEEAVSWYRKA 647
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
G AQ + +EAV +A GH AQ L + GRGV
Sbjct: 648 TEQGLALAQNNLGVMHEKGLGVSQDYKEAVSWYKKAVEQGHALAQNNLGVMYGEGRGVSR 707
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA WY +AAE G V A +N + Y G G+ ++A W ++AA+ GH ++Q
Sbjct: 708 DDKEAVFWYKKAAEQGVVDAQHNLGMSYEQGAGVSQDDKEAVYWYEKAAEQGHARSQNHL 767
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G ++ EG + +AV + A + G A + V+ + S+D
Sbjct: 768 GW-MYDEGIGVSQDDKEAVSWYGKAAKQGLATAQNNLGVMYAEGRGVSQD 816
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV ++ +A+ F K A +G LA + G MY E E A+ YR+A
Sbjct: 480 GWMYVEGTGVSQDDKEAVLWFRKAAEQGHALAQNNLGAMYAEGRGVSQNYEEAVYWYRKA 539
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ N EEAV +A G + AQY L L RG GV
Sbjct: 540 AERGHALAQNNLGAMYAEGRGVSQNYEEAVSWYRKAIEQGAMDAQYNLGLSYERGVGVIQ 599
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
+ +EA W+ +AAE G+ A N Y G G+ ++ +A W ++A + G AQ
Sbjct: 600 DYEEAVLWFRKAAEQGHALAQNNLGSMYVEGRGISQNYEEAVSWYRKATEQGLALAQNNL 659
Query: 268 -LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ H GL + +AV + + A G A + V+ + SRD
Sbjct: 660 GVMHEKGLGVSQDYKEAVSWYKKAVEQGHALAQNNLGVMYGEGRGVSRD 708
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV +A+ GH RAQ L +GRGV + +EA WY +AAE GY RA N
Sbjct: 63 QAVSWYRKAAEQGHARAQTNLGRMYKKGRGVSQDYEEAVSWYRKAAEQGYARAQTNLGWM 122
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 292
Y G G+ + ++ W ++AA+ G+ +AQ G ++ EG + +AV + + A
Sbjct: 123 YDEGRGVSQDYEESVSWYRKAAEQGYARAQTNLGW-MYKEGRGISQDDKEAVSWYKKAAE 181
Query: 293 AGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
GE +A + + + S+D V SW
Sbjct: 182 QGEASAQNNLGWMYDEGRGVSQDDKEAV--SW 211
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV + +A+ + + A +G A + G MY + D KE A+S Y++
Sbjct: 408 GIMYDEGTGVSQGDKEAVSWYRQAAEQGYARAQTNLGWMYADGTGVSQDYKE-AVSWYQK 466
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + +EAV +A+ GH AQ L GRGV
Sbjct: 467 AAEQGYARAQTKLGWMYVEGTGVSQDDKEAVLWFRKAAEQGHALAQNNLGAMYAEGRGVS 526
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
N +EA WY +AAE G+ A N Y+ G G+ ++ +A W ++A + G AQ
Sbjct: 527 QNYEEAVYWYRKAAERGHALAQNNLGAMYAEGRGVSQNYEEAVSWYRKAIEQGAMDAQYN 586
Query: 268 ----LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
E G+G+ + E +AV++ A G A +
Sbjct: 587 LGLSYERGVGVIQDYE--EAVLWFRKAAEQGHALAQN 621
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV ++ +A+ + K +G LA + G+MY E D KEA + Y++AA G
Sbjct: 666 GLGVSQDYKEAVSWYKKAVEQGHALAQNNLGVMYGEGRGVSRDDKEA-VFWYKKAAEQGV 724
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AQ + +EAV +A+ GH R+Q L G GV + +EA
Sbjct: 725 VDAQHNLGMSYEQGAGVSQDDKEAVYWYEKAAEQGHARSQNHLGWMYDEGIGVSQDDKEA 784
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
WY +AA+ G A N + Y+ G G+ +++A W ++A + G AQ G+ ++
Sbjct: 785 VSWYGKAAKQGLATAQNNLGVMYAEGRGVSQDYKEAVSWYRKAMEQGDVDAQNNLGV-MY 843
Query: 276 TEG 278
+G
Sbjct: 844 AKG 846
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 25/233 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGV ++ +A+ + K A +G A + G+ Y + D KE A+ Y +
Sbjct: 696 GVMYGEGRGVSRDDKEAVFWYKKAAEQGVVDAQHNLGMSYEQGAGVSQDDKE-AVYWYEK 754
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G +Q + +EAV +A+ G AQ L + GRGV
Sbjct: 755 AAEQGHARSQNHLGWMYDEGIGVSQDDKEAVSWYGKAAKQGLATAQNNLGVMYAEGRGVS 814
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EA WY +A E G V A N + Y+ G G+ ++A +AA+ G AQ
Sbjct: 815 QDYKEAVSWYRKAMEQGDVDAQNNLGVMYAKGTGVSRDEKKAVSLYTKAAEQGLATAQYN 874
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
G ++ EG+ + + ++L+LA G+ + +++ ++++ ++A
Sbjct: 875 LG-SMYAEGKGVTKNDKTSYMWLKLAQYNGKEGMQNDFDIMTKRMTLIDVNKA 926
>gi|428173028|gb|EKX41933.1| hypothetical protein GUITHDRAFT_158179 [Guillardia theta CCMP2712]
Length = 282
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 23/244 (9%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMD 151
L E L G + G GV ++L KA ++F K A A + G+ Y E+D
Sbjct: 15 ELGEKNALFNLGVCYSQGIGVEEDLVKAFENFKKSADLKDMKAELQVGICYMVGKGTEVD 74
Query: 152 KKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQL 198
+ E A++ +R+AA GD AQ + EEA + +A+ G AQ++L
Sbjct: 75 E-EQAVAYFRRAAEQGDATAQYNMGVCNGKGRGVKKSLEEAARWYRKAAEQGDSMAQFRL 133
Query: 199 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
ALCL G+GV + EA RWY +AAE + A++N +CY+ G+G+ H +A + ++A
Sbjct: 134 ALCLATGKGVAKDFPEAIRWYEKAAEQEHGGALFNLGVCYAQGDGVEQDHTKAVSYYRKA 193
Query: 259 ADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 314
AD G AQ GL L T E +A+++ A + G+ A V + +
Sbjct: 194 ADLGVVHAQHNLGLCLLTGQGAEPSPEEALLWYLKAAKQGDAKAQFAAGVCYESGQGVDK 253
Query: 315 DRAM 318
D M
Sbjct: 254 DVDM 257
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 33/190 (17%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V KS +A R R+A M R G+GV K+ +A+ + K A + A+
Sbjct: 107 VKKSLEEAARWYRKAAEQGDSMAQFRLALCLATGKGVAKDFPEAIRWYEKAAEQEHGGAL 166
Query: 141 VDAGLMYWEMDKKEA----AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQY 196
+ G+ Y + D E A+S YR+AA LG V AQ+
Sbjct: 167 FNLGVCYAQGDGVEQDHTKAVSYYRKAADLG-----------------------VVHAQH 203
Query: 197 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
L LCL G+G + + +EA WYL+AA+ G +A + +CY G+G+ A +
Sbjct: 204 NLGLCLLTGQGAEPSPEEALLWYLKAAKQGDAKAQFAAGVCYESGQGVDKDVDMAMSLYE 263
Query: 257 RAADCGHGKA 266
+A G+ KA
Sbjct: 264 QAVKAGNAKA 273
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+A +AV ++A G A + L +C +G GV+ +L +A + ++A+ ++A
Sbjct: 2 DAAKAVACFFKAGELGEKNALFNLGVCYSQGIGVEEDLVKAFENFKKSADLKDMKAELQV 61
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+CY G+G + QA + +RAA+ G AQ G+
Sbjct: 62 GICYMVGKGTEVDEEQAVAYFRRAAEQGDATAQYNMGV 99
>gi|343511227|ref|ZP_08748403.1| Sel1 domain-containing protein [Vibrio scophthalmi LMG 19158]
gi|342798958|gb|EGU34550.1| Sel1 domain-containing protein [Vibrio scophthalmi LMG 19158]
Length = 443
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKE---AAISLY 160
L G+ + +GV +NL +AL+ + K A +GS A + A ++ + + E AA+ Y
Sbjct: 140 LNVGRMLEFAQGVEENLQQALEWYSKAAEQGSAEAQYNMAAMLAYGISTDEDLGAALYWY 199
Query: 161 RQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
QAA AQ + N EA+K A+ GH AQ+ LA+ L+ G G
Sbjct: 200 YQAAEQNHLEAQYSVALMLELGKGIEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGAG 259
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
++ N +A W+LRAAE G+V A YN + Y FG G + +A W AA+ GH AQ
Sbjct: 260 IEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGRGTEPNKTKAFIWYHHAAENGHADAQ 319
Query: 268 LE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
+ LG+ T +A + A + G AA + V+L+ +D M +
Sbjct: 320 FSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQD--MDEAIA 377
Query: 324 WRAMPS 329
W M +
Sbjct: 378 WYTMAA 383
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-----------------YWEMDKK 153
+ HG G+ +N A +LK A +G A ++ G M Y + ++
Sbjct: 110 YYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYSKAAEQ 169
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
+A + Y AA+L + + A+ YQA+ H+ AQY +AL L G+G++ N
Sbjct: 170 GSAEAQYNMAAMLAYGISTDEDLGAALYWYYQAAEQNHLEAQYSVALMLELGKGIEKNKS 229
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
EA +WYL AA+ G+ A +N ++ FG G+ + A W RAA+ GH +AQ G+
Sbjct: 230 EAIKWYLIAAQQGHAEAQFNLAMMLYFGAGIEENKPDAFTWFLRAAEQGHVEAQYNVGMM 289
Query: 273 ---GLFTEGEMMKAVVYLELATRAGETAA 298
G TE KA ++ A G A
Sbjct: 290 YDFGRGTEPNKTKAFIWYHHAAENGHADA 318
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDP 169
++ G G N +KA + F + A G + A G MY+ G+
Sbjct: 37 QYYFGNGGSINKEKAFELFSQAATDGHSEAQYYLGHMYY-----------------FGET 79
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P + +A + + QA+ G++RAQY LA + G G+ N A WYL+AAE G+ +
Sbjct: 80 T--PVDKAQATRWMEQAAEQGNMRAQYHLATMYYHGDGISENRSMAFHWYLKAAEQGHAK 137
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A N F +G+ + +QA +W +AA+ G +AQ
Sbjct: 138 AQLNVGRMLEFAQGVEENLQQALEWYSKAAEQGSAEAQ 175
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ +N A FL+ A +G A + G+MY E +K +A I Y AA G
Sbjct: 257 GAGIEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGRGTEPNKTKAFI-WYHHAAENGH 315
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AQ P N +EA +A+ G V AQY L + L G+G++ ++ EA
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMDEA 375
Query: 216 ARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY AAE G + Y +L +S E H A W ++AA GH KAQ
Sbjct: 376 IAWYTMAAEQGDAESQYILGTLYHSNLEDFESKHL-AMMWYQKAAKQGHEKAQ 427
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N E+A +L QA+ GH AQY L + G + +A RW +AAE G +RA Y+
Sbjct: 47 NKEKAFELFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWMEQAAEQGNMRAQYHL 106
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG---EMMKAVVYLELA 290
+ Y G+G+ + A W +AA+ GH KAQL G L F +G + +A+ + A
Sbjct: 107 ATMYYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYSKA 166
Query: 291 TRAGETAADHVKNVILQQLSATSRD 315
G A + +L +T D
Sbjct: 167 AEQGSAEAQYNMAAMLAYGISTDED 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G+G+ KN +A+ +L A +G A + +M + + K A + + +AA G
Sbjct: 221 GKGIEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGAGIEENKPDAFTWFLRAAEQGHV 280
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ N +A + A+ GH AQ+ LA G G N +EA
Sbjct: 281 EAQYNVGMMYDFGRGTEPNKTKAFIWYHHAAENGHADAQFSLASLYELGVGTPVNKKEAY 340
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY++AA+ G V A YN + G+G+ +A W AA+ G ++Q
Sbjct: 341 FWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMDEAIAWYTMAAEQGDAESQ 391
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y LA+ + G G N ++A + +AA G+ A Y Y FGE P+ QA +WM
Sbjct: 32 YDLAVQYYFGNGGSINKEKAFELFSQAATDGHSEAQYYLGHMYYFGETTPVDKAQATRWM 91
Query: 256 KRAADCGHGKAQLE------HGLGL 274
++AA+ G+ +AQ HG G+
Sbjct: 92 EQAAEQGNMRAQYHLATMYYHGDGI 116
>gi|342217685|ref|ZP_08710324.1| Sel1 repeat protein [Megasphaera sp. UPII 135-E]
gi|341593348|gb|EGS36198.1| Sel1 repeat protein [Megasphaera sp. UPII 135-E]
Length = 1112
Score = 94.7 bits (234), Expect = 5e-17, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G+GV +N KA++ + K A+G+TLA + GL Y + E A++ Y++AA
Sbjct: 860 YHYGKGVVRNYTKAVEWYKKAVAQGNTLAQNNLGLCYEDGKGVAQDYEQAVAWYQKAAAQ 919
Query: 167 GDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD A N E+A++L +A+ G A L C G+GV +
Sbjct: 920 GDSIALNNLGRCYEAGKGVVQNYEKAIELYKKAAEQGDATAYDNLGWCYQHGKGVIQDYA 979
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +AAE G A N +CY +G+G+ + +A +W ++AAD G+ AQ+ G+
Sbjct: 980 KAIEWYKKAAEQGDATAQNNLGICYQYGKGVAKDYAKAVEWYQKAADQGNATAQIHLGM- 1038
Query: 274 LFTEGEMM--------------------KAVVYLELATRAGETAADHVK 302
+ EG+ + A +Y++LA + E A+ V+
Sbjct: 1039 RYDEGKGVVQNYEKAIEWYKKAAIQGDPDAQIYIQLAKKRKEERAERVR 1087
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+++G+GV +N +KA++ + K A +G A G Y E + E AI Y++A
Sbjct: 752 YEYGKGVVQNYEKAIEWYKKAAEQGDATAQSHLGGCYQEGKGVVQDYEKAIEWYKKAIAQ 811
Query: 167 GDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ + E+AV +A+ G AQ L +C H G+GV N
Sbjct: 812 GDATAQNNLGMCYQYGEGVVQDYEKAVGWFKKAAAQGDATAQNNLGICYHYGKGVVRNYT 871
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 267
+A WY +A G A N LCY G+G+ + QA W ++AA G A
Sbjct: 872 KAVEWYKKAVAQGNTLAQNNLGLCYEDGKGVAQDYEQAVAWYQKAAAQGDSIALNNLGRC 931
Query: 268 LEHGLGLFTEGEMMKAV-VYLELATRAGETAADHV 301
E G G+ E KA+ +Y + A + TA D++
Sbjct: 932 YEAGKGVVQNYE--KAIELYKKAAEQGDATAYDNL 964
Score = 84.3 bits (207), Expect = 7e-14, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV ++ +KA + + K A +G A G+ Y + A+ Y++AA
Sbjct: 613 YEEGKGVVQDDEKAGEWYQKAAVKGHIAAQYQLGVCYEKGNGVAQDDAKAVEWYQKAATQ 672
Query: 167 GDPAAQPANAE--------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G+ AQ + E +A++ +A+ G+ AQ L +C G+GV + ++A W
Sbjct: 673 GNVDAQNSMDELQKKQKEQKAIEEYQKAAAQGNTTAQNNLGVCYEYGKGVAQDYKKAVEW 732
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
Y +AA G A N +CY +G+G+ ++ +A +W K+AA+ G AQ G G + EG
Sbjct: 733 YQKAAAQGNATAQNNLGVCYEYGKGVVQNYEKAIEWYKKAAEQGDATAQSHLG-GCYQEG 791
Query: 279 EMM-----KAVVYLELATRAGETAADH 300
+ + KA+ + + A G+ A +
Sbjct: 792 KGVVQDYEKAIEWYKKAIAQGDATAQN 818
Score = 78.6 bits (192), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAVLGDPAAQ 172
++ KA++ + K AA+G+T A + G+ Y E K A A+ Y++AA G+ AQ
Sbjct: 687 KQKEQKAIEEYQKAAAQGNTTAQNNLGVCY-EYGKGVAQDYKKAVEWYQKAAAQGNATAQ 745
Query: 173 P-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
N E+A++ +A+ G AQ L C G+GV + ++A WY
Sbjct: 746 NNLGVCYEYGKGVVQNYEKAIEWYKKAAEQGDATAQSHLGGCYQEGKGVVQDYEKAIEWY 805
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLF 275
+A G A N +CY +GEG+ + +A W K+AA G AQ G+ G
Sbjct: 806 KKAIAQGDATAQNNLGMCYQYGEGVVQDYEKAVGWFKKAAAQGDATAQNNLGICYHYGKG 865
Query: 276 TEGEMMKAVVYLELATRAGETAADH 300
KAV + + A G T A +
Sbjct: 866 VVRNYTKAVEWYKKAVAQGNTLAQN 890
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQPA---- 174
KA+D + K A +G+ A G Y + A+ Y++AA G+ AQ +
Sbjct: 522 KAVDWYQKAATQGNVDAQYQLGWCYEYGTGIVQDDAKAVEWYQKAATQGNVDAQNSMDKL 581
Query: 175 ----NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
++A++ +A+ G+ AQYQL +C G+GV + ++A WY +AA G++ A
Sbjct: 582 QKEQKEQKAIEEYQKAAAQGNAEAQYQLGVCYEEGKGVVQDDEKAGEWYQKAAVKGHIAA 641
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y +CY G G+ +A +W ++AA G+ AQ
Sbjct: 642 QYQLGVCYEKGNGVAQDDAKAVEWYQKAATQGNVDAQ 678
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A++ Q + G+ QY L +C G+GV N ++A WY +AA G V A Y C
Sbjct: 417 KAIEWYQQVATQGNAEVQYYLGVCYRTGKGVAQNYKKAVEWYQKAATQGNVDAQYQLGWC 476
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE---GEMMKAVVYLELATRAG 294
Y G+G+ + +A +W ++AA G+ AQ + LG+F E + KAV + + A G
Sbjct: 477 YEKGKGVAQDYAKAVEWYQKAAIQGNVDAQ--YHLGVFYEVVVQDDTKAVDWYQKAATQG 534
Query: 295 ETAADH 300
A +
Sbjct: 535 NVDAQY 540
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI Y+Q A G+ Q N ++AV+ +A+ G+V AQYQL C
Sbjct: 418 AIEWYQQVATQGNAEVQYYLGVCYRTGKGVAQNYKKAVEWYQKAATQGNVDAQYQLGWCY 477
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G+GV + +A WY +AA G V A Y+ + Y E + +A W ++AA G
Sbjct: 478 EKGKGVAQDYAKAVEWYQKAAIQGNVDAQYHLGVFY---EVVVQDDTKAVDWYQKAATQG 534
Query: 263 HGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
+ AQ E+G G+ + KAV + + A G A +
Sbjct: 535 NVDAQYQLGWCYEYGTGIVQDDA--KAVEWYQKAATQGNVDAQN 576
>gi|345892024|ref|ZP_08842849.1| hypothetical protein HMPREF1022_01509 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047629|gb|EGW51492.1| hypothetical protein HMPREF1022_01509 [Desulfovibrio sp.
6_1_46AFAA]
Length = 295
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAI 157
M G + G G+ +N +A + K A +G +A + G+MY + D K A
Sbjct: 1 MAQFNLGVMYNQGDGIEQNKAEAAKLYKKAAEQGHAMAQFNLGVMYSQGDGIEQNKAEAT 60
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
Y++AA G AQ N EA K +A+ G RAQ+ L + +
Sbjct: 61 KWYKKAAEQGLARAQFNLAIMYDEDDGIEQNKAEAAKWYKKAAEQGLARAQFNLGVMYSQ 120
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G G++ N EA +WY++AAE G+++A +N ++ YS G+G+ +A KW +AA+ G+
Sbjct: 121 GDGIEQNKIEAEKWYIKAAEQGHIKAQFNLAVMYSIGDGIEQDKAEAEKWYIKAAEQGNA 180
Query: 265 KAQL 268
KAQ
Sbjct: 181 KAQF 184
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
AM G + G G+ +N +A + K A +G A + +MY E D K A
Sbjct: 36 AMAQFNLGVMYSQGDGIEQNKAEATKWYKKAAEQGLARAQFNLAIMYDEDDGIEQNKAEA 95
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
Y++AA G AQ N EA K +A+ GH++AQ+ LA+
Sbjct: 96 AKWYKKAAEQGLARAQFNLGVMYSQGDGIEQNKIEAEKWYIKAAEQGHIKAQFNLAVMYS 155
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G G++ + EA +WY++AAE G +A +N ++ Y G+G+ R A W ++AA+ H
Sbjct: 156 IGDGIEQDKAEAEKWYIKAAEQGNAKAQFNLAVMYDKGDGVNPDQRTAVSWYQKAAEQRH 215
Query: 264 GKAQLEHGLGLFT----EGEMMKAVVYLEL 289
A LE F +KA V+L L
Sbjct: 216 APAALEMASRYFNGKGVPENYIKAYVFLLL 245
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EA KL +A+ GH AQ+ L + +G G++ N EA +WY +AAE G RA +N
Sbjct: 19 NKAEAAKLYKKAAEQGHAMAQFNLGVMYSQGDGIEQNKAEATKWYKKAAEQGLARAQFNL 78
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++ Y +G+ + +A KW K+AA+ G +AQ G+ ++++G+
Sbjct: 79 AIMYDEDDGIEQNKAEAAKWYKKAAEQGLARAQFNLGV-MYSQGD 122
>gi|189502234|ref|YP_001957951.1| hypothetical protein Aasi_0851 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497675|gb|ACE06222.1| hypothetical protein Aasi_0851 [Candidatus Amoebophilus asiaticus
5a2]
Length = 961
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + GRGV +N KA+ F K A +G A G MY E + AI Y +A
Sbjct: 337 GWMYADGRGVAQNYAKAIKWFQKAANQGHASAQYKLGWMYAEGLGVVKDARKAIEWYERA 396
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD +AQ +A +A+K +A+ GH +QY LA G+GV
Sbjct: 397 AKQGDASAQSNLGVSYANGWGVAKDARKAIKWFQKAADQGHATSQYNLAWMYADGQGVVK 456
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A W+ +AA GYV+A YN Y+ G G+ R+A +W K+AA GH AQL+
Sbjct: 457 DTRKAVEWFQKAANQGYVKAQYNLGWMYAEGRGVDKDARKAIEWYKKAAKQGHADAQLKL 516
Query: 271 GLGLF 275
G F
Sbjct: 517 GARYF 521
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G ++ G GV K+ KA++ + K A +G A G+MY E ++K E A+ Y +A
Sbjct: 697 GVIYESGEGVEKDEKKAIEWYEKAANQGHARAQFSLGVMYGEGEGVEKDERKAVEWYEKA 756
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +A++ +A+ GH RAQY L +GV
Sbjct: 757 ANQGHARAQFKLGWMYGEGRGVSQDYAKAIEWSEKAANQGHARAQYNLGWIYENWKGVAK 816
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
+ +A W+ +AA GY RA YN + Y G+G+ ++++A KW +++ G+ A+
Sbjct: 817 DYAKAVEWFQKAANQGYARAQYNLARMYDHGQGVVQNYQEAVKWYEKSVGQGNNYAKAYL 876
Query: 268 ---LEHGLGLFTEGEMMKAVVYLELA 290
HG G E +++A +E A
Sbjct: 877 GRLYYHGFG--AEKNLLQASKLIEEA 900
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 33/246 (13%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM---- 146
W + A V L+ R+ G G+ K+ KA++ F K A +G A + G +
Sbjct: 608 WYEKAANQGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKTANQGHANAQYNLGYVHEKG 667
Query: 147 -------------YWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVR 193
Y + +E A S Y + + ++A++ +A+ GH R
Sbjct: 668 LGVAKDYVKAIEWYEKAANQEHAKSQYALGVIYESGEGVEKDEKKAIEWYEKAANQGHAR 727
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ+ L + G GV+ + ++A WY +AA G+ RA + Y G G+ + +A +
Sbjct: 728 AQFSLGVMYGEGEGVEKDERKAVEWYEKAANQGHARAQFKLGWMYGEGRGVSQDYAKAIE 787
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAA--------D 299
W ++AA+ GH +AQ + LG E + KAV + + A G A D
Sbjct: 788 WSEKAANQGHARAQ--YNLGWIYENWKGVAKDYAKAVEWFQKAANQGYARAQYNLARMYD 845
Query: 300 HVKNVI 305
H + V+
Sbjct: 846 HGQGVV 851
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 23/266 (8%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G ++ G GV K+ KA+ + + A +G + G++Y
Sbjct: 533 AKEWYEKTADQGHAHAQYNLGYMYEKGLGVAKDYVKAIAWYKQAANQGHAKSQYALGVIY 592
Query: 148 WE----MDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAG 190
E AI Y +AA G Q + +A++ + + G
Sbjct: 593 IEGQGVAKDVRKAIEWYEKAANQGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKTANQG 652
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
H AQY L +G GV + +A WY +AA + ++ Y + Y GEG+ ++
Sbjct: 653 HANAQYNLGYVHEKGLGVAKDYVKAIEWYEKAANQEHAKSQYALGVIYESGEGVEKDEKK 712
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVI 305
A +W ++AA+ GH +AQ G+ ++ EGE + KAV + E A G A +
Sbjct: 713 AIEWYEKAANQGHARAQFSLGV-MYGEGEGVEKDERKAVEWYEKAANQGHARAQFKLGWM 771
Query: 306 LQQLSATSRDRAMLVVDSWRAMPSLH 331
+ S+D A + S +A H
Sbjct: 772 YGEGRGVSQDYAKAIEWSEKAANQGH 797
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
+ G+GV K+ KA++ F K A +G A + G MY E +DK AI Y++AA
Sbjct: 448 YADGQGVVKDTRKAVEWFQKAANQGYVKAQYNLGWMYAEGRGVDKDARKAIEWYKKAAKQ 507
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ + +A + + + GH AQY L +G GV +
Sbjct: 508 GHADAQLKLGARYFKGEGIAKDYAKAKEWYEKTADQGHAHAQYNLGYMYEKGLGVAKDYV 567
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +AA G+ ++ Y + Y G+G+ R+A +W ++AA+ GH QL+
Sbjct: 568 KAIAWYKQAANQGHAKSQYALGVIYIEGQGVAKDVRKAIEWYEKAANQGHADVQLKLAAR 627
Query: 274 LFT-EG---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
F EG + KA+ + + G A + + ++ ++D
Sbjct: 628 YFKGEGIAKDYAKAIEWFQKTANQGHANAQYNLGYVHEKGLGVAKD 673
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L+ G R+ G G+ K+ KA + + K A +G A + G MY E + + +
Sbjct: 514 LKLGARYFKGEGIAKDYAKAKEWYEKTADQGHAHAQYNLGYMY------EKGLGVAKDYV 567
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+A+ QA+ GH ++QY L + G+GV ++++A WY +AA
Sbjct: 568 -------------KAIAWYKQAANQGHAKSQYALGVIYIEGQGVAKDVRKAIEWYEKAAN 614
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEM 280
G+ + Y GEG+ + +A +W ++ A+ GH AQ H GL +
Sbjct: 615 QGHADVQLKLAARYFKGEGIAKDYAKAIEWFQKTANQGHANAQYNLGYVHEKGLGVAKDY 674
Query: 281 MKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+KA+ + E A + + VI + +D
Sbjct: 675 VKAIEWYEKAANQEHAKSQYALGVIYESGEGVEKDE 710
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
HV AQY++ + GRG+ N +A WY +AA+ G+ A N Y+ G G+ ++ +
Sbjct: 293 HVHAQYKVGVMCAEGRGIAKNAAKAVEWYEKAAKQGHAVAQSNLGWMYADGRGVAQNYAK 352
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 298
A KW ++AA+ GH AQ + G ++ EG + KA+ + E A + G+ +A
Sbjct: 353 AIKWFQKAANQGHASAQYKLGW-MYAEGLGVVKDARKAIEWYERAAKQGDASA 404
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
NA +AV+ +A+ GH AQ L GRGV N +A +W+ +AA G+ A Y
Sbjct: 313 NAAKAVEWYEKAAKQGHAVAQSNLGWMYADGRGVAQNYAKAIKWFQKAANQGHASAQYKL 372
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
Y+ G G+ R+A +W +RAA G AQ G+ G + KA+ + + A
Sbjct: 373 GWMYAEGLGVVKDARKAIEWYERAAKQGDASAQSNLGVSYANGWGVAKDARKAIKWFQKA 432
Query: 291 TRAGETAADH 300
G + +
Sbjct: 433 ADQGHATSQY 442
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 78/214 (36%), Gaps = 60/214 (28%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV K+ KA++ + K A +G A G MY E AI +A
Sbjct: 733 GVMYGEGEGVEKDERKAVEWYEKAANQGHARAQFKLGWMYGEGRGVSQDYAKAIEWSEKA 792
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +AV+ +A+ G+ RAQY LA G+GV
Sbjct: 793 ANQGHARAQYNLGWIYENWKGVAKDYAKAVEWFQKAANQGYARAQYNLARMYDHGQGVVQ 852
Query: 211 NLQEAARWYLRA-------------------------------------------AEGGY 227
N QEA +WY ++ AE G
Sbjct: 853 NYQEAVKWYEKSVGQGNNYAKAYLGRLYYHGFGAEKNLLQASKLIEEAIIHMKSKAEEGC 912
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
+ A Y Y +G G+ H +A W K++A+
Sbjct: 913 IEAQYIVGWMYQYGLGVMQDHVEAAVWYKKSANT 946
>gi|148262856|ref|YP_001229562.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396356|gb|ABQ24989.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 393
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 29/219 (13%)
Query: 88 CKSWND-----ALRPLR---EAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAARGSTL 138
+++ND A+R R A L G + G+GV K N +A+ + K A +G
Sbjct: 29 LRAYNDGDYATAMREYRIDGSARSLFNLGLMYAEGKGVNKRNSREAMKWYRKAAEQGLAK 88
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAV 180
A GLMY DKKEAA YR+AA G AAQ + EA
Sbjct: 89 AQFALGLMYALGEDVAADKKEAA-RWYRKAAEQGHAAAQYNLAQMYARGDGVKKDETEAD 147
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
K +A+ G+ AQ LA +G GV + +EAARWYL+AAE G VRA ++ ++ Y
Sbjct: 148 KWYRKAAEQGNAAAQLNLAQLYEKGAGVVQDKKEAARWYLKAAEQGNVRAQFSIAMMYDK 207
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G+G+ + ++A +W +RAA+ H KAQ + G L+ +G+
Sbjct: 208 GDGVEQNKKEAARWFRRAAEQNHAKAQFKIGF-LYDKGD 245
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GV+K+ +A + K A +G+ A ++ +Y + DKKEAA Y +AA
Sbjct: 133 YARGDGVKKDETEADKWYRKAAEQGNAAAQLNLAQLYEKGAGVVQDKKEAA-RWYLKAAE 191
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ AQ N +EA + +A+ H +AQ+++ +G GV +
Sbjct: 192 QGNVRAQFSIAMMYDKGDGVEQNKKEAARWFRRAAEQNHAKAQFKIGFLYDKGDGVLQDK 251
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+EA +WY +AAE G A +N L Y G G+P + A +W ++AAD G AQ G
Sbjct: 252 KEAVKWYRKAAERGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGDVDAQFNLGH 311
Query: 273 GLFTEGEMMK 282
++ +G+ +K
Sbjct: 312 -MYDQGDGIK 320
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 73 AASFTLPQLRA-ASLVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKAL 125
AA + L Q+ A V K +A + R+A L + ++ G GV ++ +A
Sbjct: 124 AAQYNLAQMYARGDGVKKDETEADKWYRKAAEQGNAAAQLNLAQLYEKGAGVVQDKKEAA 183
Query: 126 DSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ-------- 172
+LK A +G+ A +MY E +KKEAA +R+AA AQ
Sbjct: 184 RWYLKAAEQGNVRAQFSIAMMYDKGDGVEQNKKEAA-RWFRRAAEQNHAKAQFKIGFLYD 242
Query: 173 -----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +EAVK +A+ G A++ L L + G GV + + AARW+ +AA+ G
Sbjct: 243 KGDGVLQDKKEAVKWYRKAAERGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGD 302
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
V A +N Y G+G+ ++A KW ++AA+ G +AQ GL F
Sbjct: 303 VDAQFNLGHMYDQGDGIKQDRKEAVKWYRKAAEQGFDQAQFNLGLMYF 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GV +N +A F + A + A G +Y + DKKEA + YR+AA
Sbjct: 205 YDKGDGVEQNKKEAARWFRRAAEQNHAKAQFKIGFLYDKGDGVLQDKKEA-VKWYRKAAE 263
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G A+ P + + A + +A+ G V AQ+ L +G G+ +
Sbjct: 264 RGVSEARFNLGLMYYAGSGVPQDKKAAARWFRKAADQGDVDAQFNLGHMYDQGDGIKQDR 323
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+EA +WY +AAE G+ +A +N L Y G G+ + ++A KW +AA+ G +A
Sbjct: 324 KEAVKWYRKAAEQGFDQAQFNLGLMYFHGYGVKQNRKEAFKWFVKAAEQGSDEA 377
>gi|345869667|ref|ZP_08821624.1| serine/threonine protein kinase [Thiorhodococcus drewsii AZ1]
gi|343923050|gb|EGV33747.1| serine/threonine protein kinase [Thiorhodococcus drewsii AZ1]
Length = 981
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F +GRGV ++ +AL F K A +G A + GL I+ + +
Sbjct: 761 GIAFFYGRGVIQSDHQALKWFHKAAEQGYIEAQYNLGL-----------INTFGRGTKKD 809
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D +++ + ++A+ GH AQY L + GRGV N +AARWY +AAE G+
Sbjct: 810 D--------QQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKKNQSQAARWYRKAAEQGF 861
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EMMKA 283
A YN + YS G G+ QA W ++AA+ GH +AQ +G+ EG + +A
Sbjct: 862 ANAQYNLGIMYSEGRGVNKDQSQADHWYRKAAEQGHAQAQNNYGVKFMVGEGVGPDYYQA 921
Query: 284 VVYLELATRAGETAA 298
++ E A++ G A
Sbjct: 922 FLWFEKASKQGHADA 936
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
GRG +K+ ++ + F K A++G T A + G+MY E +
Sbjct: 803 GRGTKKDDQQSAEWFHKAASQGHTEAQYNLGIMYSEGRGVKK------------------ 844
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N +A + +A+ G AQY L + GRGV+ + +A WY +AAE G+ +A N
Sbjct: 845 -NQSQAARWYRKAAEQGFANAQYNLGIMYSEGRGVNKDQSQADHWYRKAAEQGHAQAQNN 903
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
+ + GEG+ + QA W ++A+ GH AQ G+ GL + +A +
Sbjct: 904 YGVKFMVGEGVGPDYYQAFLWFEKASKQGHADAQNNLGMLYEFGLGVPADHHQAAYWFHQ 963
Query: 290 ATRAGETAA 298
A G A
Sbjct: 964 AANQGHKGA 972
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%)
Query: 83 AASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLD----KALDSFLKGAARGSTL 138
AA+ + K+ + + P+ ++ L+ F + + N D KAL F K A G +
Sbjct: 593 AANWIAKA--EEINPINSDLIGLQSHLGFIY---LETNTDQDNRKALRLFNKAAINGHAM 647
Query: 139 AMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQP------ANA-------EEAVK 181
A + G+MY A+ YR+AA G+ AQ AN ++AV+
Sbjct: 648 AQYNLGVMYANGLGTTKDDRQAVEWYRKAAEQGNADAQNNLGVMYANGLGITKDDQQAVE 707
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
+A+ G AQ L + GRG++ + +A+ W+ +AAE G+ A + + + +G
Sbjct: 708 WYRKAAEQGSADAQNNLGVMHSEGRGIELDQHQASHWFRKAAEQGHAAAQNSLGIAFFYG 767
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETA 297
G+ S QA KW +AA+ G+ +AQ GL G T+ + ++ + A G T
Sbjct: 768 RGVIQSDHQALKWFHKAAEQGYIEAQYNLGLINTFGRGTKKDDQQSAEWFHKAASQGHTE 827
Query: 298 ADHVKNVILQQLSATSRDRA 317
A + ++ + ++++
Sbjct: 828 AQYNLGIMYSEGRGVKKNQS 847
>gi|187735941|ref|YP_001878053.1| Sel1 domain-containing protein repeat-containing protein
[Akkermansia muciniphila ATCC BAA-835]
gi|187425993|gb|ACD05272.1| Sel1 domain protein repeat-containing protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 380
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK---EAAISLYRQAAVLG 167
+ +G GV K+ +A+ + K A +G +A ++ G +Y + E A+ Y+QAA G
Sbjct: 116 YVNGLGVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQG 175
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
DP AQ P N +A +A++ H AQY L C G GV+ +L +
Sbjct: 176 DPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDK 235
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 272
A WY ++A G + A Y CY G G+ + +A W +AA+ GH AQL G
Sbjct: 236 ALVWYHKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCH 295
Query: 273 --GLFTEGEMMKAV-VYLELATRAGETAADHVKNVILQQLSATSRDR 316
G T KA+ YL+ A + TA +V N D+
Sbjct: 296 LNGKGTPVNREKALKWYLKAAEQGNATAMFNVGNCYAHGYGIEQDDK 342
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
L L G + +G G ++ DKA + K A +G A D G Y ++K E
Sbjct: 67 LGHVTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDE 126
Query: 155 -AAISLYRQAAVLGDPAAQ----------PA--NAEEAVKLLYQASIAGHVRAQYQLALC 201
AI Y++AA G AQ P+ N E+AV QA+ G RAQY LA C
Sbjct: 127 HQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQGDPRAQYNLAWC 186
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G G N ++AA WY AA + A YN CY G G+ +A W ++A
Sbjct: 187 YGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWYHKSALQ 246
Query: 262 GHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAA 298
G AQ +G G E +M KAV + A G T A
Sbjct: 247 GQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTA 287
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV +LDKAL + K A +G A G Y G+
Sbjct: 223 YENGFGVEPDLDKALVWYHKSALQGQITAQYTLGWCY-------------------GNGR 263
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +AV +A+ GH AQ L C G+G N ++A +WYL+AAE G A
Sbjct: 264 GMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCHLNGKGTPVNREKALKWYLKAAEQGNATA 323
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
M+N CY+ G G+ +QA +W ++A G+ KA
Sbjct: 324 MFNVGNCYAHGYGIEQDDKQAEEWYQKAVRHGNKKA 359
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
V+ L Q ++ G +A +QLA+ +GRGV N QEA Y +AAE G+V A N YS
Sbjct: 22 VETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGHVTAQLNLGWAYS 81
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGE 295
G G P + +A W ++AA+ GH AQ + G GL E + +A+ + + A G
Sbjct: 82 NGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDEHQAIGWYKKAAEQGH 141
Query: 296 TAA 298
A
Sbjct: 142 AVA 144
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 58/241 (24%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A L + ++ GRGV +N +A + + A G A ++ G Y
Sbjct: 33 DAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGHVTAQLNLGWAY------------ 80
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ P + ++A +A+ GH AQ+ L C G GV+ + +A WY
Sbjct: 81 -------SNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDEHQAIGWY 133
Query: 220 LRAAEGGYV-----------------------------------RAMYNTSLCYSFGEGL 244
+AAE G+ RA YN + CY G G
Sbjct: 134 KKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQGDPRAQYNLAWCYGNGSGT 193
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
P + R+A W + AA H AQ G G E ++ KA+V+ + G+ A +
Sbjct: 194 PKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWYHKSALQGQITAQY 253
Query: 301 V 301
Sbjct: 254 T 254
>gi|398863568|ref|ZP_10619128.1| TPR repeat-containing protein [Pseudomonas sp. GM78]
gi|398247343|gb|EJN32792.1| TPR repeat-containing protein [Pseudomonas sp. GM78]
Length = 448
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +A + K A +G + + G+MY D+ +AA S +R+
Sbjct: 263 GVMYAKGVGVAQDKQQAAHWYQKAAEQGYATSQNNLGVMYTNGQGVAQDQHQAA-SWFRK 321
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + ++AV L +A+ G+V AQY L + RG G+
Sbjct: 322 AAEQGFAKAQFNLGVLYFNGRGVAQDRQQAVSLYQKAAEQGYVEAQYNLGVLYFRGEGLT 381
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+L++AA WY +AAE GY A YN L Y+ GEGL + AR W ++AA+ GH AQ
Sbjct: 382 RDLKQAAYWYQKAAEQGYANAQYNLGLMYAKGEGLAPDEQLARTWFQKAAEQGHAGAQ-- 439
Query: 270 HGLGL 274
H L +
Sbjct: 440 HALNI 444
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 25/220 (11%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVL 166
++G G+ K+L +A + K A +G A D G+MY + DK++AA Y++AA
Sbjct: 231 RYGWGLEKDLQQAAFWYQKAAEQGQAEAANDLGVMYAKGVGVAQDKQQAA-HWYQKAAEQ 289
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G +Q + +A +A+ G +AQ+ L + GRGV + Q
Sbjct: 290 GYATSQNNLGVMYTNGQGVAQDQHQAASWFRKAAEQGFAKAQFNLGVLYFNGRGVAQDRQ 349
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A Y +AAE GYV A YN + Y GEGL +QA W ++AA+ G+ AQ GL
Sbjct: 350 QAVSLYQKAAEQGYVEAQYNLGVLYFRGEGLTRDLKQAAYWYQKAAEQGYANAQYNLGL- 408
Query: 274 LFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQ 308
++ +GE + A + + A G A H N+ +++
Sbjct: 409 MYAKGEGLAPDEQLARTWFQKAAEQGHAGAQHALNITMKK 448
>gi|319639039|ref|ZP_07993797.1| hypothetical protein HMPREF0604_01421 [Neisseria mucosa C102]
gi|317399943|gb|EFV80606.1| hypothetical protein HMPREF0604_01421 [Neisseria mucosa C102]
Length = 339
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 34/280 (12%)
Query: 68 VLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRW--GKRFKHGRGVRKNLDKAL 125
+L IA SF+ QL A V ++ + LR + +V ++ G+ +++G+GVRK+ +A+
Sbjct: 9 MLGMIALSFS--QLVWADNV-PNFQETLRAAEQGVVAAQYNLGQMYRNGQGVRKDYAEAV 65
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAAQP----- 173
+ K A +G A + G+MY D A+ YR+AA G AQ
Sbjct: 66 KWYRKAAEQGYAQAQYNLGVMY---DNGRGVRQDYIQAVQWYRKAAEQGLADAQYNLGMM 122
Query: 174 -ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
AN + EAV+ + + G +AQY L L +G+GV + +A RWY +AAE
Sbjct: 123 YANGQGVRQDYAEAVRWFRKTAEQGLAKAQYNLGLSYAQGQGVSQDYVQAVRWYRKAAEQ 182
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---- 281
G+ A N + Y G+G+ + A +W ++AA+ GH AQ+ G+ ++ +G+ +
Sbjct: 183 GHADAQNNLGVMYDNGKGVRQDYTNAVQWYRKAAEQGHAGAQINLGM-MYEKGQGVHQNY 241
Query: 282 -KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
KAV + A G A + V+ +D A V
Sbjct: 242 AKAVEWYHKAAEQGHAQAQNNLGVMYDNGQGVRQDYAQAV 281
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GVR++ A+ + K A +G A ++ G+MY E +++
Sbjct: 192 GVMYDNGKGVRQDYTNAVQWYRKAAEQGHAGAQINLGMMY------EKGQGVHQ------ 239
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N +AV+ ++A+ GH +AQ L + G+GV + +A +WYL+AAE GY
Sbjct: 240 -------NYAKAVEWYHKAAEQGHAQAQNNLGVMYDNGQGVRQDYAQAVQWYLKAAEQGY 292
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN L Y G+G+ S A++W K+A C +G Q
Sbjct: 293 ADAQYNLGLMYEKGQGVRQSKIVAKEWFKKA--CANGDKQ 330
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+GVR++ +A+ F K A +G A + GL Y + A+ YR+A
Sbjct: 120 GMMYANGQGVRQDYAEAVRWFRKTAEQGLAKAQYNLGLSYAQGQGVSQDYVQAVRWYRKA 179
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + AV+ +A+ GH AQ L + +G+GV
Sbjct: 180 AEQGHADAQNNLGVMYDNGKGVRQDYTNAVQWYRKAAEQGHAGAQINLGMMYEKGQGVHQ 239
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N +A WY +AAE G+ +A N + Y G+G+ + QA +W +AA+ G+ AQ
Sbjct: 240 NYAKAVEWYHKAAEQGHAQAQNNLGVMYDNGQGVRQDYAQAVQWYLKAAEQGYADAQYNL 299
Query: 271 GLGLFTEGE 279
GL ++ +G+
Sbjct: 300 GL-MYEKGQ 307
>gi|148264042|ref|YP_001230748.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397542|gb|ABQ26175.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 557
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 23/229 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G+GV ++ +A +LK A +G++ A + GLMY++ D A + YR+AA G+
Sbjct: 160 GQGVSRDYVEAAKWYLKAAEQGNSGAQFNLGLMYYKGDGVARNFAEAFTWYRKAAEQGNA 219
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ P N EA +++ GHV AQ+ L +G EAA
Sbjct: 220 GAQFSLGLMYYKGQGVPKNFAEAAAWYRKSAEQGHVGAQFNLGYMYEMEQGAVGGNAEAA 279
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
+WY +AAE G+ A N Y GEG+P H +A KW ++AA+ G+ AQL G+ ++
Sbjct: 280 KWYRKAAEQGHAGAQSNLGYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGI-MYD 338
Query: 277 EGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G + +AV + A G+ A + V R+ A V
Sbjct: 339 NGHGISQDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEAV 387
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+GV ++ +A+ +LK A +G A ++ G+MY ++ VL
Sbjct: 82 GFMYEKGQGVLQDYAEAVKWYLKAAEQGHAGAQINVGIMY------------FKGQGVLP 129
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A EA K +A++ G+ AQ+ L L ++G+GV + EAA+WYL+AAE G
Sbjct: 130 DYA-------EAAKWYRKAALQGNANAQFNLGLMCNKGQGVSRDYVEAAKWYLKAAEQGN 182
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A +N L Y G+G+ + +A W ++AA+ G+ AQ GL ++ +G+
Sbjct: 183 SGAQFNLGLMYYKGDGVARNFAEAFTWYRKAAEQGNAGAQFSLGL-MYYKGQ 233
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G + G+GV KN +A + K A +G A + G MY EM++ A YR+
Sbjct: 226 GLMYYKGQGVPKNFAEAAAWYRKSAEQGHVGAQFNLGYMY-EMEQGAVGGNAEAAKWYRK 284
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ P + EA K +A+ G+ AQ L + G G+
Sbjct: 285 AAEQGHAGAQSNLGYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGIS 344
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +AAE G + A YN + Y+ G G+P ++ +A +W ++AAD GH +Q+
Sbjct: 345 QDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVN 404
Query: 270 HG 271
G
Sbjct: 405 LG 406
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV ++ +A + K A +G+ A ++ G+MY D EA + YR+
Sbjct: 298 GYIYDIGEGVPQDHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGISQDNAEA-VKWYRK 356
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ P N EAV+ +A+ GH +Q L GV
Sbjct: 357 AAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVNLGHLYENSDGVP 416
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ +A +WY +AAE A ++ L Y+ G+G P ++ +A KW +RAAD G+
Sbjct: 417 QDYAQALKWYGKAAEQENSDAQFSLGLMYAKGQGTPQNYAEAAKWYRRAADLGN 470
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G GV +N +A + K A +G+ A GLMY++ + K A A + YR++
Sbjct: 190 GLMYYKGDGVARNFAEAFTWYRKAAEQGNAGAQFSLGLMYYKGQGVPKNFAEAAAWYRKS 249
Query: 164 AVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A G AQ NAE A K +A+ GH AQ L G GV
Sbjct: 250 AEQGHVGAQFNLGYMYEMEQGAVGGNAE-AAKWYRKAAEQGHAGAQSNLGYIYDIGEGVP 308
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EAA+WY +AAE G A N + Y G G+ + +A KW ++AA+ G AQ
Sbjct: 309 QDHAEAAKWYRKAAEQGNAAAQLNLGIMYDNGHGISQDNAEAVKWYRKAAEQGDMTAQYN 368
Query: 270 HGL 272
G+
Sbjct: 369 MGV 371
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 168 DP-AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
DP A + AN E KL +I GHV AQ+ +G+GV + EA +WYL+AAE G
Sbjct: 54 DPRAVRSANIAEIRKL----AIEGHVDAQFYTGFMYEKGQGVLQDYAEAVKWYLKAAEQG 109
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A N + Y G+G+ + +A KW ++AA G+ AQ GL
Sbjct: 110 HAGAQINVGIMYFKGQGVLPDYAEAAKWYRKAALQGNANAQFNLGL 155
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 128 FLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ---------- 172
+ K A +G A + G +Y D EAA YR+AA G+ AAQ
Sbjct: 282 YRKAAEQGHAGAQSNLGYIYDIGEGVPQDHAEAA-KWYRKAAEQGNAAAQLNLGIMYDNG 340
Query: 173 ---PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
+ EAVK +A+ G + AQY + + G GV N EA WY +AA+ G+
Sbjct: 341 HGISQDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEAVEWYRKAADQGHEI 400
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ N Y +G+P + QA KW +AA+ + AQ GL ++ +G+
Sbjct: 401 SQVNLGHLYENSDGVPQDYAQALKWYGKAAEQENSDAQFSLGL-MYAKGQ 449
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-A 156
A L G + +G G+ ++ +A+ + K A +G A + G+ Y + + A A
Sbjct: 327 AAAQLNLGIMYDNGHGISQDNAEAVKWYRKAAEQGDMTAQYNMGVKYANGIGVPRNNAEA 386
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ YR+AA G +Q P + +A+K +A+ + AQ+ L L
Sbjct: 387 VEWYRKAADQGHEISQVNLGHLYENSDGVPQDYAQALKWYGKAAEQENSDAQFSLGLMYA 446
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+G+G N EAA+WY RAA+ G A YN ++ Y G G+ + + + +K AD
Sbjct: 447 KGQGTPQNYAEAAKWYRRAADLGNEIAYYNLAILYYKGLGVDRDYAETVRLLKEVAD 503
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ +G GV +N +A++ + K A +G ++ V+ G +Y D A+ Y +A
Sbjct: 370 GVKYANGIGVPRNNAEAVEWYRKAADQGHEISQVNLGHLYENSDGVPQDYAQALKWYGKA 429
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A + AQ P N EA K +A+ G+ A Y LA+ ++G GVD
Sbjct: 430 AEQENSDAQFSLGLMYAKGQGTPQNYAEAAKWYRRAADLGNEIAYYNLAILYYKGLGVDR 489
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ E R A+ ++ Y G+G+ H +A KW ++A D G
Sbjct: 490 DYAETVRLLKEVADQEDANVHFSLGYMYYKGQGVIEDHAEALKWFRKAGDEG 541
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
G+V A + T Y G+G+ + +A KW +AA+ GH AQ+ G+ F
Sbjct: 73 GHVDAQFYTGFMYEKGQGVLQDYAEAVKWYLKAAEQGHAGAQINVGIMYF 122
>gi|343515268|ref|ZP_08752327.1| Sel1 domain-containing protein [Vibrio sp. N418]
gi|342798800|gb|EGU34398.1| Sel1 domain-containing protein [Vibrio sp. N418]
Length = 443
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKE---AAISLY 160
L G+ + +GV +NL +AL+ + K A +G+ A + A ++ + + E AA+ Y
Sbjct: 140 LNVGRMLEFAQGVEENLQQALEWYHKAAEQGNAEAQYNMATMLAYGIGTDEDLGAALYWY 199
Query: 161 RQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
QAA AQ + N EA+K A+ GH AQ+ LA+ L+ G
Sbjct: 200 YQAAEQNHLEAQYSVALMLELGKGVEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGAD 259
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
++ N +A W+LRAAE G+V A YN + Y FG G + +A W AA+ GH AQ
Sbjct: 260 IEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGLGTEPNKTKAFIWYHHAAENGHADAQ 319
Query: 268 LE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
+ LG+ T +A + A + G AA + V+L+ +D M +
Sbjct: 320 FSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQD--MNEAIA 377
Query: 324 WRAMPS 329
W M +
Sbjct: 378 WYTMAA 383
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAV 165
+ HG G+ +N A +LK A +G A ++ G M E + + A+ Y +AA
Sbjct: 110 YYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRML-EFAQGVEENLQQALEWYHKAAE 168
Query: 166 LGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ AQ A A+ YQA+ H+ AQY +AL L G+GV+ N
Sbjct: 169 QGNAEAQYNMATMLAYGIGTDEDLGAALYWYYQAAEQNHLEAQYSVALMLELGKGVEKNK 228
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EA +WYL AA+ G+ A +N ++ FG + + A W RAA+ GH +AQ G+
Sbjct: 229 SEAIKWYLIAAQQGHAEAQFNLAMMLYFGADIEENKPDAFTWFLRAAEQGHVEAQYNVGM 288
Query: 273 ----GLFTEGEMMKAVVYLELATRAGETAA 298
GL TE KA ++ A G A
Sbjct: 289 MYDFGLGTEPNKTKAFIWYHHAAENGHADA 318
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 152 KKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQL 198
KE A L+ QAA G AQ P + +A + + QA+ G+ RAQY L
Sbjct: 47 NKEKAFELFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWMEQAAEQGNGRAQYHL 106
Query: 199 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
A + G G+ N A WYL+AAE G+ +A N F +G+ + +QA +W +A
Sbjct: 107 ATMYYHGDGISENRSMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENLQQALEWYHKA 166
Query: 259 ADCGHGKAQ------LEHGLG 273
A+ G+ +AQ L +G+G
Sbjct: 167 AEQGNAEAQYNMATMLAYGIG 187
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G + +N A FL+ A +G A + G+MY E +K +A I Y AA G
Sbjct: 257 GADIEENKPDAFTWFLRAAEQGHVEAQYNVGMMYDFGLGTEPNKTKAFI-WYHHAAENGH 315
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AQ P N +EA +A+ G V AQY L + L G+G++ ++ EA
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYFWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMNEA 375
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY AAE G + Y Y S + A W ++AA GH KAQ
Sbjct: 376 IAWYTMAAEQGDAESQYILGTLYHSNLEDFESKQLAMMWYQKAAKQGHEKAQ 427
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-YWEMDKKEA---AISLYRQAAVLGDP 169
G+GV KN +A+ +L A +G A + +M Y+ D +E A + + +AA G
Sbjct: 221 GKGVEKNKSEAIKWYLIAAQQGHAEAQFNLAMMLYFGADIEENKPDAFTWFLRAAEQGHV 280
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ N +A + A+ GH AQ+ LA G G N +EA
Sbjct: 281 EAQYNVGMMYDFGLGTEPNKTKAFIWYHHAAENGHADAQFSLASLYELGVGTPVNKKEAY 340
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY++AA+ G V A YN + G+G+ +A W AA+ G ++Q
Sbjct: 341 FWYVKAAKQGSVAAQYNLGVMLEAGKGIEQDMNEAIAWYTMAAEQGDAESQ 391
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L + + G G N ++A + +AA G+ A Y S Y FGE P+ QA +WM
Sbjct: 32 YDLGVQYYFGNGASINKEKAFELFSQAATDGHSEAQYYLSHMYYFGETTPVDKAQATRWM 91
Query: 256 KRAADCGHGKAQLE------HGLGL 274
++AA+ G+G+AQ HG G+
Sbjct: 92 EQAAEQGNGRAQYHLATMYYHGDGI 116
>gi|189502236|ref|YP_001957953.1| hypothetical protein Aasi_0854 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497677|gb|ACE06224.1| hypothetical protein Aasi_0854 [Candidatus Amoebophilus asiaticus
5a2]
Length = 684
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEA--AISLYRQA 163
G + G+GV K+ KA++ + K A +G A + GLMY E +K+A + Y +A
Sbjct: 214 GLMYSKGKGVEKDARKAVEWYEKAAEQGHAGAQFNLGLMYSNGEGVEKDARKELGWYEKA 273
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ +A +AV+ +A+ G+ RAQ+ L + +G GV+
Sbjct: 274 ANQGNVDAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGVEK 333
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G RA +N + YS GEG+ R+A +W ++AA+ G+ +AQ
Sbjct: 334 DARKAVEWYQKAANQGNARAQFNLGVMYSKGEGVEKDARKAVEWYEKAANQGNVEAQFNL 393
Query: 271 GLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G+ ++ GE + KAV + E A G+ A ++ + +D
Sbjct: 394 GV-MYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGLMYSKGKGVEKD 442
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEA--AISLYRQA 163
G + +G GV K+ K L + K A +G+ A + G+MY E +K+A A+ Y++A
Sbjct: 250 GLMYSNGEGVEKDARKELGWYEKAANQGNVDAQFNLGVMYAKGEGVEKDARKAVEWYQKA 309
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ +A +AV+ +A+ G+ RAQ+ L + +G GV+
Sbjct: 310 ANQGNARAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSKGEGVEK 369
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G V A +N + Y+ GEG+ R+A +W ++AA+ G AQ
Sbjct: 370 DARKAVEWYEKAANQGNVEAQFNLGVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNL 429
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
GL G E + KAV + + A G A V+ +D
Sbjct: 430 GLMYSKGKGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSNGEGVEKD 478
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 25/231 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV K+ KA++ F K A +G A + GLMY E D ++ A+ Y +
Sbjct: 178 GVMYFNGEGVEKDARKAVEWFQKAAEQGVAGAQFNLGLMYSKGKGVEKDARK-AVEWYEK 236
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ +A + + +A+ G+V AQ+ L + +G GV+
Sbjct: 237 AAEQGHAGAQFNLGLMYSNGEGVEKDARKELGWYEKAANQGNVDAQFNLGVMYAKGEGVE 296
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AA G RA +N + Y+ GEG+ R+A +W ++AA+ G+ +AQ
Sbjct: 297 KDARKAVEWYQKAANQGNARAQFNLGVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFN 356
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G+ ++++GE + KAV + E A G A V+ +D
Sbjct: 357 LGV-MYSKGEGVEKDARKAVEWYEKAANQGNVEAQFNLGVMYANGEGVEKD 406
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEA--AISLYRQA 163
G + G GV K+ KA++ + K A +G+ A + G+MY E +K+A A+ Y +A
Sbjct: 322 GVMYAKGEGVEKDARKAVEWYQKAANQGNARAQFNLGVMYSKGEGVEKDARKAVEWYEKA 381
Query: 164 AVLGDPAAQ------PANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ AN E +AV+ +A+ G AQ+ L L +G+GV+
Sbjct: 382 ANQGNVEAQFNLGVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGLMYSKGKGVEK 441
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G RA +N + YS GEG+ R+A +W ++AA+ G AQ
Sbjct: 442 DARKAVEWYQKAANQGNARAQFNLGVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNL 501
Query: 271 GLGLFTEGE 279
G+ +++ GE
Sbjct: 502 GV-MYSNGE 509
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV K+ KA++ + K A +G A + GLMY E D ++A + Y++
Sbjct: 394 GVMYANGEGVEKDARKAVEWYEKAAEQGDATAQFNLGLMYSKGKGVEKDARKA-VEWYQK 452
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ +A +AV+ +A+ G AQ+ L + G GV+
Sbjct: 453 AANQGNARAQFNLGVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGVE 512
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++ WY +AAE G A +N + YS G G+ ++ +W K+AA G+ AQ
Sbjct: 513 KDAKKELEWYKKAAEQGDATAQFNLGVMYSKGLGVEKDAKKELEWYKKAAAQGNASAQFN 572
Query: 270 ----HGLGLFTEGEMMKAVVYLELATRAGETAADH 300
+G GL E + K + + E A G A H
Sbjct: 573 LGVRYGEGLGVEKDAKKELEWYEKAAEQGHVKAQH 607
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 24/220 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISL--YRQA 163
G + +G GV K+ KA++ + K A +G A + G+MY E +K+A L Y++A
Sbjct: 466 GVMYSNGEGVEKDARKAVEWYEKAAEQGDATAQFNLGVMYSNGEGVEKDAKKELEWYKKA 525
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ +A++ ++ +A+ G+ AQ+ L + G GV+
Sbjct: 526 AEQGDATAQFNLGVMYSKGLGVEKDAKKELEWYKKAAAQGNASAQFNLGVRYGEGLGVEK 585
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++ WY +AAE G+V+A +N + Y+ GEG ++ +A +W +AA+ AQ
Sbjct: 586 DAKKELEWYEKAAEQGHVKAQHNLAWMYANGEGTAQNYTKAIEWYGKAAEKEDADAQFNL 645
Query: 271 GLGLFTEGEMM-----KAVVYLELATRAGE-TAADHVKNV 304
G ++ +GE + KA + + A G+ A + +KN+
Sbjct: 646 GQ-MYEKGEGVAKDCAKAAEWYQKAAEKGDLDAQERLKNM 684
>gi|298372182|ref|ZP_06982172.1| TPR repeat protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275086|gb|EFI16637.1| TPR repeat protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 372
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G GV ++ KA + + A +G + A + G+ Y E E AI Y++A
Sbjct: 153 GVCYSEGEGVEQSYSKAAYWYERAAEQGHSNAQYNIGVCYDEGKGVEQSYSKAIYWYKKA 212
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + +A+ +A+ GH +AQ+ L +C G+GV+
Sbjct: 213 AEQGNSDAQCNLGFYYSQGQGVEQSYSKAIYWYKKAAEQGHSKAQFNLGVCYDEGKGVEQ 272
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY +AAE G+ +A YN +CY G G+ S+ +A W K+AA+ GH AQ
Sbjct: 273 SYSKAIYWYKKAAEQGHSKAQYNIGVCYYNGNGVEQSYSKAAYWYKKAAEQGHSVAQFNL 332
Query: 271 GLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVI 305
G + E KA+ + A E A N I
Sbjct: 333 GTCYYNGNGVEKSKTKAIYWFRKACNNFEDKACEALNEI 371
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 25/193 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV ++ KA+ + K A +G+++A + G Y ++ E Y +AA + A
Sbjct: 84 YNEGKGVEQSYSKAIYWYKKAAEQGNSVAQCNIGFCY---NEGEGVEQSYSKAAYWWEKA 140
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ N+ AQ + +C G GV+ + +AA WY RAAE G+ A
Sbjct: 141 AEQGNS----------------VAQCNIGVCYSEGEGVEQSYSKAAYWYERAAEQGHSNA 184
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVV 285
YN +CY G+G+ S+ +A W K+AA+ G+ AQ G +++G+ + KA+
Sbjct: 185 QYNIGVCYDEGKGVEQSYSKAIYWYKKAAEQGNSDAQCNLGF-YYSQGQGVEQSYSKAIY 243
Query: 286 YLELATRAGETAA 298
+ + A G + A
Sbjct: 244 WYKKAAEQGHSKA 256
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ ++ C + G+GV+ + +A WY +AAE G A N CY+ GEG+ S+
Sbjct: 72 GDSDAQCKIGFCYNEGKGVEQSYSKAIYWYKKAAEQGNSVAQCNIGFCYNEGEGVEQSYS 131
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
+A W ++AA+ G+ AQ G+ ++EGE + KA + E A G + A +
Sbjct: 132 KAAYWWEKAAEQGNSVAQCNIGV-CYSEGEGVEQSYSKAAYWYERAAEQGHSNAQY 186
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 190 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ AQ L + G GV+ + +AA W RAAE G A CY+ G+G+ S+
Sbjct: 35 GNANAQKTLGSYYYLGSNGVEQSYSKAAYWLERAAEQGDSDAQCKIGFCYNEGKGVEQSY 94
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
+A W K+AA+ G+ AQ G + EGE + KA + E A G + A
Sbjct: 95 SKAIYWYKKAAEQGNSVAQCNIGF-CYNEGEGVEQSYSKAAYWWEKAAEQGNSVA 148
>gi|154498247|ref|ZP_02036625.1| hypothetical protein BACCAP_02235 [Bacteroides capillosus ATCC
29799]
gi|150272794|gb|EDM99962.1| Sel1 repeat protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 1017
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 97/191 (50%), Gaps = 21/191 (10%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEM 150
R AM +L G +++G GV K+ +A++ + + A +G +A+ D GL Y E
Sbjct: 516 RNFARAMDIL--GDCYRNGTGVEKDEVRAVELYRQAAEQGYAMAICDLGLCYEMGSGVER 573
Query: 151 DKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQ 197
D+K+A + YR+AA +G P AQ EEAVK A+ G+ RAQ
Sbjct: 574 DEKKA-VEHYRKAAQMGYPGAQCNLGYCCLEGVGTVKRPEEAVKWFRLAAEQGYPRAQSL 632
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L CL G G + +EA +WY +AAE GY A + LCY G+G +A + +R
Sbjct: 633 LGSCLRDGMGTQPDEKEAVKWYTKAAEQGYPPAQCSLGLCYENGDGTQQDPVRAAELYRR 692
Query: 258 AADCGHGKAQL 268
AAD G+ AQ
Sbjct: 693 AADQGYAPAQC 703
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ GRGV K+L+KA + + +GA + A+ D GL Y E D+K+ A LYR+
Sbjct: 310 GCLYQDGRGVEKDLEKAAEYYRRGAEQNYPPALCDLGLCYETGEGVEKDEKKGA-ELYRR 368
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+ L AQ N EEAV L +A+ + RA L CL G GV+
Sbjct: 369 SGELDYAPAQCNLGFCLLNGIGVDKNEEEAVAWLKRAAEQDYPRAISILGDCLGEGTGVE 428
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A Y RAA+ GYV A LCY G G+ +QA W RAA+ G+ AQ
Sbjct: 429 KDEAASAACYQRAADLGYVPAQCALGLCYETGGGVERDEKQAVAWYTRAAEQGYAPAQCN 488
Query: 270 HGL----GLFTEGEMMKAVVYLELATR 292
+ G+ E + +AV++L+ A
Sbjct: 489 LAVCCLNGIGMEPDAAQAVIWLKKAVE 515
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G G + + +A+ + K A +G A GL Y D + A LYR+A
Sbjct: 634 GSCLRDGMGTQPDEKEAVKWYTKAAEQGYPPAQCSLGLCYENGDGTQQDPVRAAELYRRA 693
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ P + +AV+ L +A+ RA L C RG GV
Sbjct: 694 ADQGYAPAQCNLAVCYLNGIGVPEDDGQAVEWLKRAAEQDFGRALNILGDCFRRGVGVQQ 753
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q A Y +A + GYV A + CY GEG+P +A ++ R A G AQ
Sbjct: 754 DPQRAVEHYRQAIKAGYVSAFCSLGYCYEVGEGVPEDKVKAVEYYTRGAQGGDETAQCNL 813
Query: 271 GL----GLFTEGEMMKAVVYLELATRAG 294
G G+ + + + V +L A + G
Sbjct: 814 GYCYLEGIGAKKDPGRGVSWLHKAAKQG 841
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G F+ G GV+++ +A++ + + G A G Y E+ + K A+ Y +
Sbjct: 742 GDCFRRGVGVQQDPQRAVEHYRQAIKAGYVSAFCSLGYCY-EVGEGVPEDKVKAVEYYTR 800
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A GD AQ + V L++A+ G +RA L C G GV
Sbjct: 801 GAQGGDETAQCNLGYCYLEGIGAKKDPGRGVSWLHKAAKQGSLRAMCLLGGCYRDGTGVM 860
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++ + RAAE GY A N LCY G G+ + +A +W RAA+ G AQ
Sbjct: 861 KDDKKCVEYLTRAAEQGYAPAQCNLGLCYEQGTGVAVDATRAVEWYTRAAESGDRAAQCN 920
Query: 270 HGLGLFT 276
G L
Sbjct: 921 LGYCLLN 927
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G ++ G GV ++L+KA++ + + A G A + G Y AAI + +
Sbjct: 234 LCDLGLCYESGSGVDEDLEKAVECYTQSAEEGYAPAQCNLGYCYL------AAIGVEQDD 287
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHR-GRGVDFNLQEAARWYLRA 222
A + A+ A E + RA +L CL++ GRGV+ +L++AA +Y R
Sbjct: 288 AKAAEWLAKSAEQE-------------YPRA-LRLMGCLYQDGRGVEKDLEKAAEYYRRG 333
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEG 278
AE Y A+ + LCY GEG+ ++ + +R+ + + AQ G G+ +
Sbjct: 334 AEQNYPPALCDLGLCYETGEGVEKDEKKGAELYRRSGELDYAPAQCNLGFCLLNGIGVDK 393
Query: 279 EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
+AV +L+ A A + L + + +D A
Sbjct: 394 NEEEAVAWLKRAAEQDYPRAISILGDCLGEGTGVEKDEA 432
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EE LL QA + G + AQY LA+ G GVD ++ +AA W+ +AAE +RA+
Sbjct: 37 EEFQALLDQAEL-GDLSAQYDLAMKYADGDGVDRDMAQAAHWFAQAAEQDDMRAVEALGR 95
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
CY GEG+ ++A + +R D + Q GL
Sbjct: 96 CYQLGEGVEQDEKRAVELFQRCVDEDYAPGQCSLGL 131
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 94/235 (40%), Gaps = 23/235 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G G GV K+ + + + A G A GL Y E D+K+A ++ Y +
Sbjct: 418 GDCLGEGTGVEKDEAASAACYQRAADLGYVPAQCALGLCYETGGGVERDEKQA-VAWYTR 476
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ +A +AV L +A RA L C G GV+
Sbjct: 477 AAEQGYAPAQCNLAVCCLNGIGMEPDAAQAVIWLKKAVERNFARAMDILGDCYRNGTGVE 536
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ A Y +AAE GY A+ + LCY G G+ ++A + ++AA G+ AQ
Sbjct: 537 KDEVRAVELYRQAAEQGYAMAICDLGLCYEMGSGVERDEKKAVEHYRKAAQMGYPGAQCN 596
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G G+ T +AV + LA G A + L+ T D V
Sbjct: 597 LGYCCLEGVGTVKRPEEAVKWFRLAAEQGYPRAQSLLGSCLRDGMGTQPDEKEAV 651
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +++G GV + +A + + A +G A + G+ Y E D + A+ L RQ
Sbjct: 130 GLCYENGSGVDHDPVRAAELYQLSADQGYAPAQCNLGVCYLNGIGVERDD-DHAVELLRQ 188
Query: 163 AA---------VLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A +LG D + +A +L A+ ++ A L LC G GVD
Sbjct: 189 SAEQEFPRGISLLGCCYRDGRGVEPDQAKAAELFRLAAEKRYIPALCDLGLCYESGSGVD 248
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+L++A Y ++AE GY A N CY G+ +A +W+ ++A+
Sbjct: 249 EDLEKAVECYTQSAEEGYAPAQCNLGYCYLAAIGVEQDDAKAAEWLAKSAE 299
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
AM LL G ++ G GV K+ K ++ + A +G A + GL Y ++ +++
Sbjct: 845 AMCLL--GGCYRDGTGVMKDDKKCVEYLTRAAEQGYAPAQCNLGLCY----EQGTGVAV- 897
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+A AV+ +A+ +G AQ L CL G G N A W+
Sbjct: 898 --------------DATRAVEWYTRAAESGDRAAQCNLGYCLLNGIGTARNPAGAVEWFK 943
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
RA + G VRAM + C G G +A + + AA
Sbjct: 944 RAVKQGSVRAMNLLADCCRDGVGTETDLARAEQLYQEAA 982
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDP 169
++ G GV +++ +A F + A + A+ G Y LG+
Sbjct: 60 KYADGDGVDRDMAQAAHWFAQAAEQDDMRAVEALGRCYQ-----------------LGEG 102
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
Q + + AV+L + + Q L LC G GVD + AA Y +A+ GY
Sbjct: 103 VEQ--DEKRAVELFQRCVDEDYAPGQCSLGLCYENGSGVDHDPVRAAELYQLSADQGYAP 160
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
A N +CY G G+ A + ++++A+
Sbjct: 161 AQCNLGVCYLNGIGVERDDDHAVELLRQSAE 191
>gi|325267697|ref|ZP_08134348.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980821|gb|EGC16482.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 702
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 91 WNDALRPLREAMVLLRWGK---------RFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
W D + R+ + L G + +G+GVR++ +A+ + + A +G A
Sbjct: 22 WADDVSDFRQTLQLAEQGDAEAQFNLGLMYYNGQGVRQDYAEAVKWYRQAAEQGDASAQN 81
Query: 142 DAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLL 183
+ GLMY D EA + YRQAA GD AQ N EAVK
Sbjct: 82 NLGLMYDNGYGVRQDYAEA-VKWYRQAAEQGDAEAQSNLGVMYDKGYGVRQNYAEAVKWY 140
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
QA+ G +AQY L + GRGV + EA +WY +AAE G A N Y G+G
Sbjct: 141 RQAAEQGFAQAQYNLGVMYETGRGVRQDYAEAVKWYRQAAEQGDAEAQNNLGAMYDSGQG 200
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ ++ +A +W ++AA+ GH +AQ G
Sbjct: 201 VRQNYAEALRWYRQAAEQGHAEAQFNLG 228
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+++GRGVR++ +AL + K A +G T A + G MY D EA + YRQAA
Sbjct: 267 YENGRGVRQDYAEALRWYRKAAEQGHTEAQNNLGAMYGNGHGVHQDDAEA-VKWYRQAAE 325
Query: 166 LGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ AQ + EA++ +A+ GH AQ+ L GRGV +
Sbjct: 326 QGNAEAQNNLGAMYDSGDGVRQDYAEALRWYRKAAEQGHAAAQFNLGAMYDSGRGVRQDY 385
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EA RWY +AAE G+ A +N Y G+G+ + +A +W +AA+ G+ +AQ G+
Sbjct: 386 AEAFRWYRQAAEQGHAEAQFNLGAMYDNGDGVRQDYAEAFRWFHKAAEQGYAEAQNNLGV 445
Query: 273 GLFT 276
+
Sbjct: 446 MYYN 449
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G ++ GRGVR++ +A+ + + A +G A + G MY D + A+ Y
Sbjct: 156 GVMYETGRGVRQDYAEAVKWYRQAAEQGDAEAQNNLGAMY---DSGQGVRQNYAEALRWY 212
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
RQAA G AQ + EAVK QA+ G+ AQ L L GRG
Sbjct: 213 RQAAEQGHAEAQFNLGSMYYNGQDVQQDYAEAVKWYRQAADQGNAEAQNNLGLLYENGRG 272
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + EA RWY +AAE G+ A N Y G G+ +A KW ++AA+ G+ +AQ
Sbjct: 273 VRQDYAEALRWYRKAAEQGHTEAQNNLGAMYGNGHGVHQDDAEAVKWYRQAAEQGNAEAQ 332
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 23/233 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQA 163
G + +G GVR++ ++ F K A +G +A + G MY D +++ A +L YRQA
Sbjct: 444 GVMYYNGYGVRQDYAESFRWFRKAAEQGVAVAQYNLGAMYDNGDGVRQDYAEALRWYRQA 503
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A AQ + EA++ +A+ G+V AQ L + G GV
Sbjct: 504 AEQEYAEAQNDLGVMYYNGSGVRQDYAEALRWYRKAAEQGNVEAQNNLGVMYDNGHGVRQ 563
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA RW+ +AAE GY A YN Y++G G+ +A KW ++AA+ +AQ
Sbjct: 564 DYAEALRWFRKAAEQGYAEAQYNLGAMYAYGRGVRQDDTEAVKWFRQAAEKRFPQAQYNL 623
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
G+ ++ G + +AV + A G T A + ++ +DR +
Sbjct: 624 GV-MYAYGRGVRQDDTEAVKWFRQAAAQGLTQAQYNLGIMYYSGRGVRQDRTL 675
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GVR++ +AL + K A +G A + G MY D EA YRQ
Sbjct: 336 GAMYDSGDGVRQDYAEALRWYRKAAEQGHAAAQFNLGAMYDSGRGVRQDYAEA-FRWYRQ 394
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EA + ++A+ G+ AQ L + + G GV
Sbjct: 395 AAEQGHAEAQFNLGAMYDNGDGVRQDYAEAFRWFHKAAEQGYAEAQNNLGVMYYNGYGVR 454
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ E+ RW+ +AAE G A YN Y G+G+ + +A +W ++AA+ + +AQ +
Sbjct: 455 QDYAESFRWFRKAAEQGVAVAQYNLGAMYDNGDGVRQDYAEALRWYRQAAEQEYAEAQND 514
Query: 270 HGLGLFT 276
G+ +
Sbjct: 515 LGVMYYN 521
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQA 163
G + +G GV ++ +A+ + + A +G+ A + G MY D +++ A +L YR+A
Sbjct: 300 GAMYGNGHGVHQDDAEAVKWYRQAAEQGNAEAQNNLGAMYDSGDGVRQDYAEALRWYRKA 359
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AAQ + EA + QA+ GH AQ+ L G GV
Sbjct: 360 AEQGHAAAQFNLGAMYDSGRGVRQDYAEAFRWYRQAAEQGHAEAQFNLGAMYDNGDGVRQ 419
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA RW+ +AAE GY A N + Y G G+ + ++ +W ++AA+ G AQ
Sbjct: 420 DYAEAFRWFHKAAEQGYAEAQNNLGVMYYNGYGVRQDYAESFRWFRKAAEQGVAVAQYNL 479
Query: 271 GLGLFTEGEMMK 282
G ++ G+ ++
Sbjct: 480 GA-MYDNGDGVR 490
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 19/177 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GVR++ +AL + K A +G+ A + G+MY D EA + +R+
Sbjct: 516 GVMYYNGSGVRQDYAEALRWYRKAAEQGNVEAQNNLGVMYDNGHGVRQDYAEA-LRWFRK 574
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EAVK QA+ +AQY L + GRGV
Sbjct: 575 AAEQGYAEAQYNLGAMYAYGRGVRQDDTEAVKWFRQAAEKRFPQAQYNLGVMYAYGRGVR 634
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ EA +W+ +AA G +A YN + Y G G+ A++W +A G+ K
Sbjct: 635 QDDTEAVKWFRQAAAQGLTQAQYNLGIMYYSGRGVRQDRTLAQEWFGKACQNGYQKG 691
>gi|365834905|ref|ZP_09376343.1| Sel1 repeat protein [Hafnia alvei ATCC 51873]
gi|364567745|gb|EHM45398.1| Sel1 repeat protein [Hafnia alvei ATCC 51873]
Length = 717
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------P 173
S LK A +G A G Y+E ++ + A+ Y++AA G AQ P
Sbjct: 29 SLLKEAQQGDASAQNKIGDSYFEEEEYQQALIWYQKAADQGFITAQINLAYMYDDGDGVP 88
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N ++AV +A+ G+ AQ+ LAL G+GV + ++A WY +AAE GY A +N
Sbjct: 89 KNDQQAVVWYRKAAEQGNANAQFNLALKYDEGKGVPLDNKQAVAWYQKAAEQGYAFAQFN 148
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELA 290
+L Y G+G+PL RQA W ++AA+ G+ AQ G + GE + ++L ++
Sbjct: 149 LALKYGEGQGIPLDDRQAVVWYQKAAEQGYADAQNNLG-AAYQNGEGVPRNIHLAIS 204
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 82 RAASLVCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
R + K +ND++ ++ + K++ HG G K+ KAL S+ + A
Sbjct: 370 RIINFFVKDFNDSIAWIKNEKTVDDIAEEFTLSKKYDHGNGTIKDYQKALLSWYQQTA-- 427
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQ 195
+ D EA +L R +L D P N +AV +++ +V AQ
Sbjct: 428 -------------DRDDAEAQYNLGR---MLEDGTGVPQNPRQAVVWYKKSAEQDYVVAQ 471
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y LAL G + N +A WY +AAE GY A N + Y +G+P + +A W
Sbjct: 472 YSLALMYDLGNKIPQNYPQALIWYTKAAEQGYAVAQNNLAAMYGNAKGIPRDNNKALIWY 531
Query: 256 KRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
++A+ G AQ G G T + KA+++ A G + A
Sbjct: 532 TKSAEQGFCIAQYNVGQVYENGSGTPIDYHKALMWYTKAAEKGASVA 578
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ------ 172
+AL + K A +G A ++ MY + D + A+ YR+AA G+ AQ
Sbjct: 57 QALIWYQKAADQGFITAQINLAYMYDDGDGVPKNDQQAVVWYRKAAEQGNANAQFNLALK 116
Query: 173 -------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
P + ++AV +A+ G+ AQ+ LAL G+G+ + ++A WY +AAE
Sbjct: 117 YDEGKGVPLDNKQAVAWYQKAAEQGYAFAQFNLALKYGEGQGIPLDDRQAVVWYQKAAEQ 176
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
GY A N Y GEG+P + A W +++A+
Sbjct: 177 GYADAQNNLGAAYQNGEGVPRNIHLAISWYEKSAE 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GV KN +A+ + K A +G+ A + L Y E +D K+A ++ Y++AA
Sbjct: 81 YDDGDGVPKNDQQAVVWYRKAAEQGNANAQFNLALKYDEGKGVPLDNKQA-VAWYQKAAE 139
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G AQ P + +AV +A+ G+ AQ L G GV N+
Sbjct: 140 QGYAFAQFNLALKYGEGQGIPLDDRQAVVWYQKAAEQGYADAQNNLGAAYQNGEGVPRNI 199
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A WY ++AE A N Y G+G+P ++A WM+R+ GKA+ ++ L
Sbjct: 200 HLAISWYEKSAEQENYTAESNLEKIYRSGDGVPKDTQKANFWMQRSY-AEQGKAKYQNSL 258
Query: 273 G-LFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
L+ G + KA ++ + + G A + +I + + D
Sbjct: 259 ATLYYNGTGVSQDYQKAAIWFQKSANQGYAMAQYNLGLIYEYGKGVTPD 307
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV +N+ A+ + K A + + A + ++K +YR G
Sbjct: 186 GAAYQNGEGVPRNIHLAISWYEKSAEQENYTAESN-------LEK------IYRS----G 228
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQ--LALCLHRGRGVDFNLQEAARWYLRAAEG 225
D P + ++A Q S A +A+YQ LA + G GV + Q+AA W+ ++A
Sbjct: 229 DGV--PKDTQKA-NFWMQRSYAEQGKAKYQNSLATLYYNGTGVSQDYQKAAIWFQKSANQ 285
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
GY A YN L Y +G+G+ A W +AA+ KAQ
Sbjct: 286 GYAMAQYNLGLIYEYGKGVTPDFPLALSWYTKAAEKDDIKAQ 327
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 91/238 (38%), Gaps = 31/238 (13%)
Query: 68 VLNKIAASFTLPQ--------LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK 119
++ IA FTL + ++ SW +A G+ + G GV +
Sbjct: 391 TVDDIAEEFTLSKKYDHGNGTIKDYQKALLSWYQQTADRDDAEAQYNLGRMLEDGTGVPQ 450
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMY---------------WEMDKKEA--AISLYRQ 162
N +A+ + K A + +A LMY W E A++
Sbjct: 451 NPRQAVVWYKKSAEQDYVVAQYSLALMYDLGNKIPQNYPQALIWYTKAAEQGYAVAQNNL 510
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA+ G+ P + +A+ +++ G AQY + G G + +A WY +A
Sbjct: 511 AAMYGNAKGIPRDNNKALIWYTKSAEQGFCIAQYNVGQVYENGSGTPIDYHKALMWYTKA 570
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 274
AE G A Y G G+ ++ A +W ++ G+ +A+ +GLG+
Sbjct: 571 AEKGASVAYVKIGHIYRDGRGVAQNYTTAIEWYQKGIASGNIEAKTSLAEMSYYGLGV 628
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +++G G + KAL + K A +G+++A V G +Y + G
Sbjct: 547 GQVYENGSGTPIDYHKALMWYTKAAEKGASVAYVKIGHIYRD-----------------G 589
Query: 168 DPAAQPANAEEAVKLLYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
AQ N A++ YQ IA G++ A+ LA + G GV N Q+A Y A+ G
Sbjct: 590 RGVAQ--NYTTAIEW-YQKGIASGNIEAKTSLAEMSYYGLGVAQNYQKAFSQYEELAKQG 646
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
Y Y GEG+ + QA W A G K
Sbjct: 647 YASPQSTLGYLYENGEGVAKDYIQAWAWYAVAVYNGEQK 685
>gi|325267696|ref|ZP_08134347.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980820|gb|EGC16481.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 344
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 26/228 (11%)
Query: 84 ASLVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
S V + + +ALR +R+A + G +++G GVR++ +A+ + K A +G+
Sbjct: 90 GSGVHQDYAEALRWIRQAAEQGHAEAQINLGAMYENGLGVRQDDAEAVRWYRKAAEQGNA 149
Query: 138 LAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQPANAE-------------EA 179
+ GL+Y D EA + YR+AA GD AQ E EA
Sbjct: 150 AIQYNLGLLYENGRNVRQDYAEA-VRWYRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEA 208
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
VK QA+ G AQ+ L G+GV + EA +WY +AA+ G +A YN L Y
Sbjct: 209 VKWYRQAAAQGFAEAQFNLGAMYDNGQGVHQDYAEAVKWYRQAADQGNAKAQYNLGLLYD 268
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
G G+ + +A KW ++AAD G+ AQ G G++ G+ + ++L
Sbjct: 269 NGRGVHQDYAEAVKWYRQAADQGNADAQYHLG-GMYHNGQGVHQDLHL 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + + +ALR +R+A G + G GV ++ +AL + A +G A
Sbjct: 57 VRQDYAEALRWIRQAAEQGVAAAQNNLGMLYYTGSGVHQDYAEALRWIRQAAEQGHAEAQ 116
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKL 182
++ G MY D EA + YR+AA G+ A Q + EAV+
Sbjct: 117 INLGAMYENGLGVRQDDAEA-VRWYRKAAEQGNAAIQYNLGLLYENGRNVRQDYAEAVRW 175
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A+ G AQY L H G+GV + EA +WY +AA G+ A +N Y G+
Sbjct: 176 YRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEAVKWYRQAAAQGFAEAQFNLGAMYDNGQ 235
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
G+ + +A KW ++AAD G+ KAQ GL L+ G
Sbjct: 236 GVHQDYAEAVKWYRQAADQGNAKAQYNLGL-LYDNG 270
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A + G +++GR VR++ +A+ + K A +G A G MY D EA
Sbjct: 149 AAIQYNLGLLYENGRNVRQDYAEAVRWYRKAAEQGDAEAQYHLGEMYHNGQGVRQDYAEA 208
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+ YRQAA G AQ + EAVK QA+ G+ +AQY L L
Sbjct: 209 -VKWYRQAAAQGFAEAQFNLGAMYDNGQGVHQDYAEAVKWYRQAADQGNAKAQYNLGLLY 267
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV + EA +WY +AA+ G A Y+ Y G+G+ +++W A + G
Sbjct: 268 DNGRGVHQDYAEAVKWYRQAADQGNADAQYHLGGMYHNGQGVHQDLHLSKEWFGTACNRG 327
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ+ L L + G+GV + EA RW +AAE G A N + Y G G+ + +A +
Sbjct: 43 AQFNLGLMYYNGQGVRQDYAEALRWIRQAAEQGVAAAQNNLGMLYYTGSGVHQDYAEALR 102
Query: 254 WMKRAADCGHGKAQL------EHGLGL 274
W+++AA+ GH +AQ+ E+GLG+
Sbjct: 103 WIRQAAEQGHAEAQINLGAMYENGLGV 129
>gi|340363634|ref|ZP_08685957.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339885313|gb|EGQ75042.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 420
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G R++ G+GVR+N ++A+ + K A +G A G+MY E A+ YR+A
Sbjct: 161 GLRYEQGQGVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANGRGVRQNDEEAVRWYRKA 220
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ N EEA + +A+ G V AQ L G+GV
Sbjct: 221 AEQGLATAQYHLGVMYANRRGVRQNYEEAAQWYRKAAEQGDVDAQNNLGALYDEGQGVRQ 280
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA RWY +AAE GYV A N + YS G+G+ + +A +W ++AA+ HG A +H
Sbjct: 281 DSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQDYPEALRWYRKAAE--HGFAAAQH 338
Query: 271 GLG-LFTEG 278
LG ++ EG
Sbjct: 339 NLGEMYYEG 347
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + +GRGVR+N ++A+ + K A +G A G+MY E A YR+A
Sbjct: 197 GVMYANGRGVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANRRGVRQNYEEAAQWYRKA 256
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ ++ EAV+ +A+ G+V AQ L + G+GV
Sbjct: 257 AEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQ 316
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA RWY +AAE G+ A +N Y G+G+ ++ +A +W +AA+ G AQ
Sbjct: 317 DYPEALRWYRKAAEHGFAAAQHNLGEMYYEGKGVHQNYPEALQWYLKAAEQGFSPAQNRL 376
Query: 271 GLGLFTEGE 279
G ++ EG+
Sbjct: 377 GE-MYEEGQ 384
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
E+ V + G + G GVR++ +A+ + K A +G A + +MY+ E
Sbjct: 49 ESDVQVILGSMYLRGIGVRQSDQEAVRWYRKAAEQGQAEAQYNLCMMYYVGQGVNQDHEQ 108
Query: 156 AISLYRQAAVLGDPAAQP---------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
A+ R AA G AQ N EA K L +A+ G V AQY L L +G+
Sbjct: 109 AMEWCRSAADKGYLPAQNNLGMMYGVLQNYVEATKWLQKAAEQGSVNAQYNLGLRYEQGQ 168
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV N +EA RWY +AAE G A Y+ + Y+ G G+ + +A +W ++AA+ G A
Sbjct: 169 GVRQNDEEAVRWYRKAAEQGLATAQYHLGVMYANGRGVRQNDEEAVRWYRKAAEQGLATA 228
Query: 267 QLEHGL 272
Q G+
Sbjct: 229 QYHLGV 234
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + + RGVR+N ++A + K A +G A + G +Y E D EA + YR+
Sbjct: 233 GVMYANRRGVRQNYEEAAQWYRKAAEQGDVDAQNNLGALYDEGQGVRQDSAEA-VRWYRK 291
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EA++ +A+ G AQ+ L + G+GV
Sbjct: 292 AAERGYVVAQNNLGVAYSEGQGVRQDYPEALRWYRKAAEHGFAAAQHNLGEMYYEGKGVH 351
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N EA +WYL+AAE G+ A Y G+G+P + + A++W K+A D G
Sbjct: 352 QNYPEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVPKNRKVAKEWHKKACDNG 404
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 164 AVLGDPAAQPANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
A+L Q A A+E +K + Q + AG Q L RG GV + QEA RWY +
Sbjct: 20 ALLALGIGQAAWADEVPNLKKIVQRAEAGESDVQVILGSMYLRGIGVRQSDQEAVRWYRK 79
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 281
AAE G A YN + Y G+G+ H QA +W + AAD G+ AQ G+ +
Sbjct: 80 AAEQGQAEAQYNLCMMYYVGQGVNQDHEQAMEWCRSAADKGYLPAQNNLGMMYGVLQNYV 139
Query: 282 KAVVYLELATRAGETAADH 300
+A +L+ A G A +
Sbjct: 140 EATKWLQKAAEQGSVNAQY 158
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR++ +A+ + K A RG +A + G+ Y E D EA + YR+
Sbjct: 269 GALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQDYPEA-LRWYRK 327
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AAQ N EA++ +A+ G AQ +L G+GV
Sbjct: 328 AAEHGFAAAQHNLGEMYYEGKGVHQNYPEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVP 387
Query: 210 FNLQEAARWYLRAAEGGY 227
N + A W+ +A + G+
Sbjct: 388 KNRKVAKEWHKKACDNGF 405
>gi|90416741|ref|ZP_01224671.1| hypothetical protein GB2207_03799 [gamma proteobacterium HTCC2207]
gi|90331494|gb|EAS46730.1| hypothetical protein GB2207_03799 [marine gamma proteobacterium
HTCC2207]
Length = 322
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV ++ +A+ F K A +G A G MY + + A+ +++A
Sbjct: 76 GYMYADGLGVPESGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKA 135
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AAQ P +A EAVK +A+ G VRAQY L L G GV
Sbjct: 136 ADQGYAAAQYNLGNMYRTGEGVPESAAEAVKWYRKAAGQGDVRAQYNLGLMYADGDGVPE 195
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
N EA +WY +AAE G A YN Y+ G G+P + +A KW ++AA G AQ
Sbjct: 196 NGAEAVKWYRKAAEQGDADAQYNLGYMYADGLGVPENDAEAVKWFRKAAAQGRADAQSKL 255
Query: 268 -LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+G G ++A V+ +A G+T A
Sbjct: 256 GFMYGTGKGVPENSIRAYVWFSMAKTQGDTGA 287
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV +N +A+ F K A +G A G MY + + A+ +++A
Sbjct: 40 GVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKA 99
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + EAVK +A+ G+ AQY L G GV
Sbjct: 100 ADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNLGNMYRTGEGVPE 159
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA +WY +AA G VRA YN L Y+ G+G+P + +A KW ++AA+ G AQ
Sbjct: 160 SAAEAVKWYRKAAGQGDVRAQYNLGLMYADGDGVPENGAEAVKWYRKAAEQGDADAQYNL 219
Query: 271 GLGLFTEG 278
G ++ +G
Sbjct: 220 GY-MYADG 226
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + Y + D P N EAVK +A+ G AQY L G GV + EA
Sbjct: 33 ATAQYNLGVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEA 92
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+W+ +AA+ G A Y Y+ G G+P S +A KW K+AAD G+ AQ G ++
Sbjct: 93 VKWFKKAADQGDADAQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNLG-NMY 151
Query: 276 TEGE 279
GE
Sbjct: 152 RTGE 155
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQY L + G GV N EA +W+ +AA+ G A Y Y+ G G+P S
Sbjct: 31 GVATAQYNLGVMYADGDGVPENGTEAVKWFKKAADQGDADAQYTLGYMYADGLGVPESGT 90
Query: 250 QARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADH 300
+A KW K+AAD G AQ GLG+ G +AV + + A G AA +
Sbjct: 91 EAVKWFKKAADQGDADAQYTLGYMYADGLGVPESG--TEAVKWFKKAADQGYAAAQY 145
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 74 ASFTLPQLRAASL-VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALD 126
A +TL + A L V +S +A++ ++A G ++ G GV ++ +A+
Sbjct: 107 AQYTLGYMYADGLGVPESGTEAVKWFKKAADQGYAAAQYNLGNMYRTGEGVPESAAEAVK 166
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ---------- 172
+ K A +G A + GLMY + D A+ YR+AA GD AQ
Sbjct: 167 WYRKAAGQGDVRAQYNLGLMYADGDGVPENGAEAVKWYRKAAEQGDADAQYNLGYMYADG 226
Query: 173 ---PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P N EAVK +A+ G AQ +L G+GV N A W+ A G
Sbjct: 227 LGVPENDAEAVKWFRKAAAQGRADAQSKLGFMYGTGKGVPENSIRAYVWFSMAKTQGDTG 286
Query: 230 AMYNTSLCYS 239
A N + S
Sbjct: 287 AATNIDILKS 296
>gi|148826779|ref|YP_001291532.1| Sel1 domain-containing protein [Haemophilus influenzae PittGG]
gi|148718021|gb|ABQ99148.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae PittGG]
Length = 398
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 113/247 (45%), Gaps = 28/247 (11%)
Query: 95 LRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---- 147
L+PL E A+ G ++ GRGV+++ +A+ + K A +G A + G+MY
Sbjct: 51 LQPLAEQGDAIAQFLLGGMYEEGRGVKQDDFEAVKWYRKAAEQGYADAQFNLGVMYERGR 110
Query: 148 -WEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVR 193
D EA + YR+AA G+ + Q + EAVK +A+ GH +
Sbjct: 111 GVRQDVFEA-VKWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAK 169
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQY L GRGV + EA +WY +AAE GY A +N Y G G+ +A K
Sbjct: 170 AQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVK 229
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQ 308
W ++AA+ GH KAQ G ++ G + + V + A GE A V+ +
Sbjct: 230 WYRKAAEQGHAKAQYNLG-NMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAK 288
Query: 309 LSATSRD 315
+D
Sbjct: 289 GRGVKQD 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEA 155
A V G + G+GV+++ +A+ + K A +G A + G MY + D EA
Sbjct: 132 ASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDGFEA 191
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+ YR+AA G AQ + EAVK +A+ GH +AQY L
Sbjct: 192 -VKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHAKAQYNLGNMY 250
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV + E +WY +AAE G +A +N + Y+ G G+ + +A KW ++AA+ G
Sbjct: 251 ANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQG 310
Query: 263 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 298
+ AQL G GL + + ++AV + A G+ A
Sbjct: 311 YADAQLNLGNMYAKGLGVKQDDVEAVKWYRKAAEQGDADA 350
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +GRGV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 175 GNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEA-VKWYRK 233
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ AN E VK +A+ G +AQ+ L + +GRGV
Sbjct: 234 AAEQGHAKAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVK 293
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ EA +WY +AAE GY A N Y+ G G+ +A KW ++AA+ G AQ
Sbjct: 294 QDYFEAVKWYRKAAEQGYADAQLNLGNMYAKGLGVKQDDVEAVKWYRKAAEQGDADAQ 351
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY + D E + YR+
Sbjct: 211 GNMYYNGHGVKQDDVEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFET-VKWYRK 269
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ + EAVK +A+ G+ AQ L +G GV
Sbjct: 270 AAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQGYADAQLNLGNMYAKGLGVK 329
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +AAE G A Y G+G+ + A++W+ +A D GH +A E
Sbjct: 330 QDDVEAVKWYRKAAEQGDADAQALLGFAYLLGKGVQFNKSLAKEWLGKACDNGH-QAGCE 388
Query: 270 HGLGLFTEGEM 280
+ G GE+
Sbjct: 389 Y-YGKLNRGEL 398
>gi|392545490|ref|ZP_10292627.1| Sel1 domain-containing protein [Pseudoalteromonas rubra ATCC 29570]
Length = 555
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVL 166
+ G V +N ++A+ F K A +G A G MY + EAA+ LY+QAA
Sbjct: 34 YYFGETVEQNYERAVYWFGKAAEQGEAHAQYSLGYMYRMGQYFEQSDEAAVKLYQQAAEQ 93
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G +AQ + +AVKL +A+ G+ AQY+L RG G+ N
Sbjct: 94 GHASAQYNLGVLCVRGEGITQSDTKAVKLYRKAAQQGNALAQYELGFMYARGNGIKKNDT 153
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
EA +WY A++ G RA+ N Y FG G+ S ++A K+ + AA G+ +AQL
Sbjct: 154 EAVKWYRLASDQGNTRALCNLGYMYDFGRGVKQSSKEANKYYRLAAKKGNNRAQLNLAFS 213
Query: 274 LFTEGEMMK 282
F +G+ +K
Sbjct: 214 YF-QGDGVK 221
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
++ L + + +G AQ LA + G V+ N + A W+ +AAE G A Y+ Y
Sbjct: 12 IEALIEQAQSGDAVAQNTLADAYYFGETVEQNYERAVYWFGKAAEQGEAHAQYSLGYMYR 71
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
G+ S A K ++AA+ GH AQ G+
Sbjct: 72 MGQYFEQSDEAAVKLYQQAAEQGHASAQYNLGV 104
>gi|237746262|ref|ZP_04576742.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377613|gb|EEO27704.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 377
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 23/199 (11%)
Query: 91 WNDALRPLREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
+N+AL +++ V G+ + G G+++NL++A+ + K A +G A +
Sbjct: 40 YNEALPLIKKGAVSGDAEAQFNLGRMYSKGHGIKQNLEQAMYWYKKSADQGHLKATYNLA 99
Query: 145 LMYWE----MDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQAS 187
MY + + E A LY ++A G PAAQ + ++A + Y+A+
Sbjct: 100 YMYLQGKGVKENPEKAYKLYLESAEKGLPAAQFNLALMYFKGKGVKKDNQKAFEWFYKAA 159
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
+ G AQ+ +AL G G+ +A WY +AAE GY +AM+ L Y GEG+P +
Sbjct: 160 LQGDKEAQFNVALSYTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGEGVPAN 219
Query: 248 HRQARKWMKRAADCGHGKA 266
+A +W K+AA G+ A
Sbjct: 220 RDEAIRWYKKAAAQGYAPA 238
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G+GV++N +KA +L+ A +G A + LMY++ + A + +AA+
Sbjct: 102 YLQGKGVKENPEKAYKLYLESAEKGLPAAQFNLALMYFKGKGVKKDNQKAFEWFYKAALQ 161
Query: 167 GDPAAQPANA----------EEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ A + K LY +A+ G+ +A + L L +G GV N
Sbjct: 162 GDKEAQFNVALSYTEGNGIKQGYAKALYWYKKAAEQGYAKAMFALGLVYRQGEGVPANRD 221
Query: 214 EAARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EA RWY +AA GY AM N SL Y G S +A KW A D G K GL
Sbjct: 222 EAIRWYKKAAAQGYAPAMANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRK-NAPLGL 280
Query: 273 GL 274
GL
Sbjct: 281 GL 282
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G+ + EA+ L+ + +++G AQ+ L +G G+ NL++A WY ++A+ G
Sbjct: 31 GNQLYEQGKYNEALPLIKKGAVSGDAEAQFNLGRMYSKGHGIKQNLEQAMYWYKKSADQG 90
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++A YN + Y G+G+ + +A K +A+ G AQ L F
Sbjct: 91 HLKATYNLAYMYLQGKGVKENPEKAYKLYLESAEKGLPAAQFNLALMYF 139
>gi|189219667|ref|YP_001940308.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
gi|189186525|gb|ACD83710.1| TPR repeat protein, SEL1 subfamily [Methylacidiphilum infernorum
V4]
Length = 526
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GV +N +A+ + K A +G +A + GL+Y DK A+ +
Sbjct: 305 GTAYLDGKGVPQNYVQAIYWYQKAAKQGDIVAQFNLGLLY---DKGRGVSQDYAQAVYWW 361
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
RQAA GD +Q P + +AV +A+ G+ AQ L + ++G G
Sbjct: 362 RQAAEKGDAGSQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQSNLGVAYYKGLG 421
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +A W+ +AAE GY A N Y +G+G+P H QA W ++AA+ G+ AQ
Sbjct: 422 VRQDYIQAVYWFKKAAEQGYPIAQLNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMAQ 481
Query: 268 LEHGLGLF 275
GL F
Sbjct: 482 FNLGLAYF 489
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 26/233 (11%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPA 170
GV K+ DKA+ F K A +G +L+ G Y D +AA + YR+AA GDP
Sbjct: 133 GVPKDFDKAVYWFRKAAEQGHSLSQFVMGRAYTVGVGVPKDLSQAA-NWYRKAAEQGDPR 191
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ P + +AV +A+ + +AQ+ L + ++G GV + +A
Sbjct: 192 AQLNLGYAYDYGQGVPQDYVQAVYWYQKAAEQDNAKAQFCLGVAYYKGLGVHQDSIQAVY 251
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
W+ +AAE G V A + L Y G G+P + QA W ++AA+ G+ +AQ E G + +
Sbjct: 252 WFRKAAEQGLVEAQFELGLAYYEGRGVPQDYIQAVYWYEKAAEQGNAQAQCELGTA-YLD 310
Query: 278 GE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
G+ ++A+ + + A + G+ A ++ + S+D A V WR
Sbjct: 311 GKGVPQNYVQAIYWYQKAAKQGDIVAQFNLGLLYDKGRGVSQDYAQAVY-WWR 362
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-MYWEMDKKEAAISLYRQAAVL 166
G + G+GV K+L +A+ + K A +G+ A G YW +
Sbjct: 88 GDAYSRGQGVTKDLAQAVYWYRKAAEQGNVQAQYKLGFAYYWGV---------------- 131
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
P + ++AV +A+ GH +Q+ + G GV +L +AA WY +AAE G
Sbjct: 132 ---GGVPKDFDKAVYWFRKAAEQGHSLSQFVMGRAYTVGVGVPKDLSQAANWYRKAAEQG 188
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMK 282
RA N Y +G+G+P + QA W ++AA+ + KAQ G+ GL + ++
Sbjct: 189 DPRAQLNLGYAYDYGQGVPQDYVQAVYWYQKAAEQDNAKAQFCLGVAYYKGLGVHQDSIQ 248
Query: 283 AVVYLELATRAG 294
AV + A G
Sbjct: 249 AVYWFRKAAEQG 260
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G + +G+GV ++ +A+ + K A + + A G+ Y++ A+ +
Sbjct: 194 LNLGYAYDYGQGVPQDYVQAVYWYQKAAEQDNAKAQFCLGVAYYKGLGVHQDSIQAVYWF 253
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G AQ P + +AV +A+ G+ +AQ +L G+G
Sbjct: 254 RKAAEQGLVEAQFELGLAYYEGRGVPQDYIQAVYWYEKAAEQGNAQAQCELGTAYLDGKG 313
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N +A WY +AA+ G + A +N L Y G G+ + QA W ++AA+ G +Q
Sbjct: 314 VPQNYVQAIYWYQKAAKQGDIVAQFNLGLLYDKGRGVSQDYAQAVYWWRQAAEKGDAGSQ 373
Query: 268 LEHGLGL-FTEG---EMMKAVVYLELATRAGETAA 298
L G + +G + +AV + + A G A
Sbjct: 374 LNLGYAYDYGQGVPQDHAQAVYWYQKAAEQGNAMA 408
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
++ L Q + G+ +AQ L RG+GV +L +A WY +AAE G V+A Y Y
Sbjct: 68 SITQLEQRARGGNAQAQLDLGDAYSRGQGVTKDLAQAVYWYRKAAEQGNVQAQYKLGFAY 127
Query: 239 SFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+G G+P +A W ++AA+ GH +Q G
Sbjct: 128 YWGVGGVPKDFDKAVYWFRKAAEQGHSLSQFVMG 161
>gi|222086265|ref|YP_002544797.1| hypothetical protein Arad_2749 [Agrobacterium radiobacter K84]
gi|221723713|gb|ACM26869.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 393
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 93 DALRPLR---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
D RPL +A L+ G+ +K G G+ K+L +AL + K A +G+ A D G MY
Sbjct: 39 DYWRPLANKGDAAAQLKLGEMYKLGDGIEKDLKQALKWYRKAAEQGNAKAEFDLGAMY-- 96
Query: 150 MDKKEA-------AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIA 189
DK E AI YR+AA G AQ P + A +A+
Sbjct: 97 -DKGEGIAKDHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVPKDRTLAFVWYSKAAEQ 155
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ + + G GVD + +A WY +AA+ G V A YN ++ Y GEG+
Sbjct: 156 GNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMYDSGEGITKDSG 215
Query: 250 QARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADH 300
QA W ++AAD G +AQ G G+ +G +AV + A G+ A +
Sbjct: 216 QALSWYRKAADQGKIEAQYNLAVMYRDGAGVPKDG--ARAVTWFRKAADQGDADAQY 270
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKL 182
S LA D G ++ +AA+ +R A GD AAQ + ++A+K
Sbjct: 17 SGLAHADTGQNAYDRGDHKAALDYWRPLANKGDAAAQLKLGEMYKLGDGIEKDLKQALKW 76
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A+ G+ +A++ L +G G+ + +A WY +AA+ GY A YN + Y GE
Sbjct: 77 YRKAAEQGNAKAEFDLGAMYDKGEGIAKDHAQAILWYRKAADQGYADAQYNLGVIYDEGE 136
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA 297
G+P A W +AA+ G+ AQ G+ ++ G+ + +A+ + A G
Sbjct: 137 GVPKDRTLAFVWYSKAAEQGNAAAQFNVGV-MYDNGDGVDQDKSQAIAWYRKAADQGNVD 195
Query: 298 ADHVKNVILQQLSATSRDRAMLVVDSW 324
A + ++ ++D + SW
Sbjct: 196 AQYNLAIMYDSGEGITKDSGQAL--SW 220
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G GV ++ +A+ + K A +G+ A + +MY D E A+S Y
Sbjct: 165 GVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMY---DSGEGITKDSGQALSWY 221
Query: 161 RQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G D A P + AV +A+ G AQY L G G
Sbjct: 222 RKAADQGKIEAQYNLAVMYRDGAGVPKDGARAVTWFRKAADQGDADAQYNLGTMYADGDG 281
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + EA W+ +AA+ G V A YN + Y GEG+ + +A W ++AA + A
Sbjct: 282 IAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAKNGPEAVGWFEKAAAENYADAA 341
Query: 268 LEHGLGLFTEGEMMKA 283
L G+ ++ +G+ + A
Sbjct: 342 LNLGV-MYRDGDGVPA 356
>gi|398380210|ref|ZP_10538328.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397721526|gb|EJK82074.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 393
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 93 DALRPLR---EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
D RPL +A L+ G+ +K G G+ K+L +AL + K A +G+ A D G MY
Sbjct: 39 DYWRPLANKGDATAQLKLGEMYKLGDGIEKDLKQALKWYRKAADQGNAKAEFDLGAMY-- 96
Query: 150 MDKKEA-------AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIA 189
DK E AI YR+AA G AQ P + A +A+
Sbjct: 97 -DKGEGMAKNHAQAILWYRKAADQGYADAQYNLGVIYDEGEGVPKDRTLAFVWYSKAAEQ 155
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ + + G GVD + +A WY +AA+ G V A YN ++ Y GEG+
Sbjct: 156 GNAAAQFNVGVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMYDSGEGITKDSG 215
Query: 250 QARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADH 300
QA W ++AAD G +AQ G G+ +G +AV + A G+ A +
Sbjct: 216 QALAWYRKAADQGKIEAQYNLAVMYRDGAGVPKDG--AQAVTWFRKAADQGDADAQY 270
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKL 182
S LA D G ++ +AA+ +R A GD AQ + ++A+K
Sbjct: 17 SGLAHADTGQNAYDQGDHKAALDYWRPLANKGDATAQLKLGEMYKLGDGIEKDLKQALKW 76
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A+ G+ +A++ L +G G+ N +A WY +AA+ GY A YN + Y GE
Sbjct: 77 YRKAADQGNAKAEFDLGAMYDKGEGMAKNHAQAILWYRKAADQGYADAQYNLGVIYDEGE 136
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA 297
G+P A W +AA+ G+ AQ G+ ++ G+ + +A+ + A G
Sbjct: 137 GVPKDRTLAFVWYSKAAEQGNAAAQFNVGV-MYDNGDGVDQDKSQAIAWYRKAADQGNVD 195
Query: 298 ADHVKNVILQQLSATSRD 315
A + ++ ++D
Sbjct: 196 AQYNLAIMYDSGEGITKD 213
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 24/196 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G GV ++ +A+ + K A +G+ A + +MY D E A++ Y
Sbjct: 165 GVMYDNGDGVDQDKSQAIAWYRKAADQGNVDAQYNLAIMY---DSGEGITKDSGQALAWY 221
Query: 161 RQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G D A P + +AV +A+ G AQY L G G
Sbjct: 222 RKAADQGKIEAQYNLAVMYRDGAGVPKDGAQAVTWFRKAADQGDADAQYNLGTMYADGDG 281
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + EA W+ +AA+ G V A YN + Y GEG+ + +A W ++AA + A
Sbjct: 282 IAEDDVEAIAWFRKAADQGDVEAEYNLGVMYRDGEGVAKNGPEAVGWFEKAAAENYADAA 341
Query: 268 LEHGLGLFTEGEMMKA 283
L G+ ++ +G+ + A
Sbjct: 342 LNLGV-MYRDGDGVPA 356
>gi|197283922|ref|YP_002149794.1| hypothetical protein PMI0007 [Proteus mirabilis HI4320]
gi|227358210|ref|ZP_03842551.1| Sel1 domain protein [Proteus mirabilis ATCC 29906]
gi|425069375|ref|ZP_18472490.1| hypothetical protein HMPREF1311_02560 [Proteus mirabilis WGLW6]
gi|425073747|ref|ZP_18476853.1| hypothetical protein HMPREF1310_03204 [Proteus mirabilis WGLW4]
gi|194681409|emb|CAR40247.1| putative exported protein [Proteus mirabilis HI4320]
gi|227161546|gb|EEI46583.1| Sel1 domain protein [Proteus mirabilis ATCC 29906]
gi|404595018|gb|EKA95573.1| hypothetical protein HMPREF1310_03204 [Proteus mirabilis WGLW4]
gi|404597314|gb|EKA97813.1| hypothetical protein HMPREF1311_02560 [Proteus mirabilis WGLW6]
Length = 327
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++ G GV +N KAL+ + K A +G A ++ LMY D E
Sbjct: 48 GVKYEGGEGVEQNTQKALEWYTKAAEQGHAEAQLNLALMYDMNDDIER------------ 95
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+AE+AV +A++ G AQY LA+ G GV+ + ++A WY +A E G
Sbjct: 96 -------DAEKAVYWYNKAAVQGLSLAQYNLAVSFDEGDGVEQDHEKAVYWYTKAGEQGD 148
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 282
A YN ++ Y G G+ H +A W +AA+ GH AQ + + EGE + K
Sbjct: 149 SDAQYNLAISYDEGIGIEQDHEKAVTWYTKAAEQGHADAQYNLAVS-YDEGEGVERDGSK 207
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
AV + A G A + V+ + ++D+
Sbjct: 208 AVFWYTKAANQGNRDAQNNLGVMYDEGDGVAKDQ 241
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ +QYQL + G GV+ N Q+A WY +AAE G+ A N +L Y + +
Sbjct: 39 GNAASQYQLGVKYEGGEGVEQNTQKALEWYTKAAEQGHAEAQLNLALMYDMNDDIERDAE 98
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 295
+A W +AA G AQ + F EG+ + KAV + T+AGE
Sbjct: 99 KAVYWYNKAAVQGLSLAQYNLAVS-FDEGDGVEQDHEKAVYWY---TKAGE 145
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
++AE G + Y + Y GEG+ + ++A +W +AA+ GH +AQL
Sbjct: 34 KSAEEGNAASQYQLGVKYEGGEGVEQNTQKALEWYTKAAEQGHAEAQL 81
>gi|386266002|ref|YP_005829494.1| Putative TPR repeat protein [Haemophilus influenzae R2846]
gi|309973238|gb|ADO96439.1| Putative TPR repeat protein [Haemophilus influenzae R2846]
Length = 348
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 24/275 (8%)
Query: 18 LQFPITEKDNRRPELTAS--ARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAAS 75
L P+ E+ N + +K + ++ F + + A ++ N A
Sbjct: 36 LWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWYRKAAEQGVADAQLNLGNMYAKG 95
Query: 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
+ Q ++ W A G + +GRGV+++ +A+ F K A +G
Sbjct: 96 LGVKQDDVEAV---KWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQG 152
Query: 136 STLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAE 177
A + G MY+ + D EA + YR+AA G AQ +
Sbjct: 153 YADAQFNLGNMYYNGHGVKQDDFEA-VKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDF 211
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK +A+ GH +AQY L GRGV + EA +WY +AAE GY A N
Sbjct: 212 EAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSA 271
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
YS G G+ + +A KW K+AA+ G Q + GL
Sbjct: 272 YSAGHGVRQDYIEAVKWFKKAAENGSADGQFKLGL 306
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
PL E A + G +K G+G++++ +A+ + K A +G A ++ G MY
Sbjct: 39 PLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWYRKAAEQGVADAQLNLGNMY------ 92
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A LG + EAVK QA+ G+ +AQ+ L L GRGV +
Sbjct: 93 ---------AKGLG----VKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYF 139
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
EA +W+ +AAE GY A +N Y G G+ +A KW ++AA+ G+ AQ G
Sbjct: 140 EAVKWFRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLG-N 198
Query: 274 LFTEGEMMK 282
++ G +K
Sbjct: 199 MYYNGHGVK 207
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 161 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 219
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ AN EAVK +A+ G+ AQ L G GV
Sbjct: 220 AAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVR 279
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ EA +W+ +AAE G + L Y G+G+ A++W+ +A D G+
Sbjct: 280 QDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGN 333
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + + + A KL + G+ Q+ L L +G+G+ + EA +WY +AAE G
Sbjct: 21 GLEATKRGDYQTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWYRKAAEQG 80
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A N Y+ G G+ +A KW ++AA+ G+ KAQ GL ++ G +K
Sbjct: 81 VADAQLNLGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGL-MYDNGRGVK 135
>gi|333368363|ref|ZP_08460569.1| hypothetical protein HMPREF9373_0974 [Psychrobacter sp. 1501(2011)]
gi|332977421|gb|EGK14198.1| hypothetical protein HMPREF9373_0974 [Psychrobacter sp. 1501(2011)]
Length = 423
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 17/178 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ GRGV ++ +KAL +LK A++ A V+ G++Y++ E A+ + +AA
Sbjct: 203 YDEGRGVPQDYNKALKWYLKAASQDYVDAYVNLGVLYYQGHGVEVDYAKAVQWFLKAAQE 262
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
+ Q + E A +A++ G +AQY L + G GV+++ +
Sbjct: 263 DNAIGQLNLGIMYENGLGVEQDFEMAASWYKKAAVKGDGQAQYSLGMLYDSGYGVEYDPR 322
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+A WY +AA+ G A YN ++ Y GEG+P ++A KW +AAD +GKA G
Sbjct: 323 QAVAWYQKAADQGMAEAQYNLAMSYYLGEGVPKDFKKAIKWYTQAADQDYGKASYNLG 380
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGV KN+ KA+ + K A +G A + G++Y D +EA + Y +
Sbjct: 92 GVMYHEGRGVAKNITKAMQWYKKAADQGDKDAQYNLGILYENGIGIAQDYQEA-LKWYLK 150
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ + +A+K A+ G+V AQY +A GRGV
Sbjct: 151 AAQQGDLHAQYKIGWFYESGHGVDPDMSKAIKWYLPAADKGNVDAQYTMATLYDEGRGVP 210
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL- 268
+ +A +WYL+AA YV A N + Y G G+ + + +A +W +AA + QL
Sbjct: 211 QDYNKALKWYLKAASQDYVDAYVNLGVLYYQGHGVEVDYAKAVQWFLKAAQEDNAIGQLN 270
Query: 269 -----EHGLGLFTEGEM 280
E+GLG+ + EM
Sbjct: 271 LGIMYENGLGVEQDFEM 287
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV + KA+ FLK A + + ++ G+MY E D E A S Y++
Sbjct: 236 GVLYYQGHGVEVDYAKAVQWFLKAAQEDNAIGQLNLGIMYENGLGVEQDF-EMAASWYKK 294
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AAV GD AQ + + +AV +A+ G AQY LA+ + G GV
Sbjct: 295 AAVKGDGQAQYSLGMLYDSGYGVEYDPRQAVAWYQKAADQGMAEAQYNLAMSYYLGEGVP 354
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ ++A +WY +AA+ Y +A YN Y G+G+ S +A+KW +RA
Sbjct: 355 KDFKKAIKWYTQAADQDYGKASYNLGTMYYNGDGVTQSCSEAKKWFERA 403
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
++A + +A++ G+ AQ+ L + H GRGV N+ +A +WY +AA+ G A YN +
Sbjct: 70 KKAFQWYQKAAVNGNADAQFNLGVMYHEGRGVAKNITKAMQWYKKAADQGDKDAQYNLGI 129
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLELA 290
Y G G+ +++A KW +AA G AQ + +G F E +M KA+ + A
Sbjct: 130 LYENGIGIAQDYQEALKWYLKAAQQGDLHAQ--YKIGWFYESGHGVDPDMSKAIKWYLPA 187
Query: 291 TRAGETAADHVKNVILQQLSATSRD 315
G A + + + +D
Sbjct: 188 ADKGNVDAQYTMATLYDEGRGVPQD 212
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G +++G G+ ++ +AL +LK A +G A G Y +M K AI Y
Sbjct: 128 GILYENGIGIAQDYQEALKWYLKAAQQGDLHAQYKIGWFYESGHGVDPDMSK---AIKWY 184
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
AA G+ AQ P + +A+K +A+ +V A L + ++G G
Sbjct: 185 LPAADKGNVDAQYTMATLYDEGRGVPQDYNKALKWYLKAASQDYVDAYVNLGVLYYQGHG 244
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V+ + +A +W+L+AA+ N + Y G G+ A W K+AA G G+AQ
Sbjct: 245 VEVDYAKAVQWFLKAAQEDNAIGQLNLGIMYENGLGVEQDFEMAASWYKKAAVKGDGQAQ 304
Query: 268 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
G+ G E + +AV + + A G A +
Sbjct: 305 YSLGMLYDSGYGVEYDPRQAVAWYQKAADQGMAEAQY 341
>gi|359298722|ref|ZP_09184561.1| Sel1 domain-containing protein [Haemophilus [parainfluenzae] CCUG
13788]
gi|402306033|ref|ZP_10825085.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
gi|400375448|gb|EJP28347.1| Sel1 repeat protein [Haemophilus sputorum HK 2154]
Length = 321
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEM 150
+PL E A G + H +GV ++ +A + K A +G A G+MY E
Sbjct: 52 KPLAEQGYASAQFNLGVIYDHEQGVEQDYIEAAKWYRKAAEQGHRDAQFYLGVMYSRGEG 111
Query: 151 DKKE--AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
K++ I YR+AA G AQ + EAVK +A+ GH AQ
Sbjct: 112 VKQDYLEEIKWYRKAAEQGHIDAQFNLGVMYSKGEGVKQDDIEAVKWYRKAAEQGHKNAQ 171
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L + + GRGV + EAA+WY +AA+ G++ A++N + Y G G+ + + KW
Sbjct: 172 YNLGVMYYDGRGVKQDYLEAAKWYRKAADQGHINALFNLGVIYYDGRGVKQDYLETAKWY 231
Query: 256 KRAADCGHGKAQLEHGLGLFTEGEMMK 282
++AA+ GH AQ G+ ++++GE +K
Sbjct: 232 RKAAEQGHRDAQFNLGV-MYSKGEGVK 257
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA--- 155
R+A L G + G GV+++ + + + K A +G A + G+MY K E
Sbjct: 96 RDAQFYL--GVMYSRGEGVKQDYLEEIKWYRKAAEQGHIDAQFNLGVMY---SKGEGVKQ 150
Query: 156 ----AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQL 198
A+ YR+AA G AQ + EA K +A+ GH+ A + L
Sbjct: 151 DDIEAVKWYRKAAEQGHKNAQYNLGVMYYDGRGVKQDYLEAAKWYRKAADQGHINALFNL 210
Query: 199 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ + GRGV + E A+WY +AAE G+ A +N + YS GEG+ + +A KW ++A
Sbjct: 211 GVIYYDGRGVKQDYLETAKWYRKAAEQGHRDAQFNLGVMYSKGEGVKQDYFEAAKWYRKA 270
Query: 259 ADCGHGKAQLEHGL 272
A+ G+ AQ G+
Sbjct: 271 AEQGYASAQYNLGV 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV+++ +A+ + K A +G A + G+MY++ D EAA YR+
Sbjct: 139 GVMYSKGEGVKQDDIEAVKWYRKAAEQGHKNAQYNLGVMYYDGRGVKQDYLEAA-KWYRK 197
Query: 163 AAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G D + E K +A+ GH AQ+ L + +G GV
Sbjct: 198 AADQGHINALFNLGVIYYDGRGVKQDYLETAKWYRKAAEQGHRDAQFNLGVMYSKGEGVK 257
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ EAA+WY +AAE GY A YN + Y+ G G+P A++W+ +A
Sbjct: 258 QDYFEAAKWYRKAAEQGYASAQYNLGVMYANGYGVPQDKNLAKEWILKA 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G AA+ N + A + + G+ AQ+ L + +GV+ + EAA+WY +AAE G
Sbjct: 35 GLAAAEKGNHQTAFQFWKPLAEQGYASAQFNLGVIYDHEQGVEQDYIEAAKWYRKAAEQG 94
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+ A + + YS GEG+ + + KW ++AA+ GH AQ G+ ++++GE +K
Sbjct: 95 HRDAQFYLGVMYSRGEGVKQDYLEEIKWYRKAAEQGHIDAQFNLGV-MYSKGEGVK 149
>gi|429750134|ref|ZP_19283195.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165816|gb|EKY07845.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 262
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G G+ ++L+KA++ F K A +G + V GL Y E K+AA + +
Sbjct: 78 GVCYHKGEGIEESLEKAVEWFEKSAKQGDSEGQVLLGLSYCMGTGVEQSFKKAA-EWFEK 136
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD Q A + E+A + +A+ G+ AQY LA C H G GV+
Sbjct: 137 AAKQGDAEGQCALGECYSNGEGVEQSFEKAAEWFEKAAEQGYAGAQYSLAYCYHNGEGVE 196
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ +AA W +++A+ GY +A Y LCY GEG+ +S +A W ++ D
Sbjct: 197 QSDSKAAEWLMKSAQQGYAKAQYFLGLCYDKGEGVEISKEKALYWFIKSCD 247
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y A D + E+AVK +A+ G+ +AQ L +C H+G G++ +L++A W+
Sbjct: 39 YNLAKCYYDGEEVEQSFEKAVKWYEKAAKQGYAKAQNALGVCYHKGEGIEESLEKAVEWF 98
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++A+ G L Y G G+ S ++A +W ++AA G + Q G ++ GE
Sbjct: 99 EKSAKQGDSEGQVLLGLSYCMGTGVEQSFKKAAEWFEKAAKQGDAEGQCALGE-CYSNGE 157
Query: 280 -----MMKAVVYLELATRAGETAADH 300
KA + E A G A +
Sbjct: 158 GVEQSFEKAAEWFEKAAEQGYAGAQY 183
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
E VLL G + G GV ++ KA + F K A +G G Y + E
Sbjct: 108 EGQVLL--GLSYCMGTGVEQSFKKAAEWFEKAAKQGDAEGQCALGECYSNGEGVEQSFEK 165
Query: 156 AISLYRQAAVLGDPAAQPA------NAE-------EAVKLLYQASIAGHVRAQYQLALCL 202
A + +AA G AQ + N E +A + L +++ G+ +AQY L LC
Sbjct: 166 AAEWFEKAAEQGYAGAQYSLAYCYHNGEGVEQSDSKAAEWLMKSAQQGYAKAQYFLGLCY 225
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGY 227
+G GV+ + ++A W++++ + Y
Sbjct: 226 DKGEGVEISKEKALYWFIKSCDNSY 250
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEG 278
AE G A YN + CY GE + S +A KW ++AA G+ KAQ G+ G E
Sbjct: 30 AEKGDAEAQYNLAKCYYDGEEVEQSFEKAVKWYEKAAKQGYAKAQNALGVCYHKGEGIEE 89
Query: 279 EMMKAVVYLELATRAGET 296
+ KAV + E + + G++
Sbjct: 90 SLEKAVEWFEKSAKQGDS 107
>gi|46446345|ref|YP_007710.1| hypothetical protein pc0711 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399986|emb|CAF23435.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 412
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR 161
+ G + G GV ++ + F A +G +A G MY E K+ A ++
Sbjct: 115 KLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQEAFKYFK 174
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD AQ + +EA K A+ GH AQY+L + GR V
Sbjct: 175 FAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCV 234
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ QEA ++Y AA+ G+V A Y+ L Y++G G+ S ++A K+ K AAD GH KAQ
Sbjct: 235 TNSEQEAFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQY 294
Query: 269 EHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVI 305
+ G + G +K A+ Y +LA G A + +I
Sbjct: 295 QLG-DTYKNGRGVKRSKQEAIKYYKLAADQGYADAQYYLGII 335
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 30/251 (11%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +S +A + + +A + G + G GV ++ +A F A +G A
Sbjct: 162 VTQSKQEAFKYFKFAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQ 221
Query: 141 VDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLL 183
G++Y + ++ A Y+ AA G AQ + + +EA K
Sbjct: 222 YKLGIIYGYGRCVTNSEQEAFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYF 281
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
A+ GH +AQYQL GRGV + QEA ++Y AA+ GY A Y + Y
Sbjct: 282 KLAADQGHAKAQYQLGDTYKNGRGVKRSKQEAIKYYKLAADQGYADAQYYLGIIYDKKRD 341
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGET-A 297
S ++A K+ K AAD GH AQ G+ ++ +G + A+ Y +LA + G+T A
Sbjct: 342 AIQSKQEAFKYFKLAADQGHADAQYFVGM-MYQKGRGVSPSEEGAIKYYKLAAKQGDTMA 400
Query: 298 ADHVKNVILQQ 308
A + ++I +Q
Sbjct: 401 ASKINSIISRQ 411
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQY+L L G GV + QE +++ AA+ G+V A Y+ Y G G+ S +
Sbjct: 108 GDTKAQYKLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQ 167
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNV 304
+A K+ K AAD G AQ + G ++ EG + +A Y +LA G A + +
Sbjct: 168 EAFKYFKFAADQGDATAQYKLG-AMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGI 226
Query: 305 I 305
I
Sbjct: 227 I 227
>gi|297621489|ref|YP_003709626.1| hypothetical protein wcw_1268 [Waddlia chondrophila WSU 86-1044]
gi|297376790|gb|ADI38620.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337293689|emb|CCB91676.1| uncharacterized protein ybeQ [Waddlia chondrophila 2032/99]
Length = 625
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + HG G+ KN KA + F + A +LA + GLMY W ++K +A Y ++
Sbjct: 82 GNMYLHGIGLEKNDTKAFEHFSQAAKEKDSLAEYNLGLMYENGWGVEKNLSSAFEYYERS 141
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+P Q P N ++A + +A+ G V AQ L G+GVD
Sbjct: 142 ANAGNPYGQINLGRFYENGISVPNNDQKAFQWYKKAADQGMVSAQNSLGRMYQLGKGVDQ 201
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WYL+AAE G A +N L Y G+G+ +A+KW ++AA+ + AQ
Sbjct: 202 DYGKAKEWYLKAAEEGNAFAQFNLGLLYEEGKGVQKDDLEAKKWYEKAAEQENPLAQFRL 261
Query: 271 G 271
G
Sbjct: 262 G 262
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 54/224 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------------------- 147
G+ ++ G+GV ++ KA + +LK A G+ A + GL+Y
Sbjct: 190 GRMYQLGKGVDQDYGKAKEWYLKAAEEGNAFAQFNLGLLYEEGKGVQKDDLEAKKWYEKA 249
Query: 148 -------------WEMDKKE-------AAISLYRQAAVLGDPAAQ-------------PA 174
W +K E AA Y +AA G AQ
Sbjct: 250 AEQENPLAQFRLGWLNEKPEGFSPNDSAAYEWYLKAARQGVLQAQNNVGRMLKKGLGVEE 309
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EA K A+ G+ AQ L + G GV + + A WY +AAE R +YN
Sbjct: 310 NDLEAAKWFRAAAEKGNSAAQNNLGVLYEEGEGVPKDFKLALFWYSQAAENNDSRGLYNL 369
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
Y FG+G+P +A + +RAA+ G+ AQL GL L+ +G
Sbjct: 370 GRVYEFGKGVPKDPSKAYTYYRRAAELGYAPAQLNLGL-LYIKG 412
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQA 163
G+ K G GV +N +A F A +G++ A + G++Y E + K+ ++L Y QA
Sbjct: 298 GRMLKKGLGVEENDLEAAKWFRAAAEKGNSAAQNNLGVLYEEGEGVPKDFKLALFWYSQA 357
Query: 164 AVLGDP-------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A D P + +A +A+ G+ AQ L L +G GV
Sbjct: 358 AENNDSRGLYNLGRVYEFGKGVPKDPSKAYTYYRRAAELGYAPAQLNLGLLYIKGVGVSQ 417
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK----- 265
+ + AA W+ +AAE G A N L YS G+G+ S +A W K+AA+ + +
Sbjct: 418 SFKSAADWFQKAAEKGNSSAQVNLGLLYSQGKGVLQSDDEAVYWYKKAAEKDNPEAFYLM 477
Query: 266 -AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
A E G GL E ++ KA+ Y + A G A +
Sbjct: 478 AAMYESGKGL--EKDLKKAIEYYQKAAEGGSGIAQN 511
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G + G GV ++ A D F K A +G++ A V+ GL+Y + + + A+ Y
Sbjct: 403 LNLGLLYIKGVGVSQSFKSAADWFQKAAEKGNSSAQVNLGLLYSQGKGVLQSDDEAVYWY 462
Query: 161 RQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++AA +P A + ++A++ +A+ G AQ +L L G G
Sbjct: 463 KKAAEKDNPEAFYLMAAMYESGKGLEKDLKKAIEYYQKAAEGGSGIAQNKLGLLYEIGSG 522
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA- 266
+ N+ EA WY ++AE G+ N Y G G+ ++ A W ++AA G +
Sbjct: 523 LPQNIGEAVNWYRKSAESGFADGQNNLGRMYEQGIGMKVNFEAAAFWYRQAAGLGSAEGM 582
Query: 267 -----QLEHGLGLFTEGEMMKAV-VYLELATRAGETA 297
E GLG+ ++ +AV +Y + A + E A
Sbjct: 583 YNLGRMYEDGLGVGK--DIREAVNLYRQAAEKGNEDA 617
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 27/243 (11%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ EG+ FA +L + L A K W + + R G +
Sbjct: 214 AEEGNAFAQFNLGLLYEEGKGVQKDDLEA-----KKWYEKAAEQENPLAQFRLGWLNEKP 268
Query: 115 RGVRKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
G N A + +LK A +G A M+ GL E D + A +R AA G+
Sbjct: 269 EGFSPNDSAAYEWYLKAARQGVLQAQNNVGRMLKKGLGVEENDLE--AAKWFRAAAEKGN 326
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AAQ P + + A+ QA+ R Y L G+GV + +A
Sbjct: 327 SAAQNNLGVLYEEGEGVPKDFKLALFWYSQAAENNDSRGLYNLGRVYEFGKGVPKDPSKA 386
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+Y RAAE GY A N L Y G G+ S + A W ++AA+ G+ AQ+ GL L+
Sbjct: 387 YTYYRRAAELGYAPAQLNLGLLYIKGVGVSQSFKSAADWFQKAAEKGNSSAQVNLGL-LY 445
Query: 276 TEG 278
++G
Sbjct: 446 SQG 448
>gi|163794175|ref|ZP_02188147.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159180343|gb|EDP64864.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 380
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 29/255 (11%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + + +AL+ R+A G +K G GV ++ +AL + K A +G A
Sbjct: 107 VTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQ 166
Query: 141 VDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLL 183
+ GLMY D A+ YR+AA G AQ + EA+K
Sbjct: 167 FNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWY 226
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ GH +QY L G GV + EA +WY +AAE G+ + +N Y GEG
Sbjct: 227 RKAAEQGHASSQYNLGEMYVNGDGVTQDYAEAVKWYRKAAEQGHAGSQFNIGYMYKRGEG 286
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 298
+ + +A KW ++AA+ GH AQ GL ++ G + + A ++ +A G AA
Sbjct: 287 VTQDYAEAVKWYRKAAEQGHAGAQNNLGL-MYYNGKGVLQDTIAAHMWFNIAVVNGSKAA 345
Query: 299 DHVKNVILQQLSATS 313
+++ +LS++
Sbjct: 346 VKNRDIAAGKLSSSD 360
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD- 151
+PL E A G +K G GV ++ +AL + K A +G A + GLMY D
Sbjct: 47 KPLAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDG 106
Query: 152 ---KKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
A+ YR+AA G AQ + EA+K +A+ G AQ
Sbjct: 107 VTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQ 166
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ + L RG GV + EA +WY +AAE G A +N L Y G+G+ + +A KW
Sbjct: 167 FNIGLMYKRGDGVTQDYAEALKWYRKAAEQGRADAQFNIGLMYKRGDGVTQDYAEALKWY 226
Query: 256 KRAADCGHGKAQLEHGLGLFTEGE 279
++AA+ GH +Q G ++ G+
Sbjct: 227 RKAAEQGHASSQYNLGE-MYVNGD 249
>gi|329118664|ref|ZP_08247367.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465222|gb|EGF11504.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 328
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A L G + +GRGV KN +A + K A +G A + GLMY D
Sbjct: 124 DADAQLNLGLMYANGRGVAKNYRQAAAWWQKAADQGDAEAQYNLGLMY---DNGRGVAKN 180
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
YRQAA AA NA+ AQY L L + G+GV N ++AA WY
Sbjct: 181 YRQAAAWYQKAADQGNAD----------------AQYNLGLMYYNGQGVAQNYRQAAAWY 224
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+AA G A +N L Y G+G+ + RQA W ++AA+ GH KAQ G+ ++ G+
Sbjct: 225 QKAANQGDAAAQFNLGLMYDNGQGVAQNDRQAAAWYQKAANQGHAKAQYNLGV-MYYNGQ 283
Query: 280 MM 281
M
Sbjct: 284 GM 285
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 160 YRQAAVLGDPAAQPANAEE--AVKLLY------------------QASIAGHVRAQYQLA 199
Y QA L P AQ NAE A+ L+Y +A+ G AQ L
Sbjct: 73 YAQALRLWQPLAQKGNAEAQFALGLMYDKGQGVAKNDRQAAAWYQKAANQGDADAQLNLG 132
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
L GRGV N ++AA W+ +AA+ G A YN L Y G G+ ++RQA W ++AA
Sbjct: 133 LMYANGRGVAKNYRQAAAWWQKAADQGDAEAQYNLGLMYDNGRGVAKNYRQAAAWYQKAA 192
Query: 260 DCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
D G+ AQ GL ++ G+ + +A + + A G+ AA
Sbjct: 193 DQGNADAQYNLGL-MYYNGQGVAQNYRQAAAWYQKAANQGDAAA 235
>gi|385327769|ref|YP_005882072.1| hypothetical protein NMBB_0460 [Neisseria meningitidis alpha710]
gi|416168389|ref|ZP_11607944.1| sel1 repeat protein [Neisseria meningitidis OX99.30304]
gi|421547941|ref|ZP_15993972.1| TPR repeat protein, SEL1 subfamily [Neisseria meningitidis NM2781]
gi|308388621|gb|ADO30941.1| hypothetical protein NMBB_0460 [Neisseria meningitidis alpha710]
gi|325130845|gb|EGC53578.1| sel1 repeat protein [Neisseria meningitidis OX99.30304]
gi|402327283|gb|EJU62674.1| TPR repeat protein, SEL1 subfamily [Neisseria meningitidis NM2781]
Length = 342
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 31/237 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GVR++ +A+ + + A +G A V G+MY DK E A+ +
Sbjct: 84 GSMYAIGQGVRQDDAEAVKWYRQAAEQGDAQAQVLLGVMY---DKGEGVRQDDAQAMQRF 140
Query: 161 RQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA GD AAQ + EA++ +A+ G AQY L + H+G G
Sbjct: 141 RKAAEQGDAAAQHNLGLMYLTGEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAG 200
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +A +W+ +AAE G A +N L Y GEG+ +QA +W ++AA+ G Q
Sbjct: 201 VRQDYAQAVQWFRKAAERGKAEAQHNLGLMYLTGEGVRRDSKQAAQWFRKAAE--QGIVQ 258
Query: 268 LEHGLGL-FTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
+H LG+ + +GE ++ A + A G+ A H ++ + +DRA+
Sbjct: 259 AQHNLGIRYYKGEGVRRDYKQAAQWYRRAAEQGDAVAQHNLGLMYLKGEGVRQDRAL 315
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 91 WNDALRPLRE---------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
W D + RE A G + GRGVR++ +A+ + + AA+G A
Sbjct: 22 WADDVSDFRENLQAAEQGDAAAQYNLGAMYYKGRGVRQDDTEAVRWYRQAAAQGFAPAQA 81
Query: 142 DAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLL 183
G MY D E A+ YRQAA GD AQ + +A++
Sbjct: 82 LLGSMYAIGQGVRQDDAE-AVKWYRQAAEQGDAQAQVLLGVMYDKGEGVRQDDAQAMQRF 140
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ G AQ+ L L G GV + EA +W+ +AAE G A YN + Y G G
Sbjct: 141 RKAAEQGDAAAQHNLGLMYLTGEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAG 200
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEGEMMK 282
+ + QA +W ++AA+ GKA+ +H LGL + GE ++
Sbjct: 201 VRQDYAQAVQWFRKAAE--RGKAEAQHNLGLMYLTGEGVR 238
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G GVR++ +A+ F K A +G A + G+MY + A+ +R+AA G
Sbjct: 162 GEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAGVRQDYAQAVQWFRKAAERGKA 221
Query: 170 AAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ ++++A + +A+ G V+AQ+ L + ++G GV + ++AA
Sbjct: 222 EAQHNLGLMYLTGEGVRRDSKQAAQWFRKAAEQGIVQAQHNLGIRYYKGEGVRRDYKQAA 281
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+WY RAAE G A +N L Y GEG+ A++W+ +A G+
Sbjct: 282 QWYRRAAEQGDAVAQHNLGLMYLKGEGVRQDRALAQEWLGKACQNGN 328
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 129 LKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQP---------- 173
L+ A +G A + G MY++ D EA + YRQAA G AQ
Sbjct: 33 LQAAEQGDAAAQYNLGAMYYKGRGVRQDDTEA-VRWYRQAAAQGFAPAQALLGSMYAIGQ 91
Query: 174 ---ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ EAVK QA+ G +AQ L + +G GV + +A + + +AAE G A
Sbjct: 92 GVRQDDAEAVKWYRQAAEQGDAQAQVLLGVMYDKGEGVRQDDAQAMQRFRKAAEQGDAAA 151
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
+N L Y GEG+ + +A +W ++AA+ G +AQ G+ G + +AV +
Sbjct: 152 QHNLGLMYLTGEGVRQDYAEAMQWFRKAAEQGIAEAQYNLGVMYHKGAGVRQDYAQAVQW 211
Query: 287 LELATRAGETAADH 300
A G+ A H
Sbjct: 212 FRKAAERGKAEAQH 225
>gi|189502274|ref|YP_001957991.1| hypothetical protein Aasi_0895 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497715|gb|ACE06262.1| hypothetical protein Aasi_0895 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1493
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 19/196 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G G+ +N +A+ F K A +G A G MY + AI Y++A
Sbjct: 690 GFMYQNGYGLSQNYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGLSQNYQEAIKWYQKA 749
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ N +EA+K +A+ G++ AQ L G+GV+
Sbjct: 750 AEQGHADAQNNLGFTYQNGYGLSQNYQEAIKWYQKAAEQGNMYAQNWLGFMYENGQGVEK 809
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N ++A WY +AA+ GY A YN Y G+G+ ++++A KW ++AA+ G+ AQ
Sbjct: 810 NYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQNYQEAIKWYQKAAEKGNAAAQC-- 867
Query: 271 GLGLFTEGEMMKAVVY 286
GLG E + A Y
Sbjct: 868 GLGFMYENGLGVAQSY 883
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GV+++ KA + F K A +G+ A G MY Q G
Sbjct: 618 GVAYYNGQGVQQDYVKAKECFAKAADQGNMHAQNWLGFMY--------------QHGQGG 663
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N +EA+K +A+ G AQ L G G+ N QEA +W+ +AA+ G
Sbjct: 664 -----PQNYQEAIKWFQKAADQGLADAQNNLGFMYQNGYGLSQNYQEAIKWFQKAADQGL 718
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A + Y G GL ++++A KW ++AA+ GH AQ ++G GL
Sbjct: 719 AAAQNSLGFMYQNGYGLSQNYQEAIKWYQKAAEQGHADAQNNLGFTYQNGYGL 771
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G G+ +N +A+ + K A +G A + G Y + AI Y++A
Sbjct: 726 GFMYQNGYGLSQNYQEAIKWYQKAAEQGHADAQNNLGFTYQNGYGLSQNYQEAIKWYQKA 785
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ N +A++ +A+ G+ AQY L G+GV
Sbjct: 786 AEQGNMYAQNWLGFMYENGQGVEKNYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQ 845
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH--GKAQL 268
N QEA +WY +AAE G A Y G G+ S+ A KW ++ A+ + GKA L
Sbjct: 846 NYQEAIKWYQKAAEKGNAAAQCGLGFMYENGLGVAQSYEGAVKWYQKGAEQENMSGKANL 905
Query: 269 EHGLGLFTEGE-MMKAVVYLELATRAGETAADHVKN 303
++ EG+ +MK +V A + + A +KN
Sbjct: 906 GR---MYYEGKGIMKDIV---KANKLFQEAVSTIKN 935
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +E V L + + G V+AQ L + G GV ++++A WY +AA G+V A N
Sbjct: 450 NEKEDVPTLTRKAQQGDVKAQQALGVMYESGNGVTKDVKKAVEWYQKAAMQGHVEAQCNL 509
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y G G+ QA W ++AAD G+ KAQ + G+
Sbjct: 510 GGMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGM 547
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 151 DKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQ 197
++KE +L R+A GD AQ A + ++AV+ +A++ GHV AQ
Sbjct: 450 NEKEDVPTLTRKAQ-QGDVKAQQALGVMYESGNGVTKDVKKAVEWYQKAAMQGHVEAQCN 508
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L GRG+ + +A WY +AA+ GY +A Y + Y G G+ QA W ++
Sbjct: 509 LGGMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGMMYELGRGIAKDENQALHWYQK 568
Query: 258 AADCGHGKAQ 267
AA G+ AQ
Sbjct: 569 AAGQGNSIAQ 578
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+GV +N +A+ + K A +G+ A G MY E A+ Y++
Sbjct: 834 GDMYDNGKGVSQNYQEAIKWYQKAAEKGNAAAQCGLGFMYENGLGVAQSYEGAVKWYQKG 893
Query: 164 A--------------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
A ++ D +EAV + + G + Q L
Sbjct: 894 AEQENMSGKANLGRMYYEGKGIMKDIVKANKLFQEAVSTIKNWAEKGDIGPQNLLGWMYQ 953
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G+GV N QEA WY +AA+ ++ A + + Y G+G+ ++A KW ++AAD
Sbjct: 954 YGQGVGQNDQEAVLWYQKAAKQEHIVAQFRLASMYEHGQGVTKDLQEATKWYQKAAD 1010
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G ++ GRG+ K+ +A + K A +G A G+MY E+ + + A+ Y++
Sbjct: 510 GGMYELGRGIGKDEHQATYWYQKAADQGYAKAQYKLGMMY-ELGRGIAKDENQALHWYQK 568
Query: 163 AAVLGDPAAQPANAEEAVKLL-----YQASIAGHVRA--------QYQLALCLHRGRGVD 209
AA G+ AQ E AV +++ G+ ++ Q L + + G+GV
Sbjct: 569 AAGQGNSIAQRKVKELAVNDKGWVKGKDSNLKGYKKSGEQIDASEQVNLGVAYYNGQGVQ 628
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
+ +A + +AA+ G + A Y G+G P ++++A KW ++AAD G AQ
Sbjct: 629 QDYVKAKECFAKAADQGNMHAQNWLGFMYQHGQGGPQNYQEAIKWFQKAADQGLADAQNN 688
Query: 268 ----LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
++G GL +A+ + + A G AA + + Q S++
Sbjct: 689 LGFMYQNGYGLSQ--NYQEAIKWFQKAADQGLAAAQNSLGFMYQNGYGLSQN 738
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 102 MVLLRW-GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAA 156
M W G +++G+GV KN KA++ + K A +G A + G MY + A
Sbjct: 791 MYAQNWLGFMYENGQGVEKNYRKAIEWYQKAADQGYAYAQYNLGDMYDNGKGVSQNYQEA 850
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
I Y++AA G+ AAQ + E AVK + + ++ + L +
Sbjct: 851 IKWYQKAAEKGNAAAQCGLGFMYENGLGVAQSYEGAVKWYQKGAEQENMSGKANLGRMYY 910
Query: 204 RGRGVDFNLQEAARWYLRA-------AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
G+G+ ++ +A + + A AE G + Y +G+G+ + ++A W +
Sbjct: 911 EGKGIMKDIVKANKLFQEAVSTIKNWAEKGDIGPQNLLGWMYQYGQGVGQNDQEAVLWYQ 970
Query: 257 RAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
+AA H AQ EHG G+ + L+ AT+ + AAD
Sbjct: 971 KAAKQEHIVAQFRLASMYEHGQGVTKD---------LQEATKWYQKAADQ 1011
>gi|189501781|ref|YP_001957498.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497222|gb|ACE05769.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus
5a2]
Length = 2413
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
R A + G + +G GV K+ ++A+ F K A +G+ A + G+MY +++
Sbjct: 2193 RHADAQFKLGVMYHNGEGVAKDDNQAIKWFQKAAEQGNADAQFNLGVMYEKVE------- 2245
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
N ++A+K +A+ GH AQ++L + H G GV + +A W
Sbjct: 2246 ---------------GNYKKAIKWFQKAAEQGHADAQFKLGVMYHNGEGVAKDDNQAVFW 2290
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTE 277
Y +AA V+A + + Y G+G+ +++A KW + AA+ G+ AQ G+ E
Sbjct: 2291 YRKAAGQRNVKAQFKLGVMYYHGQGVGQDYKKAIKWYQIAAEQGNADAQFNLGVMYEKVE 2350
Query: 278 GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 314
G KA+ + +A G A VI +++ +
Sbjct: 2351 GNYKKAIEWYRIAAEQGNADAQFNLGVIYEKVEGNYK 2387
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q AN E + I H AQ++L + H G GV + +A +W+ +AAE G A
Sbjct: 2182 QGANTEAKI-------IDRHADAQFKLGVMYHNGEGVAKDDNQAIKWFQKAAEQGNADAQ 2234
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+N + Y EG ++++A KW ++AA+ GH AQ + G+ ++ GE
Sbjct: 2235 FNLGVMYEKVEG---NYKKAIKWFQKAAEQGHADAQFKLGV-MYHNGE 2278
>gi|340363638|ref|ZP_08685961.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|419798040|ref|ZP_14323483.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|339885317|gb|EGQ75046.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|385696381|gb|EIG26870.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 271
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 23/175 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G+GVR++ +A+ F K A +G A + G+MY DK E A+ Y
Sbjct: 84 GVAYINGQGVRQDDAQAVQWFGKAAEQGYAKAQYNLGVMY---DKGEGVRQDHAQAVQWY 140
Query: 161 RQAAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA GD AQ AN + +AV+ +A+ GH +AQY L G+G
Sbjct: 141 RKAAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGMYANGKG 200
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V NL +A +WY +AAE G A YN + Y G+G+ +++ A++W +A D G
Sbjct: 201 VLQNLVQAEQWYRKAAEQGIAEAQYNLGVMYDNGQGVRQNYKIAKEWFGKACDNG 255
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GVR++ +A+ + K A +G A + G+ Y + G
Sbjct: 48 GVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAY-----------------ING 90
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q + +AV+ +A+ G+ +AQY L + +G GV + +A +WY +AAE G
Sbjct: 91 QGVRQ--DDAQAVQWFGKAAEQGYAKAQYNLGVMYDKGEGVRQDHAQAVQWYRKAAEQGD 148
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A YN + Y+ G+G+ QA +W ++AA GH KAQ G G++ G+
Sbjct: 149 APAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLG-GMYANGK 199
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV+ +A+ GH +AQY L + G+GV + +A +W+ +AAE GY +A YN +
Sbjct: 63 QAVQWYRKAAEQGHAKAQYNLGVAYINGQGVRQDDAQAVQWFGKAAEQGYAKAQYNLGVM 122
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y GEG+ H QA +W ++AA+ G AQ G+ ++ G+ ++
Sbjct: 123 YDKGEGVRQDHAQAVQWYRKAAEQGDAPAQYNLGV-MYANGQGVR 166
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G AQY L + G+GV + +A +WY +AAE G+ +A YN + Y G+G+
Sbjct: 34 QAAEQGFAAAQYNLGVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGV 93
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
QA +W +AA+ G+ KAQ G+ ++ +GE + +AV + A G+ A
Sbjct: 94 RQDDAQAVQWFGKAAEQGYAKAQYNLGV-MYDKGEGVRQDHAQAVQWYRKAAEQGDAPAQ 152
Query: 300 HVKNVILQQLSATSRDRAMLV 320
+ V+ +D A V
Sbjct: 153 YNLGVMYANGQGVRQDDAQAV 173
>gi|319639040|ref|ZP_07993798.1| Sel1 domain-containing protein repeat-containing protein [Neisseria
mucosa C102]
gi|317399944|gb|EFV80607.1| Sel1 domain-containing protein repeat-containing protein [Neisseria
mucosa C102]
Length = 299
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 27/244 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR++ +A+ + K A +G T A + GLMY D E A+ +R+
Sbjct: 41 GVMYADGQGVRQDYAEAVKWYRKAAKQGDTRAQSNLGLMYVNGKGVRQDYAE-AVRWFRK 99
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AAQ N + EA K ++A+ G AQ L + G+G+
Sbjct: 100 AAEQGDAAAQSNLGVMYVNGQGVHQDYAEAAKWFHKAAEQGSAEAQLNLGVMYANGQGMI 159
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EAA+WY +AAE G +A YN + Y+ G+G+ + +A KW ++A G KAQ
Sbjct: 160 QDYVEAAKWYRKAAEQGDAQAQYNLGVMYTDGQGVRQDYVEAVKWYRKATKQGDVKAQYN 219
Query: 270 HGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G+ ++ G+ ++AV ++E A G A + NV + + + V +W
Sbjct: 220 LGV-MYANGQGVRQNYVQAVKWIEKAAMQGHVKAQY--NVGAMYANGQGVRQNLRVAKAW 276
Query: 325 RAMP 328
M
Sbjct: 277 LGMA 280
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV ++ +A F K A +GS A ++ G+MY D EAA YR+
Sbjct: 113 GVMYVNGQGVHQDYAEAAKWFHKAAEQGSAEAQLNLGVMYANGQGMIQDYVEAA-KWYRK 171
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ + EAVK +A+ G V+AQY L + G+GV
Sbjct: 172 AAEQGDAQAQYNLGVMYTDGQGVRQDYVEAVKWYRKATKQGDVKAQYNLGVMYANGQGVR 231
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N +A +W +AA G+V+A YN Y+ G+G+ + R A+ W+ A + G+
Sbjct: 232 QNYVQAVKWIEKAAMQGHVKAQYNVGAMYANGQGVRQNLRVAKAWLGMACNNGN 285
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
K+L+ A G+V AQY L + G+GV + EA +WY +AA+ G RA N L Y
Sbjct: 24 KILWVAE-QGYVPAQYILGVMYADGQGVRQDYAEAVKWYRKAAKQGDTRAQSNLGLMYVN 82
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G+G+ + +A +W ++AA+ G AQ G+ ++ G+
Sbjct: 83 GKGVRQDYAEAVRWFRKAAEQGDAAAQSNLGV-MYVNGQ 120
>gi|299530688|ref|ZP_07044103.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298721204|gb|EFI62146.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 427
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A ++ YR+
Sbjct: 150 GSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQA-VNWYRK 208
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ A+ +AV+ +++ +G QY L + L GRGV
Sbjct: 209 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 268
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ + A +W+ +AAE G+ A YNT + Y+ G +P +A +W++++A G+ AQ
Sbjct: 269 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 328
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G L+ G+ + +A + + A + G T A
Sbjct: 329 LGF-LYANGQGVPQDAGQAARWFDRAAKQGYTLA 361
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
QY L G+GV+ +L +A WY ++A+ GY A + + Y+ G G+ L QA W
Sbjct: 146 QYLLGSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQAVNW 205
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVIL 306
++AA+ G G AQ GL ++ EG + +AV + E + ++GE A + V+L
Sbjct: 206 YRKAAEQGDGIAQNNLGL-MYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVML 261
>gi|343504481|ref|ZP_08742194.1| Sel1 domain-containing protein [Vibrio ichthyoenteri ATCC 700023]
gi|342811471|gb|EGU46509.1| Sel1 domain-containing protein [Vibrio ichthyoenteri ATCC 700023]
Length = 443
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEMDKKE---AAISLY 160
L G+ + +GV +N +AL+ + K A + + A + A ++ + + E AA+ Y
Sbjct: 140 LNVGRMLEFAQGVEENPQQALEWYHKAAEQDNAEAQYNMATMLAYGIGTDEDLGAALYWY 199
Query: 161 RQAAVLGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
QAA AQ + A EA+K A+ GHV AQY LA+ L+ G G
Sbjct: 200 YQAAEQNHLEAQYSVALMLELGKGIEKDKSEAIKWYLIAAQQGHVEAQYNLAMMLYFGIG 259
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N Q+A W+L+AAE G++ A YN + Y FG G+ + +A W AA+ GH AQ
Sbjct: 260 TSENKQDAFIWHLKAAEQGHIEAQYNVGMMYDFGLGVEPNKTKALIWYHNAAENGHADAQ 319
Query: 268 LE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
+ LG+ T +A + A + G AA + V+L+
Sbjct: 320 FSLASLYELGVGTPVNKKEAYRWYVKAAKQGSVAAQYNLGVMLE 363
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-----------------YWEMDKK 153
+ HG G+ +N A +LK A +G A ++ G M Y + ++
Sbjct: 110 YYHGDGIAENRAMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENPQQALEWYHKAAEQ 169
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
+ A + Y A +L + A+ YQA+ H+ AQY +AL L G+G++ +
Sbjct: 170 DNAEAQYNMATMLAYGIGTDEDLGAALYWYYQAAEQNHLEAQYSVALMLELGKGIEKDKS 229
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
EA +WYL AA+ G+V A YN ++ FG G + + A W +AA+ GH +AQ G+
Sbjct: 230 EAIKWYLIAAQQGHVEAQYNLAMMLYFGIGTSENKQDAFIWHLKAAEQGHIEAQYNVGMM 289
Query: 273 ---GLFTEGEMMKAVVYLELATRAGETAA 298
GL E KA+++ A G A
Sbjct: 290 YDFGLGVEPNKTKALIWYHNAAENGHADA 318
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 86 LVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
L C + A + +E L G ++ G G N +KA + F + A G + A G
Sbjct: 16 LGCTHYATAHQTGKETYDL---GVQYYFGNGASINKNKAFELFSQAAKDGHSEAQYYLGH 72
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
MY+ G+ P + +A + + +A+ G+VRAQY LA + G
Sbjct: 73 MYY-----------------FGETT--PVDKAQATRWMEKAAEQGNVRAQYHLATMYYHG 113
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
G+ N A WYL+AAE G+ +A N F +G+ + +QA +W +AA+ + +
Sbjct: 114 DGIAENRAMAFHWYLKAAEQGHAKAQLNVGRMLEFAQGVEENPQQALEWYHKAAEQDNAE 173
Query: 266 AQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
AQ L +G+G T+ ++ A+ + A A + ++L+ +D++
Sbjct: 174 AQYNMATMLAYGIG--TDEDLGAALYWYYQAAEQNHLEAQYSVALMLELGKGIEKDKS 229
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G +N A LK A +G A + G+MY E +K +A I Y AA G
Sbjct: 257 GIGTSENKQDAFIWHLKAAEQGHIEAQYNVGMMYDFGLGVEPNKTKALI-WYHNAAENGH 315
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AQ P N +EA + +A+ G V AQY L + L G+G++ N+ EA
Sbjct: 316 ADAQFSLASLYELGVGTPVNKKEAYRWYVKAAKQGSVAAQYNLGVMLEAGKGIEQNIDEA 375
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY AAE G V + Y Y + A W ++AA GH KAQ
Sbjct: 376 IAWYTMAAEQGDVESQYILGTLYGAENDEFENQHLAMMWYQKAAKQGHEKAQ 427
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQAAVLGDP 169
G+G+ K+ +A+ +L A +G A + +M + + K+ A + +AA G
Sbjct: 221 GKGIEKDKSEAIKWYLIAAQQGHVEAQYNLAMMLYFGIGTSENKQDAFIWHLKAAEQGHI 280
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ N +A+ + A+ GH AQ+ LA G G N +EA
Sbjct: 281 EAQYNVGMMYDFGLGVEPNKTKALIWYHNAAENGHADAQFSLASLYELGVGTPVNKKEAY 340
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
RWY++AA+ G V A YN + G+G+ + +A W AA+ G ++Q
Sbjct: 341 RWYVKAAKQGSVAAQYNLGVMLEAGKGIEQNIDEAIAWYTMAAEQGDVESQ 391
>gi|295112076|emb|CBL28826.1| FOG: TPR repeat, SEL1 subfamily [Synergistetes bacterium SGP1]
Length = 488
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G R++ GRG+ +N +A + + + A +G A + G MY++ E A+ YR+A
Sbjct: 297 GLRYEEGRGIERNNVRAAEWYQRAAEQGLADAQFNLGTMYYDGQGVEQDYSKAVMWYRKA 356
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ + +A +A+ G AQ+ L + +G++
Sbjct: 357 AGQGDAEAQFNLGVMYYGGQGIEQDYAKAAMWYRRAAEQGVAAAQFNLGVMYSENQGLER 416
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N +AA W+LRAAE GY A +N L Y GEG+ H +A KW ++AA+ G AQ
Sbjct: 417 NYAKAAEWFLRAAEQGYTAAQFNLGLLYEEGEGVEQDHEEAIKWYRKAAEAGDIDAQ 473
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA + G ++ GRGV + KA + +L+ A +G A G+MY E
Sbjct: 73 EATAQCKLGIMYEEGRGVEQGDAKAAEWYLRAAEQGEATAQCKLGIMYEE---------- 122
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ NA+ AV +A+I G+V Q++L + +G G++ + ++AA+WY
Sbjct: 123 --------GRGVEQDNAK-AVMWYRKAAIQGNVEGQFRLGVMYTKGWGIEKDYKKAAKWY 173
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ AE G + Y GEG+ ++ +A +W ++AA+ G+ AQ + G+
Sbjct: 174 RKVAEQGVSGVQFIVGAMYEKGEGVEQNYTEAAEWYRKAAEQGNATAQCKLGI 226
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W--EMDKKE 154
EA + G ++ GRGV ++ KA+ + K A +G+ G+MY W E D K+
Sbjct: 109 EATAQCKLGIMYEEGRGVEQDNAKAVMWYRKAAIQGNVEGQFRLGVMYTKGWGIEKDYKK 168
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
AA YR+ A G Q N EA + +A+ G+ AQ +L +
Sbjct: 169 AA-KWYRKVAEQGVSGVQFIVGAMYEKGEGVEQNYTEAAEWYRKAAEQGNATAQCKLGIM 227
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G+GV+ N EAA WY ++A+ A +N + Y G G+ + +A +W ++AA
Sbjct: 228 CEEGQGVEQNDAEAATWYRKSADQNVPEAQFNLGIMYEEGRGVEQNDIEATEWYRKAASQ 287
Query: 262 GHGKAQLEHGL 272
G AQ GL
Sbjct: 288 GIPAAQFNLGL 298
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
R G + G G+ K+ KA + K A +G + G MY E + EAA
Sbjct: 150 FRLGVMYTKGWGIEKDYKKAAKWYRKVAEQGVSGVQFIVGAMYEKGEGVEQNYTEAA-EW 208
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
YR+AA G+ AQ N EA +++ AQ+ L + GR
Sbjct: 209 YRKAAEQGNATAQCKLGIMCEEGQGVEQNDAEAATWYRKSADQNVPEAQFNLGIMYEEGR 268
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV+ N EA WY +AA G A +N L Y G G+ ++ +A +W +RAA+ G A
Sbjct: 269 GVEQNDIEATEWYRKAASQGIPAAQFNLGLRYEEGRGIERNNVRAAEWYQRAAEQGLADA 328
Query: 267 QLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
Q G G E + KAV++ A G+ A V+ +D A
Sbjct: 329 QFNLGTMYYDGQGVEQDYSKAVMWYRKAAGQGDAEAQFNLGVMYYGGQGIEQDYA 383
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+N +A FL+ A RG A G+MY E AI + N
Sbjct: 19 EENYSRAFAYFLECAKRGEADAQSILGIMY------EDAIGV-------------EQNDH 59
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + +A+ G AQ +L + GRGV+ +AA WYLRAAE G A +
Sbjct: 60 KAAEWYLRAAEQGEATAQCKLGIMYEEGRGVEQGDAKAAEWYLRAAEQGEATAQCKLGIM 119
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
Y G G+ + +A W ++AA G+ + Q G+ ++T+G
Sbjct: 120 YEEGRGVEQDNAKAVMWYRKAAIQGNVEGQFRLGV-MYTKG 159
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
LG A N A + + G AQ L + GV+ N +AA WYLRAAE
Sbjct: 12 LGGQALSEENYSRAFAYFLECAKRGEADAQSILGIMYEDAIGVEQNDHKAAEWYLRAAEQ 71
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
G A + Y G G+ +A +W RAA+ G AQ + G+ ++ EG
Sbjct: 72 GEATAQCKLGIMYEEGRGVEQGDAKAAEWYLRAAEQGEATAQCKLGI-MYEEG 123
>gi|418530603|ref|ZP_13096526.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371452322|gb|EHN65351.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 416
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A ++ YR+
Sbjct: 139 GSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQA-VNWYRK 197
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ A+ +AV+ +++ +G QY L + L GRGV
Sbjct: 198 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 257
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ + A +W+ +AAE G+ A YNT + Y+ G +P +A +W++++A G+ AQ
Sbjct: 258 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 317
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G L+ G+ + +A + + A + G T A
Sbjct: 318 LGF-LYANGQGVPQDAGQAARWFDRAAKQGYTLA 350
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
QY L G+GV+ +L +A WY ++A+ GY A + + Y+ G G+ L QA W
Sbjct: 135 QYLLGSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEAQAVNW 194
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQL 309
++AA+ G G AQ GL ++ EG + +AV + E + ++GE A + V+L
Sbjct: 195 YRKAAEQGDGIAQNNLGL-MYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSG 253
Query: 310 SATSRD-RAML 319
D RA L
Sbjct: 254 RGVKEDGRAAL 264
>gi|264677145|ref|YP_003277051.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262207657|gb|ACY31755.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 430
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A ++ YR+
Sbjct: 153 GSRYRFGKGVNQDLAQAVHWYRQSADQGYAPAQSDLGVLYANGRGVTLDEVQA-VNWYRK 211
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ A+ +AV+ +++ +G QY L + L GRGV
Sbjct: 212 AAEQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 271
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ + A +W+ +AAE G+ A YNT + Y+ G +P +A +W++++A G+ AQ
Sbjct: 272 EDGRAALQWFEQAAEKGHADAQYNTGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 331
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G L+ G+ + +A + + A + G T A
Sbjct: 332 LGF-LYANGQGVSQDAGQAARWFDRAAKQGYTLA 364
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 169 PAAQPANAEEAVKL--LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
P A+ AE+A +L + A+ G +AQY L G+GV+ +L +A WY ++A+ G
Sbjct: 121 PEARSNQAEDAKELAAMRAAAQTGDAKAQYLLGSRYRFGKGVNQDLAQAVHWYRQSADQG 180
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM----- 281
Y A + + Y+ G G+ L QA W ++AA+ G G AQ GL ++ EG +
Sbjct: 181 YAPAQSDLGVLYANGRGVTLDEVQAVNWYRKAAEQGDGIAQNNLGL-MYAEGRGVAADDA 239
Query: 282 KAVVYLELATRAGETAADHVKNVIL 306
+AV + E + ++GE A + V+L
Sbjct: 240 QAVQWFERSAKSGEAAGQYSLGVML 264
>gi|397664659|ref|YP_006506197.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395128070|emb|CCD06275.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 375
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 24/220 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ GH ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 248
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 304
G+ G+ + +KA + A G E AA +V ++
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNVSDL 348
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 75/192 (39%), Gaps = 26/192 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ E Y++A
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGYYWYLNTPEG----YKKAFEWY 114
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 115 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 158
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 159 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDYQK 217
Query: 283 AVVYLELATRAG 294
A Y E A G
Sbjct: 218 AAEYFEKAANQG 229
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 27 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 86
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 87 NVDAQVLLAGYYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 146
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 147 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 206
Query: 308 QLSATSRD 315
Q +D
Sbjct: 207 QGDGVPKD 214
>gi|348506557|ref|XP_003440825.1| PREDICTED: protein sel-1 homolog 1 [Oreochromis niloticus]
Length = 805
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A D F + A G+T AM G MY E + E A+ +++A+ LG+
Sbjct: 379 GRGVEQNHQRAYDYFNQAANAGNTHAMAFLGKMYSEGSEFLPQNNETALQYFKKASDLGN 438
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 439 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 498
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++ G++ A YN + ++ G G+ S A + K + G +L G F
Sbjct: 499 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYGSF 558
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
EG++ A+V YL LA + E A +V ++ Q+
Sbjct: 559 KEGDLDAALVQYLLLAEQGYEVAQSNVAFILDQK 592
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW E+A++ YR
Sbjct: 254 GFLYAAGLGVNSSQAKALVYYTFGALGGNLVAHMILGYRYWGGVGVPQSCESALTHYRLV 313
Query: 164 A--VLGDPAAQPANAEEAVKLL-------------------YQASIA--GHVRAQYQLA- 199
A V D + +A + ++LL Y +A G V+AQ L
Sbjct: 314 ANQVASDVSLTGGSAVQRIRLLDEVENPGSTSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 373
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G E LP ++ A ++ K+A
Sbjct: 374 LHLHGGRGVEQNHQRAYDYFNQAANAGNTHAMAFLGKMYSEGSEFLPQNNETALQYFKKA 433
Query: 259 ADCGHGKAQLEHGLGL 274
+D G+ Q GLG+
Sbjct: 434 SDLGNPVGQ--SGLGM 447
>gi|197117496|ref|YP_002137923.1| SEL1 repeat-containing lipoprotein [Geobacter bemidjiensis Bem]
gi|197086856|gb|ACH38127.1| SEL1 repeat-containing protein [Geobacter bemidjiensis Bem]
Length = 270
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV +N+ +AL F + A GS A + G +Y MD EA + Y +
Sbjct: 56 GVLYYNGLGVGRNVSEALHWFRRAADLGSAEAQANLGQLYETGDGVTMDLAEA-MKWYGK 114
Query: 163 AAVLGDPAAQP------ANAE-EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AA GDP AQ A +E ++ + ++ GHV AQY LA + G V + +EA
Sbjct: 115 AAAGGDPDAQHDFDRLRAESEPRRIRWYRRDALLGHVTAQYNLADAYYHGEEVPQDKREA 174
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG---- 271
A+WYL+AAE G V A Y L G+G+ + + W+++AA GH +AQ + G
Sbjct: 175 AKWYLKAAEQGNVPAQYMLGLMLLQGDGVQNASAEGVAWLRKAASSGHREAQYQMGRCLL 234
Query: 272 LGLFTEGEMMKAVVYLELATRAGE-TAADHVKNV 304
G+ + +AV++L A GE TA +K V
Sbjct: 235 QGIGVRRDSEEAVLWLRKAAAQGEPTAVAALKEV 268
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 197 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+L + + G GV N+ EA W+ RAA+ G A N Y G+G+ + +A KW
Sbjct: 54 KLGVLYYNGLGVGRNVSEALHWFRRAADLGSAEAQANLGQLYETGDGVTMDLAEAMKWYG 113
Query: 257 RAADCGHGKAQ 267
+AA G AQ
Sbjct: 114 KAAAGGDPDAQ 124
>gi|221068658|ref|ZP_03544763.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713681|gb|EED69049.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 425
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R++ G+GV ++L +A+ + + A +G A D G++Y +D+ +A +S YR+
Sbjct: 148 GSRYRFGKGVNQDLAQAVHWYRQSAEQGYAPAQSDLGVLYANGRGVTLDEAQA-VSWYRK 206
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ A+ +AV+ +++ +G QY L + L GRGV
Sbjct: 207 AADQGDGIAQNNLGLMYAEGRGVAADDAQAVQWFERSAKSGEAAGQYSLGVMLSSGRGVK 266
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ + A +W+ +AAE G+ A YN + Y+ G +P +A +W++++A G+ AQ
Sbjct: 267 EDGRAALQWFEQAAEKGHADAQYNAGMIYAVGALVPQDLTRAARWLEKSAGQGNAAAQSS 326
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G L+ G+ + +A + + A + G T A
Sbjct: 327 LGF-LYANGQGVAQDAGQAARWFDRAAKQGYTLA 359
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 169 PAAQPANAEEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
P A+ AE+A +L + A G +AQY L G+GV+ +L +A WY ++AE G
Sbjct: 116 PEARNNQAEDAKELAVMRAEAQTGDAKAQYLLGSRYRFGKGVNQDLAQAVHWYRQSAEQG 175
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMM 281
Y A + + Y+ G G+ L QA W ++AAD G G AQ GL ++ EG +
Sbjct: 176 YAPAQSDLGVLYANGRGVTLDEAQAVSWYRKAADQGDGIAQNNLGL-MYAEGRGVAADDA 234
Query: 282 KAVVYLELATRAGETAADHVKNVIL 306
+AV + E + ++GE A + V+L
Sbjct: 235 QAVQWFERSAKSGEAAGQYSLGVML 259
>gi|349610788|ref|ZP_08890114.1| hypothetical protein HMPREF1028_02089, partial [Neisseria sp.
GT4A_CT1]
gi|348615607|gb|EGY65119.1| hypothetical protein HMPREF1028_02089 [Neisseria sp. GT4A_CT1]
Length = 454
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 31/236 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
+ +G+GVR++ +A+ + K A +G+ A + G+MY D + A+ YR+A
Sbjct: 18 YNNGQGVRQDYMQAVHWYRKAAEQGNVNAQFNLGVMY---DTGQGVRQDYAQAVQWYRKA 74
Query: 164 AVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ AN + +AV+ +A+ G +AQY+L + GRGV
Sbjct: 75 AEQGLADAQYNLGVMYANGQGVRQDDAQAVQWYRKAAEQGIAKAQYKLGVAYTNGRGVRQ 134
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+L +A +W+ +AAE G+ +A YN + Y+ G+G+ + QA +W ++AA+ G KAQ +
Sbjct: 135 DLVQAVQWFGKAAEQGHAKAQYNLGVMYANGQGVRQGYTQAVQWYRKAAEQGDAKAQ--Y 192
Query: 271 GLGLFTEGE------MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
LG+ + E +AV + A G A + V+ ++ +D A V
Sbjct: 193 NLGVMYDNERGVRQDYAQAVHWYRKAAEQGIAQAQYNLGVMYEKGLGVRQDDAQAV 248
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + +G+GVR+ +A+ + K A +G A + G+MY D + A+ Y
Sbjct: 159 GVMYANGQGVRQGYTQAVQWYRKAAEQGDAKAQYNLGVMY---DNERGVRQDYAQAVHWY 215
Query: 161 RQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G AQ + +AV+ +A+ G AQY L + GRG
Sbjct: 216 RKAAEQGIAQAQYNLGVMYEKGLGVRQDDAQAVQWYRKAAEQGIAEAQYNLGVMYKEGRG 275
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +A +WY +AAE G A N + Y+ G+G+ + QA +W ++AA+ G AQ
Sbjct: 276 VRQDDAQAVQWYRKAAEQGLANAQSNLGVAYTNGQGVRQDYAQAVQWYRKAAEQGLADAQ 335
Query: 268 LEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ ++ EG ++ AV + A + G+ A + + Q +D A V
Sbjct: 336 SNLGV-MYKEGRGVRQDDAQAVQWYRKAAKQGDAEAQYNLGGMYVQGRGVRQDDAQAV 392
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGVR++L +A+ F K A +G A + G+MY A RQ
Sbjct: 123 GVAYTNGRGVRQDLVQAVQWFGKAAEQGHAKAQYNLGVMY-------ANGQGVRQGYT-- 173
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+AV+ +A+ G +AQY L + RGV + +A WY +AAE G
Sbjct: 174 ----------QAVQWYRKAAEQGDAKAQYNLGVMYDNERGVRQDYAQAVHWYRKAAEQGI 223
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+A YN + Y G G+ QA +W ++AA+ G +AQ G+ ++ EG
Sbjct: 224 AQAQYNLGVMYEKGLGVRQDDAQAVQWYRKAAEQGIAEAQYNLGV-MYKEG 273
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + + EA L G +K GRGVR++ +A+ + K A +G A + G+ Y
Sbjct: 255 AEQGIAEAQYNL--GVMYKEGRGVRQDDAQAVQWYRKAAEQGLANAQSNLGVAYTNGQGV 312
Query: 150 -MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQ 195
D +A + YR+AA G AQ + +AV+ +A+ G AQ
Sbjct: 313 RQDYAQA-VQWYRKAAEQGLADAQSNLGVMYKEGRGVRQDDAQAVQWYRKAAKQGDAEAQ 371
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L +GRGV + +A +WY +AAE G A YN + Y+ GEG+ +++ A++W
Sbjct: 372 YNLGGMYVQGRGVRQDDAQAVQWYRKAAEQGLAEAQYNLGVMYAKGEGVRQNYKIAKEWF 431
Query: 256 KRAADCG 262
+A D G
Sbjct: 432 GKACDNG 438
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GVR++ +A+ + K A +G A + G+MY E D +A + YR+
Sbjct: 231 GVMYEKGLGVRQDDAQAVQWYRKAAEQGIAEAQYNLGVMYKEGRGVRQDDAQA-VQWYRK 289
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ N + +AV+ +A+ G AQ L + GRGV
Sbjct: 290 AAEQGLANAQSNLGVAYTNGQGVRQDYAQAVQWYRKAAEQGLADAQSNLGVMYKEGRGVR 349
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A +WY +AA+ G A YN Y G G+ QA +W ++AA+ G +AQ
Sbjct: 350 QDDAQAVQWYRKAAKQGDAEAQYNLGGMYVQGRGVRQDDAQAVQWYRKAAEQGLAEAQYN 409
Query: 270 HGLGLFTEGEMMK 282
G+ ++ +GE ++
Sbjct: 410 LGV-MYAKGEGVR 421
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G +AQ+ L + G+GV + +A WY +AAE G V A +N + Y G+G+
Sbjct: 2 AAEQGIAKAQFNLGFMYNNGQGVRQDYMQAVHWYRKAAEQGNVNAQFNLGVMYDTGQGVR 61
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+ QA +W ++AA+ G AQ G+ ++ G+ ++
Sbjct: 62 QDYAQAVQWYRKAAEQGLADAQYNLGV-MYANGQGVR 97
>gi|325981066|ref|YP_004293468.1| Sel1 domain-containing protein repeat-containing protein
[Nitrosomonas sp. AL212]
gi|325530585|gb|ADZ25306.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
AL212]
Length = 1145
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 24/230 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKK---EA 155
+AM L G + G GV ++L+KAL + + GST A+V+ G+ + E D K E
Sbjct: 659 DAMNFL--GLFYLKGIGVVRDLEKALYWYQQAVKHGSTAAIVNLGVCFTEGKDIKQNWEK 716
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI L++ AA LG+ A N ++AV L QA G A LA C
Sbjct: 717 AIDLFQWAADLGNNIAMLNLGVRYEKGEGVEQNWDKAVDLYQQAIKHGSSEAMVNLAQCY 776
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV+ N EA Y +AAE G A+ N CY GEG+ + +A + +RAA G
Sbjct: 777 AKGTGVEQNWNEAFHLYRQAAEQGISLALNNLGSCYEKGEGVEQNWEKAIIYYQRAALQG 836
Query: 263 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA-DHVKNVILQ 307
+ A + G G + KAV + A + GET A D+++ +L+
Sbjct: 837 NPSAMVNLGAYYQYGPINQQNWNKAVDLYQKAFKGGETKALDNIRYTLLE 886
Score = 39.3 bits (90), Expect = 2.9, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V ++WN+A R+A + L G ++ G GV +N +KA+ + + A +G+ AM
Sbjct: 782 VEQNWNEAFHLYRQAAEQGISLALNNLGSCYEKGEGVEQNWEKAIIYYQRAALQGNPSAM 841
Query: 141 VDAGLMYW----EMDKKEAAISLYRQAAVLGDPAA 171
V+ G Y A+ LY++A G+ A
Sbjct: 842 VNLGAYYQYGPINQQNWNKAVDLYQKAFKGGETKA 876
>gi|410634931|ref|ZP_11345556.1| hypothetical protein GLIP_0106 [Glaciecola lipolytica E3]
gi|410145505|dbj|GAC12761.1| hypothetical protein GLIP_0106 [Glaciecola lipolytica E3]
Length = 853
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ G GV ++ +A+ F K + + A+V+ GL Y D K A LY A
Sbjct: 667 GILYRDGDGVTQSHSEAVKWFRKSVEQDNADALVNLGLQYSRGDGVPQNKAEAARLYLAA 726
Query: 164 AVLGDPAAQPA------NAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD Q N E EA+K +++ GH AQ L L RG GV
Sbjct: 727 AEKGDEWGQNNLGALYRNGEGVQQSHTEAIKWFRKSADQGHASAQVNLGLQYERGHGVTQ 786
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ EA +WY +AAE G V Y+ LCY +G G+ S A +W K+AA GH +Q
Sbjct: 787 SNTEAVKWYRKAAEQGNVWGQYDLGLCYEYGRGVNKSLSTAIEWYKKAARGGHKSSQ 843
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----- 147
+ L P +A+ R G +++G+ V K+ +A+ + + +A+G + + G M+
Sbjct: 581 EGLNP-SDAVEQFRLGNDYRNGKDVEKSYPQAIYWYTRSSAQGHGGSSNNLGFMHEYGYG 639
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRA 194
+ KEAA Y + A GD AQ + EAVK ++ + A
Sbjct: 640 LKKSSKEAA-KWYMKGAEQGDDYAQNNIGILYRDGDGVTQSHSEAVKWFRKSVEQDNADA 698
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
L L RG GV N EAAR YL AAE G N Y GEG+ SH +A KW
Sbjct: 699 LVNLGLQYSRGDGVPQNKAEAARLYLAAAEKGDEWGQNNLGALYRNGEGVQQSHTEAIKW 758
Query: 255 MKRAADCGHGKAQLEHGL 272
+++AD GH AQ+ GL
Sbjct: 759 FRKSADQGHASAQVNLGL 776
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---------------W-----EMD 151
++G G++K+ +A ++KGA +G A + G++Y W E D
Sbjct: 635 EYGYGLKKSSKEAAKWYMKGAEQGDDYAQNNIGILYRDGDGVTQSHSEAVKWFRKSVEQD 694
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+A ++L Q + GD P N EA +L A+ G Q L G GV +
Sbjct: 695 NADALVNLGLQYS-RGDGV--PQNKAEAARLYLAAAEKGDEWGQNNLGALYRNGEGVQQS 751
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
EA +W+ ++A+ G+ A N L Y G G+ S+ +A KW ++AA+ G+ Q + G
Sbjct: 752 HTEAIKWFRKSADQGHASAQVNLGLQYERGHGVTQSNTEAVKWYRKAAEQGNVWGQYDLG 811
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAA 298
L G + A+ + + A R G ++
Sbjct: 812 LCYEYGRGVNKSLSTAIEWYKKAARGGHKSS 842
>gi|224023873|ref|ZP_03642239.1| hypothetical protein BACCOPRO_00590 [Bacteroides coprophilus DSM
18228]
gi|224017095|gb|EEF75107.1| hypothetical protein BACCOPRO_00590 [Bacteroides coprophilus DSM
18228]
Length = 318
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 17/178 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W-EMDKKEAAISLYRQA 163
G + +G G R++ +A+D + A RG+ A + G +Y W + ++AA++ YR+A
Sbjct: 115 GFMYTYGLGTRQDFGEAMDWLYRAALRGNPKAQLGMGNLYKNGWGPVRNEQAALNWYRRA 174
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ A P N EEA+ +A+ G+ AQY + G+GVD
Sbjct: 175 AAHGNSDAMNNIGYMYRNGLGVPRNYEEALFWFQKAANLGNSSAQYNIGNLYCWGKGVDK 234
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
++ + ARW L++A A YN + Y +G+G+ + +A KW +RAA GH KA L
Sbjct: 235 DIVQGARWMLKSALQENAPAQYNLARMYQWGKGVEKNQEEAMKWYRRAAAQGHEKAML 292
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G G G +L +AL+ FL A + A +AG MY G
Sbjct: 79 GDLLYRGEGGPADLPEALNLFLMAARQEHVDAQANAGFMY-----------------TYG 121
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q + EA+ LY+A++ G+ +AQ + G G N Q A WY RAA G
Sbjct: 122 LGTRQ--DFGEAMDWLYRAALRGNPKAQLGMGNLYKNGWGPVRNEQAALNWYRRAAAHGN 179
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
AM N Y G G+P ++ +A W ++AA+ G+ AQ G
Sbjct: 180 SDAMNNIGYMYRNGLGVPRNYEEALFWFQKAANLGNSSAQYNIG 223
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ+ L L+RG G +L EA +L AA +V A N Y++G G +A
Sbjct: 74 AQFLLGDLLYRGEGGPADLPEALNLFLMAARQEHVDAQANAGFMYTYGLGTRQDFGEAMD 133
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG 278
W+ RAA G+ KAQL G L+ G
Sbjct: 134 WLYRAALRGNPKAQLGMG-NLYKNG 157
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
PA+ EA+ L A+ HV AQ G G + EA W RAA G +A
Sbjct: 89 PADLPEALNLFLMAARQEHVDAQANAGFMYTYGLGTRQDFGEAMDWLYRAALRGNPKAQL 148
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLE 288
Y G G + + A W +RAA G+ A G GL +A+ + +
Sbjct: 149 GMGNLYKNGWGPVRNEQAALNWYRRAAAHGNSDAMNNIGYMYRNGLGVPRNYEEALFWFQ 208
Query: 289 LATRAGETAADH 300
A G ++A +
Sbjct: 209 KAANLGNSSAQY 220
>gi|284799409|ref|ZP_05983910.2| TPR repeat protein [Neisseria subflava NJ9703]
gi|284797776|gb|EFC53123.1| TPR repeat protein [Neisseria subflava NJ9703]
Length = 420
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 28/221 (12%)
Query: 87 VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K + AL+ R +A+ G + +G GV ++ +A+ + K A +G+ A
Sbjct: 170 VGKDYEKALKWFRRAAGHGDAIGQYNLGVAYANGEGVHQDYIQAIGWYRKAAEQGNVDAQ 229
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ--------------PANAEEAVK 181
+ G MY D EA I YR+AA GD AQ NA+ AV+
Sbjct: 230 YNLGDMYASGEGVRQDYVEA-IKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQ-AVQ 287
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
+A+ GH +AQY L + G+G+ + +A RWY +AAE G +A +N + Y G
Sbjct: 288 WFGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQAVRWYHKAAEQGVAQAQFNLGIMYDQG 347
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+G+ QA W ++AA+ G+ +AQ G+ ++ GE ++
Sbjct: 348 QGVRQDDAQAVHWYRKAAEQGYAEAQYNFGV-MYANGEGVR 387
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLY 160
L G + +G+GV K+ +KAL F + A G + + G+ Y + AI Y
Sbjct: 158 LNLGMLYANGQGVGKDYEKALKWFRRAAGHGDAIGQYNLGVAYANGEGVHQDYIQAIGWY 217
Query: 161 RQAAVLGDPAAQ------PANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G+ AQ A+ E EA+K +A+ G +AQ+ L + +G+G
Sbjct: 218 RKAAEQGNVDAQYNLGDMYASGEGVRQDYVEAIKWYRKAAEQGDAQAQFNLGMMYLQGQG 277
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +A +W+ RAAE G+ +A YN + Y+ G+G+ QA +W +AA+ G +AQ
Sbjct: 278 VRQDNAQAVQWFGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQAVRWYHKAAEQGVAQAQ 337
Query: 268 LEHGLGLFTEGEMMK 282
G+ ++ +G+ ++
Sbjct: 338 FNLGI-MYDQGQGVR 351
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GVR++ +A+ + K A +G A + G+MY + D +A + + +
Sbjct: 233 GDMYASGEGVRQDYVEAIKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQA-VQWFGR 291
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ AN + +AV+ ++A+ G +AQ+ L + +G+GV
Sbjct: 292 AAEQGHAKAQYNLGVMYANGQGIRQDDVQAVRWYHKAAEQGVAQAQFNLGIMYDQGQGVR 351
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A WY +AAE GY A YN + Y+ GEG+ +++ A+ W +A D G
Sbjct: 352 QDDAQAVHWYRKAAEQGYAEAQYNFGVMYANGEGVRQNYKIAKDWFGKACDNG 404
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A + + K A +G T A + G++Y D +AA YR
Sbjct: 89 GVMYQLGQGVGQDYVQAAEWYRKAAEQGDTGAQNNLGMLYQNGQGVSQDYAQAAEWFYRA 148
Query: 163 AA------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A + + + E+A+K +A+ G QY L + G GV
Sbjct: 149 ANQENTDAQLNLGMLYANGQGVGKDYEKALKWFRRAAGHGDAIGQYNLGVAYANGEGVHQ 208
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY +AAE G V A YN Y+ GEG+ + +A KW ++AA+ G +AQ
Sbjct: 209 DYIQAIGWYRKAAEQGNVDAQYNLGDMYASGEGVRQDYVEAIKWYRKAAEQGDAQAQFNL 268
Query: 271 GLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ ++ +G+ ++ AV + A G A + V+ +D V
Sbjct: 269 GM-MYLQGQGVRQDNAQAVQWFGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQAV 322
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 28/289 (9%)
Query: 68 VLNKIAASFTLPQLRAASLVCKSWNDALRPLREA--MVLLRWGKRFKHGRGVRKNLDKAL 125
++ + A F L Q A + + + LR + L G + +G+G+ ++ A+
Sbjct: 12 IIMGVMACFGLGQAALAESI-PDFKNMLRAAEQGDPEAQLSIGAMYANGQGISQDNRLAV 70
Query: 126 DSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQ-------- 172
F K A + + A + G+MY D +AA YR+AA GD AQ
Sbjct: 71 QWFRKAAEQENAKAQFNLGVMYQLGQGVGQDYVQAA-EWYRKAAEQGDTGAQNNLGMLYQ 129
Query: 173 -----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A + Y+A+ + AQ L + G+GV + ++A +W+ RAA G
Sbjct: 130 NGQGVSQDYAQAAEWFYRAANQENTDAQLNLGMLYANGQGVGKDYEKALKWFRRAAGHGD 189
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMK 282
YN + Y+ GEG+ + QA W ++AA+ G+ AQ G ++ GE ++
Sbjct: 190 AIGQYNLGVAYANGEGVHQDYIQAIGWYRKAAEQGNVDAQYNLG-DMYASGEGVRQDYVE 248
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 331
A+ + A G+ A ++ Q +D A V RA H
Sbjct: 249 AIKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQAVQWFGRAAEQGH 297
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 71 KIAASFTLPQLRAASL-VCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDK 123
+ A + L + A+ V + + +A++ R +A G + G+GVR++ +
Sbjct: 225 NVDAQYNLGDMYASGEGVRQDYVEAIKWYRKAAEQGDAQAQFNLGMMYLQGQGVRQDNAQ 284
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ------ 172
A+ F + A +G A + G+MY D +A + Y +AA G AQ
Sbjct: 285 AVQWFGRAAEQGHAKAQYNLGVMYANGQGIRQDDVQA-VRWYHKAAEQGVAQAQFNLGIM 343
Query: 173 -------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+ +AV +A+ G+ AQY + G GV N + A W+ +A +
Sbjct: 344 YDQGQGVRQDDAQAVHWYRKAAEQGYAEAQYNFGVMYANGEGVRQNYKIAKDWFGKACDN 403
Query: 226 GYVRA 230
G R
Sbjct: 404 GLQRG 408
>gi|257063145|ref|YP_003142817.1| hypothetical protein Shel_04070 [Slackia heliotrinireducens DSM
20476]
gi|256790798|gb|ACV21468.1| TPR repeat-containing protein [Slackia heliotrinireducens DSM 20476]
Length = 1032
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
E + G+ +G+G KN +A F + A G LAM G+MY +
Sbjct: 839 ETESMYNLGRMLANGQGTGKNPLEAAQWFRRAAEDGHELAMYHLGVMYANGEGVARNPHE 898
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A++ YR+AA LG+ A N ++A + +A GHV A LAL
Sbjct: 899 ALTWYRKAADLGNANAMYNLGVMLAGGIGVERNPQQAARWYRKAIGKGHVAAMNNLALMY 958
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
RG GV+ NL+EA W+ AA+ G AMYN + Y G+G+ ++A+ W ++AA G
Sbjct: 959 ERGEGVEKNLKEAVSWWKIAAKKGSPNAMYNLARMYESGQGVAKDKKEAQNWYRKAASYG 1018
Query: 263 HGKAQL 268
AQL
Sbjct: 1019 QAGAQL 1024
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEA-AISLYRQAAV 165
R +G GV+KN +A + + K A G AM GLMY + + K A A+ +R+AA
Sbjct: 741 RLANGGGVKKNAKQAANWYRKAADAGHAPAMNSLGLMYEQGEGVAKNHAEAMRWFRKAAD 800
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ A N EA + +A+ G + Y L L G+G N
Sbjct: 801 AGNVMAMCNMGRMLSTGKEASKNLMEAAQWYRKAAEFGETESMYNLGRMLANGQGTGKNP 860
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EAA+W+ RAAE G+ AMY+ + Y+ GEG+ + +A W ++AAD G+ A G+
Sbjct: 861 LEAAQWFRRAAEDGHELAMYHLGVMYANGEGVARNPHEALTWYRKAADLGNANAMYNLGV 920
Query: 273 GL 274
L
Sbjct: 921 ML 922
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +AVK A+ G+ A Y LA+ L G GV N ++AA WY +AA+ G+ AM +
Sbjct: 715 NLAQAVKWYRDAANLGNPNAMYNLAVRLANGGGVKKNAKQAANWYRKAADAGHAPAMNSL 774
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE----MMKAVVYLELA 290
L Y GEG+ +H +A +W ++AAD G+ A G L T E +M+A + A
Sbjct: 775 GLMYEQGEGVAKNHAEAMRWFRKAADAGNVMAMCNMGRMLSTGKEASKNLMEAAQWYRKA 834
Query: 291 TRAGETAADHVKNVILQQLSATSRD 315
GET + + +L T ++
Sbjct: 835 AEFGETESMYNLGRMLANGQGTGKN 859
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK-KEAAIS 158
+++ G+ ++ G GVRKN A+ + A++G+T AM G +Y E +D+ ++ A
Sbjct: 523 AMIKMGEAYESGEGVRKNKKSAVKFYRDAASQGNTEAMCKLGALYEEGSGVDRNRQEAAE 582
Query: 159 LYRQAAVLGDPAAQPA--------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
YR+AA LG A A +A A L A+ G+ A LA L +G G
Sbjct: 583 WYRKAAKLGSTEATCALGKLCRKHDASTAFGLFESAAKEGNAEAMGILADMLSQGEGTGA 642
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ Q A WY +AA+ G AMYN + + G + ++A W ++AA
Sbjct: 643 DRQTALLWYCKAADAGNAEAMYNLGVKCANGIDVEKDQQKAIGWYRKAA 691
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 85/215 (39%), Gaps = 54/215 (25%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGA----------------------------------- 132
G R + G GV +N+ AL +LKGA
Sbjct: 167 GLRAEIGEGVERNIGTALSHYLKGADLGDPDCQYRAAYLLDTEESLAFQRGRCAALYESA 226
Query: 133 -ARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ--------------P 173
+ G+ A+ + L Y D A L AA LG+ AAQ P
Sbjct: 227 ASSGNADALSNLALFYLSGDLVGRNPVRAAELMESAAKLGNAAAQYNLAIIYRDGEDGVP 286
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
A+ A+ L A+ G A +A +G G N +EAARWY +AAE G + AMY
Sbjct: 287 ADLNRAIPLFKAAAEQGDADAALAVADACAQGEGAVKNPKEAARWYRKAAEAGRMDAMYE 346
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
L Y G G+ + R+A W ++AAD G+ A
Sbjct: 347 LGLLYERGNGVTENRREAVSWYRKAADAGNADAMF 381
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
G G KN +A + K A G AM + GL+Y + + A+S YR+AA G+
Sbjct: 317 QGEGAVKNPKEAARWYRKAAEAGRMDAMYELGLLYERGNGVTENRREAVSWYRKAADAGN 376
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + EA L +A+ AGH +A + + G GV + EA
Sbjct: 377 ADAMFRLASIRLHGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGVMYAHGDGVKKDATEA 436
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A WY +AA+ G AM N + + G+G+ ++A ++A+D L++ LG +
Sbjct: 437 ASWYRKAADAGVTGAMCNLGIMHERGDGVAKDPQEAASLYRKASD-------LDNALGAY 489
Query: 276 TEGEMM 281
G M+
Sbjct: 490 NLGIML 495
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA--AISLYRQAAVLGD 168
HG G +K+L +A D F + A G AM + G+MY D KK+A A S YR+AA G
Sbjct: 389 HGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGVMYAHGDGVKKDATEAASWYRKAADAGV 448
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + +EA L +AS + Y L + L G GV N QEA
Sbjct: 449 TGAMCNLGIMHERGDGVAKDPQEAASLYRKASDLDNALGAYNLGIMLLNGSGVAKNPQEA 508
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A RAA G AM Y GEG+ + + A K+ + AA G+ +A + G L+
Sbjct: 509 ALHLRRAAALGNTEAMIKMGEAYESGEGVRKNKKSAVKFYRDAASQGNTEAMCKLG-ALY 567
Query: 276 TEG 278
EG
Sbjct: 568 EEG 570
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 18/231 (7%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAIS 158
+ G + HG GV+K+ +A + K A G T AM + G+M+ D + A S
Sbjct: 415 AMFNTGVMYAHGDGVKKDATEAASWYRKAADAGVTGAMCNLGIMHERGDGVAKDPQEAAS 474
Query: 159 LYRQAAVLGDP-------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
LYR+A+ L + + N +EA L +A+ G+ A ++ G
Sbjct: 475 LYRKASDLDNALGAYNLGIMLLNGSGVAKNPQEAALHLRRAAALGNTEAMIKMGEAYESG 534
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV N + A ++Y AA G AM Y G G+ + ++A +W ++AA G +
Sbjct: 535 EGVRKNKKSAVKFYRDAASQGNTEAMCKLGALYEEGSGVDRNRQEAAEWYRKAAKLGSTE 594
Query: 266 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
A G L + + A E A + G A + +L Q T DR
Sbjct: 595 ATCALGK-LCRKHDASTAFGLFESAAKEGNAEAMGILADMLSQGEGTGADR 644
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM--YWEMDKKE--A 155
EAM L G + +G V K+ KA+ + K A G AM G + Y K
Sbjct: 661 EAMYNL--GVKCANGIDVEKDQQKAIGWYRKAADAGHAAAMCSLGTICEYGNGVTKNLAQ 718
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR AA LG+P A NA++A +A+ AGH A L L
Sbjct: 719 AVKWYRDAANLGNPNAMYNLAVRLANGGGVKKNAKQAANWYRKAADAGHAPAMNSLGLMY 778
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV N EA RW+ +AA+ G V AM N S G+ + +A +W ++AA+ G
Sbjct: 779 EQGEGVAKNHAEAMRWFRKAADAGNVMAMCNMGRMLSTGKEASKNLMEAAQWYRKAAEFG 838
Query: 263 H 263
Sbjct: 839 E 839
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +EA + +A+ AG + A Y+L L RG GV N +EA WY +AA+ G AM+
Sbjct: 324 NPKEAARWYRKAAEAGRMDAMYELGLLYERGNGVTENRREAVSWYRKAADAGNADAMFRL 383
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+ G G +A KRAA+ GH +A G+ ++ G+ +K
Sbjct: 384 ASIRLHGNGAKKDLAEAFDLFKRAAEAGHPQAMFNTGV-MYAHGDGVK 430
>gi|397667881|ref|YP_006509418.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395131292|emb|CCD09555.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 375
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 29/246 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ GH ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 248
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 270 HGL----GLFTEGEMMKAVVYLELA-----TRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ G+ + +KA + A +A A+D K++ + LS +R
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNASDLEKSMNPEDLS-KARTLGQQY 367
Query: 321 VDSWRA 326
D+++A
Sbjct: 368 TDNYKA 373
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 75/192 (39%), Gaps = 26/192 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ E Y++A
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEG----YKKAFEWY 114
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 115 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 158
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 159 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDYQK 217
Query: 283 AVVYLELATRAG 294
A Y E A G
Sbjct: 218 AAEYFEKAANQG 229
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 27 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 86
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 87 NVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 146
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 147 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 206
Query: 308 QLSATSRD 315
Q +D
Sbjct: 207 QGDGVPKD 214
>gi|189502556|ref|YP_001958273.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497997|gb|ACE06544.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1402
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYRQAA 164
+K+G GV ++ KA++ + K A +G T+A + G Y + DKK A+ Y++AA
Sbjct: 568 YKNGLGVAQDDAKAVEWYQKAADQGDTIAQNNLGNRYRDGRGVAQDDKK--AVEWYQKAA 625
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ + + ++A + +A+ GHV AQY L + GRGV +
Sbjct: 626 EQGQVDAQNSLGVMYDDGEGLEKDDKKAFEWYQKAAEQGHVTAQYNLGVRYGNGRGVAKD 685
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
++AA W+ +AA G A YN Y GEGL H +A W +AA+ GH AQ G
Sbjct: 686 ERKAAEWFQKAAGQGNASAQYNLGRMYDDGEGLEKDHAKAVVWYTKAAEQGHINAQYNLG 745
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ G E + KA + + A G+T A + +I + ++D
Sbjct: 746 ISYEDGEGVEKDDNKAREWYQKAADQGDTDAQYKLGIIYRNGRDVAQD 793
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAA 164
++ GRGV ++ KA++ F K A +G+ LA G MY E D+K A+ +++AA
Sbjct: 1108 YREGRGVAQDGKKAVEWFQKAAEQGNVLAQNSLGWMYREGRGVAQDDRK--AVEWHQKAA 1165
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G +AQ + + +AV+ +A+ G+ AQ L GRGV +
Sbjct: 1166 EQGHASAQNSLGFMYREGRGVVQDDAKAVEWYQKAADQGNASAQNSLGFMYREGRGVVQD 1225
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ---- 267
++A WY +AAE G A Y+ Y G + R+A +W ++AA+ GH AQ
Sbjct: 1226 DKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDRKAVEWYQKAAEQGHASAQNSLG 1285
Query: 268 --LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
E+G G+ + +KAV + + A G A +
Sbjct: 1286 WMYENGRGVAQDD--IKAVEWYQKAAEQGNIDAQN 1318
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAA 164
+K+G GV ++ KA++ F K A +G+ A G MY E D+K A+ Y++AA
Sbjct: 1000 YKNGWGVAQDDRKAVEWFQKAAEKGNASAQYSLGCMYREGRGIAQDDRK--AVEWYQKAA 1057
Query: 165 VLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
GD AQ + +AV+ +A+ G+V AQ L GRGV +
Sbjct: 1058 EKGDVLAQNNLGWMYENGRGVVQDGAKAVEWYQKAAEQGNVLAQNSLGCMYREGRGVAQD 1117
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
++A W+ +AAE G V A + Y G G+ R+A +W ++AA+ GH AQ G
Sbjct: 1118 GKKAVEWFQKAAEQGNVLAQNSLGWMYREGRGVAQDDRKAVEWHQKAAEQGHASAQNSLG 1177
Query: 272 LGLFTEG-----EMMKAVVYLELATRAGETAADH 300
++ EG + KAV + + A G +A +
Sbjct: 1178 F-MYREGRGVVQDDAKAVEWYQKAADQGNASAQN 1210
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+ +GRGV K+ KA + F K A +G+ A + G MY D E + +A V
Sbjct: 673 GVRYGNGRGVAKDERKAAEWFQKAAGQGNASAQYNLGRMY---DDGEGLEKDHAKAVVWY 729
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA+ GH+ AQY L + G GV+ + +A WY +AA+ G
Sbjct: 730 TKAAEQ----------------GHINAQYNLGISYEDGEGVEKDDNKAREWYQKAADQGD 773
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
A Y + Y G + R+A +W ++AA+ G AQ G +
Sbjct: 774 TDAQYKLGIIYRNGRDVAQDDRKAVEWFQKAAEQGLASAQYSLGFMYYN 822
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W---EMDKKEAAISLYR 161
G + +G GV ++ KA++ F K A +G+ LA G MY W + DKK A+ Y
Sbjct: 889 GAMYYNGHGVAQDDRKAVEWFQKAAEKGNVLAQNSLGCMYKNGWGVAQDDKK--AVEWYG 946
Query: 162 QAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA G AQ + + +AV+ +A+ G+V AQ L G GV
Sbjct: 947 KAAEQGQVDAQNSLGCMYKNGWGVAQDDRKAVEWFQKAAEKGNVLAQNSLGCMYKNGWGV 1006
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 267
+ ++A W+ +AAE G A Y+ Y G G+ R+A +W ++AA+ G AQ
Sbjct: 1007 AQDDRKAVEWFQKAAEKGNASAQYSLGCMYREGRGIAQDDRKAVEWYQKAAEKGDVLAQN 1066
Query: 268 -----LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
E+G G+ +G KAV + + A G A +
Sbjct: 1067 NLGWMYENGRGVVQDG--AKAVEWYQKAAEQGNVLAQN 1102
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ GRGV ++ KA++ K A +G A G MY E + A+ Y++AA
Sbjct: 1144 YREGRGVAQDDRKAVEWHQKAAEQGHASAQNSLGFMYREGRGVVQDDAKAVEWYQKAADQ 1203
Query: 167 GDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ +AQ + + ++AV+ +A+ G+ AQY L GR V + +
Sbjct: 1204 GNASAQNSLGFMYREGRGVVQDDKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDR 1263
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +AAE G+ A + Y G G+ +A +W ++AA+ G+ AQ G
Sbjct: 1264 KAVEWYQKAAEQGHASAQNSLGWMYENGRGVAQDDIKAVEWYQKAAEQGNIDAQNNLGFM 1323
Query: 274 LFTEGEM-------MKAVVYLELATRAGETAADH 300
+ +G KAV + E A G +A +
Sbjct: 1324 YYRDGRCRGVALVDRKAVEWFEKAAEQGNASAQY 1357
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G ++ G GV K+ +KA + + K A +G T A G++Y + D+K A+ ++
Sbjct: 745 GISYEDGEGVEKDDNKAREWYQKAADQGDTDAQYKLGIIYRNGRDVAQDDRK--AVEWFQ 802
Query: 162 QAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA G +AQ + + +A + +A+ G+ AQY L GRGV
Sbjct: 803 KAAEQGLASAQYSLGFMYYNGYGVVQDDAKAAEWFQKAAGQGNASAQYNLGRMYREGRGV 862
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ ++A WY +AAE G V A + Y G G+ R+A +W ++AA+ G+ AQ
Sbjct: 863 AQDDKKAVEWYGKAAEQGQVDAQNSLGAMYYNGHGVAQDDRKAVEWFQKAAEKGNVLAQ 921
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ GRGV ++ KA++ + K A +G+ A G MY E + A+ Y++A
Sbjct: 1213 GFMYREGRGVVQDDKKAVEWYQKAAEQGNASAQYSLGFMYREGRSVVQDDRKAVEWYQKA 1272
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRG---RG 207
A G +AQ + + +AV+ +A+ G++ AQ L +R RG
Sbjct: 1273 AEQGHASAQNSLGWMYENGRGVAQDDIKAVEWYQKAAEQGNIDAQNNLGFMYYRDGRCRG 1332
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V ++A W+ +AAE G A Y+ Y G G+ + +A +W ++AA+ G AQ
Sbjct: 1333 VALVDRKAVEWFEKAAEQGNASAQYSLGWMYYNGYGVAQDYAKALEWFQKAAEQGQVDAQ 1392
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +++GRG ++ KA++ F K A +G+ A + G MY + G
Sbjct: 493 GRMYRNGRGTAQDDAKAVEWFQKAADQGNASAQYNLGRMYRD-----------------G 535
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AQ + ++AV+ +A+ G+ AQ L G GV + +A WY +AA+ G
Sbjct: 536 RGVAQ--DDKKAVEWYQKAADQGNASAQANLGWMYKNGLGVAQDDAKAVEWYQKAADQGD 593
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 282
A N Y G G+ ++A +W ++AA+ G AQ G+ ++ +GE + K
Sbjct: 594 TIAQNNLGNRYRDGRGVAQDDKKAVEWYQKAAEQGQVDAQNSLGV-MYDDGEGLEKDDKK 652
Query: 283 AVVYLELATRAGETAADH 300
A + + A G A +
Sbjct: 653 AFEWYQKAAEQGHVTAQY 670
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 178 EAVKLLYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E KLL ++ G QY + GRG + +A W+ +AA+ G A YN
Sbjct: 471 EVAKLLIESGAGQGDAETQYNIGRMYRNGRGTAQDDAKAVEWFQKAADQGNASAQYNLGR 530
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
Y G G+ ++A +W ++AAD G+ AQ G GL + KAV + + A
Sbjct: 531 MYRDGRGVAQDDKKAVEWYQKAADQGNASAQANLGWMYKNGLGVAQDDAKAVEWYQKAAD 590
Query: 293 AGETAADH 300
G+T A +
Sbjct: 591 QGDTIAQN 598
>gi|290982386|ref|XP_002673911.1| predicted protein [Naegleria gruberi]
gi|284087498|gb|EFC41167.1| predicted protein [Naegleria gruberi]
Length = 360
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
KR+ G GV K+ KA + FLK A G T A G M++ + E IS
Sbjct: 213 KRYFIGEGVEKDSSKAFEWFLKAAENGETEAQFTVGSMFYNGEGIEKDIS---------- 262
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+A + +A+ G + AQ+ + L H G G D + ++ W+L+AAE GY
Sbjct: 263 ---------KAFEWYVKAAEKGQIEAQFYVGLAYHDGDGTDQDYSKSFEWFLKAAESGYT 313
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A Y L Y G G+ +A +W +AA G+ KAQ
Sbjct: 314 EAQYFVGLAYELGTGVEKDSSKAFEWYLKAATNGNEKAQ 352
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI----SLYRQA 163
GK +K G G+ K+ KA + FLK A G+ A + G Y + + E I + +A
Sbjct: 140 GKAYKKGEGIEKDYSKAFEWFLKSAEIGNADAQFNVGNAYKKGEGIEKDIVKSYEWFLKA 199
Query: 164 AVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ A+ +A + +A+ G AQ+ + + G G++
Sbjct: 200 AENGNRLAQCCTAKRYFIGEGVEKDSSKAFEWFLKAAENGETEAQFTVGSMFYNGEGIEK 259
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
++ +A WY++AAE G + A + L Y G+G + ++ +W +AA+ G+ +AQ
Sbjct: 260 DISKAFEWYVKAAEKGQIEAQFYVGLAYHDGDGTDQDYSKSFEWFLKAAESGYTEAQYFV 319
Query: 268 -LEHGLGLFTEGEMMKAVV-YLELATRAGETAADHV 301
L + LG E + KA YL+ AT E A +++
Sbjct: 320 GLAYELGTGVEKDSSKAFEWYLKAATNGNEKAQNNI 355
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G+GV+KN KA + FLK A +G+ A + +Y++M + Y + A G
Sbjct: 72 GALYKNGQGVKKNYSKAEEWFLKAAEKGNESAHRNLPPLYYKMKDYSKSFEWYLKLAEKG 131
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D +AQY + +G G++ + +A W+L++AE G
Sbjct: 132 DA-----------------------KAQYSIGKAYKKGEGIEKDYSKAFEWFLKSAEIGN 168
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEGEMMKA 283
A +N Y GEG+ ++ +W +AA+ G+ AQ + +G E + KA
Sbjct: 169 ADAQFNVGNAYKKGEGIEKDIVKSYEWFLKAAENGNRLAQCCTAKRYFIGEGVEKDSSKA 228
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ A GET A + +D
Sbjct: 229 FEWFLKAAENGETEAQFTVGSMFYNGEGIEKD 260
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
++ G V K+ KA + F+KGA +G + GL+Y + + Y +AA
Sbjct: 2 KYLDGVEVEKDEVKAFEWFMKGAEQGCIESQNRVGLLYHKGMGVQKDYSKSFEWYSKAAE 61
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD AQ N +A + +A+ G+ A L ++ + +
Sbjct: 62 KGDAKAQFNIGALYKNGQGVKKNYSKAEEWFLKAAEKGNESAHRNLPPLYYKMK----DY 117
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
++ WYL+ AE G +A Y+ Y GEG+ + +A +W ++A+ G+ AQ G
Sbjct: 118 SKSFEWYLKLAEKGDAKAQYSIGKAYKKGEGIEKDYSKAFEWFLKSAEIGNADAQFNVG 176
>gi|154250914|ref|YP_001411738.1| peptidoglycan-binding domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154154864|gb|ABS62081.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
lavamentivorans DS-1]
Length = 1012
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQY+LA +GRGV + +A WY +AA GG V+AM+N ++ ++ G G A +
Sbjct: 782 AQYRLATQYEKGRGVPQDDAKARDWYEKAAAGGNVKAMHNLAVIHAEGRGTAQDFETASR 841
Query: 254 WMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W +AAD G G +Q E GLG+ E +++A +L++A + G+ A ++ I
Sbjct: 842 WFTQAADFGLGDSQYNLAILNERGLGI--EKNLVEAYKWLDIAAKGGDKGAAAKRDAIAT 899
Query: 308 QLSATSRDRAMLVVDSWRA 326
+LSA RA + +WRA
Sbjct: 900 ELSADDLARAKIASGTWRA 918
>gi|391230754|ref|ZP_10266960.1| TPR repeat-containing protein [Opitutaceae bacterium TAV1]
gi|391220415|gb|EIP98835.1| TPR repeat-containing protein [Opitutaceae bacterium TAV1]
Length = 376
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGDP 169
GRG+R++ +A+ K A +G + GL E ++K E A+ +R+AA P
Sbjct: 126 GRGIRQDPAEAVSWLRKAAEQGHANSQYFLGLALDEGVGVEKDETGAVEWWRKAAEQDHP 185
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ + E +K Y+A+ GH AQ L L GRG + N EA
Sbjct: 186 DAQERLGYALQKGIGVTKDEAEGLKWYYKAAARGHASAQNSLGYALENGRGTEKNAAEAV 245
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
+WY AA+ G V A N +L + G G+ +A +W +++++ GH KAQ GL L T
Sbjct: 246 KWYRVAADQGQVNAQNNLALALTNGRGIAEDKIKAVEWWRKSSELGHPKAQYNLGLALIT 305
Query: 277 ----EGEMMKAVVYLELATRAGETAADH 300
E M +A ++ A G A +
Sbjct: 306 GNGVEKNMTEAAIWWRKAAEQGHAEAQN 333
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G + G GV K+ + L + K AARG A G
Sbjct: 190 RLGYALQKGIGVTKDEAEGLKWYYKAAARGHASAQNSLGY-------------------A 230
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
L + NA EAVK A+ G V AQ LAL L GRG+ + +A W+ +++E
Sbjct: 231 LENGRGTEKNAAEAVKWYRVAADQGQVNAQNNLALALTNGRGIAEDKIKAVEWWRKSSEL 290
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
G+ +A YN L G G+ + +A W ++AA+ GH +AQ G L+T
Sbjct: 291 GHPKAQYNLGLALITGNGVEKNMTEAAIWWRKAAEQGHAEAQNNLGFALWT 341
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAG---------HVRAQYQLALCLHRGRG 207
+S + G P + ++A + + QA +AG +V AQ L + L GRG
Sbjct: 69 VSQFLTGIARGVPTSGNSDAASPRQDVQQAEVAGSYRKAAEQGNVDAQCMLGVLLMTGRG 128
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + EA W +AAE G+ + Y L G G+ A +W ++AA+ H AQ
Sbjct: 129 IRQDPAEAVSWLRKAAEQGHANSQYFLGLALDEGVGVEKDETGAVEWWRKAAEQDHPDAQ 188
Query: 268 ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
L+ G+G+ T+ E Y + A R G +A + L+ T ++ A V
Sbjct: 189 ERLGYALQKGIGV-TKDEAEGLKWYYKAAAR-GHASAQNSLGYALENGRGTEKNAAEAV 245
>gi|54298117|ref|YP_124486.1| hypothetical protein lpp2174 [Legionella pneumophila str. Paris]
gi|53751902|emb|CAH13326.1| hypothetical protein lpp2174 [Legionella pneumophila str. Paris]
Length = 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 29/246 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 128 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 186
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ GH ++Q +L G+
Sbjct: 187 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 246
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 247 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 306
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAG-----ETAADHVKNVILQQLSATSRDRAMLV 320
G+ G+ + +KA + A G A+D K++ + LS +R
Sbjct: 307 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKATSNASDLEKSMNPEDLS-KARTLGQQY 365
Query: 321 VDSWRA 326
D+++A
Sbjct: 366 TDNYKA 371
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 75/192 (39%), Gaps = 26/192 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ E Y++A
Sbjct: 57 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEG----YKKAFEWY 112
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 113 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 156
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 157 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDYQK 215
Query: 283 AVVYLELATRAG 294
A Y E A G
Sbjct: 216 AAEYFEKAANQG 227
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 25 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 84
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 85 NVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 144
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 145 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 204
Query: 308 QLSATSRD 315
Q +D
Sbjct: 205 QGDGVPKD 212
>gi|169826234|ref|YP_001696392.1| suppressor of lin-12-like protein (Sel-1L) [Lysinibacillus
sphaericus C3-41]
gi|168990722|gb|ACA38262.1| Suppressor of lin-12-like protein (Sel-1L) [Lysinibacillus
sphaericus C3-41]
Length = 619
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK--EAAISLYRQ 162
G F G+G+ +N +A + A G+ A + G++Y + M + EAA Y
Sbjct: 202 GVLFHLGQGIEQNYTEAAHHYQIAADLGNADAQYNLGVLYNQGLGMSQNFLEAA-KWYTL 260
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ +AQ + EA A++AG AQY L +GRG+
Sbjct: 261 AADQGNTSAQNNLGFLYHNGTGVEQSYVEASTYFEMAALAGDASAQYNLGYMHLKGRGIP 320
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N EAA+W+ AA ++ A + ++ Y+ G+G+P+ H +A KW K AA GH AQ
Sbjct: 321 QNFTEAAKWFHMAALQDHMNAEFQIAMLYNTGQGIPMDHLEALKWFKLAAHKGHLHAQFY 380
Query: 270 HGLGLFTEGEMMKAVVYLELATRAGETAA 298
GL E +M+ A +L LA G +A
Sbjct: 381 LGLLYEKEQDMVLAEKWLLLAAEKGHISA 409
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EEA + A+I GH AQYQL +G+GV + EAA+W +AA +++A Y +
Sbjct: 497 EEARRCYRLAAIQGHAGAQYQLGNLFDKGKGVTQDYTEAAKWIEQAAAQEHIKAQYQLAQ 556
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ G+G+P +A + + AA+ GH KAQ + GL L+ +G+
Sbjct: 557 MHIHGQGVPKDFAKAAQLYRLAANQGHQKAQFQLGL-LYKKGQ 598
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
LP L+AA+ K + DA L G G GV N +A+ + +
Sbjct: 428 LPYLKAAA--EKGYVDAQYEL---------GLLLTAGDGVPVNYPEAVQWWRAATDQSHI 476
Query: 138 LAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEA 179
A GL+Y + +D +EA YR AA+ G AQ + EA
Sbjct: 477 QAEYQLGLVYEQGLGVSIDLEEAR-RCYRLAAIQGHAGAQYQLGNLFDKGKGVTQDYTEA 535
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
K + QA+ H++AQYQLA G+GV + +AA+ Y AA G+ +A + L Y
Sbjct: 536 AKWIEQAAAQEHIKAQYQLAQMHIHGQGVPKDFAKAAQLYRLAANQGHQKAQFQLGLLYK 595
Query: 240 FGEGLPLSHRQARKWMKRA 258
G+G+ +++A KW+K++
Sbjct: 596 KGQGVAQDYQEATKWLKKS 614
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 58/262 (22%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G G+ +N +A + A +G+T A + G +Y E A + + A
Sbjct: 238 GVLYNQGLGMSQNFLEAAKWYTLAADQGNTSAQNNLGFLYHNGTGVEQSYVEASTYFEMA 297
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ GD +AQ P N EA K + A++ H+ A++Q+A+ + G+G+
Sbjct: 298 ALAGDASAQYNLGYMHLKGRGIPQNFTEAAKWFHMAALQDHMNAEFQIAMLYNTGQGIPM 357
Query: 211 NLQEAARWY--------------------------------LRAAEGGYVRAMYNTSLCY 238
+ EA +W+ L AAE G++ A + Y
Sbjct: 358 DHLEALKWFKLAAHKGHLHAQFYLGLLYEKEQDMVLAEKWLLLAAEKGHISAGFELGRLY 417
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRA 293
+ P +A ++K AA+ G+ AQ E GL L T G+ + +AV + AT
Sbjct: 418 VYQLHQP---DKALPYLKAAAEKGYVDAQYELGL-LLTAGDGVPVNYPEAVQWWRAATDQ 473
Query: 294 GETAADHVKNVILQQLSATSRD 315
A++ ++ +Q S D
Sbjct: 474 SHIQAEYQLGLVYEQGLGVSID 495
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQY L ++GRGV + A WY RAA+ A Y+ + + G+G+
Sbjct: 153 AAQNGDASAQYNLGALYNQGRGVKKDYALAKMWYERAADQNDPNAHYSLGVLFHLGQGIE 212
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHV 301
++ +A + AAD G+ AQ G+ GL ++A + LA G T+A
Sbjct: 213 QNYTEAAHHYQIAADLGNADAQYNLGVLYNQGLGMSQNFLEAAKWYTLAADQGNTSAQ-- 270
Query: 302 KNVILQQLSATSRDRAMLVVDSWRAMPSL 330
N+ + T +++ + ++ M +L
Sbjct: 271 NNLGFLYHNGTGVEQSYVEASTYFEMAAL 299
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG- 271
+ AA W+ AA+ G A YN Y+ G G+ + A+ W +RAAD A G
Sbjct: 144 KHAAEWFEIAAQNGDASAQYNLGALYNQGRGVKKDYALAKMWYERAADQNDPNAHYSLGV 203
Query: 272 ---LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
LG E +A + ++A G A + V+ Q S++
Sbjct: 204 LFHLGQGIEQNYTEAAHHYQIAADLGNADAQYNLGVLYNQGLGMSQN 250
>gi|148264055|ref|YP_001230761.1| Sel1 domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397555|gb|ABQ26188.1| Sel1 domain protein repeat-containing protein [Geobacter
uraniireducens Rf4]
Length = 172
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +E+VK L +++ G VRAQY LA+ +G GV+ + EAA+WY +AAE G+ ++ +N
Sbjct: 70 NRKESVKWLRKSAEQGFVRAQYNLAMMYDKGDGVNKDQTEAAKWYRKAAEKGHAQSQFNI 129
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L Y+ GEG+ ++A KW+++AA GH AQ
Sbjct: 130 GLMYTNGEGVGKDKKEAVKWLRKAAKQGHPNAQ 162
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G ++ Y L++ ++G GV+ N +E+ +W ++AE G+VRA YN ++ Y G+G+
Sbjct: 49 GGAQSSYALSIIYYKGEGVEPNRKESVKWLRKSAEQGFVRAQYNLAMMYDKGDGVNKDQT 108
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNV 304
+A KW ++AA+ GH ++Q GL ++T GE + +AV +L A + G A + V
Sbjct: 109 EAAKWYRKAAEKGHAQSQFNIGL-MYTNGEGVGKDKKEAVKWLRKAAKQGHPNAQKLLKV 167
Query: 305 I 305
+
Sbjct: 168 M 168
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV N +++ K A +G A + +MY DK GD
Sbjct: 61 YYKGEGVEPNRKESVKWLRKSAEQGFVRAQYNLAMMY---DK--------------GDGV 103
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ + EA K +A+ GH ++Q+ + L G GV + +EA +W +AA+ G+ A
Sbjct: 104 NK--DQTEAAKWYRKAAEKGHAQSQFNIGLMYTNGEGVGKDKKEAVKWLRKAAKQGHPNA 161
>gi|333030530|ref|ZP_08458591.1| Sel1 domain protein repeat-containing protein [Bacteroides
coprosuis DSM 18011]
gi|332741127|gb|EGJ71609.1| Sel1 domain protein repeat-containing protein [Bacteroides
coprosuis DSM 18011]
Length = 209
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 35/178 (19%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ +G+GV KN +A + F+K A +G+ +A G++Y E++ K AA Y++
Sbjct: 23 GLRYSYGKGVTKNYKEAFNWFVKSAKQGNVMAQNGLGVLYSSGKGVELNYKNAA-RWYKK 81
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA LGDP AQ+ LA+ G GV NL+EA W+ A
Sbjct: 82 AAELGDP-----------------------YAQFNLAVLYKNGLGVPLNLEEALDWFREA 118
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A G A N + Y GEG+ +++ +A W K+AA+ G KA+ E GLG+
Sbjct: 119 AMQGDSAAQNNLGIMYKKGEGVEVNYEKAFHWFKKAAEQGDVKAEANLGEMYEDGLGV 176
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +EA +++ G+V AQ L + G+GV+ N + AARWY +AAE G A +N
Sbjct: 35 NYKEAFNWFVKSAKQGNVMAQNGLGVLYSSGKGVELNYKNAARWYKKAAELGDPYAQFNL 94
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLEL 289
++ Y G G+PL+ +A W + AA G AQ G+ ++ +GE + KA + +
Sbjct: 95 AVLYKNGLGVPLNLEEALDWFREAAMQGDSAAQNNLGI-MYKKGEGVEVNYEKAFHWFKK 153
Query: 290 ATRAGETAAD 299
A G+ A+
Sbjct: 154 AAEQGDVKAE 163
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG AQY+L L G+GV N +EA W++++A+ G V A + YS G+G+ L++
Sbjct: 13 AGCADAQYELGLRYSYGKGVTKNYKEAFNWFVKSAKQGNVMAQNGLGVLYSSGKGVELNY 72
Query: 249 RQARKWMKRAADCGHGKAQL------EHGLGL 274
+ A +W K+AA+ G AQ ++GLG+
Sbjct: 73 KNAARWYKKAAELGDPYAQFNLAVLYKNGLGV 104
>gi|240949135|ref|ZP_04753482.1| Sel1 domain protein, repeat-containing protein [Actinobacillus
minor NM305]
gi|240296438|gb|EER47074.1| Sel1 domain protein, repeat-containing protein [Actinobacillus
minor NM305]
Length = 177
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
+ N +EA +++ + G+ AQY L L +GRGV + ++AA+WY +AAE GY A
Sbjct: 39 EQGNYQEAARIVKDYAERGYATAQYDLGLMYEKGRGVAQDYRQAAKWYQKAAEQGYSEAQ 98
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N Y+ G+G+ +RQA KW ++AA+ G+ KAQ G+ GL + + A ++
Sbjct: 99 FNLGGMYARGQGVAQDYRQATKWWQKAAEQGYSKAQFNLGVMYDNGLGVKKNIKTAKKWV 158
Query: 288 ELATRAG-ETAADHVKN 303
E A G + A D++++
Sbjct: 159 EKACNGGVQKACDNLRS 175
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 19/135 (14%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH 191
A RG A D GLMY +K YRQAA AA+ G+
Sbjct: 54 AERGYATAQYDLGLMY---EKGRGVAQDYRQAAKWYQKAAEQ----------------GY 94
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
AQ+ L RG+GV + ++A +W+ +AAE GY +A +N + Y G G+ + + A
Sbjct: 95 SEAQFNLGGMYARGQGVAQDYRQATKWWQKAAEQGYSKAQFNLGVMYDNGLGVKKNIKTA 154
Query: 252 RKWMKRAADCGHGKA 266
+KW+++A + G KA
Sbjct: 155 KKWVEKACNGGVQKA 169
>gi|148826087|ref|YP_001290840.1| Sel1 domain-containing protein [Haemophilus influenzae PittEE]
gi|148716247|gb|ABQ98457.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae PittEE]
Length = 384
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 161 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 219
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EAVK +A+ GH +AQY L GRGV
Sbjct: 220 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 279
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +AAE GY A N YS G G+ + +A KW K+AA+ G Q +
Sbjct: 280 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQDYIEAVKWFKKAAENGSADGQFK 339
Query: 270 HGL 272
GL
Sbjct: 340 LGL 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----W 148
PL E A + G +K G+G++++ +A+ F K A +G A ++ G MY
Sbjct: 39 PLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNWGNMYAKGLGV 98
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
+ D EA + YRQAA G+ AQ + EAVK +A+ G+ AQ
Sbjct: 99 KQDDVEA-VKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYADAQ 157
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L + G GV + EA +WY +AAE GY A +N Y G G+ +A KW
Sbjct: 158 FNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWY 217
Query: 256 KRAADCGHGKAQLEHGLGLFTEGEMMK 282
++AA+ G+ AQ G ++ G +K
Sbjct: 218 RKAAEQGYADAQFNLG-NMYYNGHGVK 243
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 197 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 255
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ AN EAVK +A+ G+ AQ L G GV
Sbjct: 256 AAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVR 315
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ EA +W+ +AAE G + L Y G+G+ A++W+ +A D G+
Sbjct: 316 QDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGN 369
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + + + A KL + G+ Q+ L L +G+G+ + EA +W+ +AAE G
Sbjct: 21 GLEATKRGDYQTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQG 80
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A N Y+ G G+ +A KW ++AA+ G+ KAQ GL ++ G +K
Sbjct: 81 VADAQLNWGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGL-MYDNGRGVK 135
>gi|428165092|gb|EKX34096.1| hypothetical protein GUITHDRAFT_98165 [Guillardia theta CCMP2712]
Length = 347
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 18/185 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ GRGV+K+L K++ + A G A G ++ + + A SL+ +
Sbjct: 159 GVCYEKGRGVQKDLVKSIKYYTNAANAGDASAQYKLGECFYYGRSGLKENFQEAASLFSK 218
Query: 163 AAVLGDPAAQ------------PANAE-EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A G AQ N+E +A L +A+ GH +A+YQ+A C + GRGV+
Sbjct: 219 ACEQGLAKAQYMLGLCHYYGQGVENSESKAADLFLKAAEQGHPQAEYQIAACYYSGRGVE 278
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
NL++A W+ +AA+ + A Y+ CY +G G+P S +A ++ AA+ GH +A+
Sbjct: 279 KNLEKAVEWFEKAAKQSHPVAQYSLGQCYYYGRGVPKSEEKALEYYTMAANQGHAQAKYW 338
Query: 270 HGLGL 274
G+ L
Sbjct: 339 IGIIL 343
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN EAVK +A+ GH+ AQY L +C++ GRGVD N+++A WYL+AA+ G+V A Y
Sbjct: 98 ANESEAVKWYTKAAEKGHLDAQYNLGVCMYYGRGVDRNIEQAVAWYLKAADQGHVAAEYA 157
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+CY G G+ ++ K+ AA+ G AQ + G
Sbjct: 158 LGVCYEKGRGVQKDLVKSIKYYTNAANAGDASAQYKLG 195
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V+A ++ + L GRG + N EA +WY +AAE G++ A YN +C +G G+ +
Sbjct: 78 GDVKAMFETGMSLLAGRGCEANESEAVKWYTKAAEKGHLDAQYNLGVCMYYGRGVDRNIE 137
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
QA W +AAD GH A+ G+ G + +++K++ Y A AG+ +A +
Sbjct: 138 QAVAWYLKAADQGHVAAEYALGVCYEKGRGVQKDLVKSIKYYTNAANAGDASAQY 192
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-MYWE--MDKKEAAISLYRQAAVLGDPA 170
GRG N +A+ + K A +G A + G+ MY+ +D+
Sbjct: 93 GRGCEANESEAVKWYTKAAEKGHLDAQYNLGVCMYYGRGVDR------------------ 134
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N E+AV +A+ GHV A+Y L +C +GRGV +L ++ ++Y AA G A
Sbjct: 135 ----NIEQAVAWYLKAADQGHVAAEYALGVCYEKGRGVQKDLVKSIKYYTNAANAGDASA 190
Query: 231 MYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y C+ +G GL + ++A +A + G KAQ GL
Sbjct: 191 QYKLGECFYYGRSGLKENFQEAASLFSKACEQGLAKAQYMLGL 233
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
AASL K+ L + + L + +G+GV + KA D FLK A +G A
Sbjct: 211 EAASLFSKACEQGLAKAQYMLGLCHY-----YGQGVENSESKAADLFLKAAEQGHPQAEY 265
Query: 142 DAGLMYWE---MDKK-EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLY 184
Y+ ++K E A+ + +AA P AQ P + E+A++
Sbjct: 266 QIAACYYSGRGVEKNLEKAVEWFEKAAKQSHPVAQYSLGQCYYYGRGVPKSEEKALEYYT 325
Query: 185 QASIAGHVRAQYQLALCL 202
A+ GH +A+Y + + L
Sbjct: 326 MAANQGHAQAKYWIGIIL 343
>gi|52842435|ref|YP_096234.1| hypothetical protein lpg2222 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778123|ref|YP_005186561.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629546|gb|AAU28287.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508938|gb|AEW52462.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 375
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 24/220 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ GH ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGK 248
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 304
G+ G+ + +KA + A G E AA + ++
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNASDL 348
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 75/192 (39%), Gaps = 26/192 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ E Y++A
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEG----YKKAFEWY 114
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 115 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 158
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 159 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDYQK 217
Query: 283 AVVYLELATRAG 294
A Y E A G
Sbjct: 218 AAEYFEKAANQG 229
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 27 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 86
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 87 NVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 146
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 147 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 206
Query: 308 QLSATSRD 315
Q +D
Sbjct: 207 QGDGVPKD 214
>gi|424043622|ref|ZP_17781245.1| cobalamin biosynthesis CobT VWA domain protein [Vibrio cholerae
HENC-03]
gi|408888151|gb|EKM26612.1| cobalamin biosynthesis CobT VWA domain protein [Vibrio cholerae
HENC-03]
Length = 936
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G +++G+GV ++ +A+ + K A +G A + G MY E E A+S YR+A
Sbjct: 351 GWMYRNGKGVPQDDAQAVYWYRKAADQGYARAESNLGWMYEEGKGVPQDDEQAVSWYRKA 410
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD Q P + E+AV +A+ G+ AQ L + G+GV
Sbjct: 411 AEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKAAGQGYALAQNNLGIMYEEGKGVPQ 470
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY +AAE GY A N L Y G+G+ +QA W ++AA+ G+ + Q
Sbjct: 471 DDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVLQDDKQAVSWYRKAAEQGYARGQTNL 530
Query: 271 GLGLFTEG 278
G ++ EG
Sbjct: 531 GW-MYEEG 537
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G ++ G+GV ++ ++A+ + K A +G + G MY E E A+S YR+A
Sbjct: 387 GWMYEEGKGVPQDDEQAVSWYRKAAEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKA 446
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ P + +AV +A+ G+ AQ L L G+GV
Sbjct: 447 AGQGYALAQNNLGIMYEEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVLQ 506
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AAE GY R N Y G G+P ++QA W ++AA+ Q+
Sbjct: 507 DDKQAVSWYRKAAEQGYARGQTNLGWMYEEGRGVPQDNKQAVSWYRKAAEKDDATGQVYL 566
Query: 271 GLGLFTEG 278
G ++ EG
Sbjct: 567 GW-MYEEG 573
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 78 LPQLRAASLVCKSW--NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
+PQ A +L SW A + V L W +++G+GV ++ +A+ + K A +G
Sbjct: 288 VPQDDAQAL---SWYRKAAEQGYANGQVNLGW--MYRNGKGVPQDDAQAVSWYRKAALQG 342
Query: 136 STLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAAQ-------------PANAEE 178
S + G MY + + +A A+ YR+AA G A+ P + E+
Sbjct: 343 SARGQTNLGWMYRNGKGVPQDDAQAVYWYRKAADQGYARAESNLGWMYEEGKGVPQDDEQ 402
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AV +A+ G R Q L G+GV + ++A WY +AA GY A N + Y
Sbjct: 403 AVSWYRKAAEQGDERGQANLGWMYKEGKGVPQDYEQAVSWYRKAAGQGYALAQNNLGIMY 462
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
G+G+P QA W K+AA+ G+ AQ GL ++ EG
Sbjct: 463 EEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGL-MYEEG 501
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+G+ + KA+ + K + +G LA + G MY +K E
Sbjct: 99 GSMYDGGKGIPLDDTKAVYWYGKASEQGDALAQSNLGAMY---EKGEGV----------- 144
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + AV +++ GH R Q L G+GV + +A WY +AAE GY
Sbjct: 145 -----PQDDTRAVYWYKKSAGQGHSRGQNNLGWMYEDGKGVSQDDTQAVYWYRKAAEQGY 199
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKA 283
+A N Y G G+P +QA W ++AA+ +AQ G +G + +A
Sbjct: 200 AKAQTNLGWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTNLGWMYEMGRGAPQDDTQA 259
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
V + A G A++ V+ ++ +D A + SW
Sbjct: 260 VFWYRKAADQGYARAENNLGVMYEEGKGVPQDDAQAL--SW 298
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV ++ +A+ + K A +G + + G MY + A+ YR+A
Sbjct: 135 GAMYEKGEGVPQDDTRAVYWYKKSAGQGHSRGQNNLGWMYEDGKGVSQDDTQAVYWYRKA 194
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ P + ++AV +A+ RAQ L GRG
Sbjct: 195 AEQGYAKAQTNLGWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTNLGWMYEMGRGAPQ 254
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY +AA+ GY RA N + Y G+G+P QA W ++AA+ G+ Q+
Sbjct: 255 DDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVPQDDAQALSWYRKAAEQGYANGQVNL 314
Query: 271 G 271
G
Sbjct: 315 G 315
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G A + G MY D K+A +S YR+
Sbjct: 171 GWMYEDGKGVSQDDTQAVYWYRKAAEQGYAKAQTNLGWMYKVGRGVPQDDKQA-VSWYRK 229
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AQ P + +AV +A+ G+ RA+ L + G+GV
Sbjct: 230 AAEQEFARAQTNLGWMYEMGRGAPQDDTQAVFWYRKAADQGYARAENNLGVMYEEGKGVP 289
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY +AAE GY N Y G+G+P QA W ++AA G + Q
Sbjct: 290 QDDAQALSWYRKAAEQGYANGQVNLGWMYRNGKGVPQDDAQAVSWYRKAALQGSARGQTN 349
Query: 270 HG 271
G
Sbjct: 350 LG 351
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +A+ + K A +G LA + GLMY E + + A+S YR+A
Sbjct: 459 GIMYEEGKGVPQDDIQAVSWYKKAAEQGYALAQNNLGLMYEEGKGVLQDDKQAVSWYRKA 518
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G Q P + ++AV +A+ Q L G+GV
Sbjct: 519 AEQGYARGQTNLGWMYEEGRGVPQDNKQAVSWYRKAAEKDDATGQVYLGWMYEEGKGVPR 578
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY ++AE G A + Y G+G+ ++QA W ++AA+ G Q
Sbjct: 579 DNKQAVSWYRKSAEQGDADAQNSLGFMYEEGKGVLQDYKQAVSWYRKAAEQGSALGQSNL 638
Query: 271 GLGLFTEG 278
G ++ EG
Sbjct: 639 GR-MYKEG 645
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G +K GRGV ++ +A+ + K A + A + G MY EM + A+ YR+
Sbjct: 207 GWMYKVGRGVPQDDKQAVSWYRKAAEQEFARAQTNLGWMY-EMGRGAPQDDTQAVFWYRK 265
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G A+ P + +A+ +A+ G+ Q L G+GV
Sbjct: 266 AADQGYARAENNLGVMYEEGKGVPQDDAQALSWYRKAAEQGYANGQVNLGWMYRNGKGVP 325
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY +AA G R N Y G+G+P QA W ++AAD G+ +A E
Sbjct: 326 QDDAQAVSWYRKAALQGSARGQTNLGWMYRNGKGVPQDDAQAVYWYRKAADQGYARA--E 383
Query: 270 HGLG-LFTEG 278
LG ++ EG
Sbjct: 384 SNLGWMYEEG 393
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G + G MY E D K+A +S YR+
Sbjct: 495 GLMYEEGKGVLQDDKQAVSWYRKAAEQGYARGQTNLGWMYEEGRGVPQDNKQA-VSWYRK 553
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA D Q P + ++AV +++ G AQ L G+GV
Sbjct: 554 AAEKDDATGQVYLGWMYEEGKGVPRDNKQAVSWYRKSAEQGDADAQNSLGFMYEEGKGVL 613
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ ++A WY +AAE G N Y G+G+P Q+ W ++A+ G Q
Sbjct: 614 QDYKQAVSWYRKAAEQGSALGQSNLGRMYKEGKGVPRDDTQSIYWYQKASKHEDGYTQ 671
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAA 171
K GRG ++ KA+ + K A +G A V+ G MY E +
Sbjct: 31 KSGRGGPQDDTKAVYWYRKAAEQGYARAQVNLGWMY------EGGKGV------------ 72
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P + +AV +A+ + R Q L G+G+ + +A WY +A+E G A
Sbjct: 73 -PQDDTQAVYWYRKAAEQEYARGQNNLGSMYDGGKGIPLDDTKAVYWYGKASEQGDALAQ 131
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
N Y GEG+P +A W K++A GH + Q + LG E
Sbjct: 132 SNLGAMYEKGEGVPQDDTRAVYWYKKSAGQGHSRGQ--NNLGWMYE 175
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AV +A+ G+ RAQ L GRG + +A WY +AAE GY RA N Y
Sbjct: 7 AVYWYAKAAEQGYARAQTNLGWMHKSGRGGPQDDTKAVYWYRKAAEQGYARAQVNLGWMY 66
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLELATR 292
G+G+P QA W ++AA+ + + Q + LG +G + KAV + A+
Sbjct: 67 EGGKGVPQDDTQAVYWYRKAAEQEYARGQ--NNLGSMYDGGKGIPLDDTKAVYWYGKASE 124
Query: 293 AGETAA 298
G+ A
Sbjct: 125 QGDALA 130
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + +AV +A+ G+ RAQ L G+GV + +A WY +AAE Y R
Sbjct: 37 PQDDTKAVYWYRKAAEQGYARAQVNLGWMYEGGKGVPQDDTQAVYWYRKAAEQEYARGQN 96
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
N Y G+G+PL +A W +A++ G AQ G ++ +GE
Sbjct: 97 NLGSMYDGGKGIPLDDTKAVYWYGKASEQGDALAQSNLG-AMYEKGE 142
>gi|432947310|ref|XP_004083982.1| PREDICTED: protein sel-1 homolog 1-like [Oryzias latipes]
Length = 796
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F + A G+T AM G MY E E A+ +++A+ LG+
Sbjct: 368 GRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSEGSAFLPQNNETALQYFKKASDLGN 427
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 428 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 487
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++ G++ A YN + ++ G G+ S A + K + G +L F
Sbjct: 488 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYSSF 547
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
EG+ A+V YL LA + E A +V ++ Q+
Sbjct: 548 KEGDAESALVQYLLLAEQGYEVAQSNVAFLLEQK 581
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ LA + G YW E+A++ YR
Sbjct: 243 GFLYAAGLGVNSSQAKALVYYTFGALGGNLLAHMILGYRYWAGVGVPQSCESALTHYRLV 302
Query: 164 A--VLGDPAAQPANAEEAVKLL-------------------YQASIA--GHVRAQYQLA- 199
A V D + +A + ++LL Y +A G V+AQ L
Sbjct: 303 ANQVANDVSLTGGSAVQRIRLLDEVENPGSTSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 362
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G LP ++ A ++ K+A
Sbjct: 363 LHLHGGRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSEGSAFLPQNNETALQYFKKA 422
Query: 259 ADCGHGKAQLEHGLGL 274
+D G+ Q GLG+
Sbjct: 423 SDLGNPVGQ--SGLGM 436
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 97/260 (37%), Gaps = 72/260 (27%)
Query: 78 LPQLRAASL-VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGS 136
LPQ +L K +D P+ ++ + G + +GRGV N + AL F K A +G
Sbjct: 408 LPQNNETALQYFKKASDLGNPVGQSGL----GMAYLYGRGVPVNYELALKYFQKAAEQGW 463
Query: 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQY 196
+ G MY+ I + R + ++A+K AS AGH+ A Y
Sbjct: 464 VDGQLQLGTMYYN------GIGVKR-------------DYKQALKFFNLASQAGHILAFY 504
Query: 197 QLALCLHRGRGV----------DFNLQEAARW----------------------YLRAAE 224
LA G GV N+ E RW YL AE
Sbjct: 505 NLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYSSFKEGDAESALVQYLLLAE 564
Query: 225 GGYVRAMYNTSLC--------YSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGL 272
GY A N + +S E P R W RAA G+ A+++ H
Sbjct: 565 QGYEVAQSNVAFLLEQKGAKMFSENETYP---RALLHW-TRAAAQGYTVARIKLGDYHFY 620
Query: 273 GLFTEGEMMKAVVYLELATR 292
G T+ + AV++ LA+
Sbjct: 621 GFGTDVDYETAVIHYRLASE 640
>gi|168335202|ref|ZP_02693307.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 376
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV KNL+KA++ F K A + A + G+ Y
Sbjct: 231 GICYFYGRGVVKNLEKAIEWFAKAAEKEYVPAQNNLGICY-------------------- 270
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
++ + AVK +A+ ++ AQ+ L +C G G + +L EA +W +AA+ G+
Sbjct: 271 GTESECRDLSAAVKWYTKAAEKDYMEAQFSLGMCYKYGEGTEVDLLEAFKWLKKAADKGH 330
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A +N CY FGEG+ + +A W +AA+ GH +AQ+ L
Sbjct: 331 GDAQFNLGWCYEFGEGVTKNIAEAANWYAKAAEQGHERAQINLNL 375
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLYRQA 163
++ G GV ++ +KA + K A +G LA + + Y +MD+ AI L +A
Sbjct: 90 YEQGVGVERSPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIADMDQ---AIKLLTEA 146
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + + AVK A+ G V AQ L G GV
Sbjct: 147 AEKGNSTAQSNLGLHYEKGKGVRQDCDIAVKWYKLAAEQGDVFAQTNLGYLYATGMGVKL 206
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+L+E+A+WY +AAE G RA + +CY +G G+ + +A +W +AA+ + AQ
Sbjct: 207 DLEESAKWYTKAAEKGSPRAQNSIGICYFYGRGVVKNLEKAIEWFAKAAEKEYVPAQNNL 266
Query: 271 GLGLFTEGEMMKAVVYLELATRAGE 295
G+ TE E ++ T+A E
Sbjct: 267 GICYGTESECRDLSAAVKWYTKAAE 291
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AV GD AQ N +EAVK ++ H AQ LA C +G GV+
Sbjct: 39 AVEGDAEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNSLAACYEQGVGVER 98
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A + Y +AAE GY+ A N ++CY G G+ QA K + AA+ G+ AQ
Sbjct: 99 SPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIADMDQAIKLLTEAAEKGNSTAQSNL 158
Query: 271 GLGLFTEGEMMK-----AVVYLELATRAGETAA 298
GL + +G+ ++ AV + +LA G+ A
Sbjct: 159 GL-HYEKGKGVRQDCDIAVKWYKLAAEQGDVFA 190
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
++ ++ G AQY++ +C G+GV+ N++EA +WY +A + A + + CY G G
Sbjct: 36 FELAVEGDAEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNSLAACYEQGVG 95
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETA 297
+ S +A + +AA+ G+ AQ E G G+ +M +A+ L A G +
Sbjct: 96 VERSPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIA--DMDQAIKLLTEAAEKGNST 153
Query: 298 A 298
A
Sbjct: 154 A 154
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G +K G+GV KN+ +A+ + A + +A Y E + + R
Sbjct: 49 RIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNSLAACY------EQGVGVER---- 98
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+ E+A +L +A+ G++ AQ LA+C RG G+ ++ +A + AAE
Sbjct: 99 ---------SPEKAFQLYNKAAEQGYLLAQNNLAMCYERGTGIIADMDQAIKLLTEAAEK 149
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
G A N L Y G+G+ A KW K AA+ G AQ G L+ G M +
Sbjct: 150 GNSTAQSNLGLHYEKGKGVRQDCDIAVKWYKLAAEQGDVFAQTNLGY-LYATG--MGVKL 206
Query: 286 YLELA----TRAGETAADHVKNVI 305
LE + T+A E + +N I
Sbjct: 207 DLEESAKWYTKAAEKGSPRAQNSI 230
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
F +E RW+ A EG A Y +CY G+G+ + ++A KW +A+ H AQ
Sbjct: 27 FMNEEERRWFELAVEGD-AEAQYRIGVCYKLGKGVEKNIKEAVKWYTMSANQEHAMAQNS 85
Query: 268 ----LEHGLGL 274
E G+G+
Sbjct: 86 LAACYEQGVGV 96
>gi|163800487|ref|ZP_02194388.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
gi|159175930|gb|EDP60724.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
Length = 993
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----- 152
L +A + G +K+G GV ++ +A+ + K A +G T+A + G MY E K
Sbjct: 38 LGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGWMY-EAGKGVSQD 96
Query: 153 KEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA 199
A+ YR+AA G P AQ P + +A+ +A+ + RAQ +L
Sbjct: 97 DAQAVYWYRKAAEQGYPKAQTNLGWMYEYGEGVPKDDTQALYWYRKAAEQEYARAQNRLG 156
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
G+GV + +A WY +AAE GY RA N Y GEG+P +A W K++A
Sbjct: 157 RMYDMGKGVPLDDTQAVYWYGKAAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSA 216
Query: 260 DCGHGKAQLEHG 271
D G+ Q G
Sbjct: 217 DQGYVTGQTNLG 228
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ GRGV ++ +A+ + K A +G + G MY + D K+A +S YR+
Sbjct: 372 GWMYREGRGVPQDNKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVPQDDKQA-VSWYRK 430
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ P + ++AV +A+ G+ R Q L G+GV
Sbjct: 431 AAEQGDDTAQNNLGWMYEEGKGVPQDYKQAVYWYRKAAEQGYARGQTNLGWMYEEGKGVP 490
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY +AAE G N Y G+G+P +QA W ++AA+ G+ + Q
Sbjct: 491 QDDVQAVSWYRKAAEQGLATGQANLGWMYREGKGVPQDDKQAVSWYRKAAEQGYARGQTN 550
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G ++ +G+ + +AV + A G+ A + + ++ +D V SW
Sbjct: 551 LGW-MYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVPQDNKQAV--SW 607
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ F K A +G + G MY E D +A +S YR+
Sbjct: 300 GWMYEEGKGVPQDDIQAVFLFRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQA-VSWYRK 358
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG Q P + ++AV +A+ G+ R Q L +G+GV
Sbjct: 359 AAELGFATGQANLGWMYREGRGVPQDNKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVP 418
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AAE G A N Y G+G+P ++QA W ++AA+ G+ + Q
Sbjct: 419 QDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVPQDYKQAVYWYRKAAEQGYARGQTN 478
Query: 270 HGLGLFTEGE 279
G ++ EG+
Sbjct: 479 LGW-MYEEGK 487
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 27/227 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G + G MY + D K+A +S YR+
Sbjct: 516 GWMYREGKGVPQDDKQAVSWYRKAAEQGYARGQTNLGWMYEKGKGVPQDDKQA-VSWYRK 574
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ P + ++AV +A+ G V Q L +G+GV
Sbjct: 575 AAEQGDDTAQNNLGWMYEEGKGVPQDNKQAVSWYRKAAEQGSVIGQVNLGWMYEQGKGVP 634
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AA+ G A + Y G+G+ ++QA W ++AA+ GH Q
Sbjct: 635 QDNKQAVSWYQKAADQGDADAQNSLGSMYEEGKGVLQDYKQAVSWYRKAAEQGHELGQSN 694
Query: 270 HGLGLFTEG-----EMMKAVVYLELATR--AGETAADHVKNVILQQL 309
G ++TEG + +A+ + + A++ T +D + + ++ +L
Sbjct: 695 LGK-MYTEGKGVPRDATQAIYWYQKASKLEHSHTQSDAIYDNVINEL 740
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A +G + G MY E D K+A +S YR+
Sbjct: 480 GWMYEEGKGVPQDDVQAVSWYRKAAEQGLATGQANLGWMYREGKGVPQDDKQA-VSWYRK 538
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G Q P + ++AV +A+ G AQ L G+GV
Sbjct: 539 AAEQGYARGQTNLGWMYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVP 598
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AAE G V N Y G+G+P ++QA W ++AAD G AQ
Sbjct: 599 QDNKQAVSWYRKAAEQGSVIGQVNLGWMYEQGKGVPQDNKQAVSWYQKAADQGDADAQNS 658
Query: 270 HGLGLFTEGE 279
G ++ EG+
Sbjct: 659 LG-SMYEEGK 667
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A+ + K A G + G MY E D K+A +S YR+
Sbjct: 336 GWMYEEGKGVPQDDVQAVSWYRKAAELGFATGQANLGWMYREGRGVPQDNKQA-VSWYRK 394
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G Q P + ++AV +A+ G AQ L G+GV
Sbjct: 395 AAEQGYARGQTNLGWMYEKGKGVPQDDKQAVSWYRKAAEQGDDTAQNNLGWMYEEGKGVP 454
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AAE GY R N Y G+G+P QA W ++AA+ G Q
Sbjct: 455 QDYKQAVYWYRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKAAEQGLATGQAN 514
Query: 270 HGLGLFTEGE 279
G ++ EG+
Sbjct: 515 LGW-MYREGK 523
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G ++ G GV +++ +A+ + K A +G + G MY E K A+S YR+
Sbjct: 192 GTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTNLGWMY-EKGKGVPKDDTQAVSWYRK 250
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ P + +AV +A + RAQ L G+GV
Sbjct: 251 AAKQGYARAQTNLGWMYEKGKGVPQDNMQAVDWYRKAVKQDYARAQSYLGWMYEEGKGVP 310
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A + +AAE GY R N Y G+G+P QA W ++AA+ G Q
Sbjct: 311 QDDIQAVFLFRKAAEQGYARGQTNLGWMYEEGKGVPQDDVQAVSWYRKAAELGFATGQAN 370
Query: 270 HGLGLFTEG 278
G ++ EG
Sbjct: 371 LGW-MYREG 378
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 154 EAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLAL 200
E S Y Q A LGD AQ + +AV +A+ GH AQ L
Sbjct: 26 EVKNSNYFQNAELGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGW 85
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G+GV + +A WY +AAE GY +A N Y +GEG+P QA W ++AA+
Sbjct: 86 MYEAGKGVSQDDAQAVYWYRKAAEQGYPKAQTNLGWMYEYGEGVPKDDTQALYWYRKAAE 145
Query: 261 CGHGKAQ 267
+ +AQ
Sbjct: 146 QEYARAQ 152
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G +++G GV K+ +AL + K A + A G MY +M K A+ Y +
Sbjct: 120 GWMYEYGEGVPKDDTQALYWYRKAAEQEYARAQNRLGRMY-DMGKGVPLDDTQAVYWYGK 178
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ P + AV +++ G+V Q L +G+GV
Sbjct: 179 AAEQGYERAQNNLGTMYEEGEGVPQDMTRAVYWYKKSADQGYVTGQTNLGWMYEKGKGVP 238
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY +AA+ GY RA N Y G+G+P + QA W ++A + +AQ
Sbjct: 239 KDDTQAVSWYRKAAKQGYARAQTNLGWMYEKGKGVPQDNMQAVDWYRKAVKQDYARAQSY 298
Query: 270 HGLGLFTEGE 279
G ++ EG+
Sbjct: 299 LGW-MYEEGK 307
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+Q + G +AQ +L G GV + +A WY +AAE G+ A N Y G+
Sbjct: 32 YFQNAELGDAKAQNKLGNIYKNGDGVVQDHSQAVYWYTKAAEQGHTIAQTNLGWMYEAGK 91
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G+ QA W ++AA+ G+ KAQ G ++ GE
Sbjct: 92 GVSQDDAQAVYWYRKAAEQGYPKAQTNLGW-MYEYGE 127
>gi|153873300|ref|ZP_02001926.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152070234|gb|EDN68074.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 566
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQ------- 172
++S + A G A G +Y+ D KEAA YR+ A G AQ
Sbjct: 27 IESLQQAAEEGDIAAQFQLGTIYYTGQDVPHDLKEAA-KWYRKVAEQGFATAQHNLGIMY 85
Query: 173 ------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
P + E A +A+ G R+Q L +G+G+ N +EA +WY +AAE G
Sbjct: 86 SRGEGVPQDHEIAFGWYRKAAEQGDSRSQNNLGNLYRKGQGIPKNDKEAVKWYRKAAEQG 145
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
Y A YN + Y+ GEG+ QA KW ++AAD G+ +AQ E LG F E + A
Sbjct: 146 YAVAQYNLGVAYNRGEGIFKDKNQAIKWYRKAADQGYVEAQRE--LGYFQETPVTVA 200
>gi|327259288|ref|XP_003214470.1| PREDICTED: protein sel-1 homolog 1-like [Anolis carolinensis]
Length = 860
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 455 GRGVEQNHQRAFEYFSQAAGAGNSHAMAFLGKMYSEGSDIVPQNNETALQYFKKAADMGN 514
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 515 PVGQSGLGMAYLYGKGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 574
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L + +
Sbjct: 575 YKYFNMASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMNAYNSY 634
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 635 KDGDTNSAVVQYLLLAEQGYEVAQSNAAFILDQK 668
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 330 GFLYASGLGVDSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 389
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 390 ANHVASDISLTGGTVVQRIRLPDEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 449
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + P ++ A ++ K+A
Sbjct: 450 LHLHGGRGVEQNHQRAFEYFSQAAGAGNSHAMAFLGKMYSEGSDIVPQNNETALQYFKKA 509
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 510 ADMGNPVGQ--SGLGM 523
>gi|365844596|ref|ZP_09385432.1| Sel1 repeat protein [Flavonifractor plautii ATCC 29863]
gi|364564074|gb|EHM41849.1| Sel1 repeat protein [Flavonifractor plautii ATCC 29863]
Length = 1056
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 103/231 (44%), Gaps = 21/231 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ +G GV ++ A+ K AA+G+ A G + + + E A LY QAA
Sbjct: 709 YLNGNGVERDAAAAVRWLEKAAAQGNARAQSILGDLCRDGEGTEMDAARAFQLYTQAAEQ 768
Query: 167 GDPAAQPA----------NAEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G P AQ A AE+ AV+ +A+ GH AQ LA C +G GV +
Sbjct: 769 GYPPAQCALGYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDKT 828
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
+A WY RAAE + RAM N LCY +GEG+ +A +W ++AA G+ AQ G
Sbjct: 829 KAVEWYARAAEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFF 888
Query: 273 ---GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ + KAV + E A G A + D+A V
Sbjct: 889 YDRGVGVAEDAAKAVEWYERAAEQGYPRAQCNLGYCYESGKGVKEDKARAV 939
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GRGV ++ +KAL + + AA G A+ GL Y D K A+ Y +A
Sbjct: 418 GDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYETGDGVAEDKAQAVEWYTRA 477
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ A E+A+ L +A+ G RAQ L C G GV+
Sbjct: 478 AEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQARAQSLLGGCYRDGDGVEA 537
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA WY +AA+ Y AM + L + GEGL +A W +AA G+ A
Sbjct: 538 DAAQAAEWYGKAAKQNYPPAMCSLGLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNL 597
Query: 271 GLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
+ L E +AV +LE A A + +L + D+A V
Sbjct: 598 AVCLLNGTGAERSAEEAVGWLEKAVEQEFPRAQGILGDLLLTGNGVPEDKARAV 651
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 28/177 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G GV +++ +A+ F K GS A G Y + KE A+SLYR++A
Sbjct: 385 YLNGIGVEEDMAQAVAWFQKAVEGGSARAKSILGDFYLDGRGVEQDKEKALSLYRESAA- 443
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G++ A L LC G GV + +A WY RAAEGG
Sbjct: 444 ----------------------DGYLPAICSLGLCYETGDGVAEDKAQAVEWYTRAAEGG 481
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
Y A N + C+ G G+ + +A W+++AA+ G +AQ G G + +G+ ++A
Sbjct: 482 YAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQARAQSLLG-GCYRDGDGVEA 537
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAA------ 156
G F+ G G+ ++ KA+ + K A G AM + + E +EA
Sbjct: 562 GLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNLAVCLLNGTGAERSAEEAVGWLEKA 621
Query: 157 --ISLYRQAAVLGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
R +LGD P + AV+L A+ G+V A L LC G GV+
Sbjct: 622 VEQEFPRAQGILGDLLLTGNGVPEDKARAVELYRAAAKGGYVPAMCDLGLCYENGDGVEE 681
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+L+ A WY ++AE GY N ++CY G G+ A +W+++AA G+ +AQ
Sbjct: 682 DLRHAVLWYRKSAEEGYAPGQCNLAVCYLNGNGVERDAAAAVRWLEKAAAQGNARAQSIL 741
Query: 271 G-LGLFTEGEMMKAVVYLELATRAGETA---ADHVKNVILQQLSATSRDRAMLV 320
G L EG M A +L T+A E A + S T+ D+ V
Sbjct: 742 GDLCRDGEGTEMDAARAFQLYTQAAEQGYPPAQCALGYCYEVGSGTAEDKTKAV 795
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 18/186 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAIS 158
+ G +++G GV ++ KA + + K A RG A + G Y + A+
Sbjct: 845 AMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAEDAAKAVE 904
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y +AA G P AQ + AVKL QA+ G Q L C+ +G
Sbjct: 905 WYERAAEQGYPRAQCNLGYCYESGKGVKEDKARAVKLYRQAAEQGSSVGQCNLGYCMLKG 964
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-HG 264
G+ + +A W+ +AAEGG RAM CY G+G+ QAR ++A D G
Sbjct: 965 IGIRPDPAQAVYWFRKAAEGGSGRAMCLLGDCYREGQGVEADAAQARTCYQKAIDLGFDA 1024
Query: 265 KAQLEH 270
K +LE
Sbjct: 1025 KEELEE 1030
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AIS 158
L G ++HG GV ++ KA++ + K A + A + G++ EA A
Sbjct: 233 ALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADPAAAAE 292
Query: 159 LYRQAA---------VLGDP-------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+R+AA +LGD A PA A E L QA+ G+ A L LC
Sbjct: 293 WFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAE---LYRQAADQGYAPALCDLGLCY 349
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GV + +AA Y +AAE Y AM N ++CY G G+ QA W ++A + G
Sbjct: 350 ENANGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQAVAWFQKAVEGG 409
Query: 263 HGKAQ 267
+A+
Sbjct: 410 SARAK 414
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G ++ KA++ + K A RG A + Y + + K A+ Y +A
Sbjct: 778 GYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDKTKAVEWYARA 837
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P A + +A + +A+ G+ AQ L RG GV
Sbjct: 838 AEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAE 897
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY RAAE GY RA N CY G+G+ +A K ++AA+ G Q
Sbjct: 898 DAAKAVEWYERAAEQGYPRAQCNLGYCYESGKGVKEDKARAVKLYRQAAEQGSSVGQCNL 957
Query: 271 GL----GLFTEGEMMKAVVYLELATRAG 294
G G+ + +AV + A G
Sbjct: 958 GYCMLKGIGIRPDPAQAVYWFRKAAEGG 985
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G+ ++ G GV K+ +A + F + A + A D GL Y ++K EA A Y QA
Sbjct: 94 GRCYQSGAGVEKDEARAAELFQQAAEQDYAPAQCDLGLSYENGSGVEKDEARAAECYLQA 153
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A AQ + E A + L +A+ RA L C G GV+
Sbjct: 154 AEQDYAPAQTNLAVCYFNGIGVDKDVECAHQWLEKAAEQKFPRALNILGDCHWDGTGVEQ 213
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EAAR Y +AAE Y A+ N LCY G+G+ +A + ++AA+ + AQ
Sbjct: 214 DRGEAARLYRQAAEQDYPPALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNL 273
Query: 271 GL----GLFTEGEMMKAVVYL 287
G+ G+ TE + A +
Sbjct: 274 GVLTLHGVGTEADPAAAAEWF 294
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK----------KE 154
G +++G GV K+ +A + +L+ A + A + + Y+ +DK K
Sbjct: 130 GLSYENGSGVEKDEARAAECYLQAAEQDYAPAQTNLAVCYFNGIGVDKDVECAHQWLEKA 189
Query: 155 AAISLYRQAAVLGDPAAQPANAE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A R +LGD E EA +L QA+ + A L LC G GV+
Sbjct: 190 AEQKFPRALNILGDCHWDGTGVEQDRGEAARLYRQAAEQDYPPALCNLGLCYEHGDGVEQ 249
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ +A Y +AAE Y A N + G G A +W +RAA+ +AQ
Sbjct: 250 DKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADPAAAAEWFRRAAEQSFARAQ 306
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ +G GV K+++ A K A + A+ G +W E D+ EAA LYRQAA
Sbjct: 169 YFNGIGVDKDVECAHQWLEKAAEQKFPRALNILGDCHWDGTGVEQDRGEAA-RLYRQAAE 227
Query: 166 LGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
P A + +AV+ +A+ + AQ L + G G + +
Sbjct: 228 QDYPPALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADP 287
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
AA W+ RAAE + RA CY G+G+ +A + ++AAD G+ A + GL
Sbjct: 288 AAAAEWFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAELYRQAADQGYAPALCDLGL 347
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EE LL QA G Y L + G G D + +AARW+ A+E G +RA
Sbjct: 37 EEFQTLLEQAE-GGDASVYYDLGVRYTEGDGTDKDPAQAARWFALASEDGDLRATDLLGR 95
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
CY G G+ +A + ++AA+ + AQ + GL
Sbjct: 96 CYQSGAGVEKDEARAAELFQQAAEQDYAPAQCDLGL 131
>gi|229847119|ref|ZP_04467224.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae 7P49H1]
gi|229809948|gb|EEP45669.1| Sel1 domain protein repeat-containing protein [Haemophilus
influenzae 7P49H1]
Length = 384
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 161 GNMYYKGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 219
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EAVK +A+ GH +AQY L GRGV
Sbjct: 220 AAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVK 279
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +AAE GY A N YS G G+ + +A KW K+AA+ G Q +
Sbjct: 280 QDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQDYIEAVKWFKKAAENGSADGQFK 339
Query: 270 HGL 272
GL
Sbjct: 340 LGL 342
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----W 148
PL E A + G +K G+G++++ +A+ F K A +G A ++ G MY
Sbjct: 39 PLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQGVADAQLNLGNMYAKGLGV 98
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
+ D EA + YRQAA G+ AQ + EAVK +A+ G+ AQ
Sbjct: 99 KQDDVEA-VKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYADAQ 157
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L ++G GV + EA +WY +AAE GY A +N Y G G+ +A KW
Sbjct: 158 FNLGNMYYKGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWY 217
Query: 256 KRAADCGHGKAQLEHGLGLFTEGEMMK 282
++AA+ G+ AQ G ++ G +K
Sbjct: 218 RKAAEQGYADAQFNLG-NMYYNGHGVK 243
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV+++ +A+ + K A +G A + G MY+ + D EA + YR+
Sbjct: 197 GNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEA-VKWYRK 255
Query: 163 AAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ AN EAVK +A+ G+ AQ L G GV
Sbjct: 256 AAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVR 315
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ EA +W+ +AAE G + L Y G+G+ A++W+ +A D G+
Sbjct: 316 QDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGN 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + + + A KL + G+ Q+ L L +G+G+ + EA +W+ +AAE G
Sbjct: 21 GLEATKRGDYQTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWFRKAAEQG 80
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A N Y+ G G+ +A KW ++AA+ G+ KAQ GL ++ G +K
Sbjct: 81 VADAQLNLGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGL-MYDNGRGVK 135
>gi|384411626|ref|YP_005620991.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932000|gb|AEH62540.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 234
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
R GR V+ D K A RG A G Y + E A+S Y+++A
Sbjct: 16 RIGVGRVVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSAS 75
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G AQ P + ++AV +A+ G+ AQY L + G+GV +
Sbjct: 76 QGYAPAQAALGYAYSSGLGVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVPHSD 135
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+EAA WY RAA GY A +N Y GEG+ + QA W ++AA+ G KAQ G+
Sbjct: 136 EEAASWYQRAAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGV 195
Query: 273 GLFTEGEMMK----AVVYLELATRAGETAADHV 301
T + K A+++++ A G+ A +
Sbjct: 196 AYITGRGVTKSRDNALIWIQKAADQGDVTAQKI 228
>gi|237745488|ref|ZP_04575968.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229376839|gb|EEO26930.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 350
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 25/227 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G +++G V+K++++ L + A RG A G+MY+E + E A Y +A
Sbjct: 128 GILYQNGLVVKKDVERGLQLITRSANRGFARAQNYLGVMYYEGNGVEPNSDRAFEWYGKA 187
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AV P A+ + EA+K L +A++ AQY L + RG GV+
Sbjct: 188 AVQNYPDAEYNLGVMYALGKGTRQDFGEALKWLRKAAMHQLPEAQYGLGVMYARGLGVEK 247
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N +++A W+ +AA+ GY++A + Y+ G G+P +A +W RAA+ G+ KAQ
Sbjct: 248 NPEQSAYWFGKAAKQGYLKAQNKMGVLYTEGTGVPRDEAKAFRWFTRAAEKGYAKAQYNL 307
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 313
G+ G T + KA+ + A G AD K L+ L ATS
Sbjct: 308 GILYENGKGTNADKTKAIGWFRKAAAQGN--ADAQKR--LKTLKATS 350
>gi|440226926|ref|YP_007334017.1| Sel1 repeat family [Rhizobium tropici CIAT 899]
gi|440038437|gb|AGB71471.1| Sel1 repeat family [Rhizobium tropici CIAT 899]
Length = 356
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 88 CKSWNDALRPL---REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
KS D RPL A L+ G+ ++ G GV+KNL AL + K A +G+ +A + G
Sbjct: 34 IKSGLDYWRPLANKGNAAAQLKLGQMYEEGNGVKKNLTLALGWYKKAADQGNAVAQFNVG 93
Query: 145 LMYWEMD----KKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQAS 187
MY + + K AI+ Y+++A G AQ + +A +A+
Sbjct: 94 TMYDQGEGVTADKGQAIAWYKKSAAQGYLNAQYNLGVVYDTGQGVAQDKPQAFAWYSKAA 153
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G AQ+ + +G G + A WY +AAE G V A YN + Y GEG+
Sbjct: 154 EQGDTDAQFNVGTMYDQGDGTGKDKTMAVIWYRKAAEQGKVEAQYNLGIMYRDGEGVAKD 213
Query: 248 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A W K+AAD G AQ G ++ +G+ +K
Sbjct: 214 SAAAFSWFKKAADQGDVSAQFNIGA-MYADGDGIK 247
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G G K+ A+ + K A +G A + G+MY + + AA S +++A
Sbjct: 165 GTMYDQGDGTGKDKTMAVIWYRKAAEQGKVEAQYNLGIMYRDGEGVAKDSAAAFSWFKKA 224
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD +AQ + EA+ +A+ V A+Y L + G GV
Sbjct: 225 ADQGDVSAQFNIGAMYADGDGIKQDQAEAIAWFLKAAAQNDVEAEYNLGVMFRDGEGVAK 284
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N A W+ RAAE Y A YN ++ Y G+G+ +A +W ++A G+
Sbjct: 285 NGHRAVYWFERAAEHRYAGAAYNLAMMYRDGDGVTADAGKAAEWFRKAKHLGY 337
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
R ++ LD + A +G+ A + G MY E + + ++L
Sbjct: 31 RGDIKSGLDYWRPLANKGNAAAQLKLGQMYEEGNGVKKNLTL------------------ 72
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
A+ +A+ G+ AQ+ + +G GV + +A WY ++A GY+ A YN +
Sbjct: 73 -ALGWYKKAADQGNAVAQFNVGTMYDQGEGVTADKGQAIAWYKKSAAQGYLNAQYNLGVV 131
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATR 292
Y G+G+ QA W +AA+ G AQ G ++ +G+ AV++ A
Sbjct: 132 YDTGQGVAQDKPQAFAWYSKAAEQGDTDAQFNVGT-MYDQGDGTGKDKTMAVIWYRKAAE 190
Query: 293 AGETAADHVKNVILQQLSATSRDRA 317
G+ A + ++ + ++D A
Sbjct: 191 QGKVEAQYNLGIMYRDGEGVAKDSA 215
>gi|410630928|ref|ZP_11341612.1| hypothetical protein GARC_1506 [Glaciecola arctica BSs20135]
gi|410149437|dbj|GAC18479.1| hypothetical protein GARC_1506 [Glaciecola arctica BSs20135]
Length = 627
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVR 193
Y++ A+ Y+QAA LG+ +A+ N +A QA+ GH +
Sbjct: 450 YYQQQNYPEALYYYQQAAKLGNVSAEYLLGKMYENGQGTEQNMRQAANWYTQAAKHGHNQ 509
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L +G GVD + +AA WY +AAE G++ A YN + YS G+G+ +H+QA
Sbjct: 510 AQATLGFMYSKGNGVDQDYSQAAYWYQKAAEQGHMNAQYNLAYLYSLGQGIVKNHQQAAY 569
Query: 254 WMKRAADCGHGKAQ------LEHGLGL 274
W ++AA G AQ E GLG+
Sbjct: 570 WFEKAAIQGDADAQNSLGKLYERGLGV 596
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A+ D Q N EA+ QA+ G+V A+Y L G+G + N+++AA WY +AA
Sbjct: 444 ALADDYYYQQQNYPEALYYYQQAAKLGNVSAEYLLGKMYENGQGTEQNMRQAANWYTQAA 503
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGE 279
+ G+ +A YS G G+ + QA W ++AA+ GH AQ + LG
Sbjct: 504 KHGHNQAQATLGFMYSKGNGVDQDYSQAAYWYQKAAEQGHMNAQYNLAYLYSLGQGIVKN 563
Query: 280 MMKAVVYLELATRAGETAADH 300
+A + E A G+ A +
Sbjct: 564 HQQAAYWFEKAAIQGDADAQN 584
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK +++G+G +N+ +A + + + A G A G MY K Y QAA
Sbjct: 479 GKMYENGQGTEQNMRQAANWYTQAAKHGHNQAQATLGFMY---SKGNGVDQDYSQAAYWY 535
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA+ GH+ AQY LA G+G+ N Q+AA W+ +AA G
Sbjct: 536 QKAAE----------------QGHMNAQYNLAYLYSLGQGIVKNHQQAAYWFEKAAIQGD 579
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
A + Y G G+ +A++ ++AAD G+ A++
Sbjct: 580 ADAQNSLGKLYERGLGVSQDLAEAKRLYQQAADQGNQMAKI 620
>gi|384411624|ref|YP_005620989.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931998|gb|AEH62538.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 274
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQP--ANA----------- 176
G+ A D G Y+ D K+A IS Y++AA G P AQ NA
Sbjct: 45 GNPKAQTDLGTAYYNGQGMAQDYKQA-ISWYQKAANQGYPLAQYYLGNACLQGIGLTQSD 103
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+AV +A+ G AQY LA+ + GRGV N +A+ W+ R+A G+V A + +
Sbjct: 104 EQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGV 163
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y G G+P H +A W +AAD G+ AQ GL ++ EG+++K
Sbjct: 164 MYRNGAGIPEDHDRALFWFHKAADKGYADAQYNLGL-IYHEGKVVK 208
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
GRGV +N +A F + A +G A G+MY R A + P
Sbjct: 132 GRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMY-------------RNGAGI------P 172
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ + A+ ++A+ G+ AQY L L H G+ V + ++A WY +AA G V A +N
Sbjct: 173 EDHDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFN 232
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G+G+ +A W+++AAD G AQ
Sbjct: 233 LGIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQ 266
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ ++ +A+ + K A +G LA G + E A+S Y++A
Sbjct: 54 GTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKA 113
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + N +A +++ G V AQ+ L + G G+
Sbjct: 114 ANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPE 173
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A W+ +AA+ GY A YN L Y G+ + +QA W ++AA+ G +A+
Sbjct: 174 DHDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFNL 233
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHV 301
G+ G + + KA +LE A G++ A V
Sbjct: 234 GIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQDV 268
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L Q + AG+ +AQ L + G+G+ + ++A WY +AA GY A Y G
Sbjct: 38 LEQKARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGI 97
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
GL S QA W ++AA+ G +AQ + +T
Sbjct: 98 GLTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYT 131
>gi|348590324|ref|YP_004874786.1| hypothetical protein TASI_1004 [Taylorella asinigenitalis MCE3]
gi|347974228|gb|AEP36763.1| hypothetical protein TASI_1004 [Taylorella asinigenitalis MCE3]
Length = 342
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 95 LRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
L P+ E A G + G GV KN +++ + K AA+G A+ + G MY
Sbjct: 76 LGPIEERANKGDAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYL 135
Query: 149 ---EMDKK-EAAISLYRQAAVLGDPAA--------------QPANAEEAVKLLYQASIAG 190
+DK + A + +A+ G P A +P NA +A L A+ AG
Sbjct: 136 MGLGVDKDYKKAFENFEKASTKGFPEAIYNLGYMYQKGWGVEP-NATKARDLFETAATAG 194
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+V A + L LC GRG D + ++A +WY +AA G+V A N Y G+G+ + +
Sbjct: 195 NVSAMFNLGLCYQFGRGTDKDAKKAKQWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDE 254
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A +W K+AA AQ G L+ G+
Sbjct: 255 AMEWYKKAAQKNEPIAQYNVG-ALYENGK 282
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AIS 158
L G + G GV K+ KA ++F K + +G A+ + G MY W ++ A
Sbjct: 126 ALNNLGYMYLMGLGVDKDYKKAFENFEKASTKGFPEAIYNLGYMYQKGWGVEPNATKARD 185
Query: 159 LYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L+ AA G+ +A +A++A + +A+ AGHV AQ L +G
Sbjct: 186 LFETAATAGNVSAMFNLGLCYQFGRGTDKDAKKAKQWYEKAANAGHVLAQRNLGYLYEKG 245
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G+D + EA WY +AA+ A YN Y G+G + + A W + A D
Sbjct: 246 DGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYENGKGTTKNFKNATTWYQLACD 300
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G Q++L +G GV N ++ +WY ++A G+V A+ N Y G G+ ++
Sbjct: 86 GDAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYLMGLGVDKDYK 145
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A + ++A+ G +A G G E KA E A AG +A +
Sbjct: 146 KAFENFEKASTKGFPEAIYNLGYMYQKGWGVEPNATKARDLFETAATAGNVSAMFNLGLC 205
Query: 306 LQQLSATSRD 315
Q T +D
Sbjct: 206 YQFGRGTDKD 215
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAI 157
+ G ++ G GV N KA D F A G+ AM + GL Y + D K+A
Sbjct: 162 AIYNLGYMYQKGWGVEPNATKARDLFETAATAGNVSAMFNLGLCYQFGRGTDKDAKKAK- 220
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
Y +AA G AQ + +EA++ +A+ AQY +
Sbjct: 221 QWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYEN 280
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRA 230
G+G N + A WY A + + A
Sbjct: 281 GKGTTKNFKNATTWYQLACDNKFESA 306
>gi|422341261|ref|ZP_16422202.1| hypothetical protein HMPREF9353_00865 [Treponema denticola F0402]
gi|325474832|gb|EGC78018.1| hypothetical protein HMPREF9353_00865 [Treponema denticola F0402]
Length = 784
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 17/230 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G GV KN +KA + + K A +G+ A + G MY + E AI Y +A
Sbjct: 157 GNMYYDGNGVDKNYEKAFELYKKAAEQGNAYAQDNLGYMYENGEGVEKNTSEAIKWYTKA 216
Query: 164 AVLGDPAAQP------ANAEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A G AQ + EE A + A+ GH Q L + G GVD + ++
Sbjct: 217 ADQGVANAQNNLGWIYEDREEYNRAAAMYLMAAQQGHASGQNNLGRMYYNGYGVDKDYKQ 276
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-- 272
A WY +AAE G V A N Y G G+ ++ +A +W +AA+ G+ AQ G
Sbjct: 277 AFEWYTKAAEQGNVYAQSNLGGMYYDGYGVDKNYEKAFEWYTKAAEQGNVYAQYSLGFMY 336
Query: 273 --GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G T+ + KAV + A G ++A + + T +D V
Sbjct: 337 NNGQGTKKDEKKAVEWYTKAAEQGHSSAQYFLGFMYDNGQGTKKDEKKAV 386
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV K+ +A + + K A +G+ A + G MY+
Sbjct: 261 GRMYYNGYGVDKDYKQAFEWYTKAAEQGNVYAQSNLGGMYY------------------- 301
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D N E+A + +A+ G+V AQY L + G+G + ++A WY +AAE G+
Sbjct: 302 DGYGVDKNYEKAFEWYTKAAEQGNVYAQYSLGFMYNNGQGTKKDEKKAVEWYTKAAEQGH 361
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY- 286
A Y Y G+G ++A +W +AA+ GH AQ G ++ G ++ + Y
Sbjct: 362 SSAQYFLGFMYDNGQGTKKDEKKAVEWYTKAAEQGHSSAQNNLGT-IYANGTGVE-INYK 419
Query: 287 --LELATRAGETAADHVKN 303
EL TRA E + +N
Sbjct: 420 KAFELYTRAAEQGNAYAQN 438
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV KN +KA + + K A +G+ A G MY + D+K+A + Y +
Sbjct: 297 GGMYYDGYGVDKNYEKAFEWYTKAAEQGNVYAQYSLGFMYNNGQGTKKDEKKA-VEWYTK 355
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G +AQ + ++AV+ +A+ GH AQ L G GV+
Sbjct: 356 AAEQGHSSAQYFLGFMYDNGQGTKKDEKKAVEWYTKAAEQGHSSAQNNLGTIYANGTGVE 415
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N ++A Y RAAE G A N Y G+G+ + + A W K+AA+ H A+
Sbjct: 416 INYKKAFELYTRAAEQGNAYAQNNLGYMYENGKGVKIDYDTAISWFKKAAENKHPDAE 473
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 25/195 (12%)
Query: 77 TLPQLRAASLVCKSWN----DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
TLPQ ++ DA EA LL GKR+ G GV K+ KA + F KGA
Sbjct: 52 TLPQNEKPEETISEFDKLKLDAESGNSEAQYLL--GKRYSDGDGVEKDYKKAFEWFKKGA 109
Query: 133 ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHV 192
+G+ A G+ Y E ++ A+ L +A G+
Sbjct: 110 DQGNANAQNALGVCYANGQGVEKNYTI-------------------AIDLYKKAIEQGNA 150
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+AQ L + G GVD N ++A Y +AAE G A N Y GEG+ + +A
Sbjct: 151 KAQNNLGNMYYDGNGVDKNYEKAFELYKKAAEQGNAYAQDNLGYMYENGEGVEKNTSEAI 210
Query: 253 KWMKRAADCGHGKAQ 267
KW +AAD G AQ
Sbjct: 211 KWYTKAADQGVANAQ 225
>gi|237747685|ref|ZP_04578165.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379047|gb|EEO29138.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 295
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +K+G VRK++ + L+ +K A +G A G+ Y+ E D KEA Y +
Sbjct: 75 GLLYKNGVIVRKDIGRGLNLIMKSANQGFARAQNYLGVTYYDGNEVEQDYKEA-FDWYGK 133
Query: 163 AAVLGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AAV G P A+ A E +K L +A++ AQY L + RG GV
Sbjct: 134 AAVQGYPDAEYNLAVMYGLGKGTRQDFSETIKWLRKAAMHQLPEAQYGLGVMYSRGLGVV 193
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +++A W+ +AA GY++A + YS G+GL ++A W + AA+ G+ KAQ
Sbjct: 194 KNDEQSAYWFSKAARAGYLKAQNKLGILYSEGKGLEKDEKKAFHWFEAAAEKGYAKAQFN 253
Query: 270 ----HGLGLFTEGEMMKAVVYLELATRAGETAA 298
+ G+ ++ KA+++ A G AA
Sbjct: 254 LAVMYDKGIGVAKDVSKAIMWYRKAATQGNVAA 286
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
R +L+ KS N + + G + G V ++ +A D + K A +G A
Sbjct: 90 RGLNLIMKSANQGFARAQNYL-----GVTYYDGNEVEQDYKEAFDWYGKAAVQGYPDAEY 144
Query: 142 DAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLL 183
+ +MY D E I R+AA+ P AQ N E++
Sbjct: 145 NLAVMYGLGKGTRQDFSET-IKWLRKAAMHQLPEAQYGLGVMYSRGLGVVKNDEQSAYWF 203
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ AG+++AQ +L + G+G++ + ++A W+ AAE GY +A +N ++ Y G G
Sbjct: 204 SKAARAGYLKAQNKLGILYSEGKGLEKDEKKAFHWFEAAAEKGYAKAQFNLAVMYDKGIG 263
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+ +A W ++AA G+ AQ
Sbjct: 264 VAKDVSKAIMWYRKAATQGNVAAQ 287
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 154 EAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLAL 200
+ A+SL+ A DP + A + + L+ +++ G RAQ L +
Sbjct: 53 QQALSLFEAGAKKDDPKSTYALGLLYKNGVIVRKDIGRGLNLIMKSANQGFARAQNYLGV 112
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ G V+ + +EA WY +AA GY A YN ++ Y G+G + KW+++AA
Sbjct: 113 TYYDGNEVEQDYKEAFDWYGKAAVQGYPDAEYNLAVMYGLGKGTRQDFSETIKWLRKAAM 172
Query: 261 CGHGKAQLEHGLGL 274
H + ++GLG+
Sbjct: 173 --HQLPEAQYGLGV 184
>gi|427400391|ref|ZP_18891629.1| hypothetical protein HMPREF9710_01225 [Massilia timonae CCUG 45783]
gi|425720665|gb|EKU83584.1| hypothetical protein HMPREF9710_01225 [Massilia timonae CCUG 45783]
Length = 527
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F+ G+GV ++ +A + + A +G A + G +Y K ++
Sbjct: 77 GVMFQKGQGVEQDFGQAAHWYGRAADQGYAPAQYNLGWLY----AKGHGVA--------- 123
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
++ A+ QA+ G AQ+ L + G+GV + + A RWY RAAE GY
Sbjct: 124 ------SDVGRALHWFSQAADQGEPGAQHNLGMMFETGKGVAQDQEAALRWYRRAAEQGY 177
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 283
VR+ YN L Y G+G+ R+A WM++AA+ GH AQ GL G E + +A
Sbjct: 178 VRSQYNLGLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFNLGLRYDKGQDVEQDSRQA 237
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 331
+++ A G ++ +I RD A+ + RA H
Sbjct: 238 ILWYGRAGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRRAAEQGH 285
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAV 165
+ G GV ++ +AL F + A +G A + G+M+ E K +EAA+ YR+AA
Sbjct: 116 YAKGHGVASDVGRALHWFSQAADQGEPGAQHNLGMMF-ETGKGVAQDQEAALRWYRRAAE 174
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G +Q + EA+ + +A+ GH AQ+ L L +G+ V+ +
Sbjct: 175 QGYVRSQYNLGLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFNLGLRYDKGQDVEQDS 234
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----- 267
++A WY RA E G+ + +N +L Y G G+P A W +RAA+ GH AQ
Sbjct: 235 RQAILWYGRAGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRRAAEQGHAGAQNSLGM 294
Query: 268 -LEHGLG 273
EHG G
Sbjct: 295 RHEHGQG 301
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R++ G+GV +++ +AL K A +G A + GL Y E D ++A I Y +
Sbjct: 185 GLRYEAGQGVARDVREALAWMRKAAEQGHAPAQFNLGLRYDKGQDVEQDSRQA-ILWYGR 243
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A G ++Q P + A+ +A+ GH AQ L + G+GV
Sbjct: 244 AGEQGHASSQFNLALIYDTGHGVPRDEALALTWYRRAAEQGHAGAQNSLGMRHEHGQGVA 303
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +AA WY RAAE G A Y+ G G+ QA W +RAA+ GH +AQ +
Sbjct: 304 VDAAQAAAWYRRAAEQGLPAAQYHLGQLLDAGNGVEQDPAQATDWYRRAAEQGHLRAQFD 363
Query: 270 HGL 272
GL
Sbjct: 364 LGL 366
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ G GV ++ +A D + + A +G A D GL + E D +A ++ YR+
Sbjct: 329 GQLLDAGNGVEQDPAQATDWYRRAAEQGHLRAQFDLGLRFEAGNGVEQDSAQA-LAWYRR 387
Query: 163 AAVLGDPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
AA AQ + EA ++A+ H AQ++L L G+GV+ +
Sbjct: 388 AAGQDYAPAQYMVGALLDRIETGDPVEATDWFHKAADQKHALAQFELGLRYDCGKGVERD 447
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ A WYL AA G+ RA +N + Y+ G+G +A W+ R
Sbjct: 448 YEAAHFWYLCAARQGHARAQFNLGVMYAAGQGAQRDLVEAYAWLHR 493
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ+ L G+GV + + A WY AA G +A YN + + G+G+
Sbjct: 32 GVAQAQHSLGFMYVSGQGVPKSDELAVAWYRMAAAAGLAQAQYNLGVMFQKGQGVEQDFG 91
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNV 304
QA W RAAD G+ AQ G L+ +G ++ +A+ + A GE A H +
Sbjct: 92 QAAHWYGRAADQGYAPAQYNLGW-LYAKGHGVASDVGRALHWFSQAADQGEPGAQHNLGM 150
Query: 305 ILQQLSATSRDR 316
+ + ++D+
Sbjct: 151 MFETGKGVAQDQ 162
>gi|373116045|ref|ZP_09530205.1| hypothetical protein HMPREF0995_01041 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669736|gb|EHO34831.1| hypothetical protein HMPREF0995_01041 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 852
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ +G GV ++ A+ K AA+G+ A G + + + E A LY QAA
Sbjct: 505 YLNGNGVERDAAAAVRWLEKAAAQGNARAQSILGDLCRDGEGTEMDAARAFQLYTQAAEQ 564
Query: 167 GDPAAQPA----------NAEE---AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G P AQ A AE+ AV+ +A+ GH AQ LA C +G GV +
Sbjct: 565 GYPPAQCALGYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDKT 624
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
+A WY RAAE + RAM N LCY +GEG+ +A +W ++AA G+ AQ G
Sbjct: 625 KAVEWYARAAEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFF 684
Query: 273 ---GLFTEGEMMKAVVYLELATRAG 294
G+ + KAV + E A G
Sbjct: 685 YDRGVGVAEDAAKAVEWYERAAEQG 709
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + GRGV ++ +KAL + + AA G A+ GL Y D K A+ Y +A
Sbjct: 214 GDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYETGDGVAEDKAQAVEWYTRA 273
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ A E+A+ L +A+ G RAQ L C G GV+
Sbjct: 274 AEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQARAQSLLGSCYRDGDGVEA 333
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA WY +AA+ Y AM + L + GEGL +A W +AA G+ A
Sbjct: 334 DAAQAAEWYGKAAKQNYPPAMCSLGLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNL 393
Query: 271 GLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
+ L E +AV +LE A A + +L + D+A V
Sbjct: 394 AVCLLNGTGAERSAEEAVGWLEKAAEQEFPRAQGILGDLLLTGNGAPEDKARAV 447
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-------------KKE 154
G F+ G G+ ++ KA+ + K A G AM + + +K
Sbjct: 358 GLAFELGEGLTEDPAKAVYWYTKAAGEGYAPAMTNLAVCLLNGTGAERSAEEAVGWLEKA 417
Query: 155 AAISLYRQAAVLGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A R +LGD P + AV+L A+ G+V A L LC G GV+
Sbjct: 418 AEQEFPRAQGILGDLLLTGNGAPEDKARAVELYRAAAKGGYVPAMCDLGLCYENGDGVEE 477
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+L+ A WY ++AE GY N ++CY G G+ A +W+++AA G+ +AQ
Sbjct: 478 DLRHAVLWYRKSAEEGYAPGQCNLAVCYLNGNGVERDAAAAVRWLEKAAAQGNARAQSIL 537
Query: 271 G-LGLFTEGEMMKAVVYLELATRAGETA---ADHVKNVILQQLSATSRDRAMLV 320
G L EG M A +L T+A E A + S T+ D+ V
Sbjct: 538 GDLCRDGEGTEMDAARAFQLYTQAAEQGYPPAQCALGYCYEVGSGTAEDKTKAV 591
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G GV +++ +A+ F K GS A G Y + KE A+SLYR++A
Sbjct: 181 YLNGIGVEEDMAQAVAWFQKAVEGGSARAKSILGDFYLDGRGVEQDKEKALSLYRESAA- 239
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G++ A L LC G GV + +A WY RAAEGG
Sbjct: 240 ----------------------DGYLPAICSLGLCYETGDGVAEDKAQAVEWYTRAAEGG 277
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y A N + C+ G G+ + +A W+++AA+ G +AQ
Sbjct: 278 YAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQARAQ 318
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 18/186 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAIS 158
+ G +++G GV ++ KA + + K A RG A + G Y + A+
Sbjct: 641 AMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAEDAAKAVE 700
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y +AA G P AQ + AVKL QA+ G Q L C+ +G
Sbjct: 701 WYERAAEQGYPRAQCNLGYCYESGKGVKEDKTRAVKLYRQAAEQGSSVGQCNLGYCMLKG 760
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-HG 264
G+ + +A W+ +AAEGG RAM CY G+G+ QAR ++A D G
Sbjct: 761 IGIRPDPAQAVYWFRKAAEGGSGRAMCLLGDCYREGQGVEADAAQARTCYQKAIDLGFDA 820
Query: 265 KAQLEH 270
K +LE
Sbjct: 821 KEELEE 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AIS 158
L G ++HG GV ++ KA++ + K A + A + G++ EA A
Sbjct: 29 ALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADPAAAAE 88
Query: 159 LYRQAA---------VLGDP-------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+R+AA +LGD A PA A E L QA+ G+ A L LC
Sbjct: 89 WFRRAAEQSFARAQDLLGDCYLDGKGVEADPARAAE---LYRQAADQGYAPALCDLGLCY 145
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GV + +AA Y +AAE Y AM N ++CY G G+ QA W ++A + G
Sbjct: 146 ENANGVAEDKVQAAECYRKAAEQDYAPAMCNLAVCYLNGIGVEEDMAQAVAWFQKAVEGG 205
Query: 263 HGKAQ 267
+A+
Sbjct: 206 SARAK 210
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G + G G + +A + + A +G A G Y + K A+ Y +A
Sbjct: 538 GDLCRDGEGTEMDAARAFQLYTQAAEQGYPPAQCALGYCYEVGSGTAEDKTKAVEWYEKA 597
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +AV+ +A+ H RA L LC G GV
Sbjct: 598 AQRGHATAQCNLAYCYEQGIGVAEDKTKAVEWYARAAEQEHPRAMCNLGLCYEYGEGVAE 657
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA WY +AA GY A N Y G G+ +A +W +RAA+ G+ +AQ
Sbjct: 658 DKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAEDAAKAVEWYERAAEQGYPRAQCNL 717
Query: 271 GLGLFTEGEMMK 282
G + G+ +K
Sbjct: 718 GY-CYESGKGVK 728
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G ++ KA++ + K A RG A + Y + + K A+ Y +A
Sbjct: 574 GYCYEVGSGTAEDKTKAVEWYEKAAQRGHATAQCNLAYCYEQGIGVAEDKTKAVEWYARA 633
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P A + +A + +A+ G+ AQ L RG GV
Sbjct: 634 AEQEHPRAMCNLGLCYEYGEGVAEDKTKAAEWYEKAARRGYAPAQCNLGFFYDRGVGVAE 693
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY RAAE GY RA N CY G+G+ +A K ++AA+ G Q
Sbjct: 694 DAAKAVEWYERAAEQGYPRAQCNLGYCYESGKGVKEDKTRAVKLYRQAAEQGSSVGQCNL 753
Query: 271 GL----GLFTEGEMMKAVVYLELATRAG 294
G G+ + +AV + A G
Sbjct: 754 GYCMLKGIGIRPDPAQAVYWFRKAAEGG 781
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 88/234 (37%), Gaps = 69/234 (29%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G + G+GV + +A + + + A +G A+ D GL Y DK +AA YR+
Sbjct: 106 GDCYLDGKGVEADPARAAELYRQAADQGYAPALCDLGLCYENANGVAEDKVQAA-ECYRK 164
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA + A LA+C G GV+ ++ +A W+ +A
Sbjct: 165 AAEQD-----------------------YAPAMCNLAVCYLNGIGVEEDMAQAVAWFQKA 201
Query: 223 AEG------------------------------------GYVRAMYNTSLCYSFGEGLPL 246
EG GY+ A+ + LCY G+G+
Sbjct: 202 VEGGSARAKSILGDFYLDGRGVEQDKEKALSLYRESAADGYLPAICSLGLCYETGDGVAE 261
Query: 247 SHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGET 296
QA +W RAA+ G+ AQ G+ E KA+ +LE A G+
Sbjct: 262 DKAQAVEWYTRAAEGGYAPAQTNLAYCFLTGIGMEAAPEKAIPWLEKAAEQGQA 315
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AV+ +A+ + AQ L + G G + + AA W+ RAAE + RA CY
Sbjct: 50 AVECYRKAAEQDYAPAQCNLGVLTLHGVGTEADPAAAAEWFRRAAEQSFARAQDLLGDCY 109
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
G+G+ +A + ++AAD G+ A + GL
Sbjct: 110 LDGKGVEADPARAAELYRQAADQGYAPALCDLGL 143
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA +L QA+ + A L LC G GV+ + +A Y +AAE Y A N +
Sbjct: 13 EAARLYRQAAEQDYPPALCNLGLCYEHGDGVEQDKAKAVECYRKAAEQDYAPAQCNLGVL 72
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G G A +W +RAA+ +AQ
Sbjct: 73 TLHGVGTEADPAAAAEWFRRAAEQSFARAQ 102
>gi|340363635|ref|ZP_08685958.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339885314|gb|EGQ75043.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 348
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 23/238 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A + L G ++ G+GVR++ +A F K A G A + +MY E E
Sbjct: 45 DAELQLALGVMYEQGKGVRQDYAEAAGWFRKAAELGLAAAQYNLAVMYTEGRGVRQDYEE 104
Query: 156 AISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR+AA G AQ + +AV+ +A G AQY L L
Sbjct: 105 AVRWYRKAADQGFAEAQNNLGAMYKDGKGIRQDDNQAVQWYRKAVEQGVAAAQYNLGLMY 164
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ GRGV + ++A +WY +AA GY A N + Y G+G+ + QA KW ++AA+ G
Sbjct: 165 YEGRGVRQDYKQALQWYRKAAGQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQG 224
Query: 263 HGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ +AQ G+ ++TEG+ ++ AV + A G+ A + V+ + +D
Sbjct: 225 NAEAQYNLGV-MYTEGQGVRQDDAQAVQWFRRAVEQGDANAQYNLGVMYAKGRGVRQD 281
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 21/184 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +K G+G+R++ ++A+ + K +G A + GLMY+E D K+A + YR+
Sbjct: 125 GAMYKDGKGIRQDDNQAVQWYRKAVEQGVAAAQYNLGLMYYEGRGVRQDYKQA-LQWYRK 183
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + +AVK +A+ G+ AQY L + G+GV
Sbjct: 184 AAGQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGVMYTEGQGVR 243
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A +W+ RA E G A YN + Y+ G G+ + Q + +AA HG A+ +
Sbjct: 244 QDDAQAVQWFRRAVEQGDANAQYNLGVMYAKGRGVRQDYVQTLQLWHKAAR--HGVAEAQ 301
Query: 270 HGLG 273
GLG
Sbjct: 302 SGLG 305
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A K + Q + AG Q L + +G+GV + EAA W+ +AAE G A YN ++ Y
Sbjct: 33 AQKEMLQLAEAGDAELQLALGVMYEQGKGVRQDYAEAAGWFRKAAELGLAAAQYNLAVMY 92
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA 293
+ G G+ + +A +W ++AAD G +AQ G ++ +G+ ++ AV + A
Sbjct: 93 TEGRGVRQDYEEAVRWYRKAADQGFAEAQNNLG-AMYKDGKGIRQDDNQAVQWYRKAVEQ 151
Query: 294 GETAADH 300
G AA +
Sbjct: 152 GVAAAQY 158
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G +K G+GVRK+ +A+ + K A +G+ A + G+MY E + + +A A+ +R+A
Sbjct: 197 GVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGVMYTEGQGVRQDDAQAVQWFRRA 256
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
GD AQ + + ++L ++A+ G AQ L + GRGV
Sbjct: 257 VEQGDANAQYNLGVMYAKGRGVRQDYVQTLQLWHKAARHGVAEAQSGLGWMYYTGRGVRQ 316
Query: 211 NLQEAARWYLRAAEGGY 227
N A WY +A + G+
Sbjct: 317 NSVIAKEWYKKACDNGF 333
>gi|260753305|ref|YP_003226198.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552668|gb|ACV75614.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 237
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
R GR V+ D K A RG A G Y + E A+S Y+++A
Sbjct: 19 RIGVGRVVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSAS 78
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G AQ P + ++AV +A+ G+ AQY L + G+GV +
Sbjct: 79 QGYAPAQAALGYAYSSGLGVPHDDQQAVSFFQKAANQGNASAQYNLGMAYSNGQGVPHSD 138
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+EAA WY RAA GY A +N Y GEG+ + QA W ++AA+ G KAQ G+
Sbjct: 139 EEAASWYQRAAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGV 198
Query: 273 GLFTEGEMMK----AVVYLELATRAGETAADHV 301
T + K A+++++ A G+ A +
Sbjct: 199 AYITGRGVAKSRDNALIWIQKAADQGDVTAQKI 231
>gi|82701239|ref|YP_410805.1| Sel1 repeat-containing protein [Nitrosospira multiformis ATCC
25196]
gi|82409304|gb|ABB73413.1| Sel1-like repeat [Nitrosospira multiformis ATCC 25196]
Length = 489
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 28/173 (16%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G G+ ++ +A + K A +G A + G+MY + + A+S YRQAA GDP
Sbjct: 288 GLGIPEDAYEAAAWYRKAAEQGYAPAQFNLGVMYATGKGVIRDERQAVSWYRQAAEQGDP 347
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
AQY L + GRG++ + Q+A WY +AAE GY R
Sbjct: 348 -----------------------DAQYNLGVRYDTGRGIEKDPQQAVAWYRKAAEQGYAR 384
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A Y+ + Y G+G+P + QA W +AA+ GH AQ G+ L+ G +K
Sbjct: 385 AQYSVGVKYDSGQGVPQDYAQALAWYLKAAEQGHAGAQTNLGV-LYYNGNGVK 436
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 23/238 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G+GV ++ +A+ + + A G +A + G+MY + E A+S Y +A
Sbjct: 102 GYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGVMYAKGQGVEKDYRHALSWYLKA 161
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +AV +A+ G+ AQY L + +GRGV
Sbjct: 162 AEQGHAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAAEQGYGEAQYALGVLYAKGRGVAQ 221
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ QEAA WY +AAE G A +N + ++ GEG+ +RQA ++AAD G+ +AQ +
Sbjct: 222 SNQEAASWYRKAAEQGNTDAQFNLGMMFATGEGVTQDYRQAASLYRQAADQGYARAQFKL 281
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G+ GL + +A + A G A V+ RD V SW
Sbjct: 282 GVANAKGLGIPEDAYEAAAWYRKAAEQGYAPAQFNLGVMYATGKGVIRDERQAV--SW 337
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
+ K+ KA+ SF K A G+ A + G++Y R V P +
Sbjct: 39 LSKDYTKAMQSFRKAANAGNADAQFNLGVLY------------SRGRGV-------PQDH 79
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+A K +A+ G AQ L +G+GV + Q+A WY RAA+ GY A YN +
Sbjct: 80 EQAAKWYRRAAEQGDAPAQSMLGYMYLKGQGVPQDYQQAMFWYFRAADSGYAVAQYNLGV 139
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
Y+ G+G+ +R A W +AA+ GH AQ G G E + +AV + A
Sbjct: 140 MYAKGQGVEKDYRHALSWYLKAAEQGHAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAAE 199
Query: 293 AGETAADHVKNVIL 306
G A + V+
Sbjct: 200 QGYGEAQYALGVLY 213
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 26/199 (13%)
Query: 86 LVCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
++ K + A++ R+A G + GRGV ++ ++A + + A +G A
Sbjct: 38 VLSKDYTKAMQSFRKAANAGNADAQFNLGVLYSRGRGVPQDHEQAAKWYRRAAEQGDAPA 97
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLA 199
G MY L Q P + ++A+ ++A+ +G+ AQY L
Sbjct: 98 QSMLGYMY-----------LKGQGV--------PQDYQQAMFWYFRAADSGYAVAQYNLG 138
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +G+GV+ + + A WYL+AAE G+ A Y G+G+ QA W ++AA
Sbjct: 139 VMYAKGQGVEKDYRHALSWYLKAAEQGHAPAQAIMGFMYLKGQGVEQDDHQAVSWYRKAA 198
Query: 260 DCGHGKAQLEHGLGLFTEG 278
+ G+G+AQ G+ L+ +G
Sbjct: 199 EQGYGEAQYALGV-LYAKG 216
>gi|291000098|ref|XP_002682616.1| hypothetical protein NAEGRDRAFT_37337 [Naegleria gruberi]
gi|284096244|gb|EFC49872.1| hypothetical protein NAEGRDRAFT_37337 [Naegleria gruberi]
Length = 292
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G+GV ++ KA + FLK A +G + A + LMY E I +L D +
Sbjct: 110 YENGKGVEQDYSKAFEWFLKSAKQGDSNAQFNLALMY------ENGI------GILQDYS 157
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+A + +++ G+ RAQ+ LAL G G+ + +A WYL++AE GY A
Sbjct: 158 -------KAFEWYLKSAGQGYSRAQFNLALMYENGIGILQDYSKAFEWYLKSAEQGYSNA 210
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+N +L Y GEG+ + +A +W ++A+ G +AQ + + ++ GE
Sbjct: 211 QFNLALMYENGEGILQDYSKAFEWYLKSAEQGDSRAQFKLAV-MYYNGE 258
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+++G G+ ++ KA + FLK A +G + A + LMY + A Y ++A
Sbjct: 38 YENGEGIVQDYSKAFEWFLKSAEQGYSNAQFNLALMYDNGIGILQDYSKAFEWYLKSAKQ 97
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ + +A + +++ G AQ+ LAL G G+ +
Sbjct: 98 GDSRAQFNLALMYENGKGVEQDYSKAFEWFLKSAKQGDSNAQFNLALMYENGIGILQDYS 157
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WYL++A GY RA +N +L Y G G+ + +A +W ++A+ G+ AQ L
Sbjct: 158 KAFEWYLKSAGQGYSRAQFNLALMYENGIGILQDYSKAFEWYLKSAEQGYSNAQFNLAL- 216
Query: 274 LFTEGE 279
++ GE
Sbjct: 217 MYENGE 222
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 29/193 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA--VLGD 168
+++G G+ ++ KA + FLK A +G + A + +MY + E + Y +A L
Sbjct: 2 YENGEGILQDYSKAFEWFLKSAEQGDSNAQFNLAVMY---ENGEGIVQDYSKAFEWFLKS 58
Query: 169 PAAQPANAEEAVKLLYQASIA------------------GHVRAQYQLALCLHRGRGVDF 210
+NA+ + L+Y I G RAQ+ LAL G+GV+
Sbjct: 59 AEQGYSNAQFNLALMYDNGIGILQDYSKAFEWYLKSAKQGDSRAQFNLALMYENGKGVEQ 118
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ +A W+L++A+ G A +N +L Y G G+ + +A +W ++A G+ +AQ
Sbjct: 119 DYSKAFEWFLKSAKQGDSNAQFNLALMYENGIGILQDYSKAFEWYLKSAGQGYSRAQFNL 178
Query: 269 ----EHGLGLFTE 277
E+G+G+ +
Sbjct: 179 ALMYENGIGILQD 191
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ LA+ G G+ + +A W+L++AE GY A +N +L Y G G+ +
Sbjct: 26 GDSNAQFNLAVMYENGEGIVQDYSKAFEWFLKSAEQGYSNAQFNLALMYDNGIGILQDYS 85
Query: 250 QARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+A +W ++A G +AQ E+G G+ E + KA + + + G++ A
Sbjct: 86 KAFEWYLKSAKQGDSRAQFNLALMYENGKGV--EQDYSKAFEWFLKSAKQGDSNA 138
>gi|242278361|ref|YP_002990490.1| Sel1 domain-containing protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
gi|242121255|gb|ACS78951.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
salexigens DSM 2638]
Length = 487
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLY 160
R G +++ GV KNL +A++ + K A +G++ G MY + D EAA L+
Sbjct: 301 RLGVMYEYSEGVEKNLFEAVEWYKKSAEQGNSGGQWRLGNMYKFGRGVDEDINEAA-KLF 359
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R++A GD Q N EAVK ++A+ G +Q++L +G G
Sbjct: 360 RKSAEQGDSGGQLRLGIVYEYGEGVEKNFAEAVKWYHRAADQGESESQWRLGKMYKQGLG 419
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
VD NL EA +W+ ++AE G + ++ Y FGEG+ +A KW ++AA G+G A+
Sbjct: 420 VDKNLFEAVKWFKKSAELGDFEGQWRLAIAYEFGEGVEEDITEAVKWYRKAAAQGYGPAK 479
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 102/246 (41%), Gaps = 61/246 (24%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAV 165
++ HG+GV++NL +A+ + K A +G ++A MY E +DK A A+ YR+AA
Sbjct: 53 KYSHGKGVKQNLTEAVKWYRKSAKQGDSIAQWSLAFMYEEGTGVDKNLAKAVKWYRKAAE 112
Query: 166 LGDPAAQ-------------------------------------------------PANA 176
GD Q N
Sbjct: 113 QGDSDGQWLLGTMYMYGKGVGKKLSEAVRWFRKSAEQGNYGGQWRLGVMYEYQMGVERNF 172
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA K +A+ G Q++LA G GVD NL EA WY +AAE G A +
Sbjct: 173 AEAAKWYRKAAEQGASDGQWRLARMYEFGNGVDKNLSEAVSWYRKAAEQGDPDAQWLLGK 232
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 290
Y++G G+ + +A KW K++A G Q ++G G TE ++A+ + ++
Sbjct: 233 MYAYGFGVDQNFFEAVKWYKKSAVQGASVGQWIISDMYKYGKG--TEKNFVEAIKWARMS 290
Query: 291 TRAGET 296
G++
Sbjct: 291 AEQGDS 296
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
GK + +G GV +N +A+ + K A +G+++ MY E AI R +
Sbjct: 231 GKMYAYGFGVDQNFFEAVKWYKKSAVQGASVGQWIISDMYKYGKGTEKNFVEAIKWARMS 290
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD Q N EAV+ +++ G+ Q++L GRGVD
Sbjct: 291 AEQGDSNGQWRLGVMYEYSEGVEKNLFEAVEWYKKSAEQGNSGGQWRLGNMYKFGRGVDE 350
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
++ EAA+ + ++AE G + Y +GEG+ + +A KW RAAD G ++Q
Sbjct: 351 DINEAAKLFRKSAEQGDSGGQLRLGIVYEYGEGVEKNFAEAVKWYHRAADQGESESQWRL 410
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGE 295
G GL + + +AV + + + G+
Sbjct: 411 GKMYKQGLGVDKNLFEAVKWFKKSAELGD 439
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQAAVL 166
++ G GV KNL +A+ + K A +G A G MY + +D+ A+ Y+++AV
Sbjct: 198 YEFGNGVDKNLSEAVSWYRKAAEQGDPDAQWLLGKMYAYGFGVDQNFFEAVKWYKKSAVQ 257
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G Q N EA+K ++ G Q++L + GV+ NL
Sbjct: 258 GASVGQWIISDMYKYGKGTEKNFVEAIKWARMSAEQGDSNGQWRLGVMYEYSEGVEKNLF 317
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
EA WY ++AE G + Y FG G+ +A K +++A+ G QL G+
Sbjct: 318 EAVEWYKKSAEQGNSGGQWRLGNMYKFGRGVDEDINEAAKLFRKSAEQGDSGGQLRLGIV 377
Query: 273 ---GLFTEGEMMKAVVYLELATRAGET 296
G E +AV + A GE+
Sbjct: 378 YEYGEGVEKNFAEAVKWYHRAADQGES 404
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKE---AAISLYRQA 163
G + +G+GV K L +A+ F K A +G+ G+MY ++M + A YR+A
Sbjct: 123 GTMYMYGKGVGKKLSEAVRWFRKSAEQGNYGGQWRLGVMYEYQMGVERNFAEAAKWYRKA 182
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G Q N EAV +A+ G AQ+ L G GVD
Sbjct: 183 AEQGASDGQWRLARMYEFGNGVDKNLSEAVSWYRKAAEQGDPDAQWLLGKMYAYGFGVDQ 242
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EA +WY ++A G + S Y +G+G + +A KW + +A+ G Q
Sbjct: 243 NFFEAVKWYKKSAVQGASVGQWIISDMYKYGKGTEKNFVEAIKWARMSAEQGDSNGQWRL 302
Query: 271 GLGL-FTEG---EMMKAVVYLELATRAGETAA 298
G+ ++EG + +AV + + + G +
Sbjct: 303 GVMYEYSEGVEKNLFEAVEWYKKSAEQGNSGG 334
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 19/123 (15%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR G +++G GV KN +A+ + + A +G + + W + K +Y+Q
Sbjct: 372 LRLGIVYEYGEGVEKNFAEAVKWYHRAADQGESESQ-------WRLGK------MYKQGL 418
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+ N EAVK +++ G Q++LA+ G GV+ ++ EA +WY +AA
Sbjct: 419 GV------DKNLFEAVKWFKKSAELGDFEGQWRLAIAYEFGEGVEEDITEAVKWYRKAAA 472
Query: 225 GGY 227
GY
Sbjct: 473 QGY 475
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ +LA G+GV NL EA +WY ++A+ G A ++ + Y G G+ +
Sbjct: 42 GHSIAQRRLAYKYSHGKGVKQNLTEAVKWYRKSAKQGDSIAQWSLAFMYEEGTGVDKNLA 101
Query: 250 QARKWMKRAADCGHGKAQ 267
+A KW ++AA+ G Q
Sbjct: 102 KAVKWYRKAAEQGDSDGQ 119
>gi|375273604|gb|AFA43701.1| SEL1L [Danio rerio]
Length = 776
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G+T AM G MY E + E A+ +++AA LG+
Sbjct: 370 GRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKAADLGN 429
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 430 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 489
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++ G++ A YN + ++ G G+ S A + K + G +L F
Sbjct: 490 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMAAYRSF 549
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLS 310
EG+M A++ YL LA + E A +V V+ Q+ S
Sbjct: 550 KEGDMDSALIQYLLLAEQGYEVAQSNVAFVLDQKGS 585
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW E A++ YR
Sbjct: 245 GFLYAAGLGVNSSHAKALVYYTFGALGGNLVAHIILGYRYWGGVGVPQSCEPALTHYRLV 304
Query: 164 A--VLGDPAAQPANAEEAVKLL-------------------YQASIA--GHVRAQYQLA- 199
A V D + +A + ++LL Y +A G V+AQ L
Sbjct: 305 ANHVASDVSLTGGSAVQRIRLLDEVENPGSSSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 364
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G E +P ++ A + K+A
Sbjct: 365 LHLHGGRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKA 424
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 425 ADLGNPVGQ--SGLGM 438
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV N D AL F K A +G + G MY+ I + R
Sbjct: 437 GMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYN------GIGVKR------ 484
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
+ ++A+K AS AGH+ A Y LA G GV + A + E G
Sbjct: 485 -------DYKQALKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERG 536
>gi|399116439|emb|CCG19245.1| conserved hypothetical Sel1 repeat protein [Taylorella
asinigenitalis 14/45]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK-EA 155
+A G + G GV KN +++ + K AA+G A+ + G MY +DK +
Sbjct: 87 DAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYLMGLGVDKDYKK 146
Query: 156 AISLYRQAAVLGDPAA--------------QPANAEEAVKLLYQASIAGHVRAQYQLALC 201
A + +A+ G P A +P NA +A L A+ AG+V A + L LC
Sbjct: 147 AFENFEKASTKGFPEAIYNLGYLYQKGWGVEP-NAAKARDLFETAATAGNVSAMFNLGLC 205
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
GRG D + ++A WY +AA G+V A N Y G+G+ + +A +W K+AA
Sbjct: 206 YQYGRGTDKDAKKAKEWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEAMEWYKKAAQK 265
Query: 262 GHGKAQLEHGLGLFTEGE 279
AQ G L+ G+
Sbjct: 266 NEPIAQYNVG-ALYENGK 282
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AIS 158
L G + G GV K+ KA ++F K + +G A+ + G +Y W ++ A A
Sbjct: 126 ALNNLGYMYLMGLGVDKDYKKAFENFEKASTKGFPEAIYNLGYLYQKGWGVEPNAAKARD 185
Query: 159 LYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L+ AA G+ +A +A++A + +A+ AGHV AQ L +G
Sbjct: 186 LFETAATAGNVSAMFNLGLCYQYGRGTDKDAKKAKEWYEKAANAGHVLAQRNLGYLYEKG 245
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G+D + EA WY +AA+ A YN Y G+G + + A W + A D
Sbjct: 246 DGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYENGKGTTKNFKNATTWYQLACD 300
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G Q++L +G GV N ++ +WY ++A G+V A+ N Y G G+ ++
Sbjct: 86 GDAHYQFELGYMYFKGEGVTKNYTQSVQWYEKSAAQGFVHALNNLGYMYLMGLGVDKDYK 145
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A + ++A+ G +A G G E KA E A AG +A +
Sbjct: 146 KAFENFEKASTKGFPEAIYNLGYLYQKGWGVEPNAAKARDLFETAATAGNVSAMFNLGLC 205
Query: 306 LQQLSATSRD 315
Q T +D
Sbjct: 206 YQYGRGTDKD 215
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAI 157
+ G ++ G GV N KA D F A G+ AM + GL Y + D K+A
Sbjct: 162 AIYNLGYLYQKGWGVEPNAAKARDLFETAATAGNVSAMFNLGLCYQYGRGTDKDAKKAK- 220
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
Y +AA G AQ + +EA++ +A+ AQY +
Sbjct: 221 EWYEKAANAGHVLAQRNLGYLYEKGDGIDHDYDEAMEWYKKAAQKNEPIAQYNVGALYEN 280
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRA 230
G+G N + A WY A + + A
Sbjct: 281 GKGTTKNFKNATTWYQLACDNKFESA 306
>gi|410916375|ref|XP_003971662.1| PREDICTED: protein sel-1 homolog 1-like [Takifugu rubripes]
Length = 787
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A D F + A G+T AM G MY + + E A+ +++A+ LG+
Sbjct: 351 GRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSDGSEFLPQNNETALKYFKKASELGN 410
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 411 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGLVDGQLQLGTMYYNGIGVKRDYKQA 470
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++ G+V A Y + ++ G G+ S A + K + G +L G F
Sbjct: 471 LKFFNLASQAGHVLAFYYLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYGSF 530
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
EGE A+V YL LA + E A +V ++ Q+
Sbjct: 531 REGETDAALVQYLLLAEQGYEVAQSNVAFILDQK 564
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR-- 161
G + G GV + KAL + GA G+ +A + G YW E+A++ YR
Sbjct: 226 GFLYAAGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWGGVGVPQSCESALTHYRLV 285
Query: 162 ----------------QAAVLGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
Q L D A P + EE + YQ + G V+AQ L
Sbjct: 286 ANQVASEVTLTGGTAVQKIRLLDEAENPGSTSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 345
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G E LP ++ A K+ K+A
Sbjct: 346 LHLHGGRGVEQNHQRAFDYFTQAANAGNTHAMAFLGKMYSDGSEFLPQNNETALKYFKKA 405
Query: 259 ADCGHGKAQLEHGLGL 274
++ G+ Q GLG+
Sbjct: 406 SELGNPVGQ--SGLGM 419
>gi|307611062|emb|CBX00703.1| Dot/Icm T4SS effector [Legionella pneumophila 130b]
Length = 375
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 29/246 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ H ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGK 248
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 270 HGL----GLFTEGEMMKAVVYLELA-----TRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ G+ + +KA + A +A A+D K++ + LS +R
Sbjct: 309 LGIYYRDGIGVAADPVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLS-KARTLGQQY 367
Query: 321 VDSWRA 326
D+++A
Sbjct: 368 TDNYKA 373
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 79/203 (38%), Gaps = 31/203 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ E Y++A
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEG----YKKAFEWY 114
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 115 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 158
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 159 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDFQK 217
Query: 283 AVVYLELATRAGETAADHVKNVI 305
A Y E A DH K+ +
Sbjct: 218 AAEYFEKAAN-----QDHAKSQL 235
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 27 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 86
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 87 NVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 146
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 147 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 206
Query: 308 QLSATSRD 315
Q +D
Sbjct: 207 QGDGVPKD 214
>gi|255261700|ref|ZP_05341042.1| Sel1 repeat family protein [Thalassiobium sp. R2A62]
gi|255104035|gb|EET46709.1| Sel1 repeat family protein [Thalassiobium sp. R2A62]
Length = 348
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 95 LRPLRE------------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
LRP E A LL G ++ G+GV ++ +A+ + K A +G A +
Sbjct: 42 LRPFAEQENPFAEQKNAAAQALL--GVMYEFGQGVPQDYTEAVSWYRKAAEQGVDFAQKN 99
Query: 143 AGLMY---WEMDKKEA-AISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQ 185
G MY W + + +A A+S YR+AA G AQ + EAV +
Sbjct: 100 LGNMYANGWGVPQDDAEAVSWYRKAAEQGFADAQHNLGFMYENGRGVIQDYTEAVSWYRR 159
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ L G+GV + EA WY +AAE G RA +N Y G G+P
Sbjct: 160 AAEQGFADAQTNLGFMYENGQGVLQDYTEAVNWYRKAAEQGLARAQFNLGNMYKNGRGVP 219
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ +A W ++AA+ G KAQ GL ++ G+
Sbjct: 220 QDYAEAVSWYRKAAEQGEAKAQTNLGL-MYKNGQ 252
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 131/318 (41%), Gaps = 41/318 (12%)
Query: 10 STGSRFTALQF--PITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTE---------- 57
TG TALQ P E++N E +A +A + F TE
Sbjct: 31 GTGDYATALQELRPFAEQENPFAEQKNAAAQALLGVMYEFGQGVPQDYTEAVSWYRKAAE 90
Query: 58 -GHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
G DFA ++ N A + +PQ A ++ SW A G +++GRG
Sbjct: 91 QGVDFAQK--NLGNMYANGWGVPQDDAEAV---SWYRKAAEQGFADAQHNLGFMYENGRG 145
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
V ++ +A+ + + A +G A + G MY + + + Y
Sbjct: 146 VIQDYTEAVSWYRRAAEQGFADAQTNLGFMY---ENGQGVLQDYT--------------- 187
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EAV +A+ G RAQ+ L GRGV + EA WY +AAE G +A N L
Sbjct: 188 -EAVNWYRKAAEQGLARAQFNLGNMYKNGRGVPQDYAEAVSWYRKAAEQGEAKAQTNLGL 246
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATR 292
Y G+G+ + +A W ++AA+ G+ AQ G LG + + A ++ +
Sbjct: 247 MYKNGQGVLQDYAEAVSWYRKAAEQGNAVAQANLGNMYALGRGVIQDNILAHMWFNIGGA 306
Query: 293 AGETAADHVKNVILQQLS 310
G +++I ++++
Sbjct: 307 NGNEIGSENRDIIAEEMT 324
>gi|222054048|ref|YP_002536410.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221563337|gb|ACM19309.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 394
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 74/146 (50%), Gaps = 24/146 (16%)
Query: 135 GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRA 194
GS A+ GLMY E G +P N E +K +A+ G V+A
Sbjct: 49 GSPKALYQIGLMYAE-----------------GKGVRKP-NPTEGMKWYRKAADQGFVKA 90
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
QY L L G G N +EAARWY +AA+ G+V A YN + YS G+G+ +A KW
Sbjct: 91 QYALGLLYALGEGTLTNRKEAARWYRKAADQGHVTAQYNLAQMYSRGDGVKQDEAEAFKW 150
Query: 255 MKRAADCGHGKAQL------EHGLGL 274
++AA+ GHG AQL + GLG+
Sbjct: 151 YRKAAEQGHGTAQLTIAQLYDKGLGV 176
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 88 CKSWND-----ALRPLR---EAMVLLRWGKRFKHGRGVRK-NLDKALDSFLKGAARGSTL 138
+++ND A+R R L + G + G+GVRK N + + + K A +G
Sbjct: 30 LRAYNDGDFATAMREFRTDGSPKALYQIGLMYAEGKGVRKPNPTEGMKWYRKAADQGFVK 89
Query: 139 AMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPAAQPANAE-------------EAVK 181
A GL+Y + ++ A YR+AA G AQ A+ EA K
Sbjct: 90 AQYALGLLYALGEGTLTNRKEAARWYRKAADQGHVTAQYNLAQMYSRGDGVKQDEAEAFK 149
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
+A+ GH AQ +A +G GV + +EAARWYL+AAE G A + + Y G
Sbjct: 150 WYRKAAEQGHGTAQLTIAQLYDKGLGVAPDKKEAARWYLKAAEQGKPAAQFAVATMYEKG 209
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EG+ ++A KW +RAA+ H KAQ + G
Sbjct: 210 EGVEADKKEALKWFRRAAEQKHAKAQFKVGF 240
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ G GV + +A +LK A +G A MY E DKKEA + +R+AA
Sbjct: 170 YDKGLGVAPDKKEAARWYLKAAEQGKPAAQFAVATMYEKGEGVEADKKEA-LKWFRRAAE 228
Query: 166 LGDPAAQ----------PANAE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
AQ + AE EAVK +A+ +G AQ+ L + + GRG++ N
Sbjct: 229 QKHAKAQFKVGFYYDRDDSGAEGKKEAVKWYRRAAESGVSEAQFNLGILYYYGRGIERNK 288
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+EA +W+ +AA G A +N Y G+G+ ++A KW +++AD G +AQ GL
Sbjct: 289 KEAVKWFRKAAGQGDSDAQFNLGHMYDQGDGIKQDWKEAVKWYRKSADQGFDQAQFSLGL 348
Query: 273 GLF 275
F
Sbjct: 349 MYF 351
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
++ G GV + +AL F + A + A G Y D K+ A+ YR+AA
Sbjct: 206 YEKGEGVEADKKEALKWFRRAAEQKHAKAQFKVGFYYDRDDSGAEGKKEAVKWYRRAAES 265
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ N +EAVK +A+ G AQ+ L +G G+ + +
Sbjct: 266 GVSEAQFNLGILYYYGRGIERNKKEAVKWFRKAAGQGDSDAQFNLGHMYDQGDGIKQDWK 325
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
EA +WY ++A+ G+ +A ++ L Y G G+ + R+A KW +AA+ G
Sbjct: 326 EAVKWYRKSADQGFDQAQFSLGLMYFHGHGVKQNRREAIKWFVKAAEQG 374
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +GRG+ +N +A+ F K A +G + A + G MY D+ GD
Sbjct: 278 YYYGRGIERNKKEAVKWFRKAAGQGDSDAQFNLGHMY---DQ--------------GDGI 320
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q + +EAVK +++ G +AQ+ L L G GV N +EA +W+++AAE G A
Sbjct: 321 KQ--DWKEAVKWYRKSADQGFDQAQFSLGLMYFHGHGVKQNRREAIKWFVKAAEQGSEEA 378
Query: 231 M 231
+
Sbjct: 379 I 379
>gi|54295067|ref|YP_127482.1| hypothetical protein lpl2147 [Legionella pneumophila str. Lens]
gi|53754899|emb|CAH16387.1| hypothetical protein lpl2147 [Legionella pneumophila str. Lens]
Length = 373
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 29/246 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 128 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 186
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ H ++Q +L G+
Sbjct: 187 AADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGK 246
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 247 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 306
Query: 270 HGL----GLFTEGEMMKAVVYLELA-----TRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ G+ + +KA + A +A A+D K++ + LS +R
Sbjct: 307 LGIYYRDGIGVAADPVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLS-KARTLGQQY 365
Query: 321 VDSWRA 326
D+++A
Sbjct: 366 TDNYKA 371
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 79/203 (38%), Gaps = 31/203 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ E Y++A
Sbjct: 57 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEG----YKKAFEWY 112
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 113 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 156
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 157 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDFQK 215
Query: 283 AVVYLELATRAGETAADHVKNVI 305
A Y E A DH K+ +
Sbjct: 216 AAEYFEKAAN-----QDHAKSQL 233
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 25 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 84
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 85 NVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 144
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 145 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 204
Query: 308 QLSATSRD 315
Q +D
Sbjct: 205 QGDGVPKD 212
>gi|414877264|tpg|DAA54395.1| TPA: hypothetical protein ZEAMMB73_819280, partial [Zea mays]
Length = 237
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A+WYLRAAEGG VRAMYN SLCYS+GEGL +A++W++ A DCGH K E G+ L
Sbjct: 1 AKWYLRAAEGGNVRAMYNISLCYSYGEGLAQDPVRAKRWLQLATDCGHKKTLYECGIKLC 60
Query: 276 T-------EGEMMKAVVYLELATRAG--ETAADHVKNVILQQLSATSRDRAMLV 320
G+ + V + A G E + + +++ LS RA+L+
Sbjct: 61 AVELLNPLNGDTLADVNTVGPAPNDGGAEGISCNFDRILMLILSLDLNSRALLL 114
>gi|410613424|ref|ZP_11324483.1| hypothetical protein GPSY_2760 [Glaciecola psychrophila 170]
gi|410167086|dbj|GAC38372.1| hypothetical protein GPSY_2760 [Glaciecola psychrophila 170]
Length = 671
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVR 193
Y++ A+ Y+QAA LGD ++Q N +A QA+ GH++
Sbjct: 494 YYQQQNYPEALYYYQQAAKLGDVSSQYLLGEMYQDAKGTEQNMRQAAAWYTQAAQQGHIK 553
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L +G GV+ + +A WY +AAE G++ A YN + YS G+G+ ++QA
Sbjct: 554 AQAILGFMYSKGNGVNQDYSQATIWYQKAAEQGHMNAQYNLAYLYSLGQGVIKDYQQAAH 613
Query: 254 WMKRAADCGHGKAQ------LEHGLGL 274
W +++A+ G AQ E GLG+
Sbjct: 614 WYQKSANQGDADAQNSLGKLYERGLGV 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ ++ +G +N+ +A + + A +G A G MY K Y QA +
Sbjct: 523 GEMYQDAKGTEQNMRQAAAWYTQAAQQGHIKAQAILGFMY---SKGNGVNQDYSQATIWY 579
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA+ GH+ AQY LA G+GV + Q+AA WY ++A G
Sbjct: 580 QKAAE----------------QGHMNAQYNLAYLYSLGQGVIKDYQQAAHWYQKSANQGD 623
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
A + Y G G+ + +A+ ++AA G+ AQL
Sbjct: 624 ADAQNSLGKLYERGLGVNIDLAKAKNLYQQAAAQGNQIAQLN 665
>gi|398850377|ref|ZP_10607083.1| TPR repeat-containing protein [Pseudomonas sp. GM80]
gi|398248914|gb|EJN34310.1| TPR repeat-containing protein [Pseudomonas sp. GM80]
Length = 443
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G GV KN +A+ + K A + + A G Y A+ YR+A
Sbjct: 233 GNSYANGEGVEKNAKQAVAWYYKAAVQDNVYAQTSLGFCYDNGYGIAQDNSVAVYWYRKA 292
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A EE G+ +AQY LA +G GVD + ++AA WY +AA
Sbjct: 293 A------------EE-----------GYAQAQYNLAFNYAQGTGVDQDFEQAAGWYRKAA 329
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-- 281
E G+ A N Y GEG+ + +QA W ++AA+ G AQL G+ L+ GE +
Sbjct: 330 EQGHAEAQNNLGASYERGEGVVQNIKQAVLWYRKAAEQGLATAQLNLGI-LYYNGEGVME 388
Query: 282 ---KAVVYLELATRAGETAADHVKNVILQQLS----ATSRDRAMLVVDSWR 325
+A ++ +A GE+ A ++ I +LS A +R A L + ++
Sbjct: 389 DKSQAYTWIAVAAANGESKAIKPRSEIADELSMSELAAARKLAELYYEKYQ 439
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK-KEA 155
+A G+ F +G G+ KN +A+ + A + A G Y +D+ ++
Sbjct: 153 DAYAQFSLGEHFDNGMGLVKNQQQAVALYHMAAGKDLAAAQNSLGNSYHNGTGVDQDQQK 212
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI Y +AA G AAQ A NA++AV Y+A++ +V AQ L C
Sbjct: 213 AIFWYNKAADQGFAAAQNALGNSYANGEGVEKNAKQAVAWYYKAAVQDNVYAQTSLGFCY 272
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G G+ + A WY +AAE GY +A YN + Y+ G G+ QA W ++AA+ G
Sbjct: 273 DNGYGIAQDNSVAVYWYRKAAEEGYAQAQYNLAFNYAQGTGVDQDFEQAAGWYRKAAEQG 332
Query: 263 HGKAQ 267
H +AQ
Sbjct: 333 HAEAQ 337
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+ A GDP+AQ +A++AV Y+A+I G +AQ L L G G
Sbjct: 38 RKLADEGDPSAQNHLGDIYADGLGVAEDAKQAVAWYYKAAIQGFAQAQSNLGYHLENGIG 97
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
++ N ++AA WY ++A G + + Y G G+ +A W +AA+ G AQ
Sbjct: 98 IEQNAEQAAGWYYKSAVQGLATGQMHLAYLYDQGVGVEKDVNKALTWYYKAAEQGDAYAQ 157
Query: 268 ------LEHGLGLFTEGEMMKAVVYL 287
++G+GL + A+ ++
Sbjct: 158 FSLGEHFDNGMGLVKNQQQAVALYHM 183
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQP-- 173
N D++L K A G A G +Y + + + A++ Y +AA+ G AQ
Sbjct: 29 NADQSLIEIRKLADEGDPSAQNHLGDIYADGLGVAEDAKQAVAWYYKAAIQGFAQAQSNL 88
Query: 174 -----------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
NAE+A Y++++ G Q LA +G GV+ ++ +A WY +A
Sbjct: 89 GYHLENGIGIEQNAEQAAGWYYKSAVQGLATGQMHLAYLYDQGVGVEKDVNKALTWYYKA 148
Query: 223 AEGGYVRAMYN----------------------------------TSLCYSF--GEGLPL 246
AE G A ++ SL S+ G G+
Sbjct: 149 AEQGDAYAQFSLGEHFDNGMGLVKNQQQAVALYHMAAGKDLAAAQNSLGNSYHNGTGVDQ 208
Query: 247 SHRQARKWMKRAADCGHGKAQ 267
++A W +AAD G AQ
Sbjct: 209 DQQKAIFWYNKAADQGFAAAQ 229
>gi|46446348|ref|YP_007713.1| hypothetical protein pc0714 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399989|emb|CAF23438.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 445
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKE-AAISLYRQA 163
G R+ +GRGV ++ +A+ + A +G A G MY W + + E AI Y+ A
Sbjct: 153 GVRYANGRGVTQSDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLA 212
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ A + EA K A+ GH AQY L + GRGV
Sbjct: 213 AEQGHADAQYALGFIYANGLGVTQSDAEAFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQ 272
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ QEA ++Y AA+ G+ A YN + Y G+G+ S ++A K+ K AAD G+ AQ
Sbjct: 273 SDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLAADQGYVDAQYNL 332
Query: 271 GLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
G+ ++ G + +A+ Y +LA G A +
Sbjct: 333 GV-RYSNGRGVMQSDQEAIKYYKLAADQGHAKAQY 366
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G R+ +GRGV ++ +A + A +G A + G+ Y M ++ A Y+ A
Sbjct: 261 GVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLA 320
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +EA+K A+ GH +AQY L + GRGV
Sbjct: 321 ADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQ 380
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ QEA ++Y AA+ G +A YN Y+ G G+ S ++A K+ K AAD GH AQ E
Sbjct: 381 SEQEATKYYKLAADQGDAKAQYNLGARYANGRGVTQSEQEAAKYYKLAADQGHADAQYE 439
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA+K A+ GH AQY L + GRGV + QEA ++Y AAE G+ A Y
Sbjct: 132 EAIKYFKLAAKQGHADAQYNLGVRYANGRGVTQSDQEAIKYYKLAAEQGHADAQYALGFM 191
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y+ G+ S ++A K+ K AA+ GH AQ G GL +A Y +LA
Sbjct: 192 YANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAEAFKYFKLAAEQ 251
Query: 294 GETAADH 300
G A +
Sbjct: 252 GHANAQY 258
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 132 AARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAAQP------ANA----- 176
A +G A GLMY E + + +A AI ++ AA G AQ AN
Sbjct: 105 ADQGDAKAQYKLGLMYDESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGRGVTQ 164
Query: 177 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+EA+K A+ GH AQY L G+ + QEA ++Y AAE G+ A Y
Sbjct: 165 SDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYAL 224
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y+ G G+ S +A K+ K AA+ GH AQ G+
Sbjct: 225 GFIYANGLGVTQSDAEAFKYFKLAAEQGHANAQYNLGV 262
>gi|113680603|ref|NP_001038629.1| protein sel-1 homolog 1 precursor [Danio rerio]
Length = 776
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G+T AM G MY E + E A+ +++AA LG+
Sbjct: 370 GRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKAADLGN 429
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 430 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQA 489
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++ G++ A YN + ++ G G+ S A + K + G +L F
Sbjct: 490 LKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMAAYRSF 549
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLS 310
EG+M A++ YL LA + E A +V V+ Q+ S
Sbjct: 550 KEGDMDSALIQYLLLAEQGYEVAQSNVAFVLDQKGS 585
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW E+A++ YR
Sbjct: 245 GFLYAAGLGVNSSQAKALVYYTFGALGGNLVAHMILGYRYWGGVGVPQSCESALTHYRLV 304
Query: 164 A--VLGDPAAQPANAEEAVKLL-------------------YQASIA--GHVRAQYQLA- 199
A V D + +A + ++LL Y +A G V+AQ L
Sbjct: 305 ANHVASDVSLTGGSAVQRIRLLDEVENPGSSSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 364
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G E +P ++ A + K+A
Sbjct: 365 LHLHGGRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKA 424
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 425 ADLGNPVGQ--SGLGM 438
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV N D AL F K A +G + G MY+ I + R
Sbjct: 437 GMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYN------GIGVKR------ 484
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
+ ++A+K AS AGH+ A Y LA G GV + A + E G
Sbjct: 485 -------DYKQALKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERG 536
>gi|329848146|ref|ZP_08263174.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328843209|gb|EGF92778.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR F G GV +N KAL + K A +G+ +A + G++Y
Sbjct: 57 LRLADNFFSGNGVDQNYGKALAWYEKAALQGNVVAQTELGVLY----------------- 99
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
G + ++A++ A+ G+ AQY L + G GV ++ A WYL+AAE
Sbjct: 100 --GKGLGVAVDYDKALRWTRMAADKGYAGAQYNLGVAYDYGMGVTPDVAMAFAWYLKAAE 157
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
GY A +N Y GEG+ S+ QA W RAAD + AQ G+ L+ EG+
Sbjct: 158 QGYGVAQFNVGTMYESGEGVEQSNPQAFTWYARAADQAYAPAQYNLGV-LYLEGK 211
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG AQ +LA G GVD N +A WY +AA G V A + Y G G+ + +
Sbjct: 50 AGDAEAQLRLADNFFSGNGVDQNYGKALAWYEKAALQGNVVAQTELGVLYGKGLGVAVDY 109
Query: 249 RQARKWMKRAADCGHGKAQLEHGL 272
+A +W + AAD G+ AQ G+
Sbjct: 110 DKALRWTRMAADKGYAGAQYNLGV 133
>gi|425744134|ref|ZP_18862195.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
gi|425491935|gb|EKU58212.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--- 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKFDQKKALELFEKSAQLGSSNAMLQLGLIYQYGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVR 193
E KK+ A+ + + A G+P+A + +A +++ +G ++
Sbjct: 105 EAVKKDDQKALMWFEEGAKKGNPSAIHNVGLAYYKGLSVKQDRAKAFTYFIRSAESGLIQ 164
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
+Q +A L+ G GV+ +++ + +W L+AAE G + + N L Y GEG+ QA
Sbjct: 165 SQTVVAAQLYGGDGVEKDIKASFKWILKAAEQGDLESQNNVGLAYERGEGVEQDPLQALV 224
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAA 298
W KRAAD GH AQ L + M + ++ Y E+A R G +A
Sbjct: 225 WFKRAADHGHSLAQYNTALKYYNGAGMKQNLDESIRYAEMAVRNGNPSA 273
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 98 LREAMVLLRWGKRFKHG-RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MD 151
L + +L+ G +++G V+K+ KAL F +GA +G+ A+ + GL Y++ D
Sbjct: 87 LGSSNAMLQLGLIYQYGNEAVKKDDQKALMWFEEGAKKGNPSAIHNVGLAYYKGLSVKQD 146
Query: 152 KKEAAISLYRQA--------AVL------GDPAAQPANAEEAVKLLYQASIAGHVRAQYQ 197
+ +A R A V+ GD + A + K + +A+ G + +Q
Sbjct: 147 RAKAFTYFIRSAESGLIQSQTVVAAQLYGGDGVEKDIKA--SFKWILKAAEQGDLESQNN 204
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ L RG GV+ + +A W+ RAA+ G+ A YNT+L Y G G+ + ++ ++ +
Sbjct: 205 VGLAYERGEGVEQDPLQALVWFKRAADHGHSLAQYNTALKYYNGAGMKQNLDESIRYAEM 264
Query: 258 AADCGHGKAQ 267
A G+ A+
Sbjct: 265 AVRNGNPSAK 274
>gi|148359764|ref|YP_001250971.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296107809|ref|YP_003619510.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila 2300/99 Alcoy]
gi|148281537|gb|ABQ55625.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila str. Corby]
gi|295649711|gb|ADG25558.1| TPR repeat protein, protein-protein interaction [Legionella
pneumophila 2300/99 Alcoy]
Length = 375
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 24/220 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV +N D A+ + K A +G++ A + G Y + DK +A ++ Y +
Sbjct: 130 GYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA-LNWYAK 188
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+ +AQ P + ++A + +A+ H ++Q +L G+
Sbjct: 189 AADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQDHAKSQLELGYLYDSGKLGK 248
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+LQ+AA WY ++A+ G A +N + Y +G+G+ S Q+ WM++AA+ G+GKAQ +
Sbjct: 249 SDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQ 308
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 304
G+ G+ + +KA + A G E AA + ++
Sbjct: 309 LGVYYRDGIGVAADPIKAYAWFTAAKNNGFEKAASNASDL 348
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 79/203 (38%), Gaps = 31/203 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + + +GV N +K L A +G+ A V YW ++ + Y++A
Sbjct: 59 GKMYYNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPDG----YKKAFEWY 114
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NA+ QY L G GV N A WY +AAE G
Sbjct: 115 QKAADQNNAD----------------GQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGN 158
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A Y G G+ QA W +AAD G+ AQ GL ++ +G + K
Sbjct: 159 SNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGL-MYEQGDGVPKDYQK 217
Query: 283 AVVYLELATRAGETAADHVKNVI 305
A Y E A DH K+ +
Sbjct: 218 AAEYFEKAAN-----QDHAKSQL 235
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN--------------- 211
G+ A E+A LL + G +AQY L + +GV +N
Sbjct: 27 GEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLASANQG 86
Query: 212 --------------------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++A WY +AA+ Y Y G G+P + A
Sbjct: 87 NVDAQVLLAGFYWYLNTPDGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTA 146
Query: 252 RKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W K+AA+ G+ A L G G + + +A+ + A G +A + ++ +
Sbjct: 147 MVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYE 206
Query: 308 QLSATSRD 315
Q +D
Sbjct: 207 QGDGVPKD 214
>gi|71281812|ref|YP_269127.1| hypothetical protein CPS_2411 [Colwellia psychrerythraea 34H]
gi|71147552|gb|AAZ28025.1| conserved domain protein [Colwellia psychrerythraea 34H]
Length = 235
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GV+++ KA+D + K A +G+ ++Y + G
Sbjct: 57 GYMYTKGKGVKQDYTKAVDWYRKAAEQGNARDQYSLAIIYEK-----------------G 99
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AQ N +A++ +A+ G+ R+QY LAL + G+GV + ++A +WY +AAE G
Sbjct: 100 RGVAQDYN--QAIEWHTKAAEQGNPRSQYHLALIYYNGKGVTQDYKQALKWYSKAAEDGN 157
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
Y+ + Y G+G+ ++QA W +AA+ G KAQ GL L+ +G+ + A
Sbjct: 158 AGVQYSLGVMYENGQGVAQDYKQAFDWYSKAAEQGDAKAQYNLGL-LYADGKGITA 212
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + N +A+ L +A+ G +AQ L +G+GV + +A WY +AAE G
Sbjct: 25 GKEAYKNNNYPQAITLFNKAAGQGSAKAQSYLGYMYTKGKGVKQDYTKAVDWYRKAAEQG 84
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMM 281
R Y+ ++ Y G G+ + QA +W +AA+ G+ ++Q L ++ G +
Sbjct: 85 NARDQYSLAIIYEKGRGVAQDYNQAIEWHTKAAEQGNPRSQYHLAL-IYYNGKGVTQDYK 143
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+A+ + A G + V+ + ++D
Sbjct: 144 QALKWYSKAAEDGNAGVQYSLGVMYENGQGVAQD 177
>gi|284006617|emb|CBA71878.1| hypothetical protein containing Sel1 repeats [Arsenophonus
nasoniae]
Length = 260
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 20/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+++ G+G+ ++ +++ +LK A G+ A +R A +
Sbjct: 50 GEKYFRGQGISQDFKQSVVWYLKSAELGNADAQ-------------------FRLATMYV 90
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N ++A++ +A+I HVRAQ +A G GV NL EAA W+ +A++GGY
Sbjct: 91 NGFGVRRNYDQAIEWYQRAAIQQHVRAQSNMATMYAHGLGVKRNLPEAAYWFEQASKGGY 150
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A +N L YS G G+ +++A W K AA G+ KAQ G+ ++ EG
Sbjct: 151 ALAQFNLGLMYSIGNGVIKDYKKAVYWFKHAAKQGYAKAQDRLGV-MYAEG 200
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L A R + +G GVR+N D+A++ + + A + A + MY
Sbjct: 76 LGNADAQFRLATMYVNGFGVRRNYDQAIEWYQRAAIQQHVRAQSNMATMY---------- 125
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
A LG P EA QAS G+ AQ+ L L G GV + ++A
Sbjct: 126 -----AHGLGVKRNLP----EAAYWFEQASKGGYALAQFNLGLMYSIGNGVIKDYKKAVY 176
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-LG-LF 275
W+ AA+ GY +A + Y+ G G+ +++A W+ AA G+ ++Q H +G LF
Sbjct: 177 WFKHAAKQGYAKAQDRLGVMYAEGHGVNKDNKKAYAWLATAACNGNKESQKFHDKIGKLF 236
Query: 276 TEGEMMKA 283
+ EM A
Sbjct: 237 SVKEMKAA 244
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ L Q + G+ +AQY+L RG+G+ + +++ WYL++AE G A + + Y
Sbjct: 31 ITQLQQLAEQGNDKAQYELGEKYFRGQGISQDFKQSVVWYLKSAELGNADAQFRLATMYV 90
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRA 293
G G+ ++ QA +W +RAA H +AQ HGLG+ + + +A + E A++
Sbjct: 91 NGFGVRRNYDQAIEWYQRAAIQQHVRAQSNMATMYAHGLGV--KRNLPEAAYWFEQASKG 148
Query: 294 G 294
G
Sbjct: 149 G 149
>gi|222056239|ref|YP_002538601.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221565528|gb|ACM21500.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 171
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EA+K L +++ G VRAQY L + +G GV ++ AA+WY RAAE G+ ++ +N
Sbjct: 70 NKTEALKWLQRSAEKGLVRAQYNLGMMYDKGDGVARDMAAAAKWYRRAAEKGHAQSQFNL 129
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L Y+ GEG+ ++A KW+++AA GHGKA+
Sbjct: 130 GLMYTNGEGVEKDKQEAMKWLRKAARQGHGKAR 162
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 155 AAISLYRQAAVLGDPAAQPANAEEAV-KLLYQASIA-----GHVRAQYQLALCLHRGRGV 208
AA+ L V+G A +A + YQ ++ G A Y L++ RG GV
Sbjct: 8 AAVCLILCCTVVGTAGADFKTGLDAYQRKEYQTALKELKADGGADASYVLSVMYFRGEGV 67
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ N EA +W R+AE G VRA YN + Y G+G+ A KW +RAA+ GH ++Q
Sbjct: 68 EPNKTEALKWLQRSAEKGLVRAQYNLGMMYDKGDGVARDMAAAAKWYRRAAEKGHAQSQF 127
Query: 269 EHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQ 308
GL ++T GE + +A+ +L A R G A + V+ ++
Sbjct: 128 NLGL-MYTNGEGVEKDKQEAMKWLRKAARQGHGKARKLLKVMSEK 171
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G GV N +AL + A +G A + G+MY DK GD A+
Sbjct: 64 GEGVEPNKTEALKWLQRSAEKGLVRAQYNLGMMY---DK--------------GDGVARD 106
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A A K +A+ GH ++Q+ L L G GV+ + QEA +W +AA G+ +A
Sbjct: 107 MAA--AAKWYRRAAEKGHAQSQFNLGLMYTNGEGVEKDKQEAMKWLRKAARQGHGKA 161
>gi|290984619|ref|XP_002675024.1| predicted protein [Naegleria gruberi]
gi|284088618|gb|EFC42280.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G R+ G GV K+ +KAL+ + K AA+G+T A G MY + + E A Y+ A
Sbjct: 116 GDRYYSGDGVEKSFEKALEWYRKAAAQGNTTAQFHIGKMYEKGEGVPISPEKAFVWYKTA 175
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LGD AAQ + + A + + +++ + A+Y L + G GV+
Sbjct: 176 AQLGDAAAQHQTGKMYFWGFGVEKSNDLAFEWISKSANQEYSHAEYDLGNLYYEGNGVEQ 235
Query: 211 NLQEAARWYLRAAEGG--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+L +A +WY +AA G YV+ + Y GEG+ S+ +A +W ++AA+ G AQ
Sbjct: 236 SLTDAFKWYEKAANQGDAYVQNL--IGAMYQEGEGVAQSYSKAFEWYEKAANQGEVNAQF 293
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ +L + G GV+ + ++A WY +AA G A ++ Y GEG+P
Sbjct: 103 AANDGDNEAQTKLGDRYYSGDGVEKSFEKALEWYRKAAAQGNTTAQFHIGKMYEKGEGVP 162
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+S +A W K AA G AQ + G F
Sbjct: 163 ISPEKAFVWYKTAAQLGDAAAQHQTGKMYF 192
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+A++ +A+ G+ AQ+ + +G GV + ++A WY AA+ G A + T
Sbjct: 130 EKALEWYRKAAAQGNTTAQFHIGKMYEKGEGVPISPEKAFVWYKTAAQLGDAAAQHQTGK 189
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELAT 291
Y +G G+ S+ A +W+ ++A+ + A+ + G L+ EG + A + E A
Sbjct: 190 MYFWGFGVEKSNDLAFEWISKSANQEYSHAEYDLG-NLYYEGNGVEQSLTDAFKWYEKAA 248
Query: 292 RAGETAADHVKNVI 305
G+ +V+N+I
Sbjct: 249 NQGDA---YVQNLI 259
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W L +A + GK + G GV K+ D A + K A + + A D G +Y+E
Sbjct: 171 WYKTAAQLGDAAAQHQTGKMYFWGFGVEKSNDLAFEWISKSANQEYSHAEYDLGNLYYEG 230
Query: 151 DKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ E +++ +A K +A+ G Q + G GV
Sbjct: 231 NGVEQSLT-------------------DAFKWYEKAANQGDAYVQNLIGAMYQEGEGVAQ 271
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ +A WY +AA G V A ++ +L Y EG+ S+ ++ +++ A AQ+
Sbjct: 272 SYSKAFEWYEKAANQGEVNAQFHLALLYQ-EEGVHQSYEKSYNLLEKLASSNDKDAQI 328
>gi|290970862|ref|XP_002668285.1| predicted protein [Naegleria gruberi]
gi|284081597|gb|EFC35541.1| predicted protein [Naegleria gruberi]
Length = 748
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 95 LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE 154
L P ++ VL + G G KN+D L+ FLK A G A + G++Y E +
Sbjct: 588 LMPTEDSEVLFNLAYCYYQGFGTEKNIDLGLELFLKAAENGHIAAQYNIGMIYLEKQDYQ 647
Query: 155 AAISLYRQAAVLGDPAA--QPA------------NAEEAVKLLYQASIAGHVRAQYQLAL 200
A ++Q V DP + Q A + +A +L +++ GH +AQY LAL
Sbjct: 648 KAFEWFKQCEVHNDPNSLFQYALFYYNGSHIVEKDYTKAFELFLRSAEQGHAQAQYNLAL 707
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
+G G+D + +A W+L+++E G V Y
Sbjct: 708 LYFKGIGIDQDYSKAKEWFLKSSENGLVEESY 739
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 23/147 (15%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
FLK A +G A + G++Y E D+ D + + + E+A +++
Sbjct: 439 FLKSAEQGYADAQFNLGVVY-ETDQ-------------FVDESERRSQLEQAFIWYMKSA 484
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
GH AQ LA GRGV+ + + WY ++AE G+V + +N +L L L
Sbjct: 485 EQGHANAQGYLAQLYEYGRGVERDYSKTIEWYTKSAEQGFVSSQFNLALM------LHLY 538
Query: 248 HRQARK---WMKRAADCGHGKAQLEHG 271
R A WM +AA+ GH AQ G
Sbjct: 539 ERDAETAFYWMGKAAENGHTDAQFNLG 565
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 15/193 (7%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------- 172
++K + KGA G+ G++Y+ A Y Q+A G AQ
Sbjct: 368 IEKTKEELEKGAKEGNADDQNRLGVLYYNEKDISNAAFWYDQSAKQGHGKAQFNLGLLYY 427
Query: 173 -PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN-----LQEAARWYLRAAEGG 226
+ E A +++ G+ AQ+ L + + VD + L++A WY+++AE G
Sbjct: 428 MNSLMEPAKHWFLKSAEQGYADAQFNLGVVYETDQFVDESERRSQLEQAFIWYMKSAEQG 487
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEGEMMKAVV 285
+ A + Y +G G+ + + +W ++A+ G +Q L L E + A
Sbjct: 488 HANAQGYLAQLYEYGRGVERDYSKTIEWYTKSAEQGFVSSQFNLALMLHLYERDAETAFY 547
Query: 286 YLELATRAGETAA 298
++ A G T A
Sbjct: 548 WMGKAAENGHTDA 560
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 22/173 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++GRGV ++ K ++ + K A +G + + LM + LY +
Sbjct: 499 YEYGRGVERDYSKTIEWYTKSAEQGFVSSQFNLALM----------LHLYER-------- 540
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+AE A + +A+ GH AQ+ L +G G + + +
Sbjct: 541 ----DAETAFYWMGKAAENGHTDAQFNLGWLYLKGIGTVKDYSKGFEILSKLMPTEDSEV 596
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
++N + CY G G + + +AA+ GH AQ G+ + + KA
Sbjct: 597 LFNLAYCYYQGFGTEKNIDLGLELFLKAAENGHIAAQYNIGMIYLEKQDYQKA 649
>gi|114797087|ref|YP_759395.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
15444]
gi|114737261|gb|ABI75386.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
15444]
Length = 1238
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+ LL +A++ G AQY L +G GVD ++ +A +AAE G+V AMY+ +L
Sbjct: 1002 AIPLLRRAALKGAAPAQYDLGKLYEQGIGVDQDMIQARSLISKAAEAGHVGAMYDLALFM 1061
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
+ GEG L A +W ++AAD G AQ G+ G+ E ++ +A+ + ELA+R G
Sbjct: 1062 AEGEGGELDDLGAVEWFRKAADHGFLDAQYNLGVMFAEGIGAEQDLAEALYWFELASRQG 1121
Query: 295 ETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSL 330
++ A + +L + M D W PS+
Sbjct: 1122 DSGATLEVRSLSSRLPPETVREVMETADLWSETPSI 1157
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
+ +LD A+ + A +G+ A D G +Y E I + +
Sbjct: 995 TQNDLDSAIPLLRRAALKGAAPAQYDLGKLY------EQGIGVDQDMI------------ 1036
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+A L+ +A+ AGHV A Y LAL + G G + + A W+ +AA+ G++ A YN +
Sbjct: 1037 -QARSLISKAAEAGHVGAMYDLALFMAEGEGGELDDLGAVEWFRKAADHGFLDAQYNLGV 1095
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
++ G G +A W + A+ G A LE
Sbjct: 1096 MFAEGIGAEQDLAEALYWFELASRQGDSGATLE 1128
>gi|384500587|gb|EIE91078.1| hypothetical protein RO3G_15789 [Rhizopus delemar RA 99-880]
Length = 623
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
E++ G ++ G GV KN KA+ + A +G+ A G Y + DK
Sbjct: 210 ESVAAYNIGYCYEDGIGVVKNPGKAVSWYKLAADQGNAFAQNSLGYCYEDGIGIKQDKAM 269
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
AA YR++A G AQ + + QA+ GH RAQ+ L C
Sbjct: 270 AAF-WYRRSAEQGYIWAQCNLGYCYQNGIGIDKDVVQGAYWYSQAATQGHARAQHNLGFC 328
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV +L+ A WY +AAE G + A ++ CY G G+ R++ W KR+A+
Sbjct: 329 YQNGIGVTKDLKMAIFWYKKAAEQGNIFAYHSLGYCYQNGLGVTADQRESFFWYKRSAES 388
Query: 262 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
H AQL G G+ E +AV + L+ A + ++ +D
Sbjct: 389 NHAPAQLSLGFCYRNGIGVEKNEKEAVKWFRLSATQDNALAQNSLGFCYEEGIGIDKDPK 448
Query: 318 MLV 320
M V
Sbjct: 449 MAV 451
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++G GV K+L A+ + K A +G+ A G Y D++E+ R
Sbjct: 326 GFCYQNGIGVTKDLKMAIFWYKKAAEQGNIFAYHSLGYCYQNGLGVTADQRESFFWYKRS 385
Query: 163 AAVLGDPA------------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A PA N +EAVK ++ + AQ L C G G+D
Sbjct: 386 AESNHAPAQLSLGFCYRNGIGVEKNEKEAVKWFRLSATQDNALAQNSLGFCYEEGIGIDK 445
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + A WY+RAA+ A N CY+ G G+P + +A W +AA H +AQ +
Sbjct: 446 DPKMAVYWYMRAAKQNNPWAQCNLGFCYANGIGVPGNQAKAVYWYHKAAQQNHARAQDKL 505
Query: 271 GLGL 274
G+ L
Sbjct: 506 GVHL 509
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLY 160
L G +++G GV KN +A+ F A + + LA G Y E +DK + A+ Y
Sbjct: 395 LSLGFCYRNGIGVEKNEKEAVKWFRLSATQDNALAQNSLGFCYEEGIGIDKDPKMAVYWY 454
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+AA +P AQ P N +AV ++A+ H RAQ +L + L G G
Sbjct: 455 MRAAKQNNPWAQCNLGFCYANGIGVPGNQAKAVYWYHKAAQQNHARAQDKLGVHLQAGTG 514
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
NL A R++ AA+ G V A Y+ ++CY G G+ + +A KW + A+
Sbjct: 515 CRQNLALAVRYFRLAAQQGQVAAQYHLAMCYEKGLGVERNLHEALKWFESAS 566
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 31/222 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G + G GV KN +A + + A +G+ G Y E ++K E A+ YR A
Sbjct: 146 GTCYYDGIGVSKNEHEAFRWYKRSAKQGNCRGQSILGYCYGEGYGVEKNETVAVEWYRLA 205
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A G+ A Y + C G GV N +A WY AA
Sbjct: 206 ATQGESVAA-----------------------YNIGYCYEDGIGVVKNPGKAVSWYKLAA 242
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGE 279
+ G A + CY G G+ A W +R+A+ G+ AQ G G+ + +
Sbjct: 243 DQGNAFAQNSLGYCYEDGIGIKQDKAMAAFWYRRSAEQGYIWAQCNLGYCYQNGIGIDKD 302
Query: 280 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
+++ + A G A H Q ++D M +
Sbjct: 303 VVQGAYWYSQAATQGHARAQHNLGFCYQNGIGVTKDLKMAIF 344
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
QY L C + G GV N EA RWY R+A+ G R CY G G+ + A +
Sbjct: 141 GQYCLGTCYYDGIGVSKNEHEAFRWYKRSAKQGNCRGQSILGYCYGEGYGVEKNETVAVE 200
Query: 254 WMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W + AA G A E G+G+ KAV + +LA G A + +
Sbjct: 201 WYRLAATQGESVAAYNIGYCYEDGIGVVK--NPGKAVSWYKLAADQGNAFAQNSLGYCYE 258
Query: 308 QLSATSRDRAM 318
+D+AM
Sbjct: 259 DGIGIKQDKAM 269
>gi|344925543|ref|ZP_08779004.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 856
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 19/171 (11%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ- 172
++ D+A+ + A +GS A G+ Y + + KEA + LYR AA G AQ
Sbjct: 642 RDADQAVKWYKCAAKQGSVEAQFWLGVCYDLGVGIKQNYKEA-VKLYRLAAEKGHEGAQL 700
Query: 173 ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
N +EAVK A+ G++ Q+ L G+GV NL++A +WY+
Sbjct: 701 NLSTCYHEGTGVERNYKEAVKWCKLAAKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYM 760
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
RAAE G+ + YN +C+ G+G+ H +A KW +RAA+ G A E G
Sbjct: 761 RAAEQGHSESQYNVGICFYEGQGVTRDHHEAVKWYRRAAEQGDSDAYCELG 811
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 119 KNLD--KALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAAQ 172
+NLD +AL+ A RG A G Y++ M + + A+ Y+ AA G AQ
Sbjct: 604 RNLDLGEALEWLKGNAERGLMNAQSSLGDWYYQNILMPRDADQAVKWYKCAAKQGSVEAQ 663
Query: 173 -------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
N +EAVKL A+ GH AQ L+ C H G GV+ N +EA +W
Sbjct: 664 FWLGVCYDLGVGIKQNYKEAVKLYRLAAEKGHEGAQLNLSTCYHEGTGVERNYKEAVKWC 723
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
AA+ G + ++ Y G+G+ + R+A KW RAA+ GH ++Q G+ F EG+
Sbjct: 724 KLAAKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYMRAAEQGHSESQYNVGI-CFYEGQ 782
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K G+G N +A++ F A G A V G Y E
Sbjct: 452 GIMYKEGQGGEVNHLEAINWFKSAANNGCAPAFVKLGNYYSE------------------ 493
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ A Q N AVK A+ G QY A + G+GV + EAA+WY RAA G
Sbjct: 494 EGAFQDLNV--AVKYYKLAAEHGEKWGQYNFANLYYLGKGVKQDYTEAAKWYKRAALQGI 551
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
A +N +CY G+G+ + ++A KW +RAAD
Sbjct: 552 ASAQFNMGVCYEQGQGVAQNIKKAEKWYRRAAD 584
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G G+++N +A+ + A +G A ++ Y E E A+ + A
Sbjct: 667 GVCYDLGVGIKQNYKEAVKLYRLAAEKGHEGAQLNLSTCYHEGTGVERNYKEAVKWCKLA 726
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ A Q N +A K +A+ GH +QY + +C + G+GV
Sbjct: 727 AKQGNIACQHDLGHYYDVGQGVTKNLRKAFKWYMRAAEQGHSESQYNVGICFYEGQGVTR 786
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ EA +WY RAAE G A CY +G G+P +A K+ + AA
Sbjct: 787 DHHEAVKWYRRAAEQGDSDAYCELGHCYIYGHGVPRDLAEALKYYRMAA 835
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 161 RQAAVLG-DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
R A+L D A A++ + +K A+ G +AQ LA ++G+ + + EA +WY
Sbjct: 377 RNLAILYRDSLASIASSTKMIKWCSLAAEQGDTQAQTMLASFYYQGKFIARDYSEARKWY 436
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 278
AA G A + + Y G+G ++H +A W K AA+ G A ++ G EG
Sbjct: 437 QLAAVSGDAEAQFWLGIMYKEGQGGEVNHLEAINWFKSAANNGCAPAFVKLGNYYSEEGA 496
Query: 279 --EMMKAVVYLELATRAGE 295
++ AV Y +LA GE
Sbjct: 497 FQDLNVAVKYYKLAAEHGE 515
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
I L+ +A+ + + + +AV+ A+ + AQ L C +G GV +L +A
Sbjct: 302 IGLHLKASNISSLSVKEKLHTQAVEFFSLAAENNCLEAQSNLGYCYVKGEGVPLDLMQAK 361
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+W AA+ G+ A N ++ Y S + KW AA+ G +AQ
Sbjct: 362 KWLRAAAKQGFAPAQRNLAILYRDSLASIASSTKMIKWCSLAAEQGDTQAQ 412
>gi|384490648|gb|EIE81870.1| hypothetical protein RO3G_06575 [Rhizopus delemar RA 99-880]
Length = 484
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
E++ + G ++ G G+ KN+ +A+ + A +G+ L G Y + E
Sbjct: 120 ESVAMYNLGYCYEEGFGLEKNMGEAIRWYRLSAEQGNALGQNSLGYCYEDGIGVAANFEE 179
Query: 156 AISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y+ +A G P A+ + + +A++ GH RAQ+ L CL
Sbjct: 180 AVKWYKLSAEQGYPWAECNLGYCYQNGIGLIKDETQGAYWYKKAALQGHARAQHNLGFCL 239
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G G + + +EA +WY RAA+ G + A ++ CY G G+ ++ +++ W +A+
Sbjct: 240 QNGIGTERDEKEAVKWYRRAADRGNIFAYHSLGYCYQNGVGVEVNKQESFFWYYLSAEEN 299
Query: 263 HGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
H AQL G G+ E +A+++ + G A + ++ T +D
Sbjct: 300 HPPAQLSLGYCYRNGIGVEKNEARAIIWFRKSAELGNALAQNSLGFCFEEGIGTEKD 356
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 161 RQAAVLGDPAAQPANAE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
R ++LG Q E EA+K ++ G A Y L C G G++ N+ EA
Sbjct: 86 RGQSILGYCYGQGLGVERDQVEAIKWYRLSADQGESVAMYNLGYCYEEGFGLEKNMGEAI 145
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEH 270
RWY +AE G + CY G G+ + +A KW K +A+ G+ A+ ++
Sbjct: 146 RWYRLSAEQGNALGQNSLGYCYEDGIGVAANFEEAVKWYKLSAEQGYPWAECNLGYCYQN 205
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+GL + E A Y + A + G A H LQ T RD V
Sbjct: 206 GIGLIKD-ETQGAYWYKKAALQ-GHARAQHNLGFCLQNGIGTERDEKEAV 253
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 156 AISLYRQAA---VLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
A ++YR A VLG D A +AE A + ++ GH R Q L C +G GV
Sbjct: 42 AATIYRHPAAQYVLGICYHDGIALQKDAEVAFQWYKLSAEQGHARGQSILGYCYGQGLGV 101
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 267
+ + EA +WY +A+ G AMYN CY G GL + +A +W + +A+ G+ Q
Sbjct: 102 ERDQVEAIKWYRLSADQGESVAMYNLGYCYEEGFGLEKNMGEAIRWYRLSAEQGNALGQN 161
Query: 268 -----LEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
E G+G+ E +AV + +L+ G A+
Sbjct: 162 SLGYCYEDGIGVAANFE--EAVKWYKLSAEQGYPWAE 196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++G G ++ +A+ + + A RG+ A G Y E++K+E+ Y A
Sbjct: 239 LQNGIGTERDEKEAVKWYRRAADRGNIFAYHSLGYCYQNGVGVEVNKQESFFWYYLSAEE 298
Query: 166 LGDPA------------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
PA N A+ +++ G+ AQ L C G G + + +
Sbjct: 299 NHPPAQLSLGYCYRNGIGVEKNEARAIIWFRKSAELGNALAQNSLGFCFEEGIGTEKDPK 358
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
AA WY ++A+ A N CY+ G G+ ++++ W ++AA HG+A
Sbjct: 359 SAAYWYHKSAQQNNPWAQCNLGFCYANGFGVEKDNKKSVAWYRKAAAQNHGRA 411
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G +++G GV KN +A+ F K A G+ LA G + E D K AA Y +
Sbjct: 308 GYCYRNGIGVEKNEARAIIWFRKSAELGNALAQNSLGFCFEEGIGTEKDPKSAAY-WYHK 366
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A +P AQ + +++V +A+ H RA +L L L G GV+
Sbjct: 367 SAQQNNPWAQCNLGFCYANGFGVEKDNKKSVAWYRKAAAQNHGRALDKLGLHLLNGLGVE 426
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
NL+EA + + +AAE Y A+Y+ CY G G + +A W +RA+
Sbjct: 427 RNLEEAFKMFTKAAEQKYTPALYHLGNCYEKGLGCNIDLAKAMSWFERAS 476
>gi|429964801|gb|ELA46799.1| hypothetical protein VCUG_01699 [Vavraia culicis 'floridensis']
Length = 585
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK 153
+ + + G ++ G+G KN+ A + + A G+ A G Y E +
Sbjct: 197 MNDPVATYNMGFCYEEGKGTVKNMKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGAYKDE 256
Query: 154 EAAISLYRQAAVLGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLAL 200
A +LYR++A+ G P AQ A +++ + +A+I G RAQ+ L
Sbjct: 257 NKAFTLYRESALQGYPWAQSNLAYCFQQGIGVDKDLKKSFEWYERAAIQGLSRAQHNLGH 316
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
C H+G G D N+ EA WY RAA+ + A ++ CY GEG+P R+A ++ K AA
Sbjct: 317 CYHQGMGTDKNVTEAVMWYRRAAKQKNLYAFHSLGNCYQNGEGVPKDEREAVRYYKLAA 375
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 35/257 (13%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
++++ A +LR +W + L + G + GVR+ ++++ +
Sbjct: 96 IDRLEAQILQNKLRTIGSASVAWLEKAAKLGNSYAQYCLGTCYHDALGVRRCTKRSIEWY 155
Query: 129 LKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAAQPANAEEAVKLLY 184
+ AA+ + A+ G Y E ++K E A +LY QAA + DP A
Sbjct: 156 TRSAAQRNPCAIGVLGFCYLEGFGVEKNEHRAFALYLQAARMNDPVAT------------ 203
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
Y + C G+G N++ A WY RAAE G A + CY G G
Sbjct: 204 -----------YNMGFCYEEGKGTVKNMKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGA 252
Query: 245 PLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+A + +A G+ AQ + G+G+ + ++ K+ + E A G + A
Sbjct: 253 YKDENKAFTLYRESALQGYPWAQSNLAYCFQQGIGV--DKDLKKSFEWYERAAIQGLSRA 310
Query: 299 DHVKNVILQQLSATSRD 315
H Q T ++
Sbjct: 311 QHNLGHCYHQGMGTDKN 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G G ++N++ A+ + K A + A + G +Y+E I +
Sbjct: 426 YEEGYGTKRNIEFAIMWYTKSANANNPWAQTNLGTIYFE------GIHV----------- 468
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + E++V A+ GH RA +L C G V N A +Y +A E GY RA
Sbjct: 469 --PMDREKSVYYFKLAANQGHSRAYSKLGYCYEEGIVVHKNPSIAFSYYNKATEQGYNRA 526
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
Y CY G G+ + QA + + + G
Sbjct: 527 YYALGRCYERGFGIDFNMNQALSYFYKGSFYG 558
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM------YWEMDKK 153
E++ +L + F G GV +N+ KA ++ +++ S LA+V + +D+
Sbjct: 42 ESLAILSFCYEF--GIGVHRNIKKAEYGYMISSSKNSGLALVRLTFLRKFGRPSVRIDRL 99
Query: 154 EA-------------AISLYRQAAVLGDPAAQPA-----NAEEAVKLLYQASIAGHVRAQ 195
EA +++ +AA LG+ AQ + V+ + SI + R+
Sbjct: 100 EAQILQNKLRTIGSASVAWLEKAAKLGNSYAQYCLGTCYHDALGVRRCTKRSIEWYTRSA 159
Query: 196 YQ--------LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
Q L C G GV+ N A YL+AA A YN CY G+G +
Sbjct: 160 AQRNPCAIGVLGFCYLEGFGVEKNEHRAFALYLQAARMNDPVATYNMGFCYEEGKGTVKN 219
Query: 248 HRQARKWMKRAADCGHGKAQ------LEHGLGLFTE 277
+ A W KRAA+ G+ AQ E GLG + +
Sbjct: 220 MKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGAYKD 255
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAA-- 164
F+ G GV K+L K+ + + + A +G + A + G Y + DK A+ YR+AA
Sbjct: 282 FQQGIGVDKDLKKSFEWYERAAIQGLSRAQHNLGHCYHQGMGTDKNVTEAVMWYRRAAKQ 341
Query: 165 -------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
LG+ P + EAV+ A++ V + L+ C G GVD N
Sbjct: 342 KNLYAFHSLGNCYQNGEGVPKDEREAVRYYKLAALKNFVPSLISLSFCYRLGLGVDTNAL 401
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+ + +AAE A + Y G G + A W ++A+ + AQ G
Sbjct: 402 SSFHYMKKAAELHNAYAQNCLAFFYEEGYGTKRNIEFAIMWYTKSANANNPWAQTNLGT- 460
Query: 274 LFTEG-----EMMKAVVYLELATRAGETAA 298
++ EG + K+V Y +LA G + A
Sbjct: 461 IYFEGIHVPMDREKSVYYFKLAANQGHSRA 490
>gi|261821024|ref|YP_003259130.1| Sel1 domain-containing protein repeat-containing protein
[Pectobacterium wasabiae WPP163]
gi|261605037|gb|ACX87523.1| Sel1 domain protein repeat-containing protein [Pectobacterium
wasabiae WPP163]
Length = 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + HG G+ ++ KAL+ ++K + +G A + G++Y++ + A Y +A
Sbjct: 104 GVLYSHGNGILQDHQKALEWYVKASEQGYAKAQFNLGMVYFDGLGVKQNYQKAFMWYTKA 163
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + ++A +A+ G+ +AQ+ L + G+GV
Sbjct: 164 AEQGLAIAQTNLGLMYDKGIGAKKDNQKAFDWYMKAAQQGYDKAQFNLGMMYFDGQGVKQ 223
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ QEA WY +AAE G A +N + + G+G+ ++++A +W+ +A++ G +AQ
Sbjct: 224 DYQEAFMWYKKAAEQGLAIAQFNLGVLFINGQGVQQNYQKASEWLMKASEQGDARAQFNL 283
Query: 271 GL----GLFTEGEMMKAVVYLELATRAG 294
L GL E +M KA Y + G
Sbjct: 284 ALLYSNGLGVEKDMEKAKYYFVKSCNGG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 25/196 (12%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
+C+S A + + ++ V L G + G GV+++ KA + ++K A +G+ A + G++
Sbjct: 52 LCES---AYKGIADSQVSL--GVIYSKGNGVKQDYHKAFEWYMKAAKQGNMKAQFNLGVL 106
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
Y + +L D ++A++ +AS G+ +AQ+ L + G
Sbjct: 107 YSHGN------------GILQDH-------QKALEWYVKASEQGYAKAQFNLGMVYFDGL 147
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV N Q+A WY +AAE G A N L Y G G +++A W +AA G+ KA
Sbjct: 148 GVKQNYQKAFMWYTKAAEQGLAIAQTNLGLMYDKGIGAKKDNQKAFDWYMKAAQQGYDKA 207
Query: 267 QLEHGLGLFTEGEMMK 282
Q G+ ++ +G+ +K
Sbjct: 208 QFNLGM-MYFDGQGVK 222
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
K L +++ G +Q L + +G GV + +A WY++AA+ G ++A +N + YS
Sbjct: 50 KQLCESAYKGIADSQVSLGVIYSKGNGVKQDYHKAFEWYMKAAKQGNMKAQFNLGVLYSH 109
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
G G+ H++A +W +A++ G+ KAQ G+ GL + KA ++ A G
Sbjct: 110 GNGILQDHQKALEWYVKASEQGYAKAQFNLGMVYFDGLGVKQNYQKAFMWYTKAAEQG 167
>gi|168334657|ref|ZP_02692802.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 721
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV +NL A + + K A +G A + G +Y++ M A + Y +A
Sbjct: 501 GICYEKGIGVLQNLYGAFEWYSKAAKQGYVAAQIKIGDLYFDGLGVMQNFYEAFAWYAKA 560
Query: 164 AVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD A+ AE +A +L Q + GH ++Y + G V
Sbjct: 561 AKDGDTLARHKVAECYENGTGVEIDMVKAFRLFEQLAKEGHAESRYDIGYFYGTGTVVHK 620
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A +WY AA GG+ +A Y+ +LCY G G+ + +A KW+K AAD G AQ E
Sbjct: 621 SARKAFKWYKSAAVGGFAQAQYSVALCYEVGIGVSKNKIKAFKWLKSAADGGCVDAQYEL 680
Query: 271 GLGLF 275
+ F
Sbjct: 681 AMAYF 685
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA-----------------MVDAGLMY 147
++ G + G GV +N +A + K A G TLA MV A ++
Sbjct: 534 IKIGDLYFDGLGVMQNFYEAFAWYAKAAKDGDTLARHKVAECYENGTGVEIDMVKAFRLF 593
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ K+ A S Y G +A +A K A++ G +AQY +ALC G G
Sbjct: 594 EQLAKEGHAESRYDIGYFYGTGTVVHKSARKAFKWYKSAAVGGFAQAQYSVALCYEVGIG 653
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N +A +W AA+GG V A Y ++ Y G G + + W+++AA+ GH A
Sbjct: 654 VSKNKIKAFKWLKSAADGGCVDAQYELAMAYFEGNGTSKDRPKGKWWLQKAANQGHEAAL 713
Query: 268 L 268
L
Sbjct: 714 L 714
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------------WEM 150
+ + GK + G V K+ +KA + +L+ A + + A G+ Y +E
Sbjct: 353 IYKLGKIYTDGIIVEKDYEKAFNCYLQLAQKSNKDAQYKVGIAYMYGNGVEKDSTKAFEW 412
Query: 151 DKKEAA----ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
KK A S ++ + N EEA + A+ G++ AQ + + +G
Sbjct: 413 LKKAAERKHKESQHKIGIAYAEGVGVEQNLEEAFRWSKLAADQGYLFAQNNVGVAYEKGL 472
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV + EA WY++AA V A +N +CY G G+ + A +W +AA G+ A
Sbjct: 473 GVKQDDDEAFAWYMKAALQNGVEAQFNLGICYEKGIGVLQNLYGAFEWYSKAAKQGYVAA 532
Query: 267 QLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 300
Q++ G L+ +G +A + A + G+T A H
Sbjct: 533 QIKIG-DLYFDGLGVMQNFYEAFAWYAKAAKDGDTLARH 570
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+ QY LA +G + N+ W AAE GYV A Y+ +L Y+ G+G+ +A
Sbjct: 279 KGQYDLAWKYIKGIDIKKNVSAGIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAW 338
Query: 253 KWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV-VYLELATRAGETA 297
+W ++AA GH K+ + G G+ E + KA YL+LA ++ + A
Sbjct: 339 EWFEKAAAQGHAKSIYKLGKIYTDGIIVEKDYEKAFNCYLQLAQKSNKDA 388
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 41/163 (25%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR----- 229
N + L A+ G+V AQY +AL G G++ + +A W+ +AA G+ +
Sbjct: 297 NVSAGIDWLRTAAENGYVYAQYHMALRYAAGDGIEQDEHKAWEWFEKAAAQGHAKSIYKL 356
Query: 230 -------------------------------AMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
A Y + Y +G G+ +A +W+K+A
Sbjct: 357 GKIYTDGIIVEKDYEKAFNCYLQLAQKSNKDAQYKVGIAYMYGNGVEKDSTKAFEWLKKA 416
Query: 259 ADCGHGKAQLEHGLGL-FTEGEMMKAVVYLELATRAGETAADH 300
A+ H ++Q H +G+ + EG ++ LE A R + AAD
Sbjct: 417 AERKHKESQ--HKIGIAYAEGVGVEQ--NLEEAFRWSKLAADQ 455
>gi|338708147|ref|YP_004662348.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294951|gb|AEI38058.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 611
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISLY--RQA 163
G + G G KN +KA + K A +G A + G MY+ E K +LY ++A
Sbjct: 190 GYMYNKGEGTPKNSEKAFYWYQKAADKGIPEAQSNLGNMYFIGEGTPKNPEKALYWLKKA 249
Query: 164 A---------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A +LG +N +EAV +A+ G A + LAL + GRGV N ++
Sbjct: 250 ADQGNIIATYLLGKQYMAISNEKEAVHWYQKAADKGLASAAFYLALMYNNGRGVAQNPEK 309
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEH 270
A WY +AA+ A +N L Y+ G +P ++A W ++AA+ G+ AQ L++
Sbjct: 310 AFYWYQKAADHNIPEAEFNLGLMYNLGRAVPKDLKKAYFWYQKAAEHGYVSAQVNVGLQY 369
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
LG+ T + KA + + A G A+ + Q T +D
Sbjct: 370 LLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMYQLGYGTPKD 414
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+GV KN K+ K A +G A D L+Y E E A ++A
Sbjct: 82 GLMYDRGKGVAKNEKKSFYWMQKAADQGIAAAQFDMSLIYQEGIIFPKNPEKAFEWCQKA 141
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P A+ P N+E+A +A+ + A+ L ++G G
Sbjct: 142 ADQGYPNAEAVLGDMYYDGEGTPKNSEKAFYWYQKAADQDYPDAKVSLGYMYNKGEGTPK 201
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N ++A WY +AA+ G A N Y GEG P + +A W+K+AAD G+
Sbjct: 202 NSEKAFYWYQKAADKGIPEAQSNLGNMYFIGEGTPKNPEKALYWLKKAADQGN 254
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G KN +KAL K A +G+ +A G Y + ++ A+ Y++AA G
Sbjct: 226 GNMYFIGEGTPKNPEKALYWLKKAADQGNIIATYLLGKQYMAISNEKEAVHWYQKAADKG 285
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
+A N E+A +A+ A++ L L + GR V +L++
Sbjct: 286 LASAAFYLALMYNNGRGVAQNPEKAFYWYQKAADHNIPEAEFNLGLMYNLGRAVPKDLKK 345
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG--- 271
A WY +AAE GYV A N L Y G + +A W ++AAD G+ A+ G
Sbjct: 346 AYFWYQKAAEHGYVSAQVNVGLQYLLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMY 405
Query: 272 -LGLFTEGEMMKAVVYLELA 290
LG T ++ KA + + A
Sbjct: 406 QLGYGTPKDLEKAKYWYQKA 425
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G ++ G +NL+KA + K A +G+ A G MY + K E A Y++A
Sbjct: 366 GLQYLLGIETNRNLEKAFYWYQKAADQGNEDAETRFGYMYQLGYGTPKDLEKAKYWYQKA 425
Query: 164 A--------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A + P N EA+K + QA+ G+ A+ L RG GV
Sbjct: 426 ADQDYASGKYALGQLIYDTGKTNPKNLAEAIKWIKQAAYQGNEAAECFLGALYERGEGVP 485
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
NL++A W R+A+ G A N L Y GEG+P + QA W K++A+ A
Sbjct: 486 KNLEQAIYWLQRSAQQGNALAACNLGLIYYQGEGVPKNLEQAAYWFKKSAEQNFAGADF- 544
Query: 270 HGLGLFT 276
LG+ T
Sbjct: 545 -CLGMMT 550
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+A + + +A+ GH AQ+QL L RG+GV N +++ W +AA+ G A ++ SL
Sbjct: 60 EKAFRWMEEAADQGHAEAQHQLGLMYDRGKGVAKNEKKSFYWMQKAADQGIAAAQFDMSL 119
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y G P + +A +W ++AAD G+ A+ G ++ +GE
Sbjct: 120 IYQEGIIFPKNPEKAFEWCQKAADQGYPNAEAVLG-DMYYDGE 161
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK-EAAISLYRQA 163
G + GR V K+L KA + K A G A V+ GL Y E ++ E A Y++A
Sbjct: 330 GLMYNLGRAVPKDLKKAYFWYQKAAEHGYVSAQVNVGLQYLLGIETNRNLEKAFYWYQKA 389
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVD 209
A G+ A+ P + E+A +A+ + +Y L L G+
Sbjct: 390 ADQGNEDAETRFGYMYQLGYGTPKDLEKAKYWYQKAADQDYASGKYALGQLIYDTGKTNP 449
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
NL EA +W +AA G A Y GEG+P + QA W++R+A G+ A
Sbjct: 450 KNLAEAIKWIKQAAYQGNEAAECFLGALYERGEGVPKNLEQAIYWLQRSAQQGNALAACN 509
Query: 270 HGLGLFTEGE 279
GL ++ +GE
Sbjct: 510 LGL-IYYQGE 518
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLY 160
R+G ++ G G K+L+KA + K A + G + ++ K AI
Sbjct: 400 RFGYMYQLGYGTPKDLEKAKYWYQKAADQDYASGKYALGQLIYDTGKTNPKNLAEAIKWI 459
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+QAA G+ AA+ P N E+A+ L +++ G+ A L L ++G G
Sbjct: 460 KQAAYQGNEAAECFLGALYERGEGVPKNLEQAIYWLQRSAQQGNALAACNLGLIYYQGEG 519
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE--GLPLSHRQARKWMKRA 258
V NL++AA W+ ++AE + A + + + + P + ++ +W ++A
Sbjct: 520 VPKNLEQAAYWFKKSAEQNFAGADFCLGMMTAHDDIPSYPHTMDESLRWYQKA 572
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 187 SIAGHVRAQYQLALCLHRGRGVDF--NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
I +A+ Q L +H + D +L++A RW AA+ G+ A + L Y G+G+
Sbjct: 32 EITSPTQAEDQFHLAMHYKKNDDNKQDLEKAFRWMEEAADQGHAEAQHQLGLMYDRGKGV 91
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +++ WM++AAD G AQ + L ++ EG
Sbjct: 92 AKNEKKSFYWMQKAADQGIAAAQFDMSL-IYQEG 124
>gi|407039215|gb|EKE39510.1| protein kinase, putative [Entamoeba nuttalli P19]
Length = 1038
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+K+G GV+ + + + L+ A GS++AM + G Y+ LG+
Sbjct: 726 YKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVGCWYY-----------------LGENF 768
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N +EAVK Y+++ G+ +A L C G GV+ N ++A +W+ R+A+ G V
Sbjct: 769 K--VNKKEAVKWYYKSAKEGYGKAMCNLGRCYFDGEGVECNKKKAFKWFKRSAKKGIVSG 826
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+N S CY +G+G + +A W K A+ GH +A + +G
Sbjct: 827 QFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFIIYG 867
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---------- 157
G + G G K ++KAL F ++ GS +A + G++ + ++ E I
Sbjct: 612 GVFYSLGYGTSKQINKALHLFDIASSHGSGIAENNKGVILFSGNEHENEIRDCVEALQCF 671
Query: 158 ----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ + + + +A++ L +++ G+ A+ LA C G G
Sbjct: 672 IRSSEKGCKEGMFNASVCYFNGDGVEKDDYKAIEYLKKSAELGYAEAECLLASCYKYGTG 731
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + + +W L+AA G AM+N Y GE ++ ++A KW ++A G+GKA
Sbjct: 732 VKMSNELYVQWTLQAANNGSSIAMFNVGCWYYLGENFKVNKKEAVKWYYKSAKEGYGKAM 791
Query: 268 LEHGLGLFTEGE 279
G F +GE
Sbjct: 792 CNLGRCYF-DGE 802
>gi|270156775|ref|ZP_06185432.1| TPR repeat family protein [Legionella longbeachae D-4968]
gi|289164776|ref|YP_003454914.1| Sel1 repeat protein [Legionella longbeachae NSW150]
gi|269988800|gb|EEZ95054.1| TPR repeat family protein [Legionella longbeachae D-4968]
gi|288857949|emb|CBJ11809.1| putative Sel1 repeat protein [Legionella longbeachae NSW150]
Length = 376
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EAM LL G+ F++G+GV KN ++AL + K A + LA + G MY
Sbjct: 49 EAMYLL--GRMFQYGQGVSKNHEEALKWYQKSAEKNYPLAQLSLGFMY------------ 94
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
LG+ Q N EA K +++ G+ AQ +AL G GV N + A W+
Sbjct: 95 -----DLGEGVKQ--NFPEAFKWYMKSAQQGNAIAQRNIALMYSTGDGVQANKKMAFDWF 147
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++A+ GY +A N + Y GEG +A W ++AA+ G KA E+ LGL G+
Sbjct: 148 EKSAKQGYSKAQVNLAYDYIMGEGTKKDVNKAFYWYQKAAEQGDAKA--EYSLGLLYTGQ 205
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA+K +++ + AQ L G GV N EA +WY+++A+ G A N
Sbjct: 67 NHEEALKWYQKSAEKNYPLAQLSLGFMYDLGEGVKQNFPEAFKWYMKSAQQGNAIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEGEMMKAVVYLELA 290
+L YS G+G+ + + A W +++A G+ KAQ+ ++ +G T+ ++ KA + + A
Sbjct: 127 ALMYSTGDGVQANKKMAFDWFEKSAKQGYSKAQVNLAYDYIMGEGTKKDVNKAFYWYQKA 186
Query: 291 TRAGETAADHVKNVIL--QQLSATSRDRA 317
G+ A++ ++ QQ D+A
Sbjct: 187 AEQGDAKAEYSLGLLYTGQQPGVGQDDQA 215
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEA--AISLYRQAAVL 166
+ G GV+ N A D F K A +G + A V+ Y E KK+ A Y++AA
Sbjct: 130 YSTGDGVQANKKMAFDWFEKSAKQGYSKAQVNLAYDYIMGEGTKKDVNKAFYWYQKAAEQ 189
Query: 167 GDPAA-----------QPANAEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD A QP ++ Y QA+ GH RAQ LA +G GV+ +
Sbjct: 190 GDAKAEYSLGLLYTGQQPGVGQDDQAAFYWFSQAANQGHPRAQTYLAYYYLKGYGVEADP 249
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Q+AA WY AA+ G A G G+ + Q+ W +AA G+ Q + G
Sbjct: 250 QKAAYWYQVAAQNGQSEAQVEIGQLLLTGTGVDKDYAQSFYWFTKAAAQGNTLGQAKLGY 309
Query: 273 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 311
GL + + +KA ++A + A ++ ++LSA
Sbjct: 310 MYLAGLGVDKDWIKAYALFKIAAKNKNQEAAKELKILQKKLSA 352
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+G A + + A L QA+ G++ A Y L G+GV N +EA +WY ++AE
Sbjct: 21 VVGFAAFENGDYTTAYPYLMQAARDGNIEAMYLLGRMFQYGQGVSKNHEEALKWYQKSAE 80
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
Y A + Y GEG+ + +A KW ++A G+ AQ L +++ G+ ++A
Sbjct: 81 KNYPLAQLSLGFMYDLGEGVKQNFPEAFKWYMKSAQQGNAIAQRNIAL-MYSTGDGVQA 138
>gi|294661289|ref|YP_003573165.1| hypothetical protein Aasi_1767 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336440|gb|ACP21037.1| hypothetical protein Aasi_1767 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1037
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V N AL + K A +G A MY E +K E A+ Y +A
Sbjct: 392 GDIYYFGKIVSCNYQNALKWYKKAAGKGYAKAQNALAYMYEEGLGIQNKSERAVEWYTKA 451
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ G+ AQ +A K ++A+ G+++AQ +L +G G++
Sbjct: 452 AMQGNITAQYNLGRIYYNGKGVRRAYNKAFKWYHKAANQGNIKAQTKLGYMYAKGLGIEQ 511
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
NL + +WY +AA G + A + L Y GEG+ + +A +W +AA+ G KAQ
Sbjct: 512 NLGNSVKWYNKAANKGNITAQFKLGLLYKKGEGVAQDYHKASEWFTKAANQGLVKAQYSL 571
Query: 268 --LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
L + LG E +A +L A G A
Sbjct: 572 GCLYYNLGESIEHNYQQAFKWLSKAANEGHAEA 604
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+ G +K G GV ++ KA + F K A +G A G +Y+
Sbjct: 533 FKLGLLYKKGEGVAQDYHKASEWFTKAANQGLVKAQYSLGCLYYN--------------- 577
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG+ N ++A K L +A+ GH AQ+ LA G GV+ + QEA W+ +AA
Sbjct: 578 -LGESIEH--NYQQAFKWLSKAANEGHAEAQFSLARLFEDGLGVEQDKQEAIEWFTKAAN 634
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEM 280
G V+A Y+ L Y E + + +A +W +AA+ AQ GL E +
Sbjct: 635 QGLVKAQYSLGLLYETDEDIGHDYHKAFEWYSKAANQNDAVAQSSLAFLFIDGLGVERNV 694
Query: 281 MKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+A+ + A + G A + +I ++ R+
Sbjct: 695 QQAIEWFTKAAQQGVVEAQYNLGIIYKRGEDIERN 729
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
+ F+ G GV ++ +A++ F K A +G A GL+Y E D+ A Y +
Sbjct: 609 ARLFEDGLGVEQDKQEAIEWFTKAANQGLVKAQYSLGLLY-ETDEDIGHDYHKAFEWYSK 667
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA N +AV AQ LA G GV+ N+Q+A W+ +A
Sbjct: 668 AA----------NQNDAV-------------AQSSLAFLFIDGLGVERNVQQAIEWFTKA 704
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEG 278
A+ G V A YN + Y GE + +++++ +W +AA G AQ + G GL E
Sbjct: 705 AQQGVVEAQYNLGIIYKRGEDIERNYQKSFEWFTKAASQGSVAAQNKLGSIYKKGLGREK 764
Query: 279 EMMKAVVY 286
++ +A+ +
Sbjct: 765 DLSQAIFW 772
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ A GDP AQ P +A +A++ +A+ AQ L + G+
Sbjct: 341 KEQAQAGDPLAQTNLGYMYSEGLGFPVDARKAIEWYTKAAHQEFAIAQCLLGDIYYFGKI 400
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR--KWMKRAADCGHGK 265
V N Q A +WY +AA GY +A +L Y + EGL + ++ R +W +AA G+
Sbjct: 401 VSCNYQNALKWYKKAAGKGYAKA--QNALAYMYEEGLGIQNKSERAVEWYTKAAMQGNIT 458
Query: 266 AQLEHG 271
AQ G
Sbjct: 459 AQYNLG 464
>gi|404378894|ref|ZP_10983970.1| hypothetical protein HMPREF9021_01187 [Simonsiella muelleri ATCC
29453]
gi|294483273|gb|EFG30959.1| hypothetical protein HMPREF9021_01187 [Simonsiella muelleri ATCC
29453]
Length = 889
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 109 KRFKHGRGVRKN--LDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQA 163
++F+H +N D A + F A +G A G++Y W +++ E RQA
Sbjct: 523 QQFQHALTSYQNQDFDNAFNEFKALAEQGHAEAQYYLGILYAQGWGVEQDE------RQA 576
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
AV +A+ GH AQY L + +G G+ N+ EA+ WY +AA
Sbjct: 577 AVW----------------YLKAADQGHAAAQYNLGMAYAKGLGIMQNMVEASYWYTQAA 620
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGE 279
+ GYV+A N Y+ GEG+ + QA +W +AAD G AQ GL G E
Sbjct: 621 KLGYVQAQNNLGELYTSGEGVNQDYAQAAEWFTKAADQGDAIAQYNLGLAYAYGRGVEQS 680
Query: 280 MMKAVVYLELATRAGETAADH 300
KA+ Y LA G A +
Sbjct: 681 DKKALEYTLLAAEQGNAIAQY 701
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + G GV ++ +A + F K A +G +A + GL Y Y +
Sbjct: 632 GELYTSGEGVNQDYAQAAEWFTKAADQGDAIAQYNLGLAY-----------AYGRGVEQS 680
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D ++A++ A+ G+ AQY L + G+GV N EAA+WY +AAE G
Sbjct: 681 D--------KKALEYTLLAAEQGNAIAQYNLGVRYESGQGVVQNYTEAAKWYTKAAEQGN 732
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A N L Y+ G G+ +A W ++AAD GH AQ GL
Sbjct: 733 PSAQNNLGLLYADGNGVEKDTDKAADWCEKAADQGHADAQFNLGL 777
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A+ G + +GRGV ++ KAL+ L A +G+ +A + G+ Y + + +
Sbjct: 660 DAIAQYNLGLAYAYGRGVEQSDKKALEYTLLAAEQGNAIAQYNLGVRY---ESGQGVVQN 716
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y EA K +A+ G+ AQ L L G GV+ + +AA W
Sbjct: 717 YT----------------EAAKWYTKAAEQGNPSAQNNLGLLYADGNGVEKDTDKAADWC 760
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT--- 276
+AA+ G+ A +N L Y+ RQA W +AA+ GH AQ + F
Sbjct: 761 EKAADQGHADAQFNLGLLYAQSTDTEEGQRQAAAWYAKAAEQGHSGAQNNLAIAYFNGWG 820
Query: 277 -EGEMMKAVVYLELATRAGETAADH 300
E + KA+V+ A G AA +
Sbjct: 821 VEQDHEKAIVWYRAAAEQGVVAAQY 845
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
A+ G R++ G+GV +N +A + K A +G+ A + GL+Y + + E
Sbjct: 697 AIAQYNLGVRYESGQGVVQNYTEAAKWYTKAAEQGNPSAQNNLGLLYADGNGVEKDTD-- 754
Query: 161 RQAAVLGDPAAQP--ANAEEAVKLLYQASI------------------AGHVRAQYQLAL 200
+AA + AA A+A+ + LLY S GH AQ LA+
Sbjct: 755 -KAADWCEKAADQGHADAQFNLGLLYAQSTDTEEGQRQAAAWYAKAAEQGHSGAQNNLAI 813
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G GV+ + ++A WY AAE G V A Y L + + P ++ A +W + A
Sbjct: 814 AYFNGWGVEQDHEKAIVWYRAAAEQGVVAAQY--GLGWLYFHSSPPNYELAEQWWQEAVK 871
Query: 261 CGHGKAQ 267
G AQ
Sbjct: 872 QGDQNAQ 878
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
GK ++ G GV ++ +A + F + A RG A G Y MD ++AA + +
Sbjct: 45 GKMYEQGLGVNQDYVQAANYFRQAAERGYPPAQAKLGEFYANGLGLPMDYRQAA-EWFSK 103
Query: 163 AAVLGD-----------PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
AA D A + + + A+ + + AQ+ L G+GV +
Sbjct: 104 AADQQDKTPEHRLHEACSAYEVEDFDTALSTFQELAQENDAVAQFHLGEMYSAGKGVPTD 163
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
Q+AA WY AA+ +V A ++ GEG+ +R A +W+ +AA+
Sbjct: 164 FQQAADWYELAAKQDFVPAQVRLGRMFANGEGVQKDYRAAAEWLMKAAE 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
+ QA+ AQ+ L +G GV+ + +AA ++ +AAE GY A Y+ G
Sbjct: 28 IFLQAAQQKSTIAQFHLGKMYEQGLGVNQDYVQAANYFRQAAERGYPPAQAKLGEFYANG 87
Query: 242 EGLPLSHRQARKWMKRAAD 260
GLP+ +RQA +W +AAD
Sbjct: 88 LGLPMDYRQAAEWFSKAAD 106
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R G+ F +G GV+K+ A + +K A R E D E +L+ QA
Sbjct: 184 VRLGRMFANGEGVQKDYRAAAEWLMKAAER--------------EDDDNE---NLFEQA- 225
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
A + + A +L + + H AQY L G V + ++A WY+++A+
Sbjct: 226 ---QNAYRQNDYANAFNMLEKLANRNHDAAQYYLGSMYKYGYSVRQDNEQAIEWYMKSAK 282
Query: 225 GGY------VR----------AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
GY VR AM+ Y G+ QA W RAA G+ AQ+
Sbjct: 283 QGYPDAVAMVRELASKHSMPLAMFGLGELYGSALGVEQDDVQAADWFLRAAQRGYVPAQI 342
>gi|254454439|ref|ZP_05067876.1| Sel1 repeat family [Octadecabacter arcticus 238]
gi|198268845|gb|EDY93115.1| Sel1 repeat family [Octadecabacter arcticus 238]
Length = 327
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+G + G+GV ++ +A+ + + A G + A+ + GLMY D EA Y +A
Sbjct: 115 NFGLMYHKGKGVLQDFSEAMKWYRRAAEHGGSKALYNLGLMY---DNGEAVSQDYVKA-- 169
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
VK A+ GH AQY L G GV + E +W+ AAE
Sbjct: 170 --------------VKWYRLAAEKGHALAQYNLGYMYKNGEGVPQDYAETVKWFRLAAEQ 215
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMM 281
G A N Y GEG+P + +A KW + AA+ G AQL G LG +
Sbjct: 216 GDSDAQNNLGAMYDTGEGVPQDYAEAAKWYQLAAEQGDADAQLNLGTIYALGHGIPQNFI 275
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM--PSL 330
+A ++ +A GE ++ +Q+++ +A W + PSL
Sbjct: 276 RAHMWFNVAAIKGEPDGVKGRDAAAKQMTSVDISKAQTKAREWTLLHGPSL 326
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEE 178
KN AL + A +G+ A + GLMY D E P + E
Sbjct: 56 KNYANALTEWKTIAEQGNASAQYNLGLMY---DTGEVV----------------PLDYAE 96
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+ A+ GH +AQ L H+G+GV + EA +WY RAAE G +A+YN L Y
Sbjct: 97 AMNWYRLAAQQGHAKAQSNFGLMYHKGKGVLQDFSEAMKWYRRAAEHGGSKALYNLGLMY 156
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRA 293
GE + + +A KW + AA+ GH AQ G ++ GE + + V + LA
Sbjct: 157 DNGEAVSQDYVKAVKWYRLAAEKGHALAQYNLGY-MYKNGEGVPQDYAETVKWFRLAAEQ 215
Query: 294 GETAADHVKNVILQQLSATSRDRA 317
G++ A + + +D A
Sbjct: 216 GDSDAQNNLGAMYDTGEGVPQDYA 239
>gi|258545692|ref|ZP_05705926.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519062|gb|EEV87921.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 499
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKE 154
+A R G +GRG +N +A++ + K A +G A + G MY E+D ++
Sbjct: 37 DAAAQFRLGWMHANGRGTAQNDRRAVEWYSKAAEQGHAAAQCNLGWMYGQGRGVEIDDEQ 96
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
AA R AA GD AQ P + A QA+ G V AQ+ L
Sbjct: 97 AAYWFER-AATQGDKQAQFNLGNLYIAGQGVPQDERRAAFWFVQAAQQGDVEAQFNLGNL 155
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV + + A RW+ +AA+ GY +A N ++ Y G G+ QA +W AA+
Sbjct: 156 YFHGNGVTQDDRRAVRWFEKAAQQGYAKAQCNLAMMYERGRGVAQDAEQAAEWYGCAAEQ 215
Query: 262 GHGKAQLEHGLGLFTEG 278
G KAQ GL L+ +G
Sbjct: 216 GDSKAQYRLGL-LYDKG 231
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA L Q + G AQ++L GRG N + A WY +AAE G+ A N
Sbjct: 24 EAYTLAQQEAQQGDAAAQFRLGWMHANGRGTAQNDRRAVEWYSKAAEQGHAAAQCNLGWM 83
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 292
Y G G+ + QA W +RAA G +AQ G L+ G+ + +A + A +
Sbjct: 84 YGQGRGVEIDDEQAAYWFERAATQGDKQAQFNLG-NLYIAGQGVPQDERRAAFWFVQAAQ 142
Query: 293 AGETAAD-HVKNVILQQLSATSRDR 316
G+ A ++ N+ T DR
Sbjct: 143 QGDVEAQFNLGNLYFHGNGVTQDDR 167
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
A++A QA+ G+ AQYQL G+GV+ + + AA+WY +AA G+ +A Y
Sbjct: 390 AQQAAASFEQAAKQGNADAQYQLGFMYETGQGVEQDYRRAAQWYEKAAAQGHAQAQYQLG 449
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QLE 269
Y G G+ + +A KW +RAA G +A QLE
Sbjct: 450 SLYREGLGVEENDEEAEKWWQRAAAQGVAQAHRQLE 485
>gi|152997375|ref|YP_001342210.1| Sel1 domain-containing protein [Marinomonas sp. MWYL1]
gi|150838299|gb|ABR72275.1| Sel1 domain protein repeat-containing protein [Marinomonas sp.
MWYL1]
Length = 685
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 116/238 (48%), Gaps = 26/238 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G+G+ K+ ++++ +L+ A G+ A + G Y E + EAA + YR+AA
Sbjct: 276 YYSGQGIEKSYQESVNWYLRSAELGNNSAQYNLGYFYEEGIGIPQNFPEAA-NWYRKAAD 334
Query: 166 LGDPAAQPA-----NAEEAVKLLY--------QASIAGHVRAQYQLALCLHRGRGVDFNL 212
G AQ +A VK Y +A+ G+ RAQ L G GV+ N
Sbjct: 335 QGHIKAQTNLGYFFDAGLGVKQSYLEAANWYRKAADQGYPRAQTNLGYLFDEGLGVEQNY 394
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL--SHRQARKWMKRAADCGHGKAQLEH 270
EAA WY +AA+ GY RA T+L Y F EGL + S+ +A W ++A+D G+ +AQ
Sbjct: 395 LEAANWYRKAADQGYPRAQ--TNLGYLFDEGLGVEQSYLEAANWYRKASDQGYSRAQTNL 452
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
G LF EG ++ YLE A AAD ++ L A + + DS RA+
Sbjct: 453 GY-LFDEGLGVEQ-NYLEAANWY-RKAADQGYSIAQNNLGALYQAGYGVKQDSQRAIE 507
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV ++ +A +LK A + A + G MY EM + E A + YR+
Sbjct: 201 GDLYYSGLGVAQDFTEAEKWYLKAAEDDNGEAEYNLGYMY-EMGEGVAQDYEVAANWYRK 259
Query: 163 AAVLGDPAAQPANAE-----EAVKLLYQASIAGHVR--------AQYQLALCLHRGRGVD 209
AA AQ A A + ++ YQ S+ ++R AQY L G G+
Sbjct: 260 AAEQDYTNAQNALAYLYYSGQGIEKSYQESVNWYLRSAELGNNSAQYNLGYFYEEGIGIP 319
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N EAA WY +AA+ G+++A N + G G+ S+ +A W ++AAD G+ +AQ
Sbjct: 320 QNFPEAANWYRKAADQGHIKAQTNLGYFFDAGLGVKQSYLEAANWYRKAADQGYPRAQTN 379
Query: 270 HGLGLFTEG 278
G LF EG
Sbjct: 380 LGY-LFDEG 387
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G F G GV +N +A + + K A +G ++A + G +Y + AI LY+ A
Sbjct: 453 GYLFDEGLGVEQNYLEAANWYRKAADQGYSIAQNNLGALYQAGYGVKQDSQRAIELYKMA 512
Query: 164 A-------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A +L + N EA K +++ G + AQ +L L +RG GVD
Sbjct: 513 AEQGLSDGQYNLAYLLNEGIGVDKNPVEAEKWFRKSAEQGDIDAQVELGLLFYRGSGVDK 572
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N QEA +W+ +AA+ G A N Y G G+ + A +W ++A + AQ
Sbjct: 573 NYQEAWKWFHQAAKQGSAAAQNNIGAMYQNGYGVTQDYSLAAEWYQKAVNQDFAGAQ 629
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F+ G GV+++ +KA +LK A G++ A V+ G +Y+ G
Sbjct: 168 FEEGLGVQQDYEKAAYWYLKAALNGNSYAQVNLGDLYYS-----------------GLGV 210
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
AQ + EA K +A+ + A+Y L G GV + + AA WY +AAE Y A
Sbjct: 211 AQ--DFTEAEKWYLKAAEDDNGEAEYNLGYMYEMGEGVAQDYEVAANWYRKAAEQDYTNA 268
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+ Y G+G+ S++++ W R+A+ G+ AQ + LG F E
Sbjct: 269 QNALAYLYYSGQGIEKSYQESVNWYLRSAELGNNSAQ--YNLGYFYE 313
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL------YRQAA 164
F +G KN+DKA ++ AA+ S LA L +W D E A + Y +AA
Sbjct: 96 FYQAKGGDKNVDKAF-HYMTLAAK-SGLAKAQNYLGWWYEDGTEVAQNYATASVWYLKAA 153
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
AQ + E+A +A++ G+ AQ L + G GV +
Sbjct: 154 NQDYDYAQNNLAYLFEEGLGVQQDYEKAAYWYLKAALNGNSYAQVNLGDLYYSGLGVAQD 213
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
EA +WYL+AAE A YN Y GEG+ + A W ++AA+ + AQ
Sbjct: 214 FTEAEKWYLKAAEDDNGEAEYNLGYMYEMGEGVAQDYEVAANWYRKAAEQDYTNAQ 269
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G F G GV+++ +A + + K A +G A + G ++ E + EAA + YR+
Sbjct: 345 GYFFDAGLGVKQSYLEAANWYRKAADQGYPRAQTNLGYLFDEGLGVEQNYLEAA-NWYRK 403
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G P AQ + EA +AS G+ RAQ L G GV+
Sbjct: 404 AADQGYPRAQTNLGYLFDEGLGVEQSYLEAANWYRKASDQGYSRAQTNLGYLFDEGLGVE 463
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
N EAA WY +AA+ GY A N Y G G+ ++A + K AA+ G Q
Sbjct: 464 QNYLEAANWYRKAADQGYSIAQNNLGALYQAGYGVKQDSQRAIELYKMAAEQGLSDGQYN 523
Query: 268 ----LEHGLGL 274
L G+G+
Sbjct: 524 LAYLLNEGIGV 534
>gi|445499600|ref|ZP_21466455.1| Sel-1-like protein [Janthinobacterium sp. HH01]
gi|444789595|gb|ELX11143.1| Sel-1-like protein [Janthinobacterium sp. HH01]
Length = 531
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 118/272 (43%), Gaps = 63/272 (23%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ +G+GV ++ KALD + K A +G A + GL Y E A YR+AA
Sbjct: 259 YDNGQGVPRDEQKALDWYRKAAEQGHAAAQNNLGLRYDHGQGVAQDYEQAQFWYRKAAEQ 318
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G P AQ + +EA+ +A+ GH+RAQ+ L L GRGV + +
Sbjct: 319 GFPGAQYHLGMLYDAGHGVVQDHQEAIFWYRKAADQGHLRAQFDLGLRYETGRGVPRDDR 378
Query: 214 EAARWYLRAAEGGYVRAMYNTSLC------------------------------------ 237
+A WY RAAE Y A YN L
Sbjct: 379 KAMAWYRRAAEQDYAAAQYNLGLLFDKDDGPQPDCAQANGWYAKAAEQGHALAQFTLGLR 438
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV-----YLELATR 292
Y G+GL + QA W +AA GH +AQ GL +F G+ ++A + +L +A R
Sbjct: 439 YDNGQGLAQDYAQAHHWYLKAAGQGHARAQFNLGL-MFMVGQGVRADIAQAWMWLAMAER 497
Query: 293 AGETAAD-HVKNVILQQLS---ATSRDRAMLV 320
+G AA ++KN + S A +R+R L+
Sbjct: 498 SGYAAAGRYLKNAAARMDSGQLAQARERLELL 529
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G R+ +G+GV +++ +A+ + K A +G A + L + + D + AI YR+A
Sbjct: 184 GLRYDNGQGVPQDVGQAMSWYRKAADQGYAPAQFNLALRFDKGDGIAQDSQKAILWYRRA 243
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A ++Q P + ++A+ +A+ GH AQ L L G+GV
Sbjct: 244 AEQDHASSQFNLGLIYDNGQGVPRDEQKALDWYRKAAEQGHAAAQNNLGLRYDHGQGVAQ 303
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AAE G+ A Y+ + Y G G+ H++A W ++AAD GH +AQ +
Sbjct: 304 DYEQAQFWYRKAAEQGFPGAQYHLGMLYDAGHGVVQDHQEAIFWYRKAADQGHLRAQFDL 363
Query: 271 GL 272
GL
Sbjct: 364 GL 365
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 25/231 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G+GV ++ + A+ + + A G A + G+MY E + +EAA + Y+
Sbjct: 40 GFMYFNGQGVAQSYELAVVWYRQAAQSGLEHAQYNLGVMYQKGQGVEQNYQEAA-AWYQL 98
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AAQ A+ ++A+ +A+ G AQ L + G+GV
Sbjct: 99 AAEQGYAAAQYNLGWLYAKGQGLDADTQKAMYWFSKAADQGDAGAQNNLGMMYDTGKGVP 158
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AAE GY RA +N L Y G+G+P QA W ++AAD G+ AQ
Sbjct: 159 QDFKQAIAWYRKAAEQGYPRAQFNLGLRYDNGQGVPQDVGQAMSWYRKAADQGYAPAQFN 218
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
L F +G+ + KA+++ A ++ +I RD
Sbjct: 219 LAL-RFDKGDGIAQDSQKAILWYRRAAEQDHASSQFNLGLIYDNGQGVPRD 268
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ L G+GV + + A WY +AA+ G A YN + Y G+G+ +++
Sbjct: 31 GVANAQHSLGFMYFNGQGVAQSYELAVVWYRQAAQSGLEHAQYNLGVMYQKGQGVEQNYQ 90
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
+A W + AA+ G+ AQ G L+ +G+ + KA+ + A G+ A
Sbjct: 91 EAAAWYQLAAEQGYAAAQYNLGW-LYAKGQGLDADTQKAMYWFSKAADQGDAGA 143
>gi|212704272|ref|ZP_03312400.1| hypothetical protein DESPIG_02327 [Desulfovibrio piger ATCC 29098]
gi|212672234|gb|EEB32717.1| Sel1 repeat protein [Desulfovibrio piger ATCC 29098]
Length = 352
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
AM G + HGRGVRK+ ++A+D + + A +G A G MY L
Sbjct: 160 AMAQYNLGYLYAHGRGVRKSENEAIDWYGRAANQGLADAQYSLGWMY-----------LN 208
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+A+ D +A +A+ H++AQ LA GRG + +A WY
Sbjct: 209 AKASNQDDT--------KAAHWFQRAAEQDHLKAQNNLAYMYAEGRGFAQDNLKAVEWYT 260
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT 276
RAAE GY A YN Y G G+P + +A +W ++AA+ AQ GL G
Sbjct: 261 RAAERGYAEAQYNLGFMYEQGRGVPQDYAKAVEWYRKAAEQNEPAAQYSLGLMYDQGTGV 320
Query: 277 EGEMMKAVVYLELATRAGETAA 298
+ + +A + LA + G+ A
Sbjct: 321 QRNLSEATRWYRLAAKNGDPDA 342
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 47/95 (49%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ AV L QA+ G AQ LA L G GV N EA RW+ +AAE G A YN
Sbjct: 109 QRAVTLFRQAADKGLANAQNALATALATGDGVRRNYGEAGRWFRKAAEQGLAMAQYNLGY 168
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
Y+ G G+ S +A W RAA+ G AQ G
Sbjct: 169 LYAHGRGVRKSENEAIDWYGRAANQGLADAQYSLG 203
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G GVR+N +A F K A +G +A + G +Y G +
Sbjct: 137 GDGVRRNYGEAGRWFRKAAEQGLAMAQYNLGYLY-----------------AHGRGVRKS 179
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N EA+ +A+ G AQY L + + + +AA W+ RAAE +++A N
Sbjct: 180 EN--EAIDWYGRAANQGLADAQYSLGWMYLNAKASNQDDTKAAHWFQRAAEQDHLKAQNN 237
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLE 288
+ Y+ G G + +A +W RAA+ G+ +AQ G ++ +G + KAV +
Sbjct: 238 LAYMYAEGRGFAQDNLKAVEWYTRAAERGYAEAQYNLGF-MYEQGRGVPQDYAKAVEWYR 296
Query: 289 LATRAGETAADHVKNVILQQLSATSRD 315
A E AA + ++ Q + R+
Sbjct: 297 KAAEQNEPAAQYSLGLMYDQGTGVQRN 323
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 164 AVLGD--PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
AVLG+ A + ++AV LL + +G+ A Y L GRGV + Q A + +
Sbjct: 58 AVLGEVQSALDSKDYKKAVTLLTPLTKSGNAEALYILGRLTQDGRGVKKSPQRAVTLFRQ 117
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
AA+ G A + + G+G+ ++ +A +W ++AA+ G AQ G L+ G
Sbjct: 118 AADKGLANAQNALATALATGDGVRRNYGEAGRWFRKAAEQGLAMAQYNLGY-LYAHG 173
>gi|405952396|gb|EKC20213.1| sel-1-like protein 1 [Crassostrea gigas]
Length = 1087
Score = 78.6 bits (192), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
F+ GRGV N ++AL FL A G+ A G MY E E A S +++AA
Sbjct: 704 FQGGRGVGINHERALHYFLMAAESGNANAFAFLGKMYSEGSPAVKQSNETAFSYFKKAAD 763
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+P Q + +A+K A+ G V Q QLAL + GRG +
Sbjct: 764 KGNPVGQTGLGMLYMYGKGVDKDYTKAIKYFSLAADQGWVDGQLQLALMYYGGRGTRRDY 823
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A++GG+V A YN + ++ G G+ + A + K A+ G +
Sbjct: 824 KLAVKYFNLASQGGHVLAFYNLAQMHATGTGVLRNCHTAVELFKNVAERGRWAEMMPEAY 883
Query: 273 GLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQ 307
++ EG + +A++ Y+ LA E A +V ++ Q
Sbjct: 884 NMYKEGHLDQALMKYVFLAELGYEVAQSNVAYMLDQ 919
>gi|168334658|ref|ZP_02692803.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 648
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAIS 158
+ G ++ G GV +L+ A + K A GS A + L Y ++DK A
Sbjct: 452 KLGYCYEKGTGVDSDLEMAFKFYQKAATLGSVKAQTNLALCYEKGIGTTLDLDK---AFE 508
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y +AAV G AQ N +A + +A+I GH +AQY LALC G
Sbjct: 509 WYVRAAVSGFAKAQNNLGYLYEXGKGATKNYSKAFEWYQKAAIQGHAKAQYNLALCYEYG 568
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+GV NL E +W+ +AE G + A Y Y G G Q W ++AA+ GH +
Sbjct: 569 KGVIKNLDETFKWFKESAEQGNMYAQYALGAAYIKGLGTKKDKEQGYFWYQKAAEQGHLE 628
Query: 266 A 266
A
Sbjct: 629 A 629
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYR 161
R + +G G KNL + + K A + A G Y + +D E A Y+
Sbjct: 416 RIASAYIYGNGTEKNLIQGFRWYQKAAEQEHVEAQYKLGYCYEKGTGVDSDLEMAFKFYQ 475
Query: 162 QAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA LG AQ + ++A + +A+++G +AQ L G+G
Sbjct: 476 KAATLGSVKAQTNLALCYEKGIGTTLDLDKAFEWYVRAAVSGFAKAQNNLGYLYEXGKGA 535
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +A WY +AA G+ +A YN +LCY +G+G+ + + KW K +A+ G+ AQ
Sbjct: 536 TKNYSKAFEWYQKAAIQGHAKAQYNLALCYEYGKGVIKNLDETFKWFKESAEQGNMYAQY 595
Query: 269 EHG 271
G
Sbjct: 596 ALG 598
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
HV AQY+L C +G GVD +L+ A ++Y +AA G V+A N +LCY G G L +
Sbjct: 446 HVEAQYKLGYCYEKGTGVDSDLEMAFKFYQKAATLGSVKAQTNLALCYEKGIGTTLDLDK 505
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTE 277
A +W RAA G KAQ + LG E
Sbjct: 506 AFEWYVRAAVSGFAKAQ--NNLGYLYE 530
>gi|168334224|ref|ZP_02692425.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 648
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAIS 158
+ G ++ G GV +L+ A + K A GS A + L Y ++DK A
Sbjct: 452 KLGYCYEKGTGVDSDLEMAFKFYQKAATLGSVKAQTNLALCYEKGIGTTLDLDK---AFE 508
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y +AAV G AQ N +A + +A+I GH +AQY LALC G
Sbjct: 509 WYVRAAVSGFAKAQNNLGYLYENGKGATKNYSKAFEWYQKAAIQGHAKAQYNLALCYEYG 568
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+GV NL E +W+ +AE G + A Y Y G G Q W ++AA+ GH +
Sbjct: 569 KGVIKNLDETFKWFKESAEQGNMYAQYALGAAYIKGLGTKKDKEQGYFWYQKAAEQGHLE 628
Query: 266 A 266
A
Sbjct: 629 A 629
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYR 161
R + +G G KNL + + K A + A G Y + +D E A Y+
Sbjct: 416 RIASAYIYGNGTEKNLIQGFRWYQKAAEQEHVEAQYKLGYCYEKGTGVDSDLEMAFKFYQ 475
Query: 162 QAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA LG AQ + ++A + +A+++G +AQ L G+G
Sbjct: 476 KAATLGSVKAQTNLALCYEKGIGTTLDLDKAFEWYVRAAVSGFAKAQNNLGYLYENGKGA 535
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +A WY +AA G+ +A YN +LCY +G+G+ + + KW K +A+ G+ AQ
Sbjct: 536 TKNYSKAFEWYQKAAIQGHAKAQYNLALCYEYGKGVIKNLDETFKWFKESAEQGNMYAQY 595
Query: 269 EHG 271
G
Sbjct: 596 ALG 598
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
HV AQY+L C +G GVD +L+ A ++Y +AA G V+A N +LCY G G L +
Sbjct: 446 HVEAQYKLGYCYEKGTGVDSDLEMAFKFYQKAATLGSVKAQTNLALCYEKGIGTTLDLDK 505
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A +W RAA G KAQ + LG E
Sbjct: 506 AFEWYVRAAVSGFAKAQ--NNLGYLYEN 531
>gi|423113617|ref|ZP_17101308.1| hypothetical protein HMPREF9689_01365 [Klebsiella oxytoca 10-5245]
gi|376387888|gb|EHT00590.1| hypothetical protein HMPREF9689_01365 [Klebsiella oxytoca 10-5245]
Length = 375
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 88 CKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
KSW + +++ +A LL G+ + G GV ++ +A + K AA+ A V+ +
Sbjct: 101 AKSWYEKASVQNDVDAQFLL--GEMYNDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAV 158
Query: 146 MY-----WEMDKKEAAISLYRQAAVLGDPAAQ------PANA-------EEAVKLLYQAS 187
+Y E D ++A S Y +AA P AQ ANA ++A +A+
Sbjct: 159 LYAKGNGVEQDYRQAK-SWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAA 217
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
AQ+ L + ++G GV+ N Q+ W+ +AA + A YN Y +G+G+ S
Sbjct: 218 EQNFANAQFNLGMLYYKGEGVNQNFQQTREWFEKAASQNQLNAQYNLGQIYYYGQGVTQS 277
Query: 248 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+R+A++W ++AA GH AQ G+ ++ GE
Sbjct: 278 YRKAKEWFEKAAGEGHVDAQYNLGV-IYENGE 308
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 68 VLNKIAASFTLPQLRAASL-------VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN 120
V N + A F L ++ L K W + + + + G GV ++
Sbjct: 110 VQNDVDAQFLLGEMYNDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQD 169
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP--ANAEE 178
+A + K AA+ S A G++Y + E Y+QA + AA+ ANA+
Sbjct: 170 YRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQD---YQQAKDWYEKAAEQNFANAQF 226
Query: 179 AVKLLY------------------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+ +LY +A+ + AQY L + G+GV + ++A W+
Sbjct: 227 NLGMLYYKGEGVNQNFQQTREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFE 286
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+AA G+V A YN + Y GEG+ QAR W K+
Sbjct: 287 KAAGEGHVDAQYNLGVIYENGEGVRQDFHQARAWYKK 323
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQP--- 173
D L G A GLMY ++D ++A I Y +AA DP AQ
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAAAQNDPRAQVKLG 85
Query: 174 ---ANA-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
AN ++A +AS+ V AQ+ L + G GV + Q+A WY +AA
Sbjct: 86 LMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYNDGLGVGQDYQQAKMWYEKAA 145
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGI 194
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 19/176 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV +N + + F K A++ A + G +Y
Sbjct: 209 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVNQNFQQTREWFEKAASQNQLNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YR+A + AA GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRKAKEWFEKAAGE----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
V + +A WY +AA +A ++ + G+G ++ +QAR W A GH
Sbjct: 310 VRQDFHQARAWYKKAAAQNDAQAQFDLGVMNELGQGGSINLKQARTWFGLACKNGH 365
>gi|163795919|ref|ZP_02189883.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159178952|gb|EDP63488.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 481
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +K G GV ++ +AL F K A +G A + G MY+ D EA + +R+
Sbjct: 62 GAAYKLGLGVTQDNAEALKWFRKSAEQGFAKAQNNLGWMYYNGEGVTQDYAEA-LKWHRK 120
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EAVK +A+ G+ AQY+L RG GV
Sbjct: 121 AAEQGRADAQFIIGLMYNIGKGVTQDYAEAVKWYRKAAEQGYADAQYKLGWMYARGDGVT 180
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +AAE G A +N + Y G G+ + +A KW ++AA+ G+ AQ
Sbjct: 181 QDYAEAVKWYRKAAEQGDAVAQHNLGVSYDNGNGVTQDNAEAVKWYRKAAEQGYAAAQYN 240
Query: 270 HGLGLFTEGEMMKAVV 285
G+ + +++ +
Sbjct: 241 LGVSYYNGDGVLQDTI 256
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ L G GV + EA +W+ ++AE G+ +A N Y GEG+ +
Sbjct: 53 GVAWAQNILGAAYKLGLGVTQDNAEALKWFRKSAEQGFAKAQNNLGWMYYNGEGVTQDYA 112
Query: 250 QARKWMKRAADCGHGKAQLEHGL 272
+A KW ++AA+ G AQ GL
Sbjct: 113 EALKWHRKAAEQGRADAQFIIGL 135
>gi|188025664|ref|ZP_02959400.2| hypothetical protein PROSTU_01244 [Providencia stuartii ATCC 25827]
gi|188022670|gb|EDU60710.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 327
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +SW +A+ +EA + + G ++ G GV K+ +AL A +G A
Sbjct: 76 VKQSWQEAIHWFKEAAMQGSLPAQYQLGLIYEKGEGVEKSRSQALHWLTLAAEQGEADAQ 135
Query: 141 VDAGLMYWEMDK-----KEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKL 182
G +Y E + +++A+ ++ AA G P+AQ EEA+K
Sbjct: 136 HQLGWLYMEESESNHASQQSALKWFKAAAEQGHPSAQNMLGWLYENGATGKPEIEEALKW 195
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A+ G+ A L +G+ + + ++A ++++AAE G A N L Y G+
Sbjct: 196 YQEAAKQGNAFALNNLGWFYWQGKSGEVDKEKALNYFIQAAELGDKDAQLNLGLMYYQGD 255
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV-----VYLELATRAG 294
G+PLS QA+KW RAA+ G+ AQ G L +GE+ A Y ELA + G
Sbjct: 256 GVPLSIEQAQKWFMRAAEQGNAYAQYNLGW-LMQKGEVENASPYAARYYFELACKGG 311
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA 155
A +L W +++G + +++AL + + A +G+ A+ + G YW E+DK E
Sbjct: 171 AQNMLGW--LYENGATGKPEIEEALKWYQEAAKQGNAFALNNLGWFYWQGKSGEVDK-EK 227
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A++ + QAA LGD AQ L L ++G GV ++++A
Sbjct: 228 ALNYFIQAAELGDK-----------------------DAQLNLGLMYYQGDGVPLSIEQA 264
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+W++RAAE G A YN GE S AR + + A G KA
Sbjct: 265 QKWFMRAAEQGNAYAQYNLGWLMQKGEVENASPYAARYYFELACKGGLEKA 315
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A P N +A K QA+ G AQ LA G GV + QEA W+ AA G + A
Sbjct: 39 ADPPNYIQAAKYFQQAAEYGDPEAQLYLAALYESGLGVKQSWQEAIHWFKEAAMQGSLPA 98
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTE 277
Y L Y GEG+ S QA W+ AA+ G AQ H LG L+ E
Sbjct: 99 QYQLGLIYEKGEGVEKSRSQALHWLTLAAEQGEADAQ--HQLGWLYME 144
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 136 STLAMVDA------GLMYWEMDKKE--AAISLYRQAAVLGDPAAQ-------------PA 174
+T ++++A GL Y+ D A ++QAA GDP AQ
Sbjct: 19 TTTSVINAKKSFTEGLTYYNADPPNYIQAAKYFQQAAEYGDPEAQLYLAALYESGLGVKQ 78
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ +EA+ +A++ G + AQYQL L +G GV+ + +A W AAE G A +
Sbjct: 79 SWQEAIHWFKEAAMQGSLPAQYQLGLIYEKGEGVEKSRSQALHWLTLAAEQGEADAQHQL 138
Query: 235 SLCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y E S + A KW K AA+ GH AQ
Sbjct: 139 GWLYMEESESNHASQQSALKWFKAAAEQGHPSAQ 172
>gi|118091892|ref|XP_421303.2| PREDICTED: protein sel-1 homolog 1 [Gallus gallus]
Length = 791
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 385 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKAADMGN 444
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 445 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 504
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 505 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 564
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 565 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 598
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 260 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 319
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 320 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFVAEKGDVQAQVGLGQ 379
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + +P ++ A ++ K+A
Sbjct: 380 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKA 439
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 440 ADMGNPVGQ--SGLGM 453
>gi|345892243|ref|ZP_08843066.1| hypothetical protein HMPREF1022_01726 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047382|gb|EGW51247.1| hypothetical protein HMPREF1022_01726 [Desulfovibrio sp.
6_1_46AFAA]
Length = 353
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKE-AAISLYRQ 162
WG G+GVR+N +A F K A +G +A + G +Y + K E AAI Y +
Sbjct: 111 WGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGYLYAYGRGVPKDENAAIDWYSR 170
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + + +AV +A+ +++AQ LA GRG
Sbjct: 171 AANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAAEQDNLKAQNNLAYMYAEGRGYA 230
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A +WY RAAE GY A YN Y G G+P + +A +W ++AA+ AQ
Sbjct: 231 QDPVKAVQWYNRAAERGYAEAQYNLGFMYEQGRGVPQDYNKAVEWYRKAAEQNEPAAQYS 290
Query: 270 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 301
GL ++ +G + +A + LA + G+ A V
Sbjct: 291 LGL-MYDQGTGVPRNLSEATRWYRLAAKNGDPDAKAV 326
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ A +L QA+ G + AQ G+GV N +EAARW+ +AAE G A YN
Sbjct: 90 QRAAQLFRQAAEKGDISAQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGY 149
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM---KAVVYLELAT 291
Y++G G+P A W RAA+ G AQ G L ++GE KAV + E A
Sbjct: 150 LYAYGRGVPKDENAAIDWYSRAANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAA 208
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A + A+ +AV LL + G+ A Y L G+GV + Q AA+ + +AAE G +
Sbjct: 47 AIEKADYGKAVALLKPLADKGNAEALYVLGRLTLDGKGVKKSEQRAAQLFRQAAEKGDIS 106
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A + G+G+ ++R+A +W ++AA+ G AQ G L+ G
Sbjct: 107 AQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGY-LYAYG 154
>gi|338740756|ref|YP_004677718.1| hypothetical protein HYPMC_3943 [Hyphomicrobium sp. MC1]
gi|337761319|emb|CCB67152.1| conserved protein of unknown function, Sel1-like protein
[Hyphomicrobium sp. MC1]
Length = 232
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AV+ +++ AG+V AQ L L G+G + RW +AAE G + A YN + Y
Sbjct: 65 AVEYYRESAEAGNVLAQTNLGAMLAMGQGTARDEAAGVRWLTKAAEKGDIFAQYNLATLY 124
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
S G+G+P H A KW + AA+ GH +Q G G+ + ++A V+L LA + G
Sbjct: 125 SKGDGIPADHALAAKWYRAAAEAGHYPSQARLGFFYANGVGVTKDRVEAYVWLSLAAQHG 184
Query: 295 ETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
A + ++ Q+S + + + +V++WR+ S
Sbjct: 185 VGTALNSLEALVGQMSTEEKRQGLALVEAWRSRTS 219
>gi|290992989|ref|XP_002679116.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
gi|284092731|gb|EFC46372.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
Length = 376
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK-EAAISLYRQ 162
G +++G+G+ K+L +AL + K A + + + GL+Y+ +D + E + ++ +
Sbjct: 153 GLLYENGQGIEKSLTEALKWYEKAAEQNHVDSQYNMGLIYFSGGEGVDPQLEKSFKIFEK 212
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A +G AQ N + AV+ Q++ H +QY LAL G G++
Sbjct: 213 LANIGLTDAQHILGFLYVNGHGVEQNYQTAVEWFTQSANQNHADSQYNLALLYENGLGIE 272
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WYL+AA +V + ++ Y G G+ S+ A +W +AAD G ++Q
Sbjct: 273 QSDAKAYEWYLKAANQDHVLSQFSVGNMYYDGIGVEQSYESAFQWYLKAADLGDARSQFN 332
Query: 270 HGLGLF----TEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
G+ F E + K++ YL A G T A +VI Q
Sbjct: 333 VGISYFKGQGCEKNVEKSLDYLHQALSNGLTQAQQAIDVIKTQ 375
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG-DPAAQ---------PAN 175
+ +K A G+ A GL +++M + E I +AA L PA+ +
Sbjct: 70 EELVKAADEGNVSAQYHLGLYHFDMREYEKCIEYCLKAAELDFVPASTFLGYCYSTLKQD 129
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
E++ + +A++ G AQ+ + L G+G++ +L EA +WY +AAE +V + YN
Sbjct: 130 YEKSFEYYMKAAVKGDEVAQFHVGLLYENGQGIEKSLTEALKWYEKAAEQNHVDSQYNMG 189
Query: 236 LCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 278
L Y S GEG+ ++ K ++ A+ G AQ H LG L+ G
Sbjct: 190 LIYFSGGEGVDPQLEKSFKIFEKLANIGLTDAQ--HILGFLYVNG 232
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 40/160 (25%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLAL--------------CLHRGRGVDF------------ 210
EE VK A+ G+V AQY L L CL + +DF
Sbjct: 70 EELVK----AADEGNVSAQYHLGLYHFDMREYEKCIEYCL-KAAELDFVPASTFLGYCYS 124
Query: 211 ----NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ +++ +Y++AA G A ++ L Y G+G+ S +A KW ++AA+ H +
Sbjct: 125 TLKQDYEKSFEYYMKAAVKGDEVAQFHVGLLYENGQGIEKSLTEALKWYEKAAEQNHVDS 184
Query: 267 QLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHV 301
Q GL F+ GE + K+ E G T A H+
Sbjct: 185 QYNMGLIYFSGGEGVDPQLEKSFKIFEKLANIGLTDAQHI 224
>gi|283856194|ref|YP_161868.2| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|283775190|gb|AAV88757.2| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 276
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAV 165
R GR V+ D K A RG A G Y + E A+S Y+++A
Sbjct: 22 RIGVGRVVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSAS 81
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G AQ A + ++AV +A+ G AQY LA+ + GRGV N
Sbjct: 82 QGYAPAQAALGYAYSSGLGVTHDDQQAVSFFQKAANQGLAEAQYSLAIAYYTGRGVTQNY 141
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++A+ W+ R+A G+V A + + Y G G+P +A W +AAD G+ AQ GL
Sbjct: 142 EQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGL 201
Query: 273 GLFTEGEMMK 282
++ EG+++K
Sbjct: 202 -IYHEGKVVK 210
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+A S K+ N L + ++ + + GRGV +N ++A F + A +G A
Sbjct: 107 QAVSFFQKAANQGLAEAQYSLAIA-----YYTGRGVTQNYEQASFWFQRSANQGFVPAQF 161
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
G+MY R A + P + + A+ ++A+ G+ AQY L L
Sbjct: 162 YLGVMY-------------RNGAGI------PEDDDRALFWFHKAADKGYADAQYNLGLI 202
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
H G+ V + ++A WY +AA G V A +N + Y G+G+ +A W+++AAD
Sbjct: 203 YHEGKVVKKDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGVQKDKDKATFWLEKAADK 262
Query: 262 GHGKAQ 267
G AQ
Sbjct: 263 GDSHAQ 268
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 28/243 (11%)
Query: 87 VCKSWNDALR-PLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
V K D L+ PL+ +A G + G+ V K+ ++A+ + K A++G A
Sbjct: 28 VVKMTRDGLKSPLQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQKSASQGYAPA 87
Query: 140 MVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKL 182
G Y + A+S +++AA G AQ + N E+A
Sbjct: 88 QAALGYAYSSGLGVTHDDQQAVSFFQKAANQGLAEAQYSLAIAYYTGRGVTQNYEQASFW 147
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+++ G V AQ+ L + G G+ + A W+ +AA+ GY A YN L Y G+
Sbjct: 148 FQRSANQGFVPAQFYLGVMYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGLIYHEGK 207
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
+ +QA W ++AA+ G +A+ G+ G + + KA +LE A G++ A
Sbjct: 208 VVKKDEKQATFWYQQAANQGLVEAEFNLGIAYLKGQGVQKDKDKATFWLEKAADKGDSHA 267
Query: 299 DHV 301
V
Sbjct: 268 QDV 270
>gi|255068262|ref|ZP_05320117.1| TPR repeat protein [Neisseria sicca ATCC 29256]
gi|255047454|gb|EET42918.1| TPR repeat protein [Neisseria sicca ATCC 29256]
Length = 384
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G+GV ++ +KA++ A +G A + G+MY + A ++AA G AQ
Sbjct: 99 GQGVNQDHEKAMEWCRSAADKGYLPAQNNLGMMYGVLKNYVEATKWLQKAAEQGSVNAQK 158
Query: 174 -------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
N EEA + +A++ G AQY L + GRGV N +EAA+WY
Sbjct: 159 NLGLMYEQGQGVRQNYEEAARWYSKAAVQGDANAQYHLGVMYANGRGVRQNYEEAAQWYR 218
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AAE G V A N Y G+G+ +A +W ++AA+ G+ AQ G+ ++EG+
Sbjct: 219 KAAEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVA-YSEGQG 277
Query: 281 MK-----AVVYLELATRAGETAADH 300
++ A+ + A G AA H
Sbjct: 278 VRQDYPEALRWYRKAAEQGFAAAQH 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GVR+N ++A + K A +G A G+MY E A YR+A
Sbjct: 161 GLMYEQGQGVRQNYEEAARWYSKAAVQGDANAQYHLGVMYANGRGVRQNYEEAAQWYRKA 220
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ ++ EAV+ +A+ G+V AQ L + G+GV
Sbjct: 221 AEQGDVDAQNNLGALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQ 280
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA RWY +AAE G+ A +N Y G+G+ ++ +A +W +AA+ G AQ
Sbjct: 281 DYPEALRWYRKAAEQGFAAAQHNLGEMYYEGKGVHQNYTEALQWYLKAAEQGFSPAQNRL 340
Query: 271 GLGLFTEGE 279
G ++ EG+
Sbjct: 341 GE-MYEEGQ 348
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +GRGVR+N ++A + K A +G A + G +Y E D EA + YR+
Sbjct: 197 GVMYANGRGVRQNYEEAAQWYRKAAEQGDVDAQNNLGALYDEGQGVRQDSAEA-VRWYRK 255
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EA++ +A+ G AQ+ L + G+GV
Sbjct: 256 AAERGYVVAQNNLGVAYSEGQGVRQDYPEALRWYRKAAEQGFAAAQHNLGEMYYEGKGVH 315
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N EA +WYL+AAE G+ A Y G+G+P + + A++W K+A D G
Sbjct: 316 QNYTEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVPKNRKVAKEWHKKACDNG 368
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEA 155
EA V + G + G GVR++ +A+ + K A +G A + +MY+ E
Sbjct: 49 EADVQVVLGSMYLRGIGVRQSDQEAVRWYRKAAEQGRAEAQYNLCMMYYVGQGVNQDHEK 108
Query: 156 AISLYRQAAVLGDPAAQP---------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
A+ R AA G AQ N EA K L +A+ G V AQ L L +G+
Sbjct: 109 AMEWCRSAADKGYLPAQNNLGMMYGVLKNYVEATKWLQKAAEQGSVNAQKNLGLMYEQGQ 168
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV N +EAARWY +AA G A Y+ + Y+ G G+ ++ +A +W ++AA+ G A
Sbjct: 169 GVRQNYEEAARWYSKAAVQGDANAQYHLGVMYANGRGVRQNYEEAAQWYRKAAEQGDVDA 228
Query: 267 QLEHGLGLFTEGEMMK 282
Q G L+ EG+ ++
Sbjct: 229 QNNLG-ALYDEGQGVR 243
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+K + Q + AG Q L RG GV + QEA RWY +AAE G A YN + Y
Sbjct: 38 LKKIVQRAEAGEADVQVVLGSMYLRGIGVRQSDQEAVRWYRKAAEQGRAEAQYNLCMMYY 97
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
G+G+ H +A +W + AAD G+ AQ G+ ++A +L+ A G A
Sbjct: 98 VGQGVNQDHEKAMEWCRSAADKGYLPAQNNLGMMYGVLKNYVEATKWLQKAAEQGSVNAQ 157
Query: 300 HVKNVILQQ 308
++ +Q
Sbjct: 158 KNLGLMYEQ 166
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR++ +A+ + K A RG +A + G+ Y E D EA + YR+
Sbjct: 233 GALYDEGQGVRQDSAEAVRWYRKAAERGYVVAQNNLGVAYSEGQGVRQDYPEA-LRWYRK 291
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AAQ N EA++ +A+ G AQ +L G+GV
Sbjct: 292 AAEQGFAAAQHNLGEMYYEGKGVHQNYTEALQWYLKAAEQGFSPAQNRLGEMYEEGQGVP 351
Query: 210 FNLQEAARWYLRAAEGGY 227
N + A W+ +A + G+
Sbjct: 352 KNRKVAKEWHKKACDNGF 369
>gi|326920893|ref|XP_003206701.1| PREDICTED: protein sel-1 homolog 1-like, partial [Meleagris
gallopavo]
Length = 767
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 361 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKAADMGN 420
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 421 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 480
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 481 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 540
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 541 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 574
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 236 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 295
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 296 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFVAEKGDVQAQVGLGQ 355
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + +P ++ A ++ K+A
Sbjct: 356 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQNNETALQYFKKA 415
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 416 ADMGNPVGQ--SGLGM 429
>gi|260753303|ref|YP_003226196.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552666|gb|ACV75612.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 274
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQP--ANA----------- 176
G+ A D G Y+ D K+A IS Y++AA G P AQ NA
Sbjct: 45 GNPKAQTDLGTAYYNGQGMAQDYKQA-ISWYQKAANQGYPLAQYYLGNACLQGIGVTQSD 103
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+AV +A+ G AQY LA+ + GRGV N +A+ W+ R+A G+V A + +
Sbjct: 104 EQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGV 163
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y G G+P +A W +AAD G+ AQ GL ++ EG+++K
Sbjct: 164 MYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGL-IYHEGKVVK 208
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
GRGV +N +A F + A +G A G+MY R A + P
Sbjct: 132 GRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMY-------------RNGAGI------P 172
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ + A+ ++A+ G+ AQY L L H G+ V + ++A WY +AA G V A +N
Sbjct: 173 EDDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFN 232
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G+G+ +A W+++AAD G AQ
Sbjct: 233 LGIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQ 266
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ ++ +A+ + K A +G LA G + E A+S Y++A
Sbjct: 54 GTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGVTQSDEQAVSWYQKA 113
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + N +A +++ G V AQ+ L + G G+
Sbjct: 114 ANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPE 173
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A W+ +AA+ GY A YN L Y G+ + +QA W ++AA+ G +A+
Sbjct: 174 DDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQATFWYQQAANQGLVEAEFNL 233
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHV 301
G+ G + + KA +LE A G++ A V
Sbjct: 234 GIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQDV 268
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L Q + AG+ +AQ L + G+G+ + ++A WY +AA GY A Y G
Sbjct: 38 LEQKARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGI 97
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
G+ S QA W ++AA+ G +AQ + +T
Sbjct: 98 GVTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYT 131
>gi|167629295|ref|YP_001679794.1| tpr repeat, sel1 subfamily [Heliobacterium modesticaldum Ice1]
gi|167592035|gb|ABZ83783.1| tpr repeat, sel1 subfamily, putative [Heliobacterium modesticaldum
Ice1]
Length = 221
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 91 WNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG 144
++ AL LR+A +W R + GRGV ++ +A++ F + A +G LA +
Sbjct: 11 YDPALSALRQAAEGGDAEAQYQWALRCEEGRGVPQSAKQAVEWFARAAEQGHGLAQLSLA 70
Query: 145 LMYWEM-----DKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQA 186
++Y + D+ EAA Y +AA G AQ + A+ +A
Sbjct: 71 MLYEDGTGLAPDEAEAA-RWYERAAAQGIAEAQLYLARLFAEGRGVDRDDSRALAWYRKA 129
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
+ G AQ++LAL G+GV+ + EA RWY AAE G++ A +N + Y G+GLP
Sbjct: 130 AEQGEADAQFELALLYALGQGVEKDDAEAVRWYRLAAEQGHMDAQFNLAFMYEEGQGLPQ 189
Query: 247 SHRQARKWMKRAADCGHGKAQ 267
++A W ++AA+ G +AQ
Sbjct: 190 DRKEALAWYRKAAEQGDEEAQ 210
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+S RQAA GD AQ P +A++AV+ +A+ GH AQ LA+
Sbjct: 14 ALSALRQAAEGGDAEAQYQWALRCEEGRGVPQSAKQAVEWFARAAEQGHGLAQLSLAMLY 73
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G G+ + EAARWY RAA G A + ++ G G+ +A W ++AA+ G
Sbjct: 74 EDGTGLAPDEAEAARWYERAAAQGIAEAQLYLARLFAEGRGVDRDDSRALAWYRKAAEQG 133
Query: 263 HGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
AQ E + LG E + +AV + LA G A + ++ +DR
Sbjct: 134 EADAQFELALLYALGQGVEKDDAEAVRWYRLAAEQGHMDAQFNLAFMYEEGQGLPQDR 191
>gi|417666054|ref|ZP_12315615.1| tetratricopeptide repeat family protein [Escherichia coli STEC_O31]
gi|397786390|gb|EJK97227.1| tetratricopeptide repeat family protein [Escherichia coli STEC_O31]
Length = 328
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 65 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 122
Query: 155 AAISLYRQAAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLAL 200
A S Y +AA P AQ ANA V+ YQ A+ AQ+ L +
Sbjct: 123 AK-SWYEKAAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGM 180
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 181 LYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAE 240
Query: 261 CGHGKAQLEHGLGLFTEGE 279
GH AQ G+ ++ GE
Sbjct: 241 KGHVDAQYNLGV-IYENGE 258
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 123 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 182
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ K E +RQA + AA + AQY L + G+G
Sbjct: 183 Y---KGEGVKQNFRQAREWFEKAASQ----------------NQLNAQYNLGQIYYYGQG 223
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ
Sbjct: 224 VTQSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQ 283
Query: 268 LEHGLGLFTE 277
E LG+ E
Sbjct: 284 FE--LGVMNE 291
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 159 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIY 218
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 219 Y---YGQGVTQSYRQAKDWFEKAAEK----------------GHVDAQYNLGVIYENGEG 259
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 260 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 314
>gi|224051584|ref|XP_002200585.1| PREDICTED: protein sel-1 homolog 1 [Taeniopygia guttata]
Length = 791
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGN 445
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQA 505
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 565
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 566 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 599
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 261 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 320
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 321 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 380
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + +P S+ A ++ K+A
Sbjct: 381 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKA 440
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 441 ADMGNPVGQ--SGLGM 454
>gi|397676941|ref|YP_006518479.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397630|gb|AFN56957.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 274
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQP--ANA----------- 176
G+ A D G Y+ D K+A IS Y++AA G P AQ NA
Sbjct: 45 GNPKAQTDLGTAYYNGQGMAQDYKQA-ISWYQKAANQGYPLAQYYLGNACLQGIGLTQSD 103
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+AV +A+ G AQY LA+ + GRGV N +A+ W+ R+A G+V A + +
Sbjct: 104 EQAVSWYQKAANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGV 163
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y G G+P +A W +AAD G+ AQ GL ++ EG+++K
Sbjct: 164 MYRNGAGIPEDDDRALFWFHKAADKGYADAQYNLGL-IYHEGKVVK 208
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
GRGV +N +A F + A +G A G+MY R A + P
Sbjct: 132 GRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMY-------------RNGAGI------P 172
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ + A+ ++A+ G+ AQY L L H G+ V + ++AA WY +AA G V A +N
Sbjct: 173 EDDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQAAFWYQQAANQGLVEAEFN 232
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G+G+ +A W+++AAD G AQ
Sbjct: 233 LGIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQ 266
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+G+ ++ +A+ + K A +G LA G + E A+S Y++A
Sbjct: 54 GTAYYNGQGMAQDYKQAISWYQKAANQGYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKA 113
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + N +A +++ G V AQ+ L + G G+
Sbjct: 114 ANQGLAEAQYSLAIAYYTGRGVTQNYGQASFWFQRSANQGFVPAQFYLGVMYRNGAGIPE 173
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A W+ +AA+ GY A YN L Y G+ + +QA W ++AA+ G +A+
Sbjct: 174 DDDRALFWFHKAADKGYADAQYNLGLIYHEGKVVKKDEKQAAFWYQQAANQGLVEAEFNL 233
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHV 301
G+ G + + KA +LE A G++ A V
Sbjct: 234 GIAYLKGQGVQKDKDKATFWLEKAADKGDSHAQDV 268
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 171 AQPANAEEAVK-----LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
AQ AN+ + V L Q + AG+ +AQ L + G+G+ + ++A WY +AA
Sbjct: 21 AQTANSTKVVAGKTALSLEQKARAGNPKAQTDLGTAYYNGQGMAQDYKQAISWYQKAANQ 80
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
GY A Y G GL S QA W ++AA+ G +AQ + +T
Sbjct: 81 GYPLAQYYLGNACLQGIGLTQSDEQAVSWYQKAANQGLAEAQYSLAIAYYT 131
>gi|395503786|ref|XP_003756243.1| PREDICTED: protein sel-1 homolog 1 [Sarcophilus harrisii]
Length = 848
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 442 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 501
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 502 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 561
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 562 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMSAYNSY 621
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 622 KDGDSNAAVVQYLLLAEQGYEVAQSNAAFILDQK 655
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 168 DPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEG 225
+P EE + YQ + G V+AQ L L LH GRGV+ N Q A ++ AA
Sbjct: 403 NPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANA 462
Query: 226 GYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
G AM YS G + P S+ A + K+AAD G+ Q GLG+
Sbjct: 463 GNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQ--SGLGM 510
>gi|303272481|ref|XP_003055602.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463576|gb|EEH60854.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 251
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV +N+D AL+ + K A +G +A +AG+++ E + E A + +AA G
Sbjct: 73 GICYRHGHGVEQNIDTALEWYTKSAEKGHAVAQNNAGVVHHEKGQHEEAFKWFMKAADQG 132
Query: 168 -------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
D N EAVK +A+ GH AQ + C+H + +E
Sbjct: 133 FTHAAAKLGKCYKDGLGVEKNIPEAVKWYTKAAEQGHAGAQNSVG-CIHNDKE---QYEE 188
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A +WY++AA G+ A N + Y+ G G+ + +A KW +AA+ G
Sbjct: 189 AFKWYMKAANQGFTDAAVNLGIYYADGLGVEKNIPEAIKWYAKAAEKG 236
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 23/151 (15%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
V K DKALD + +GA +G D G+ YR G Q N
Sbjct: 46 VAKRYDKALDWYHRGARQGCEYCENDIGI-------------CYRH----GHGVEQ--NI 86
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ A++ +++ GH AQ + +H +G +EA +W+++AA+ G+ A
Sbjct: 87 DTALEWYTKSAEKGHAVAQNNAGV-VHHEKG---QHEEAFKWFMKAADQGFTHAAAKLGK 142
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
CY G G+ + +A KW +AA+ GH AQ
Sbjct: 143 CYKDGLGVEKNIPEAVKWYTKAAEQGHAGAQ 173
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ +C G GV+ N+ A WY ++AE G+ A N + + H +A KW +
Sbjct: 72 IGICYRHGHGVEQNIDTALEWYTKSAEKGHAVAQNNAGVVHH----EKGQHEEAFKWFMK 127
Query: 258 AADCG--HGKAQLE--HGLGLFTEGEMMKAVVYLELATRAGETAA 298
AAD G H A+L + GL E + +AV + A G A
Sbjct: 128 AADQGFTHAAAKLGKCYKDGLGVEKNIPEAVKWYTKAAEQGHAGA 172
>gi|303325650|ref|ZP_07356093.1| TPR repeat protein [Desulfovibrio sp. 3_1_syn3]
gi|302863566|gb|EFL86497.1| TPR repeat protein [Desulfovibrio sp. 3_1_syn3]
Length = 345
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQ 162
WG G+GVR+N +A F K A +G +A + G +Y + K E AAI Y +
Sbjct: 103 WGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGYLYAYGRGVPKDENAAIDWYSR 162
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + + +AV +A+ +++AQ LA GRG
Sbjct: 163 AANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAAEQDNLKAQNNLAYMYAEGRGYA 222
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A +WY RAAE GY A YN Y G G+P + +A +W ++AA+ AQ
Sbjct: 223 QDPVKAVQWYNRAAERGYAEAQYNLGFMYEQGRGVPQDYNKAVEWYRKAAEQNEPAAQYS 282
Query: 270 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 301
GL ++ +G + +A + LA + G+ A V
Sbjct: 283 LGL-MYDQGTGVPRNLSEATRWYRLAAKNGDPDAKAV 318
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ A +L QA+ G + AQ G+GV N +EAARW+ +AAE G A YN
Sbjct: 82 QRAAQLFRQAAEKGDISAQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGY 141
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM---KAVVYLELAT 291
Y++G G+P A W RAA+ G AQ G L ++GE KAV + E A
Sbjct: 142 LYAYGRGVPKDENAAIDWYSRAANQGLADAQYSLGWTYLNSKGENQSDTKAVHWFEKAA 200
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A + A+ +AV LL + G+ A Y L G+GV + Q AA+ + +AAE G +
Sbjct: 39 AIEKADYGKAVALLKPLADKGNAEALYVLGRLTLDGKGVKKSEQRAAQLFRQAAEKGDIS 98
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A + G+G+ ++R+A +W ++AA+ G AQ G L+ G
Sbjct: 99 AQNAWGTAQASGQGVRRNYREAARWFRKAAEQGLAMAQYNLGY-LYAYG 146
>gi|329119951|ref|ZP_08248623.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327463864|gb|EGF10178.1| Sel1 repeat superfamily protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 354
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 95 LRPLREAMVLL----RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
++PL + +++ G + HGRGV +N +A F K A +G + + G+M E
Sbjct: 56 MQPLAQQGIIVSAQHNLGLLYFHGRGVAQNYQQAAAWFQKAADQGYADSQFNLGIMSAEG 115
Query: 150 ---MDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVR 193
M + A + +++AA G AQ P N ++A +A+ GH
Sbjct: 116 LGMMQNHQQAATWFQKAAGQGHADAQFRLAKLYAWGLGVPQNHQQAAAWFQKAANQGHAD 175
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ LA G GV + Q+AA W+ +AAE G+ +A Y G+G+ +++QA
Sbjct: 176 AQLFLASMYAEGIGVAQDRQQAAAWFQKAAEQGHAKAQVYLGSMYRTGDGVKRNYQQALA 235
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
W ++AA+ G AQ GL ++ GE +K
Sbjct: 236 WYRKAANQGDADAQFYLGL-MYRIGEGVK 263
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGH-VRAQYQLALCLHRGRGVDFNLQEAARW 218
+RQA + A Q N ++A L+ + G V AQ+ L L GRGV N Q+AA W
Sbjct: 37 FRQA----NAAYQAGNYQQAFHLMQPLAQQGIIVSAQHNLGLLYFHGRGVAQNYQQAAAW 92
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGL 274
+ +AA+ GY + +N + + G G+ +H+QA W ++AA GH AQ + GL
Sbjct: 93 FQKAADQGYADSQFNLGIMSAEGLGMMQNHQQAATWFQKAAGQGHADAQFRLAKLYAWGL 152
Query: 275 FTEGEMMKAVVYLELATRAGETAA 298
+A + + A G A
Sbjct: 153 GVPQNHQQAAAWFQKAANQGHADA 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISL 159
R K + G GV +N +A F K A +G A + MY E D+++AA +
Sbjct: 142 FRLAKLYAWGLGVPQNHQQAAAWFQKAANQGHADAQLFLASMYAEGIGVAQDRQQAA-AW 200
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+++AA G AQ N ++A+ +A+ G AQ+ L L G
Sbjct: 201 FQKAAEQGHAKAQVYLGSMYRTGDGVKRNYQQALAWYRKAANQGDADAQFYLGLMYRIGE 260
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
GV N Q+A WY +AA+ G A + Y+ GEG+ + +QA +W +
Sbjct: 261 GVKRNYQQALAWYRKAADQGQADAQNELGIMYAAGEGVAKNDQQAIEWFNK 311
>gi|306814141|ref|ZP_07448309.1| hypothetical protein ECNC101_18901 [Escherichia coli NC101]
gi|432513295|ref|ZP_19750530.1| hypothetical protein A17M_01152 [Escherichia coli KTE224]
gi|432698408|ref|ZP_19933573.1| hypothetical protein A31M_01154 [Escherichia coli KTE169]
gi|432745027|ref|ZP_19979725.1| hypothetical protein WGG_01152 [Escherichia coli KTE43]
gi|432971215|ref|ZP_20160090.1| hypothetical protein A15O_01786 [Escherichia coli KTE207]
gi|433082886|ref|ZP_20269350.1| hypothetical protein WIW_02035 [Escherichia coli KTE133]
gi|433144595|ref|ZP_20329741.1| hypothetical protein WKO_02130 [Escherichia coli KTE168]
gi|305852506|gb|EFM52956.1| hypothetical protein ECNC101_18901 [Escherichia coli NC101]
gi|431044334|gb|ELD54614.1| hypothetical protein A17M_01152 [Escherichia coli KTE224]
gi|431245732|gb|ELF40011.1| hypothetical protein A31M_01154 [Escherichia coli KTE169]
gi|431294003|gb|ELF84285.1| hypothetical protein WGG_01152 [Escherichia coli KTE43]
gi|431485471|gb|ELH65133.1| hypothetical protein A15O_01786 [Escherichia coli KTE207]
gi|431602493|gb|ELI71925.1| hypothetical protein WIW_02035 [Escherichia coli KTE133]
gi|431662072|gb|ELJ28881.1| hypothetical protein WKO_02130 [Escherichia coli KTE168]
Length = 378
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 115 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 172
Query: 155 AAISLYRQAAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLAL 200
A S Y +AA P AQ ANA V+ YQ A+ AQ+ L +
Sbjct: 173 AK-SWYEKAAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGM 230
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 231 LYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAE 290
Query: 261 CGHGKAQLEHGLGLFTEGE 279
GH AQ G+ ++ GE
Sbjct: 291 KGHVDAQYNLGV-IYENGE 308
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ K E +RQA + AA + AQY L + G+G
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQ----------------NQLNAQYNLGQIYYYGQG 273
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ
Sbjct: 274 VTQSYRQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQ 333
Query: 268 LEHGLGLFTE 277
E LG+ E
Sbjct: 334 FE--LGVMNE 341
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 209 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRQAKYWFEKAAEK----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 310 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 364
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V AQY L L G +D + Q+A WY +AA+ RA + Y+ G G+ ++
Sbjct: 40 GDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANGLGVNQDYQ 99
Query: 250 QARKWMKRAADCGHGKAQL------EHGLGL 274
Q++ W ++AA AQ + GLG+
Sbjct: 100 QSKLWYEKAAAQNDVDAQFLLGEMYDDGLGV 130
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 29/152 (19%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQPANA 176
D L S G A GLMY ++D ++A I Y +AA DP
Sbjct: 27 DSTLSSLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDP------- 78
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
RAQ +L + G GV+ + Q++ WY +AA V A +
Sbjct: 79 ----------------RAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGE 122
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
Y G G+ ++ A+ W ++AA +AQ+
Sbjct: 123 MYDDGLGVSQDYQHAKMWYEKAAAQNDERAQV 154
>gi|397676939|ref|YP_006518477.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397628|gb|AFN56955.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 241
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 165 VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
VLG+ A P + E+AV +A+ G +QY L GRGV + ++AA WY
Sbjct: 47 VLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGNAYLYGRGVGIDYEKAAFWYR 106
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-- 278
+AA+ +++A YN L Y G+GLP S QA W ++AA+ G KAQ LG+F
Sbjct: 107 KAADQNFIQAQYNLGLLYEKGQGLPKSDEQAAFWWQKAAEQGEAKAQFN--LGVFYHNGR 164
Query: 279 ----EMMKAVVYLELATRAG 294
++A+ ++E A + G
Sbjct: 165 AVPKNNVRAIFWMEQAAQQG 184
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 27/207 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + HGRG ++ +KA+ + K A +G + + G Y LY + +
Sbjct: 49 GEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGNAY-----------LYGRGVGI- 96
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ E+A +A+ ++AQY L L +G+G+ + ++AA W+ +AAE G
Sbjct: 97 -------DYEKAAFWYRKAADQNFIQAQYNLGLLYEKGQGLPKSDEQAAFWWQKAAEQGE 149
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEGEMMKA 283
+A +N + Y G +P ++ +A WM++AA G AQ+ + G + KA
Sbjct: 150 AKAQFNLGVFYHNGRAVPKNNVRAIFWMEQAAQQGLIDAQILLAMAYASGQGAPKDKNKA 209
Query: 284 VVYLELATRAGETAADHVKNVILQQLS 310
+ + + A G AA V LQ LS
Sbjct: 210 IYWYQKAADQGNIAAKEV----LQTLS 232
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG+ A+ L GRG + ++A WY +AA+ G + YN Y +G G+ + +
Sbjct: 39 AGNSLAEEVLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGNAYLYGRGVGIDY 98
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKN 303
+A W ++AAD +AQ GL L+ +G+ + +A + + A GE A
Sbjct: 99 EKAAFWYRKAADQNFIQAQYNLGL-LYEKGQGLPKSDEQAAFWWQKAAEQGEAKAQFNLG 157
Query: 304 VILQQLSATSRDR 316
V A ++
Sbjct: 158 VFYHNGRAVPKNN 170
>gi|335419792|ref|ZP_08550839.1| Sel1 domain-containing protein [Salinisphaera shabanensis E1L3A]
gi|334896003|gb|EGM34161.1| Sel1 domain-containing protein [Salinisphaera shabanensis E1L3A]
Length = 325
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ+ L C +G GV N +AARWYL+AA+ G V A N ++ Y G G+ S
Sbjct: 144 GHASAQFYLGWCYDKGVGVTQNESKAARWYLKAAKKGQVDAQVNLAVNYIDGRGVQKSQA 203
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTE------GEMMKAVVYLELATRAGETAADHVKN 303
QAR+W RAA AQ + LG ++ G +++A V+ LA G AA +
Sbjct: 204 QARRWFLRAAQQNSAIAQ--YNLGKLSQARASSRGNIIEAYVWTSLAAEQGLGAAIRERE 261
Query: 304 VILQQLSATSRDRAMLVVDSWRAMPS 329
++ +S + RA V W + S
Sbjct: 262 LLRSLISPSQLSRAQARVRRWSKINS 287
>gi|189502235|ref|YP_001957952.1| hypothetical protein Aasi_0852 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497676|gb|ACE06223.1| hypothetical protein Aasi_0852 [Candidatus Amoebophilus asiaticus
5a2]
Length = 789
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 63/256 (24%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L+ G ++ +G GV ++ KA++ F K A +G+ A + G+MY E D ++ +
Sbjct: 378 LKVGAKYFNGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMYGNGKGVEKDARKE-LEW 436
Query: 160 YRQAAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGR 206
Y +AA GD +AQ AN + +A++ +A+ G AQ+ L + +GR
Sbjct: 437 YERAARKGDASAQYNLGQIYANGQGVAKDYVKAIEWYEKAANQGDASAQFNLGVMYGKGR 496
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMY---------------------------------- 232
GV+ + ++A WY +AA+ GY A Y
Sbjct: 497 GVEKDEKKAVEWYKKAADQGYAPAQYSLGCMYANVQRVVKNDKKAIEWYKKAANQRHAEA 556
Query: 233 --NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAV 284
N + Y+ G G+ ++A KW K+AAD G+ KAQ E+G G+ + + KAV
Sbjct: 557 QSNLGIMYANGRGIAKDEKKAVKWYKKAADQGNAKAQFYLGVRYENGRGVAKDEK--KAV 614
Query: 285 VYLELATRAGETAADH 300
+ E A G T A +
Sbjct: 615 EWYEKAAEQGHTGAQN 630
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G+GV K+ A++ + K A +G A + G+MY E D +A I Y +
Sbjct: 309 GVMYEKGQGVAKDARNAVEWYQKAANQGHARAQFELGMMYDYGKGVEKDTSKA-IEWYEK 367
Query: 163 AAVLGDPAAQPA------NAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ N E +AV+ +A+ G++ AQY L + G+GV+
Sbjct: 368 AANQGHADAQLKVGAKYFNGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMYGNGKGVE 427
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++ WY RAA G A YN Y+ G+G+ + +A +W ++AA+ G AQ
Sbjct: 428 KDARKELEWYERAARKGDASAQYNLGQIYANGQGVAKDYVKAIEWYEKAANQGDASAQFN 487
Query: 270 ----HGLGLFTEGEMMKAVVYLELATRAGETAADH 300
+G G E + KAV + + A G A +
Sbjct: 488 LGVMYGKGRGVEKDEKKAVEWYKKAADQGYAPAQY 522
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W + +A G + GRGV K+ KA++ + K A +G A G MY +
Sbjct: 472 WYEKAANQGDASAQFNLGVMYGKGRGVEKDEKKAVEWYKKAADQGYAPAQYSLGCMYANV 531
Query: 151 ------DKKEAAISLYRQAAVLGDPAAQP------ANA-------EEAVKLLYQASIAGH 191
DKK AI Y++AA AQ AN ++AVK +A+ G+
Sbjct: 532 QRVVKNDKK--AIEWYKKAANQRHAEAQSNLGIMYANGRGIAKDEKKAVKWYKKAADQGN 589
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
+AQ+ L + GRGV + ++A WY +AAE G+ A N Y G+G+ + +A
Sbjct: 590 AKAQFYLGVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNNLGDMYENGKGVAKDYVKA 649
Query: 252 RKWMKRAADCGHGKAQ 267
+W ++ A+ GH AQ
Sbjct: 650 VEWFEKVANQGHALAQ 665
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
H AQY++ + +G+GV + + A WY +AA G+ RA + + Y +G+G+ +
Sbjct: 301 HAHAQYKVGVMYEKGQGVAKDARNAVEWYQKAANQGHARAQFELGMMYDYGKGVEKDTSK 360
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHVKNVIL 306
A +W ++AA+ GH AQL+ G F EG + +KAV + + A G A + V+
Sbjct: 361 AIEWYEKAANQGHADAQLKVGAKYFNGEGVAQDYIKAVEWFQKAANQGNLDAQYNLGVMY 420
Query: 307 QQLSATSRD 315
+D
Sbjct: 421 GNGKGVEKD 429
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAA 171
V KN KA++ + K A + A + G+MY D+K+A + Y++AA G+ A
Sbjct: 534 VVKNDKKAIEWYKKAANQRHAEAQSNLGIMYANGRGIAKDEKKA-VKWYKKAADQGNAKA 592
Query: 172 Q-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
Q + ++AV+ +A+ GH AQ L G+GV + +A W
Sbjct: 593 QFYLGVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNNLGDMYENGKGVAKDYVKAVEW 652
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGL 272
+ + A G+ A YN + Y +G+G+ ++++A KW +++A G+ A+ HG
Sbjct: 653 FEKVANQGHALAQYNLARMYDYGQGVVQNYQEAVKWYEKSAGQGNNYAKAYLGRMYYHGF 712
Query: 273 GL 274
G+
Sbjct: 713 GV 714
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+++GRGV K+ KA++ + K A +G T A + G MY E K A +
Sbjct: 597 GVRYENGRGVAKDEKKAVEWYEKAAEQGHTGAQNNLGDMY-ENGKGVAKDYV-------- 647
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+AV+ + + GH AQY LA G+GV N QEA +WY ++A G
Sbjct: 648 ----------KAVEWFEKVANQGHALAQYNLARMYDYGQGVVQNYQEAVKWYEKSAGQGN 697
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A Y G G+ + QA K ++ A H K++ E G
Sbjct: 698 NYAKAYLGRMYYHGFGVEKNLLQASKLIQEA--ISHMKSKAEEG 739
>gi|255068260|ref|ZP_05320115.1| TPR repeat protein [Neisseria sicca ATCC 29256]
gi|255047452|gb|EET42916.1| TPR repeat protein [Neisseria sicca ATCC 29256]
Length = 376
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+G+R++ +A+ + K A +G A + G+MY E Q G
Sbjct: 45 GVMYEQGKGIRQDYTEAVQWYRKAAEQGQAEAQYNLGVMYAEG-----------QGVRQG 93
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D EAVK +A+ G AQY LA+ GRGV + EA RWY +AA+ GY
Sbjct: 94 DA--------EAVKWYRKAAELGLAEAQYNLAVMYTEGRGVRQDYVEAVRWYRKAADQGY 145
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A N Y G+G+ QA +W ++A + G AQ GL ++ EG
Sbjct: 146 AEAQNNLGAMYKDGKGIRQDDNQAVQWFRKAVEQGVDAAQYNLGL-MYYEG 195
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GVR+ +A+ + K A G A + +MY E D EA + YR+
Sbjct: 81 GVMYAEGQGVRQGDAEAVKWYRKAAELGLAEAQYNLAVMYTEGRGVRQDYVEA-VRWYRK 139
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + +AV+ +A G AQY L L + GRGV
Sbjct: 140 AADQGYAEAQNNLGAMYKDGKGIRQDDNQAVQWFRKAVEQGVDAAQYNLGLMYYEGRGVR 199
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A +WY +AAE GY A N + Y G+G+ + QA KW ++AA+ G+ +AQ
Sbjct: 200 QDYKQALQWYRKAAEQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYN 259
Query: 270 HGLGLFTEGEMMK-----AVVYLELATRAGETAADH 300
G G++ EG+ ++ AV + A G+ A +
Sbjct: 260 LG-GMYVEGQGVRQDDAQAVQWFRRAVEQGDANAQY 294
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +K G+G+R++ ++A+ F K +G A + GLMY+E D K+A + YR+
Sbjct: 153 GAMYKDGKGIRQDDNQAVQWFRKAVEQGVDAAQYNLGLMYYEGRGVRQDYKQA-LQWYRK 211
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + +AVK +A+ G+ AQY L G+GV
Sbjct: 212 AAEQGYKDAQNNLGVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGGMYVEGQGVR 271
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A +W+ RA E G A Y+ L Y+ G G+ + Q + +AA HG A+ +
Sbjct: 272 QDDAQAVQWFRRAVEQGDANAQYSLGLMYAKGLGVRQDYVQTLQLWHKAAR--HGVAEAQ 329
Query: 270 HGLG 273
GLG
Sbjct: 330 SGLG 333
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
E A K + + + AG AQ+ L + +G+G+ + EA +WY +AAE G A YN
Sbjct: 22 GEVAQKEMLRMAEAGDAGAQFSLGVMYEQGKGIRQDYTEAVQWYRKAAEQGQAEAQYNLG 81
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGE 295
+ Y+ G+G+ +A KW ++AA+ G +AQ + ++TEG ++ Y+E A R
Sbjct: 82 VMYAEGQGVRQGDAEAVKWYRKAAELGLAEAQYNLAV-MYTEGRGVRQ-DYVE-AVRWYR 138
Query: 296 TAADHVKNVILQQLSATSRD 315
AAD L A +D
Sbjct: 139 KAADQGYAEAQNNLGAMYKD 158
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G +K G+GVRK+ +A+ + K A +G+ A + G MY E + + +A A+ +R+A
Sbjct: 225 GVMYKDGKGVRKDYVQAVKWYRKAAEQGNAEAQYNLGGMYVEGQGVRQDDAQAVQWFRRA 284
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
GD AQ + + + ++L ++A+ G AQ L + GRGV
Sbjct: 285 VEQGDANAQYSLGLMYAKGLGVRQDYVQTLQLWHKAARHGVAEAQSGLGWMYYTGRGVRQ 344
Query: 211 NLQEAARWYLRAAEGGY 227
N A WY +A + G+
Sbjct: 345 NSVIAKEWYKKACDNGF 361
>gi|91210161|ref|YP_540147.1| hypothetical protein UTI89_C1133 [Escherichia coli UTI89]
gi|386605031|ref|YP_006111331.1| hypothetical protein UM146_12250 [Escherichia coli UM146]
gi|432553054|ref|ZP_19789783.1| hypothetical protein A1S3_01445 [Escherichia coli KTE47]
gi|432573037|ref|ZP_19809527.1| hypothetical protein A1SI_01731 [Escherichia coli KTE55]
gi|91071735|gb|ABE06616.1| hypothetical protein UTI89_C1133 [Escherichia coli UTI89]
gi|307627515|gb|ADN71819.1| hypothetical protein UM146_12250 [Escherichia coli UM146]
gi|431085771|gb|ELD91875.1| hypothetical protein A1S3_01445 [Escherichia coli KTE47]
gi|431110245|gb|ELE14172.1| hypothetical protein A1SI_01731 [Escherichia coli KTE55]
Length = 378
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 115 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 172
Query: 155 AAISLYRQAAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLAL 200
A S Y +AA P AQ ANA V+ YQ A+ AQ+ L +
Sbjct: 173 AK-SWYEKAAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGM 230
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 231 LYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAE 290
Query: 261 CGHGKAQLEHGLGLFTEGE 279
GH AQ G+ ++ GE
Sbjct: 291 KGHVDAQYNLGV-IYENGE 308
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV ++ +A + K AA+ S A G++Y + E Y+QA + A
Sbjct: 160 YAKGNGVEQDYRQAKSWYEKAAAQNSPDAQFALGILYANANGVEQD---YQQAKDWYEKA 216
Query: 171 AQP--ANAEEAVKLLY------------------QASIAGHVRAQYQLALCLHRGRGVDF 210
A+ ANA+ + +LY +A+ + AQY L + G+GV
Sbjct: 217 AEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQ 276
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ E
Sbjct: 277 SYRQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE- 335
Query: 271 GLGLFTE 277
LG+ E
Sbjct: 336 -LGVMNE 341
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 209 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRQAKYWFEKAAEK----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 310 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 364
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V AQY L L G +D + Q+A WY +AA+ RA + Y+ G G+ ++
Sbjct: 40 GDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANGLGVNQDYQ 99
Query: 250 QARKWMKRAADCGHGKAQL------EHGLGL 274
Q++ W ++AA AQ + GLG+
Sbjct: 100 QSKLWYEKAAAQNDVDAQFLLGEMYDDGLGV 130
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 29/152 (19%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQPANA 176
D L G A GLMY ++D ++A I Y +AA DP
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDP------- 78
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
RAQ +L + G GV+ + Q++ WY +AA V A +
Sbjct: 79 ----------------RAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGE 122
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
Y G G+ ++ A+ W ++AA +AQ+
Sbjct: 123 MYDDGLGVSQDYQHAKMWYEKAAAQNDERAQV 154
>gi|449274840|gb|EMC83918.1| Protein sel-1 like protein 1, partial [Columba livia]
Length = 769
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +++AA +G+
Sbjct: 364 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKAADMGN 423
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 424 PVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 483
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 484 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 543
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 544 KDGDSNSAVVQYLLLAEQGYEVAQSNAAFILDQK 577
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 239 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 298
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 299 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 358
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + +P S+ A ++ K+A
Sbjct: 359 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDVVPQSNETALQYFKKA 418
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 419 ADMGNPVGQ--SGLGM 432
>gi|403388971|ref|ZP_10931028.1| hypothetical protein CJC12_14289 [Clostridium sp. JC122]
Length = 280
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYR 161
G+ + +G GV K+ +KA++ F K A G A G +YW + D K++ Y
Sbjct: 2 GQLYANGLGVSKDYEKAVEYFHKAAELGYEEAYEMLGSIYWVGLDNIDRDYKKSRY-WYE 60
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA LG+P A+ + E+A A+ G + AQ+ +A G+GV
Sbjct: 61 KAAALGNPKAKLNLGVIYSKGLSVKKDYEKAFNFYLSAAKDGKMEAQFNVACNFQDGKGV 120
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ N +EA +W+L+AAE G A Y LCY +G+G+ + A + + + G
Sbjct: 121 EKNDKEAVKWFLKAAESGDKDAKYELGLCYKYGKGVEKNLNMATNYFIDSFENG 174
>gi|440493501|gb|ELQ75963.1| Extracellular protein SEL-1 [Trachipleistophora hominis]
Length = 585
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQA 163
G ++ G+G KN+ A + + A G+ A G Y E +K E A +LYR +
Sbjct: 207 GFCYEEGKGTDKNIKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGTEKDEDKAFALYRAS 266
Query: 164 AVLGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ G P AQ A +++ + +A+I G RAQ+ L C H+G G D
Sbjct: 267 ALQGYPWAQSNLAYCFQQGIGVQKDLKKSFEWYERAAIQGLSRAQHNLGHCYHQGMGTDK 326
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
N+ EA WY RAA+ + A ++ CY GEG+P R+A ++ K AA
Sbjct: 327 NVTEAVMWYRRAAKQKNLYAFHSLGNCYQNGEGVPKDEREAVRFYKLAA 375
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 35/257 (13%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
++++ A +LRA +W + L + G + GVR+ ++++ +
Sbjct: 96 IDRLEAQILQNKLRAIGSASVAWLEKAAKLGNSYAQYCLGTCYHDALGVRRCTKRSIEWY 155
Query: 129 LKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAAQPANAEEAVKLLY 184
+ AA+ + A+ G Y E ++K E A LY QAA + DP A
Sbjct: 156 TRSAAQHNPCAIGVLGFCYLEGFGVEKDEYRAFVLYLQAARMNDPVAT------------ 203
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
Y + C G+G D N++ A WY RAAE G A + CY G G
Sbjct: 204 -----------YNMGFCYEEGKGTDKNIKYAFLWYKRAAEMGNPFAQNSLGYCYEEGLGT 252
Query: 245 PLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+A + +A G+ AQ + G+G+ + ++ K+ + E A G + A
Sbjct: 253 EKDEDKAFALYRASALQGYPWAQSNLAYCFQQGIGV--QKDLKKSFEWYERAAIQGLSRA 310
Query: 299 DHVKNVILQQLSATSRD 315
H Q T ++
Sbjct: 311 QHNLGHCYHQGMGTDKN 327
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G G ++N++ A+ + K A+ + A + G +Y+E I +
Sbjct: 426 YEEGYGTKRNINLAIMWYTKSASANNPWAQTNLGTIYFE------GIHV----------- 468
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + E+AV A+ GH RA +L C G V N A +Y +AAE GY RA
Sbjct: 469 --PMDREKAVYYFKLAANQGHSRAYSKLGYCYEEGIVVHKNPSIAFSYYSKAAEQGYNRA 526
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
Y CY G G+ ++ QA + + + G
Sbjct: 527 YYALGKCYERGFGISVNMNQALSYFYKGSFYG 558
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAA-- 164
F+ G GV+K+L K+ + + + A +G + A + G Y + DK A+ YR+AA
Sbjct: 282 FQQGIGVQKDLKKSFEWYERAAIQGLSRAQHNLGHCYHQGMGTDKNVTEAVMWYRRAAKQ 341
Query: 165 -------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
LG+ P + EAV+ A++ V + L+ C G GVD N
Sbjct: 342 KNLYAFHSLGNCYQNGEGVPKDEREAVRFYKLAALKNFVPSLISLSFCYRLGLGVDTNAL 401
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+ + +AAE A + Y G G + A W ++A + AQ G
Sbjct: 402 SSFYYMKKAAELRNAYAQNCLAFFYEEGYGTKRNINLAIMWYTKSASANNPWAQTNLGT- 460
Query: 274 LFTEG-----EMMKAVVYLELATRAGETAA 298
++ EG + KAV Y +LA G + A
Sbjct: 461 IYFEGIHVPMDREKAVYYFKLAANQGHSRA 490
>gi|387125689|ref|YP_006291571.1| hypothetical protein ABTJ_03728 [Acinetobacter baumannii MDR-TJ]
gi|385880181|gb|AFI97276.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
Length = 230
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K++ +A + F K A +G A + G++Y V G
Sbjct: 83 GMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLY-----------------VRG 125
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AQ N E+A + +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 126 EGTAQ--NYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN + Y GEG+P + + A+KW ++AAD G A+
Sbjct: 184 SDAQYNLAQMYLNGEGMPKNLQLAKKWFQQAADAGDSDAK 223
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY+ E
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEK------------------- 94
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ + A + +A+ GH +AQY L + RG G N ++A WY RAAE GY A YN
Sbjct: 95 DMKRAFEYFAKAADKGHAKAQYNLGVLYVRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S QA KW +AA+ H ++ ++ L ++ GE M L+LA +
Sbjct: 155 AHLYKKGHGVAQSDEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGMPKN--LQLAKKW 210
Query: 294 GETAAD 299
+ AAD
Sbjct: 211 FQQAAD 216
>gi|126282500|ref|XP_001373506.1| PREDICTED: protein sel-1 homolog 1-like [Monodelphis domestica]
Length = 881
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 475 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 534
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 535 PVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 594
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 595 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMSAYNSY 654
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+G+ AVV YL LA + E A + ++ Q+
Sbjct: 655 KDGDSNAAVVQYLLLAEQGYEVAQSNAAFILDQK 688
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G V + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 350 GFLYASGLSVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 409
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 410 ANHVASDISLTGGTVVQRIRLPDEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 469
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 470 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 529
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 530 ADMGNPVGQ--SGLGM 543
>gi|116748921|ref|YP_845608.1| Sel1 domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697985|gb|ABK17173.1| Sel1 domain protein repeat-containing protein [Syntrophobacter
fumaroxidans MPOB]
Length = 246
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
R + AL F GAARG+T A MY E + R
Sbjct: 48 RGDYGTALREFRAGAARGNTDAQKMLAAMY------ETGTGVTRDYG------------- 88
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA K A+ +G AQ+ +A + GRG +L EA WY +AAEGG+ A YN +L
Sbjct: 89 EAFKWYSAAARSGDSSAQFMVAQMYYEGRGGPRDLSEAVTWYRKAAEGGFPEAQYNLALF 148
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATR 292
+ G G +A +W ++AA+ G +AQ GL ++ +GE ++A ++L LA
Sbjct: 149 HEIGRGTQRDMNEASRWYRKAAEKGLPQAQARLGL-MYVKGEGVLQDYVQAHMWLNLAAS 207
Query: 293 AGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
GE A + + ++++ +A + W A
Sbjct: 208 NGEEGARNALEALSAKMTSDQVAKAQEMARKWHA 241
>gi|299770689|ref|YP_003732715.1| hypothetical protein AOLE_12275 [Acinetobacter oleivorans DR1]
gi|375134255|ref|YP_004994905.1| hypothetical protein BDGL_000637 [Acinetobacter calcoaceticus
PHEA-2]
gi|298700777|gb|ADI91342.1| hypothetical protein AOLE_12275 [Acinetobacter oleivorans DR1]
gi|325121700|gb|ADY81223.1| hypothetical protein BDGL_000637 [Acinetobacter calcoaceticus
PHEA-2]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKFDQKKALELFEKSAQLGSSNAMLQLGLIYRNGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAA---------QPANAEE----AVKLLYQASIAGHVR 193
E+ KK+ A+ + + A G+P+A + N ++ A +++ G ++
Sbjct: 105 EVVKKDDQKALIWFEEGAKKGNPSAIHNVGLAYYKGLNVKQDRAKAFTYFIRSAELGLIQ 164
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
+Q +A L+ G GV+ +++ + +W L+AAE G + + N L Y G+G+ Q+
Sbjct: 165 SQTVVAAQLYVGDGVEKDIKTSFKWLLKAAEQGDLESQNNVGLAYERGDGVEQDPLQSLV 224
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAG 294
W KRAAD GH AQ L + M + ++ Y E+A R G
Sbjct: 225 WFKRAADHGHALAQYNTALKYYNGAGMKQNLDESIRYAEMAVRNG 269
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLD-KALDSFLKGAARGSTLAMVDAGLMYWE-MDKKE- 154
L + +L+ G +++G V K D KAL F +GA +G+ A+ + GL Y++ ++ K+
Sbjct: 87 LGSSNAMLQLGLIYRNGNEVVKKDDQKALIWFEEGAKKGNPSAIHNVGLAYYKGLNVKQD 146
Query: 155 --AAISLYRQAAVLGDPAAQPANAEE-------------AVKLLYQASIAGHVRAQYQLA 199
A + + ++A LG +Q A + + K L +A+ G + +Q +
Sbjct: 147 RAKAFTYFIRSAELGLIQSQTVVAAQLYVGDGVEKDIKTSFKWLLKAAEQGDLESQNNVG 206
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
L RG GV+ + ++ W+ RAA+ G+ A YNT+L Y G G+ + ++ ++ + A
Sbjct: 207 LAYERGDGVEQDPLQSLVWFKRAADHGHALAQYNTALKYYNGAGMKQNLDESIRYAEMAV 266
Query: 260 DCGH 263
G+
Sbjct: 267 RNGN 270
>gi|386598823|ref|YP_006100329.1| hypothetical protein ECOK1_1122 [Escherichia coli IHE3034]
gi|294491583|gb|ADE90339.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 346
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 83 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 140
Query: 155 AAISLYRQAAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLAL 200
A S Y +AA P AQ ANA V+ YQ A+ AQ+ L +
Sbjct: 141 AK-SWYEKAAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGM 198
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
++G GV N ++A W+ +AA + A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 199 LYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRQAKYWFEKAAE 258
Query: 261 CGHGKAQLEHGLGLFTEGE 279
GH AQ G+ ++ GE
Sbjct: 259 KGHVDAQYNLGV-IYENGE 276
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 141 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 200
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ K E +RQA + AA + AQY L + G+G
Sbjct: 201 Y---KGEGVKQNFRQAREWFEKAASQ----------------NQLNAQYNLGQIYYYGQG 241
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA +AQ
Sbjct: 242 VTQSYRQAKYWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQ 301
Query: 268 LEHGLGLFTE 277
E LG+ E
Sbjct: 302 FE--LGVMNE 309
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 177 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQLNAQYNLGQIY 236
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 237 Y---YGQGVTQSYRQAKYWFEKAAEK----------------GHVDAQYNLGVIYENGEG 277
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 278 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 332
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V AQY L L G +D + Q+A WY +AA+ RA + Y+ G G+ ++
Sbjct: 8 GDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANGLGVNQDYQ 67
Query: 250 QARKWMKRAADCGHGKAQL------EHGLGL 274
Q++ W ++AA AQ + GLG+
Sbjct: 68 QSKLWYEKAAAQNDVDAQFLLGEMYDDGLGV 98
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A E G V A Y L Y +GE L + ++QA+ W ++AAD +AQ + G+ ++ G
Sbjct: 4 AGENGDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGV-MYANG 59
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 29/140 (20%)
Query: 134 RGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
G A GLMY ++D ++A I Y +AA DP
Sbjct: 7 NGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDP------------------- 46
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
RAQ +L + G GV+ + Q++ WY +AA V A + Y G G+ +
Sbjct: 47 ----RAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGEMYDDGLGVSQDY 102
Query: 249 RQARKWMKRAADCGHGKAQL 268
+ A+ W ++AA +AQ+
Sbjct: 103 QHAKMWYEKAAAQNDERAQV 122
>gi|261364815|ref|ZP_05977698.1| Sel1 repeat protein [Neisseria mucosa ATCC 25996]
gi|288566849|gb|EFC88409.1| Sel1 repeat protein [Neisseria mucosa ATCC 25996]
Length = 263
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ GRGVR++ +A+ + K A +G A + G MY++ + A+ YR+A
Sbjct: 84 GVAYERGRGVRQDDAQAVQWYRKAAEQGYATAQFNLGWMYYKGEGVRQDYAQAVQWYRKA 143
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + E+AV+ +A+ GH +AQ L G GV
Sbjct: 144 AEQGVAEAQSNLGVMYERGRGVRQDDEQAVQWYRKAAEQGHAQAQDNLGEAYEEGLGVHQ 203
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ +A +WY +AAE G A YN + Y G G+ QA +W + AA+ GH
Sbjct: 204 DDAQAVQWYRKAAEQGLANAQYNLGVMYERGRGVRQDDEQAVQWYREAAEQGH 256
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 81 LRAASLVCKSWNDALRPLRE-----------AMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
L A L +W D + RE A LL G + +G+GVR++ +A+ +
Sbjct: 12 LIALGLKQAAWADDVPDFRENLQAAERGDAHAQALL--GNMYANGQGVRQDDAEAVRWYR 69
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA 189
+ AA+G A + G+ Y R V D A +AV+ +A+
Sbjct: 70 QAAAQGFAEAQYNLGVAY------------ERGRGVRQDDA-------QAVQWYRKAAEQ 110
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ L ++G GV + +A +WY +AAE G A N + Y G G+
Sbjct: 111 GYATAQFNLGWMYYKGEGVRQDYAQAVQWYRKAAEQGVAEAQSNLGVMYERGRGVRQDDE 170
Query: 250 QARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKN 303
QA +W ++AA+ GH +AQ E GLG+ + +AV + A G A +
Sbjct: 171 QAVQWYRKAAEQGHAQAQDNLGEAYEEGLGVHQDD--AQAVQWYRKAAEQGLANAQYNLG 228
Query: 304 VILQQLSATSRDRAMLV 320
V+ ++ +D V
Sbjct: 229 VMYERGRGVRQDDEQAV 245
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G + G GVR++ +A+ + K A +G A + G+MY E + E A+ YR+
Sbjct: 120 GWMYYKGEGVRQDYAQAVQWYRKAAEQGVAEAQSNLGVMY-ERGRGVRQDDEQAVQWYRK 178
Query: 163 AAVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ E +AV+ +A+ G AQY L + RGRGV
Sbjct: 179 AAEQGHAQAQDNLGEAYEEGLGVHQDDAQAVQWYRKAAEQGLANAQYNLGVMYERGRGVR 238
Query: 210 FNLQEAARWYLRAAEGGYVRAMY 232
+ ++A +WY AAE G++ A++
Sbjct: 239 QDDEQAVQWYREAAEQGHLWALF 261
>gi|388456660|ref|ZP_10138955.1| Sel1 repeat protein [Fluoribacter dumoffii Tex-KL]
Length = 378
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EAM L+ G+ F++G GV KN +A++ + K A + + LA + G MY
Sbjct: 49 EAMYLI--GRMFQYGEGVTKNYTEAINWYQKSADKNNPLAQLSLGFMY------------ 94
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
LG Q N EA K +++ G+ AQ + L G GV N + A W+
Sbjct: 95 -----DLGKGVKQ--NFPEAFKWYMKSAKQGNAIAQRNIGLMYVAGDGVKENKKTAFEWF 147
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++A+ GY +A N + Y GEG QA W ++AAD G +AQ + LGL G+
Sbjct: 148 EKSAKQGYSKAQVNLAYDYIMGEGTSKDVNQALYWYQKAADQGDVRAQ--YSLGLLYTGQ 205
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 30/223 (13%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K++ +A+ +++ + L G + G+GV++N +A ++K A +G+ +A
Sbjct: 64 VTKNYTEAINWYQKSADKNNPLAQLSLGFMYDLGKGVKQNFPEAFKWYMKSAKQGNAIAQ 123
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+ GLMY V GD + N + A + +++ G+ +AQ LA
Sbjct: 124 RNIGLMY-----------------VAGDGVKE--NKKTAFEWFEKSAKQGYSKAQVNLAY 164
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAA 259
G G ++ +A WY +AA+ G VRA Y+ L Y+ + G+ + A W +AA
Sbjct: 165 DYIMGEGTSKDVNQALYWYQKAADQGDVRAQYSLGLLYTGQQPGVAQDDKLAFYWFSQAA 224
Query: 260 DCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+ GH KA+ + G E KA + + A +G++ A
Sbjct: 225 NQGHVKAETYLAYYYLKGYGVEANPEKAAYWYQAAALSGQSEA 267
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
++G A Q + A L +++ G+ A Y + G GV N EA WY ++A+
Sbjct: 21 IVGFAAYQNGDYSTAYPYLMKSAREGNPEAMYLIGRMFQYGEGVTKNYTEAINWYQKSAD 80
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A + Y G+G+ + +A KW ++A G+ AQ GL ++ G+ +K
Sbjct: 81 KNNPLAQLSLGFMYDLGKGVKQNFPEAFKWYMKSAKQGNAIAQRNIGL-MYVAGDGVK 137
>gi|449704723|gb|EMD44910.1| protein kinase, putative [Entamoeba histolytica KU27]
Length = 1038
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+K+G GV+ + + + L+ A GS++AM + G Y+ LG+
Sbjct: 726 YKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVGCWYY-----------------LGENF 768
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N +EAVK Y+++ G +A L C G GV+ N ++A +W+ R+A+ G V
Sbjct: 769 K--VNKKEAVKWYYKSAKEGCGKAMCNLGRCYFDGEGVECNKKKAFKWFKRSAKKGIVSG 826
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+N S CY +G+G + +A W K A+ GH +A + +G
Sbjct: 827 QFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFIIYG 867
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---------- 157
G + G G K ++KAL F + +GS +A + G++ + ++ E +
Sbjct: 612 GVFYSLGYGTSKQINKALQLFNIASGQGSGIAENNKGMILFSGNEYENEVRDCVEAVQCF 671
Query: 158 ----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ + + + +A++ L +++ G+ A+ LA C G G
Sbjct: 672 IRSSEKGCKEGMFNASVCYFNGDGVEKDDYKAIEYLKKSAELGYAEAECLLASCYKYGTG 731
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + + +W L+AA G AM+N Y GE ++ ++A KW ++A G GKA
Sbjct: 732 VKMSNELYVQWTLQAANNGSSIAMFNVGCWYYLGENFKVNKKEAVKWYYKSAKEGCGKAM 791
Query: 268 LEHGLGLFTEGE 279
G F +GE
Sbjct: 792 CNLGRCYF-DGE 802
>gi|67481567|ref|XP_656133.1| protein kinase [Entamoeba histolytica HM-1:IMSS]
gi|56473313|gb|EAL50747.1| protein kinase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1038
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+K+G GV+ + + + L+ A GS++AM + G Y+ LG+
Sbjct: 726 YKYGTGVKMSNELYVQWTLQAANNGSSIAMFNVGCWYY-----------------LGENF 768
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N +EAVK Y+++ G +A L C G GV+ N ++A +W+ R+A+ G V
Sbjct: 769 K--VNKKEAVKWYYKSAKEGCGKAMCNLGRCYFDGEGVECNKKKAFKWFKRSAKKGIVSG 826
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+N S CY +G+G + +A W K A+ GH +A + +G
Sbjct: 827 QFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARAFIIYG 867
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---------- 157
G + G G K ++KAL F + +GS +A + G++ + ++ E +
Sbjct: 612 GVFYSLGYGTSKQINKALQLFNIASGQGSGIAENNKGMILFSGNEYENEVRDCVEAVQCF 671
Query: 158 ----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ + + + +A++ L +++ G+ A+ LA C G G
Sbjct: 672 IRSSEKGCKEGMFNASVCYFNGDGVEKDDYKAIEYLKKSAELGYAEAECLLASCYKYGTG 731
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + + +W L+AA G AM+N Y GE ++ ++A KW ++A G GKA
Sbjct: 732 VKMSNELYVQWTLQAANNGSSIAMFNVGCWYYLGENFKVNKKEAVKWYYKSAKEGCGKAM 791
Query: 268 LEHGLGLFTEGE 279
G F +GE
Sbjct: 792 CNLGRCYF-DGE 802
>gi|312882386|ref|ZP_07742127.1| Sel1 domain-containing protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369786|gb|EFP97297.1| Sel1 domain-containing protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 26/167 (15%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
G G + N+ +L A +G + + G+MY ++ + + Y+QA AA+
Sbjct: 22 EGTGAKTNV------YLDQARQGEPIDQLKLGVMY---ERGDGVVQDYKQAIYWYRKAAE 72
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
NA+ AQ+ L + +GRGVD N EAA+WY +AAE G+V++
Sbjct: 73 QGNAD----------------AQFHLGFMIAKGRGVDKNFIEAAKWYRKAAEQGHVKSQN 116
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-LGLFTEG 278
N + Y GEG+ + Q+ W ++AA+ G+ K+Q + G + LF +G
Sbjct: 117 NLGIMYEEGEGVAQDYTQSVYWYRKAAEQGYAKSQDKLGFMYLFGKG 163
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
GRGV KN +A + K A +G + + G+MY E + ++ YR+AA G
Sbjct: 89 GRGVDKNFIEAAKWYRKAAEQGHVKSQNNLGIMYEEGEGVAQDYTQSVYWYRKAAEQGYA 148
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+Q P +A +A+ G+ Q L G+GV N EAA
Sbjct: 149 KSQDKLGFMYLFGKGVPQFDTQAFYWFRKAAEQGYASGQNNLGYMYALGKGVSKNDTEAA 208
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
WY ++AEGG V N Y G G+P +A W K+ A+ G AQ G+ ++
Sbjct: 209 YWYRKSAEGGDVVGQSNIGHMYYAGLGVPQDDTKAAYWFKKGAEQGGVSAQGNLGV-MYY 267
Query: 277 EGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+G + KA+ + A G+ ++ + V+ ++ +D
Sbjct: 268 QGRSVPQNYAKALYWYRKAAERGDASSQNNIGVLYEEGKGVPQD 311
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G+GV + +A F K A +G + G MY + EAA YR++A GD
Sbjct: 161 GKGVPQFDTQAFYWFRKAAEQGYASGQNNLGYMYALGKGVSKNDTEAAY-WYRKSAEGGD 219
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
Q P + +A + + G V AQ L + ++GR V N +A
Sbjct: 220 VVGQSNIGHMYYAGLGVPQDDTKAAYWFKKGAEQGGVSAQGNLGVMYYQGRSVPQNYAKA 279
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY +AAE G + N + Y G+G+P +QA W ++AA GH AQ
Sbjct: 280 LYWYRKAAERGDASSQNNIGVLYEEGKGVPQDDKQALYWYRKAAAQGHKVAQ 331
>gi|440798272|gb|ELR19340.1| Sel1 repeat/Ubox domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 918
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
W L +A +LR + ++ G GV + KA + + K A RGS +AM G Y
Sbjct: 691 WFKKAMQLNDAGGMLRLAECYEEGEGVGASETKAFELYEKAAMRGSPVAMYRLGQCYEHG 750
Query: 150 ----MDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHV 192
D+K AA ++Y QA+ G AQ N +++ +L QA+ +G V
Sbjct: 751 KGAGKDEKRAA-AVYLQASKAGCAEAQNYLGLCYQFGKLVQRNPDKSFQLFQQATESGFV 809
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
A Y L C H G GV N+ EA Y +AA G A + +CY GE + ++A
Sbjct: 810 DALYNLGRCYHHGEGVAKNMAEAVELYTKAAALGQRSAQWKLGMCYECGEAVEKDIQKAV 869
Query: 253 KWMKRAADCGHGKAQ 267
+AA GH +AQ
Sbjct: 870 HLYIQAAKQGHSRAQ 884
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-EAAI 157
+ A+ L W +++G G K++ KA++ + K + +G +A + Y + K A+
Sbjct: 488 KHALNSLAWA--YQNGEGCEKDIGKAIELYTKASDKGLPVARWNLAWCYHNVVKDLPKAV 545
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
Y +AA G P A + + AV+ +AS A H A LA C
Sbjct: 546 ETYTKAADEGHPGAMWILGRFLETGDIMGRDLKRAVEYYTKASNASHAPATASLASCYFY 605
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+GV+ +L +A +++AAE G +A + CY G+G+ + H
Sbjct: 606 GKGVEKDLNKAIPLFVQAAEQGNKQAEFRLGQCYEEGDGVDVDH 649
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
++A + +AS GH++A +L C G GV + EA R Y+ AA AM + +
Sbjct: 401 QQAFRRWKEASALGHLKATAKLGFCYLNGVGVSKDNGEAIRLYMVAASEDCPAAMNDLAW 460
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGH 263
CY G+G+ A + R+A G+
Sbjct: 461 CYQNGQGIAKDMAAAVALLTRSAKQGN 487
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAI 157
+ + G + GRG +K +A + + +A G A G Y D EA I
Sbjct: 382 AMYKLGSFYFKGRGGQKTPQQAFRRWKEASALGHLKATAKLGFCYLNGVGVSKDNGEA-I 440
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
LY AA PAA + AV LL +++ G+ A LA
Sbjct: 441 RLYMVAASEDCPAAMNDLAWCYQNGQGIAKDMAAAVALLTRSAKQGNKHALNSLAWAYQN 500
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY-SFGEGLPLSHRQARKWMKRAADCGH 263
G G + ++ +A Y +A++ G A +N + CY + + LP +A + +AAD GH
Sbjct: 501 GEGCEKDIGKAIELYTKASDKGLPVARWNLAWCYHNVVKDLP----KAVETYTKAADEGH 556
Query: 264 GKAQLEHGLGLFTE-GEMM-----KAVVYLELATRAGETAA 298
A LG F E G++M +AV Y A+ A A
Sbjct: 557 PGAMWI--LGRFLETGDIMGRDLKRAVEYYTKASNASHAPA 595
>gi|219870295|ref|YP_002474670.1| Sel1 domain protein, repeat-containing protein [Haemophilus
parasuis SH0165]
gi|219690499|gb|ACL31722.1| Sel1 domain protein, repeat-containing protein [Haemophilus
parasuis SH0165]
Length = 251
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
A + + +A +L G +K G GV++N +A F K A +G A + G MY++
Sbjct: 53 AEQGVAQAQAIL--GLMYKEGDGVKQNYHQAFKWFQKAAEQGDKNAQLYLGFMYYD---G 107
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
E Y QAA K +A+ G V AQ L + G+GV +
Sbjct: 108 EGVRQDYHQAA----------------KWFQKAAEQGDVMAQNNLGVMYSDGQGVRQDYH 151
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A +WY +AAE G A +N L Y G+G+ + QA KW ++AA+ G KAQ
Sbjct: 152 QAVKWYQKAAEQGDASAQFNLGLKYQNGQGVSQDYHQALKWFQKAAEQGDPKAQ 205
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
++N A F + A +G A GLMY E GD Q N
Sbjct: 39 QENYQVAFPLFKELAEQGVAQAQAILGLMYKE-----------------GDGVKQ--NYH 79
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A K +A+ G AQ L + G GV + +AA+W+ +AAE G V A N +
Sbjct: 80 QAFKWFQKAAEQGDKNAQLYLGFMYYDGEGVRQDYHQAAKWFQKAAEQGDVMAQNNLGVM 139
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
YS G+G+ + QA KW ++AA+ G AQ GL
Sbjct: 140 YSDGQGVRQDYHQAVKWYQKAAEQGDASAQFNLGL 174
>gi|221068721|ref|ZP_03544826.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713744|gb|EED69112.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 288
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 23/253 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEA 155
+A L G+ + GRGV ++ ++A F AA+G+ L+ + GLMY +
Sbjct: 36 DAQAQLDLGQIYVEGRGVAQSDERAAHWFGLAAAQGNALSQSNLGLMYDRGRGVKQSDQE 95
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR +A G+ Q + +EAVK A+ + AQY L L
Sbjct: 96 AVRWYRLSAAQGEANGQFNLGVMYEDGRGVEQSDQEAVKWYRLAAAQNLLDAQYNLGLMY 155
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV+ + QEAARW+ A G+ N ++ Y+ G G+P ++A + + AA+ G
Sbjct: 156 VSGRGVEQSDQEAARWFGITAARGHDSGQANLAVMYATGRGVPRDEKEAARLLGLAAEQG 215
Query: 263 HGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
+ AQ+ G +F EG + +A + LA G +++ + ++L R
Sbjct: 216 NATAQVNLGT-MFEEGRGVRRSLSQAYFWYALAAAQGLEDTVSLRDAVARKLKPAERAAQ 274
Query: 318 MLVVDSWRAMPSL 330
+ W+ P +
Sbjct: 275 DSRISRWKPKPQI 287
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
QPA+ LL++A AG +AQ L GRGV + + AA W+ AA G +
Sbjct: 24 QPAD------LLHKAQ-AGDAQAQLDLGQIYVEGRGVAQSDERAAHWFGLAAAQGNALSQ 76
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
N L Y G G+ S ++A +W + +A G Q G+ ++ +G
Sbjct: 77 SNLGLMYDRGRGVKQSDQEAVRWYRLSAAQGEANGQFNLGV-MYEDG 122
>gi|384491727|gb|EIE82923.1| hypothetical protein RO3G_07628 [Rhizopus delemar RA 99-880]
Length = 644
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 23/243 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
E + + G ++ G GV KN+++A+ + A +G+ G Y E+D +E
Sbjct: 234 ETVAIYNIGYCYEEGIGVEKNVNEAIRWYRLSAEQGNAFGQNSLGYCYEDGIGVEVDFQE 293
Query: 155 AAISLYRQAAVLGDPAA--------QPANAEEAVKLL-----YQASIAGHVRAQYQLALC 201
A + Y+ +A G P A Q E +L +A++ GH RAQ+ L C
Sbjct: 294 A-VKWYKLSAEQGYPWAECNLGYCYQNGIGVEKDDVLGSYWYKKAALQGHARAQHNLGFC 352
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G G++ N +EA +WY R+AE G + A ++ CY G G+ ++ +++ W +A+
Sbjct: 353 YQNGIGIERNEKEAVKWYRRSAERGNIFAYHSLGYCYQNGIGVDVNEQESFFWYCLSAEE 412
Query: 262 GHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
H AQL G G+ + +AV + + + G A + ++ +D
Sbjct: 413 NHPPAQLSLGYCYRNGIGVAKDESEAVKWFKKSAEHGNALAQNSLGFCYEEGIGLKKDPV 472
Query: 318 MLV 320
+ V
Sbjct: 473 LAV 475
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV+K++ +A+ + A +G T+A+ + G Y E I + +
Sbjct: 206 GYCYGEGLGVKKDVVEAMRWYKLSANQGETVAIYNIGYCY------EEGIGVEK------ 253
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N EA++ ++ G+ Q L C G GV+ + QEA +WY +AE GY
Sbjct: 254 -------NVNEAIRWYRLSAEQGNAFGQNSLGYCYEDGIGVEVDFQEAVKWYKLSAEQGY 306
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A N CY G G+ W K+AA GH +AQ H LG
Sbjct: 307 PWAECNLGYCYQNGIGVEKDDVLGSYWYKKAALQGHARAQ--HNLGF 351
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA--AISLY 160
L G +++G GV K+ +A+ F K A G+ LA G Y E KK+ A+ Y
Sbjct: 419 LSLGYCYRNGIGVAKDESEAVKWFKKSAEHGNALAQNSLGFCYEEGIGLKKDPVLAVYWY 478
Query: 161 RQAAVLGDPAAQP------ANA-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++A +P AQ AN ++AVK +A+ H RA +L + L G G
Sbjct: 479 HKSAQQNNPWAQCNLGYCYANGMGVQKDDKKAVKWYRRAAEQNHSRALDKLGIHLQNGLG 538
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V+ NL+EA + +AAE G+V A Y+ C+ G G + R+A W +RAA G
Sbjct: 539 VERNLEEAFEMFKKAAEQGHVSAQYHLGSCFEKGLGCTIDLRKAIDWFERAALAG 593
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +++G G+ +N +A+ + + A RG+ A G Y +++++E+ Y
Sbjct: 350 GFCYQNGIGIERNEKEAVKWYRRSAERGNIFAYHSLGYCYQNGIGVDVNEQESFF-WYCL 408
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A P AQ + + EAVK +++ G+ AQ L C G G+
Sbjct: 409 SAEENHPPAQLSLGYCYRNGIGVAKDESEAVKWFKKSAEHGNALAQNSLGFCYEEGIGLK 468
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--- 266
+ A WY ++A+ A N CY+ G G+ ++A KW +RAA+ H +A
Sbjct: 469 KDPVLAVYWYHKSAQQNNPWAQCNLGYCYANGMGVQKDDKKAVKWYRRAAEQNHSRALDK 528
Query: 267 ---QLEHGLGLFTEGEMMKAVVYLELATRAGETAAD-HVKNVILQQLSAT 312
L++GLG+ E + +A + A G +A H+ + + L T
Sbjct: 529 LGIHLQNGLGV--ERNLEEAFEMFKKAAEQGHVSAQYHLGSCFEKGLGCT 576
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 184 YQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
Y+AS GH R Q L C G GV ++ EA RWY +A G A+YN CY G
Sbjct: 190 YKASAEQGHARGQSILGYCYGEGLGVKKDVVEAMRWYKLSANQGETVAIYNIGYCYEEGI 249
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
G+ + +A +W + +A+ G+ Q G G+ E + +AV + +L+ G A
Sbjct: 250 GVEKNVNEAIRWYRLSAEQGNAFGQNSLGYCYEDGIGVEVDFQEAVKWYKLSAEQGYPWA 309
Query: 299 DHVKNVILQQLSATSRDRAM 318
+ Q +D +
Sbjct: 310 ECNLGYCYQNGIGVEKDDVL 329
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A++ H AQY L +C H G + + ++A RWY +AE G+ R CY G G+
Sbjct: 157 ATLHQHPAAQYALGVCYHDGIALQRDEKQAFRWYKASAEQGHARGQSILGYCYGEGLGVK 216
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
+A +W K +A+ G A G G+ E + +A+ + L+ G
Sbjct: 217 KDVVEAMRWYKLSANQGETVAIYNIGYCYEEGIGVEKNVNEAIRWYRLSAEQG 269
>gi|386638523|ref|YP_006105321.1| hypothetical protein ECABU_c12240 [Escherichia coli ABU 83972]
gi|442603690|ref|ZP_21018559.1| FIG00639943: hypothetical protein [Escherichia coli Nissle 1917]
gi|307553015|gb|ADN45790.1| conserved hypothetical protein [Escherichia coli ABU 83972]
gi|441715593|emb|CCQ04536.1| FIG00639943: hypothetical protein [Escherichia coli Nissle 1917]
Length = 328
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 65 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 122
Query: 155 AAISLYRQAAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLAL 200
A S Y +AA P AQ ANA V+ YQ A+ AQ+ L +
Sbjct: 123 AK-SWYEKAAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGM 180
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
++G GV N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 181 LYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAE 240
Query: 261 CGHGKAQLEHGLGLFTEGE 279
GH AQ G+ ++ GE
Sbjct: 241 KGHVDAQYNLGV-IYENGE 258
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 123 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 182
Query: 148 WEMDKKEAAISLYRQAAVLGDPAA---QPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
+ K E +RQA + AA QP AQY L +
Sbjct: 183 Y---KGEGVKQNFRQAREWFEKAASQNQP-------------------NAQYNLGQIYYY 220
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G+GV + ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA
Sbjct: 221 GQGVTQSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDA 280
Query: 265 KAQLEHGLGLFTE 277
+AQ E LG+ E
Sbjct: 281 QAQFE--LGVMNE 291
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 159 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIY 218
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 219 Y---YGQGVTQSYRQAKDWFEKAAEK----------------GHVDAQYNLGVIYENGEG 259
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 260 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 314
>gi|386815241|ref|ZP_10102459.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
gi|386419817|gb|EIJ33652.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
Length = 464
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 31/234 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G R+ G+ KNL +A F K A +G A + LMY D E AI Y
Sbjct: 213 GVRYLQGKAQNKNLTQAAYWFRKAAQQGDPAAAFNLALMY---DNGEGVGKNLPEAIRWY 269
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
RQAA G+ AQ P + E+ + + +A+ G+ AQY LA L +G+
Sbjct: 270 RQAAQQGENGAQYNLGVKYLLGESLPQDHEKGINWIRKAAEGGNPAAQYTLAYMLDQGKD 329
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + +A WY ++A GY A ++ ++ G+G+ +A +W ++AAD G+ AQ
Sbjct: 330 LPKDDTQALYWYRQSAAQGYTNAQTGLAIMFANGQGVQADPEEAIRWFQKAADAGNAAAQ 389
Query: 268 LE------HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
HG+G T ++ A +L A G A ++ +L+QLS + D
Sbjct: 390 FNLGTCMAHGVG--TAKDLPSAAYWLSRAAAQGHEHAADNRDYVLKQLSDSEHD 441
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM------------YW-EMDKKEAAI 157
++ G V+++ KA + + A +G + + G++ YW E ++ +
Sbjct: 111 YETGSYVKQDNTKAASLYERAAKQGHVDSQYNLGVLSLQAFHDVEKARYWLEQAAQQQDV 170
Query: 158 SLYRQAAVLGDPAAQP-ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
A+L D + P A++EEA +A+ GH AQ+ L + +G+ + NL +AA
Sbjct: 171 EAQYNLALLYDFSIDPQADSEEAAYWYTRAAQNGHSDAQFDLGVRYLQGKAQNKNLTQAA 230
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----L 272
W+ +AA+ G A +N +L Y GEG+ + +A +W ++AA G AQ G L
Sbjct: 231 YWFRKAAQQGDPAAAFNLALMYDNGEGVGKNLPEAIRWYRQAAQQGENGAQYNLGVKYLL 290
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G + K + ++ A G AA + +L Q +D
Sbjct: 291 GESLPQDHEKGINWIRKAAEGGNPAAQYTLAYMLDQGKDLPKD 333
>gi|169349791|ref|ZP_02866729.1| hypothetical protein CLOSPI_00529 [Clostridium spiroforme DSM 1552]
gi|169293359|gb|EDS75492.1| Sel1 repeat protein [Clostridium spiroforme DSM 1552]
Length = 743
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
++ G GV ++ KA + +LKGA G A+ + G Y EA A+ Y +AA L
Sbjct: 204 YEMGIGVEQDYQKAYELYLKGAKAGFPRAICNLGYCYEYGYGVEADIYQAVEYYIEAAKL 263
Query: 167 GDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G A + N E A K +A+ GH R+QY+LA C G G +
Sbjct: 264 GYSEAIYSLGTCFEFGEGIEQNDERAFKCYEEAANQGHERSQYRLANCYENGIGTPKDFI 323
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +A+ Y A+ + + CY G+G+ +QARK+ ++AA G+ + Q G
Sbjct: 324 KAFYWYKQASIKEYPPALISLATCYELGQGIEKDLKQARKYYQKAAHLGYARGQF--WFG 381
Query: 274 LFTE 277
F E
Sbjct: 382 YFYE 385
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 26/242 (10%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A+ C W + L+ G ++ G GV+KNL KA+D +L+ A
Sbjct: 388 PEIKNAAYRCTYWYRQASKQNDVQALVALGYCYESGFGVKKNLKKAVDLYLQAAKMNYAP 447
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQL 198
+ Y E I + + +A+ + AS A + RA L
Sbjct: 448 GQCNLAYCY------EIGIGV-------------EVDLNKAIYYYHLASKANYPRAMCNL 488
Query: 199 ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
G+GV+ + Q+A YL+AA+ Y +Y T L Y G + + +A ++ ++A
Sbjct: 489 GYLYTHGQGVEVDHQKAFDLYLQAAKMNYAPGLYYTGLAYEEGNAVNVDIDKAIEYYQKA 548
Query: 259 ADCGHGKAQLEHGLGLFTEGEM-----MKAVVYLELATRAGETAADHVKNVILQQLSATS 313
D + A + LGL E + +KA+ Y + A + A + + L +
Sbjct: 549 TDLNYSAAM--YNLGLIYENNIDYHDDLKAIEYYQAAIEYNDARAMYRMALYLDEGQVIK 606
Query: 314 RD 315
RD
Sbjct: 607 RD 608
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 30/253 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-DKKEAAISL--- 159
L+ ++ G+G+ K+L +A + K A G G Y + K AA
Sbjct: 341 LISLATCYELGQGIEKDLKQARKYYQKAAHLGYARGQFWFGYFYENHPEIKNAAYRCTYW 400
Query: 160 YRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
YRQA+ D A A N ++AV L QA+ + Q LA C G
Sbjct: 401 YRQASKQNDVQALVALGYCYESGFGVKKNLKKAVDLYLQAAKMNYAPGQCNLAYCYEIGI 460
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV+ +L +A +Y A++ Y RAM N Y+ G+G+ + H++A +AA +
Sbjct: 461 GVEVDLNKAIYYYHLASKANYPRAMCNLGYLYTHGQGVEVDHQKAFDLYLQAAKMNYAPG 520
Query: 267 QLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQ-------LSATSR 314
GL + EG ++ KA+ Y + AT +AA + +I + L A
Sbjct: 521 LYYTGLA-YEEGNAVNVDIDKAIEYYQKATDLNYSAAMYNLGLIYENNIDYHDDLKAIEY 579
Query: 315 DRAMLVVDSWRAM 327
+A + + RAM
Sbjct: 580 YQAAIEYNDARAM 592
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----------MDKK 153
L G ++ G V ++DKA++ + K + AM + GL+Y ++
Sbjct: 521 LYYTGLAYEEGNAVNVDIDKAIEYYQKATDLNYSAAMYNLGLIYENNIDYHDDLKAIEYY 580
Query: 154 EAAI------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+AAI ++YR A L + + ++A + ++ + A + L G
Sbjct: 581 QAAIEYNDARAMYRMALYLDEGQVIKRDLQKAFDYIQSSANQAYSPALNMYGIYLENGLA 640
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ +++EA R +L+AA GY A+YN CY +G G+ + A + +A+D + +A
Sbjct: 641 GNKDMEEAYRCFLKAARAGYAPAVYNLGRCYFYGIGIEIDKELAFELFCKASDSNYREAS 700
Query: 268 LEHG 271
G
Sbjct: 701 FMAG 704
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
R D+AL F KG G++ + G +Y E + + Q+ ++ Q
Sbjct: 139 RHEYDEALIYFKKGEEIGNSDCICVIGYLY------ERGLGV-EQSDIMAAHYYQ----- 186
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A+ +V A LA G GV+ + Q+A YL+ A+ G+ RA+ N C
Sbjct: 187 -------KATDLKNVVASCNLAYFYEMGIGVEQDYQKAYELYLKGAKAGFPRAICNLGYC 239
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG 278
Y +G G+ QA ++ AA G+ +A G F EG
Sbjct: 240 YEYGYGVEADIYQAVEYYIEAAKLGYSEAIYSLGTCFEFGEG 281
>gi|171914139|ref|ZP_02929609.1| Sel1 domain protein repeat-containing protein [Verrucomicrobium
spinosum DSM 4136]
Length = 381
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R+ G G+ K+ KA + + A + AM G M E D+K+A Y +
Sbjct: 57 GIRYLGGEGMPKDEKKAAEWLTRAAEKEKLEAMNALGTMNEEGVGFPKDEKKA-FEWYEK 115
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ N EA K L +A+ +Q A L RG G+D
Sbjct: 116 AAKYGLALAQQNLSQCYELGKGVEKNQAEANKWLKRAADQDFAPSQAMYAFKLERGLGID 175
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
N +EAA WYL+AA+ G +RAM + + Y G G+PL +R+A W +RAA
Sbjct: 176 KNTREAAEWYLKAAQNGLIRAMTHLAYLYYTGTGVPLDYRRAEAWYRRAA 225
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + ++A + L +A+ + A L G G + ++A WY +AA+ G A
Sbjct: 67 PKDEKKAAEWLTRAAEKEKLEAMNALGTMNEEGVGFPKDEKKAFEWYEKAAKYGLALAQQ 126
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
N S CY G+G+ + +A KW+KRAAD +Q LE GLG+
Sbjct: 127 NLSQCYELGKGVEKNQAEANKWLKRAADQDFAPSQAMYAFKLERGLGI 174
>gi|260654117|ref|ZP_05859607.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
gi|260631102|gb|EEX49296.1| TPR repeat protein [Jonquetella anthropi E3_33 E1]
Length = 264
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV +L KA+ + K A G +A + +MY D E
Sbjct: 59 YHTGNGVPVDLAKAVKWYTKAAQAGDEVAQNNLAVMY---DTGEGV-------------- 101
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + +A + +A+ AG+ AQ+ LAL + R + +A WY +AAE G A
Sbjct: 102 --PIDKTKAFEWYTKAAQAGYAPAQHNLALMHYSSRSSAADQAKAIEWYTKAAEAGETEA 159
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
YN +L Y GEG+P +A +W +AA+ GH AQL L G+ E + ++A +
Sbjct: 160 QYNLALTYVSGEGVPQDVVKAAEWFTKAAESGHADAQLNLALLNWNGVGVERDKVRAYYW 219
Query: 287 LELATRAGETAADHVKNVILQQLSATSR 314
A AG A +++ I+ L ++
Sbjct: 220 ACRADLAGADKAVGLRSEIVGSLDKETK 247
>gi|255264741|ref|ZP_05344083.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
gi|255107076|gb|EET49750.1| Sel1 domain protein repeat-containing protein [Thalassiobium sp.
R2A62]
Length = 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK 152
RPL E A R G + +G GV + +A+ + K A +G A + G+MY E K
Sbjct: 49 RPLAEQGDAAAQFRLGVMYGNGLGVPQEDAEAVSWYRKAAEQGHARAQTNLGVMY-ENGK 107
Query: 153 K-----EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRA 194
A+S YR AA GD AQ P + EAV +A+ GH +A
Sbjct: 108 GVTRDYTEALSWYRTAAGQGDARAQTNLGVMYRNGKGVPQDYAEAVSWYRKAAEQGHAKA 167
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
QY L + +GV + EA WY +AAE G A + Y G+G+ + +A W
Sbjct: 168 QYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVLQDYTEAAIW 227
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGE 279
++AA+ G AQ G+ ++ G+
Sbjct: 228 YRKAAEQGGALAQNNLGV-MYDNGQ 251
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + +R + G+ P EAV +A+ GH RAQ L + G+GV + EA
Sbjct: 57 AAAQFRLGVMYGNGLGVPQEDAEAVSWYRKAAEQGHARAQTNLGVMYENGKGVTRDYTEA 116
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
WY AA G RA N + Y G+G+P + +A W ++AA+ GH KAQ G +
Sbjct: 117 LSWYRTAAGQGDARAQTNLGVMYRNGKGVPQDYAEAVSWYRKAAEQGHAKAQYNLGFMYY 176
Query: 276 T-EG---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
T +G + +AV + A G A V+ + +D
Sbjct: 177 TAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVLQD 220
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++G+GV ++ +AL + A +G A + G+MY D E A+S YR+
Sbjct: 100 GVMYENGKGVTRDYTEALSWYRTAAGQGDARAQTNLGVMYRNGKGVPQDYAE-AVSWYRK 158
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ P + EAV +A+ G AQ L + G+GV
Sbjct: 159 AAEQGHAKAQYNLGFMYYTAQGVPQDYTEAVSWYRKAAEQGSAGAQTTLGVMYENGQGVL 218
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+ EAA WY +AAE G A N + Y G+G+P + A W ++ G+ K
Sbjct: 219 QDYTEAAIWYRKAAEQGGALAQNNLGVMYDNGQGVPQDYVLAHMWFNISSANGYEK 274
>gi|26247143|ref|NP_753183.1| hypothetical protein c1269 [Escherichia coli CFT073]
gi|227888009|ref|ZP_04005814.1| Sel1 family repeat-containing serine/threonine protein kinase
[Escherichia coli 83972]
gi|300982506|ref|ZP_07176160.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
gi|386628648|ref|YP_006148368.1| hypothetical protein i02_1162 [Escherichia coli str. 'clone D i2']
gi|386633568|ref|YP_006153287.1| hypothetical protein i14_1162 [Escherichia coli str. 'clone D i14']
gi|419915803|ref|ZP_14434149.1| hypothetical protein ECKD1_21452 [Escherichia coli KD1]
gi|432380724|ref|ZP_19623674.1| hypothetical protein WCU_00866 [Escherichia coli KTE15]
gi|432411103|ref|ZP_19653782.1| hypothetical protein WG9_01588 [Escherichia coli KTE39]
gi|432431147|ref|ZP_19673588.1| hypothetical protein A13K_01437 [Escherichia coli KTE187]
gi|432435678|ref|ZP_19678073.1| hypothetical protein A13M_01384 [Escherichia coli KTE188]
gi|432440478|ref|ZP_19682827.1| hypothetical protein A13O_01303 [Escherichia coli KTE189]
gi|432445592|ref|ZP_19687896.1| hypothetical protein A13S_01628 [Escherichia coli KTE191]
gi|432455974|ref|ZP_19698170.1| hypothetical protein A15C_01763 [Escherichia coli KTE201]
gi|432494902|ref|ZP_19736718.1| hypothetical protein A173_02070 [Escherichia coli KTE214]
gi|432503743|ref|ZP_19745477.1| hypothetical protein A17E_00797 [Escherichia coli KTE220]
gi|432526741|ref|ZP_19763843.1| hypothetical protein A17Y_04881 [Escherichia coli KTE230]
gi|432567826|ref|ZP_19804349.1| hypothetical protein A1SE_01403 [Escherichia coli KTE53]
gi|432592153|ref|ZP_19828480.1| hypothetical protein A1SS_01577 [Escherichia coli KTE60]
gi|432606864|ref|ZP_19843055.1| hypothetical protein A1U7_01861 [Escherichia coli KTE67]
gi|432610779|ref|ZP_19846947.1| hypothetical protein A1UG_01133 [Escherichia coli KTE72]
gi|432645537|ref|ZP_19881335.1| hypothetical protein A1W5_01286 [Escherichia coli KTE86]
gi|432654635|ref|ZP_19890352.1| hypothetical protein A1WE_00742 [Escherichia coli KTE93]
gi|432843551|ref|ZP_20076734.1| hypothetical protein A1YS_01468 [Escherichia coli KTE141]
gi|432936923|ref|ZP_20135615.1| hypothetical protein A13C_00030 [Escherichia coli KTE183]
gi|432999249|ref|ZP_20187786.1| hypothetical protein A17K_01587 [Escherichia coli KTE223]
gi|433014192|ref|ZP_20202549.1| hypothetical protein WI5_02023 [Escherichia coli KTE104]
gi|433026251|ref|ZP_20214206.1| hypothetical protein WI9_04421 [Escherichia coli KTE106]
gi|433058438|ref|ZP_20245495.1| hypothetical protein WIM_02214 [Escherichia coli KTE124]
gi|433127978|ref|ZP_20313504.1| hypothetical protein WKE_04481 [Escherichia coli KTE160]
gi|433139626|ref|ZP_20324894.1| hypothetical protein WKM_01913 [Escherichia coli KTE167]
gi|433148496|ref|ZP_20333550.1| hypothetical protein WKQ_01160 [Escherichia coli KTE174]
gi|433191172|ref|ZP_20375242.1| hypothetical protein WGS_04268 [Escherichia coli KTE88]
gi|433201237|ref|ZP_20385085.1| hypothetical protein WGW_04769 [Escherichia coli KTE94]
gi|433210544|ref|ZP_20394194.1| hypothetical protein WI1_04331 [Escherichia coli KTE97]
gi|433212868|ref|ZP_20396468.1| hypothetical protein WI3_02054 [Escherichia coli KTE99]
gi|433327623|ref|ZP_20403903.1| hypothetical protein B185_024045 [Escherichia coli J96]
gi|26107544|gb|AAN79743.1|AE016759_17 Hypothetical protein c1269 [Escherichia coli CFT073]
gi|47600612|emb|CAE55733.1| hypothetical protein [Escherichia coli Nissle 1917]
gi|227835005|gb|EEJ45471.1| Sel1 family repeat-containing serine/threonine protein kinase
[Escherichia coli 83972]
gi|300408738|gb|EFJ92276.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
gi|355419547|gb|AER83744.1| hypothetical protein i02_1162 [Escherichia coli str. 'clone D i2']
gi|355424467|gb|AER88663.1| hypothetical protein i14_1162 [Escherichia coli str. 'clone D i14']
gi|388383034|gb|EIL44845.1| hypothetical protein ECKD1_21452 [Escherichia coli KD1]
gi|430910211|gb|ELC31565.1| hypothetical protein WCU_00866 [Escherichia coli KTE15]
gi|430937025|gb|ELC57288.1| hypothetical protein WG9_01588 [Escherichia coli KTE39]
gi|430954942|gb|ELC73735.1| hypothetical protein A13K_01437 [Escherichia coli KTE187]
gi|430965352|gb|ELC82777.1| hypothetical protein A13M_01384 [Escherichia coli KTE188]
gi|430968543|gb|ELC85769.1| hypothetical protein A13O_01303 [Escherichia coli KTE189]
gi|430974828|gb|ELC91742.1| hypothetical protein A13S_01628 [Escherichia coli KTE191]
gi|430984203|gb|ELD00844.1| hypothetical protein A15C_01763 [Escherichia coli KTE201]
gi|431027507|gb|ELD40570.1| hypothetical protein A173_02070 [Escherichia coli KTE214]
gi|431041058|gb|ELD51590.1| hypothetical protein A17E_00797 [Escherichia coli KTE220]
gi|431046255|gb|ELD56373.1| hypothetical protein A17Y_04881 [Escherichia coli KTE230]
gi|431102351|gb|ELE07175.1| hypothetical protein A1SE_01403 [Escherichia coli KTE53]
gi|431132069|gb|ELE34085.1| hypothetical protein A1SS_01577 [Escherichia coli KTE60]
gi|431139210|gb|ELE41006.1| hypothetical protein A1U7_01861 [Escherichia coli KTE67]
gi|431150324|gb|ELE51379.1| hypothetical protein A1UG_01133 [Escherichia coli KTE72]
gi|431182255|gb|ELE82076.1| hypothetical protein A1W5_01286 [Escherichia coli KTE86]
gi|431195176|gb|ELE94384.1| hypothetical protein A1WE_00742 [Escherichia coli KTE93]
gi|431396431|gb|ELG79909.1| hypothetical protein A1YS_01468 [Escherichia coli KTE141]
gi|431465878|gb|ELH45958.1| hypothetical protein A13C_00030 [Escherichia coli KTE183]
gi|431513018|gb|ELH91105.1| hypothetical protein A17K_01587 [Escherichia coli KTE223]
gi|431528041|gb|ELI04753.1| hypothetical protein WI9_04421 [Escherichia coli KTE106]
gi|431531485|gb|ELI08148.1| hypothetical protein WI5_02023 [Escherichia coli KTE104]
gi|431570354|gb|ELI43269.1| hypothetical protein WIM_02214 [Escherichia coli KTE124]
gi|431638271|gb|ELJ06311.1| hypothetical protein WKE_04481 [Escherichia coli KTE160]
gi|431660843|gb|ELJ27702.1| hypothetical protein WKM_01913 [Escherichia coli KTE167]
gi|431674795|gb|ELJ40946.1| hypothetical protein WKQ_01160 [Escherichia coli KTE174]
gi|431699777|gb|ELJ64772.1| hypothetical protein WGS_04268 [Escherichia coli KTE88]
gi|431713658|gb|ELJ77882.1| hypothetical protein WGW_04769 [Escherichia coli KTE94]
gi|431726866|gb|ELJ90633.1| hypothetical protein WI1_04331 [Escherichia coli KTE97]
gi|431734656|gb|ELJ98035.1| hypothetical protein WI3_02054 [Escherichia coli KTE99]
gi|432344820|gb|ELL39374.1| hypothetical protein B185_024045 [Escherichia coli J96]
Length = 378
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A LL G+ + G GV ++ A + K AA+ A V+ ++Y E D ++
Sbjct: 115 DAQFLL--GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQ 172
Query: 155 AAISLYRQAAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLAL 200
A S Y +AA P AQ ANA V+ YQ A+ AQ+ L +
Sbjct: 173 AK-SWYEKAAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGM 230
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
++G GV N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA+
Sbjct: 231 LYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAE 290
Query: 261 CGHGKAQLEHGLGLFTEGE 279
GH AQ G+ ++ GE
Sbjct: 291 KGHVDAQYNLGV-IYENGE 308
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQAAVLGDPAA---QPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
+ K E +RQA + AA QP AQY L +
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQNQP-------------------NAQYNLGQIYYY 270
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G+GV + ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA
Sbjct: 271 GQGVTQSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDA 330
Query: 265 KAQLEHGLGLFTE 277
+AQ E LG+ E
Sbjct: 331 QAQFE--LGVMNE 341
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 209 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRQAKDWFEKAAEK----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 310 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 364
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V AQY L L G +D + Q+A WY +AA+ RA + Y+ G G+ ++
Sbjct: 40 GDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANGLGVNQDYQ 99
Query: 250 QARKWMKRAADCGHGKAQL------EHGLGL 274
Q++ W ++AA AQ + GLG+
Sbjct: 100 QSKLWYEKAAAQNDVDAQFLLGEMYDDGLGV 130
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 29/152 (19%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQPANA 176
D L G A GLMY ++D ++A I Y +AA DP
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAADQNDP------- 78
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
RAQ +L + G GV+ + Q++ WY +AA V A +
Sbjct: 79 ----------------RAQAKLGVMYANGLGVNQDYQQSKLWYEKAAAQNDVDAQFLLGE 122
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
Y G G+ ++ A+ W ++AA +AQ+
Sbjct: 123 MYDDGLGVSQDYQHAKMWYEKAAAQNDERAQV 154
>gi|424845480|ref|ZP_18270091.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363986918|gb|EHM13748.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 264
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A K +++ G+ AQ+ LA H G GV +L +A +WY +AA+ G A N ++
Sbjct: 35 QAAKWFTKSAEGGYTNAQFSLARMYHTGNGVPVDLAKAVKWYTKAAQAGDEVAQNNLAVM 94
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF------TEGEMMKAVVYLELAT 291
Y GEG+P+ +A +W +AA G+ AQ H L L + + KA+ + A
Sbjct: 95 YDTGEGVPIDKTKAFEWYTKAAQAGYAPAQ--HNLALMHYSSRSSAADQAKAIEWCTKAA 152
Query: 292 RAGETAADHVKNVILQQLSATSRDRAMLVVDSW--RAMPSLH 331
AGET A + N+ L +S + ++ W +A S H
Sbjct: 153 EAGETEAQY--NLALTYVSGEGVPQDVVKAAEWFTKAAESGH 192
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV +L KA+ + K A G +A + +MY D E
Sbjct: 59 YHTGNGVPVDLAKAVKWYTKAAQAGDEVAQNNLAVMY---DTGEGV-------------- 101
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + +A + +A+ AG+ AQ+ LAL + R + +A W +AAE G A
Sbjct: 102 --PIDKTKAFEWYTKAAQAGYAPAQHNLALMHYSSRSSAADQAKAIEWCTKAAEAGETEA 159
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
YN +L Y GEG+P +A +W +AA+ GH AQL L G+ E + ++A +
Sbjct: 160 QYNLALTYVSGEGVPQDVVKAAEWFTKAAESGHADAQLNLALLNWNGVGVERDKVRAYYW 219
Query: 287 LELATRAGETAADHVKNVILQQLSATSR 314
A AG A +++ I+ L ++
Sbjct: 220 ACRADLAGADKAVGLRSEIVGSLDKETK 247
>gi|290983676|ref|XP_002674554.1| predicted protein [Naegleria gruberi]
gi|284088145|gb|EFC41810.1| predicted protein [Naegleria gruberi]
Length = 889
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HG V KN ++ + A +G A +Y+ ++ + Y +AA G
Sbjct: 673 GLMYYHGEYVSKNKEREFYWIYRAAEQGHVKAESSIACLYYAQEEYSKSFEWYLKAAEKG 732
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
D +Q P + A +A+ GH +AQ + + G+G+ N +
Sbjct: 733 DSDSQFEIGSLYHKGLGIPKDFTNAFSWYSKAAEHGHSKAQNNIGVLYQTGQGIPQNYSK 792
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------ 268
A W++++AE AM L Y G+G+P + A +W +AA+CG+ ++Q+
Sbjct: 793 ALEWFMKSAENNDTDAMNFIGLIYQEGQGVPQDNITAFEWFLKAAECGNVQSQILVATMY 852
Query: 269 EHGLGL 274
HG+G+
Sbjct: 853 HHGIGV 858
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+G+ +N KAL+ F+K A T AM GL+Y E
Sbjct: 777 GVLYQTGQGIPQNYSKALEWFMKSAENNDTDAMNFIGLIYQE------------------ 818
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
P + A + +A+ G+V++Q +A H G GV+ NL +A +WY +AA G
Sbjct: 819 -GQGVPQDNITAFEWFLKAAECGNVQSQILVATMYHHGIGVEQNLYDALKWYEKAAGG 875
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N A+K A+ + A++ L + H+G+ V+ + +A W+ ++AE GY A ++
Sbjct: 613 NINGALKYFQLAAEKDNASAEHFLGIMYHKGQVVEQDFCKAFEWFGKSAEKGYPEAQFSI 672
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L Y GE + + + W+ RAA+ GH KA+
Sbjct: 673 GLMYYHGEYVSKNKEREFYWIYRAAEQGHVKAE 705
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVLGDPAAQ------ 172
K+ + +LK A +G + + + G +Y + + K A S Y +AA G AQ
Sbjct: 720 KSFEWYLKAAEKGDSDSQFEIGSLYHKGLGIPKDFTNAFSWYSKAAEHGHSKAQNNIGVL 779
Query: 173 -------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
P N +A++ +++ A + L G+GV + A W+L+AAE
Sbjct: 780 YQTGQGIPQNYSKALEWFMKSAENNDTDAMNFIGLIYQEGQGVPQDNITAFEWFLKAAEC 839
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
G V++ + Y G G+ + A KW ++AA
Sbjct: 840 GNVQSQILVATMYHHGIGVEQNLYDALKWYEKAA 873
>gi|290989411|ref|XP_002677331.1| predicted protein [Naegleria gruberi]
gi|284090938|gb|EFC44587.1| predicted protein [Naegleria gruberi]
Length = 227
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + +G+G +++ +KAL + K A +G A GLMY+ + K+ E A +
Sbjct: 7 GLMYYNGQGCQQSFEKALKWYEKSANQGHNEAQFRLGLMYY-LGKRCRQSFEKAFEWVEK 65
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G AQ + E+A + +++ GH +A Y+L L + G+G
Sbjct: 66 SANQGYDEAQFKLAWMYFNGEGCEKSCEKAFEWYEKSANQGHTKAPYRLGLMYYLGKGCK 125
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY ++A A +N L Y GEG S +A KW K+AA+ H AQ
Sbjct: 126 QSFEKAFEWYEKSANQENAVAKFNLGLMYYNGEGCQQSFEKALKWYKKAANQEHANAQFN 185
Query: 270 HGLGLFT----EGEMMKAVVYLELATRAGETAADHV 301
GL + E KA + E A A HV
Sbjct: 186 LGLMYYNGKGCEKSFEKAFEWYEKAANQEHVNAQHV 221
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 24/213 (11%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ +GH+ A ++ + +A V KS A + EA L W + +G
Sbjct: 31 ANQGHNEAQFRLGLMYYLGKRCRQSFEKAFEWVEKS---ANQGYDEAQFKLAW--MYFNG 85
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
G K+ +KA + + K A +G T A GLMY+ LG Q
Sbjct: 86 EGCEKSCEKAFEWYEKSANQGHTKAPYRLGLMYY-----------------LGKGCKQSF 128
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
E+A + +++ + A++ L L + G G + ++A +WY +AA + A +N
Sbjct: 129 --EKAFEWYEKSANQENAVAKFNLGLMYYNGEGCQQSFEKALKWYKKAANQEHANAQFNL 186
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L Y G+G S +A +W ++AA+ H AQ
Sbjct: 187 GLMYYNGKGCEKSFEKAFEWYEKAANQEHVNAQ 219
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ+ L L + G+G + ++A +WY ++A G+ A + L Y G+ S +A
Sbjct: 1 NAQFYLGLMYYNGQGCQQSFEKALKWYEKSANQGHNEAQFRLGLMYYLGKRCRQSFEKAF 60
Query: 253 KWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADH 300
+W++++A+ G+ +AQ + F E KA + E + G T A +
Sbjct: 61 EWVEKSANQGYDEAQFKLAWMYFNGEGCEKSCEKAFEWYEKSANQGHTKAPY 112
>gi|424737685|ref|ZP_18166135.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZB2]
gi|422948324|gb|EKU42707.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZB2]
Length = 638
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G+ +N ++A + A +G+T A + G +Y
Sbjct: 257 GVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLY-------------------H 297
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N ++AV A++ G AQY L +GRG+ N +EAA+W+ AA +
Sbjct: 298 NGTGVEQNYDKAVAYFKMAALTGDASAQYNLGYMHLKGRGIPQNQEEAAKWFHMAALQDH 357
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
V A + ++ Y+ G+G+ H +A KW K AA GH AQ GL E ++ A +L
Sbjct: 358 VNAEFQLAMLYNTGQGMTKDHIEALKWFKLAAHKGHLNAQYCLGLLYEKEQNLVSAEKWL 417
Query: 288 ELATRAGETAA 298
LA G +A
Sbjct: 418 LLAADNGHISA 428
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEAAISLYRQAAVLGDPAAQ---- 172
+NL A L A G A + G +Y ++++ A+S +R AA G AQ
Sbjct: 407 EQNLVSAEKWLLLAADNGHISAGFELGRLYAYQLEDPVKAMSYFRTAAEKGYADAQYELG 466
Query: 173 ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
P N +EAVK A+ H++A+YQL L +G GV NL+EA R Y AA
Sbjct: 467 LLLTSGTGVPINYKEAVKWWRAATDQSHIQAEYQLGLLYEQGLGVALNLEEARRCYRLAA 526
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 274
G+ A Y + G+G+ + +A KW+++AA GH KAQ + HG G+
Sbjct: 527 TQGHAGAQYQLGNLFDKGKGVEQDYTEAAKWIEQAASQGHMKAQYQLAQMHIHGQGV 583
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + HGRGV K+ A + + AA+ A G++Y D EAA Y+
Sbjct: 185 GALYNHGRGVEKDYRLAKMWYERAAAQNDANAHYSLGVLYHLGQGVIQDYLEAARH-YQI 243
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA L + AQ N EA K A+ G+ AQ L H G GV+
Sbjct: 244 AADLENADAQYNLGVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLYHNGTGVE 303
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +A ++ AA G A YN + G G+P + +A KW AA H A+ +
Sbjct: 304 QNYDKAVAYFKMAALTGDASAQYNLGYMHLKGRGIPQNQEEAAKWFHMAALQDHVNAEFQ 363
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+ L+ G+ M +A+ + +LA G A + ++ + +++ ++ + W
Sbjct: 364 LAM-LYNTGQGMTKDHIEALKWFKLAAHKGHLNAQYCLGLLYE------KEQNLVSAEKW 416
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV NL++A + A +G A G ++ DK + Y +AA
Sbjct: 502 GLLYEQGLGVALNLEEARRCYRLAATQGHAGAQYQLGNLF---DKGKGVEQDYTEAA--- 555
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
K + QA+ GH++AQYQLA G+GV + +AA+ Y +A G+
Sbjct: 556 -------------KWIEQAASQGHMKAQYQLAQMHIHGQGVPKDFAKAAQLYRLSANQGH 602
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+A + + Y G G+ +++A +W+K++ +
Sbjct: 603 QKAQFQLGMLYKKGHGVAQDYQEATRWLKKSLE 635
>gi|184157439|ref|YP_001845778.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|332874101|ref|ZP_08442035.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|384142513|ref|YP_005525223.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385236836|ref|YP_005798175.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|387124613|ref|YP_006290495.1| hypothetical protein ABTJ_02605 [Acinetobacter baumannii MDR-TJ]
gi|407932176|ref|YP_006847819.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|416149191|ref|ZP_11602752.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|417578481|ref|ZP_12229314.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|421629690|ref|ZP_16070412.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|421686544|ref|ZP_16126294.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|421702959|ref|ZP_16142430.1| hypothetical protein B825_06821 [Acinetobacter baumannii ZWS1122]
gi|421709172|ref|ZP_16148534.1| hypothetical protein B837_18740 [Acinetobacter baumannii ZWS1219]
gi|424053126|ref|ZP_17790658.1| hypothetical protein W9G_01815 [Acinetobacter baumannii Ab11111]
gi|445473168|ref|ZP_21452719.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
gi|183209033|gb|ACC56431.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|323517333|gb|ADX91714.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TCDC-AB0715]
gi|332737713|gb|EGJ68606.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|333364607|gb|EGK46621.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB210]
gi|347593006|gb|AEP05727.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385879105|gb|AFI96200.1| TPR repeat-containing protein [Acinetobacter baumannii MDR-TJ]
gi|395567619|gb|EJG28293.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|404568114|gb|EKA73223.1| Sel1 repeat protein [Acinetobacter baumannii IS-143]
gi|404670767|gb|EKB38650.1| hypothetical protein W9G_01815 [Acinetobacter baumannii Ab11111]
gi|407188463|gb|EKE59709.1| hypothetical protein B837_18740 [Acinetobacter baumannii ZWS1219]
gi|407193335|gb|EKE64502.1| hypothetical protein B825_06821 [Acinetobacter baumannii ZWS1122]
gi|407900757|gb|AFU37588.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii TYTH-1]
gi|408700358|gb|EKL45817.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|444769455|gb|ELW93640.1| Sel1 repeat protein [Acinetobacter baumannii OIFC338]
Length = 285
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAIS--LYRQAAVLGD-P 169
+ ++ ++ KA++ + A +G A + GL+Y E K + A + Y +AAV GD P
Sbjct: 73 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEHIKPDYAKAKYWYEKAAVQGDIP 132
Query: 170 AAQP------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ + ++A+K A+ AG AQ L GRGV N +EA++
Sbjct: 133 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQ 192
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 193 WYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQGESNAQFHLGKIYKDG 252
Query: 274 LFTEGEMMKAVVYLELATRAGETAA 298
L + + A + E + AG + A
Sbjct: 253 LGVDKNLSLARTWFEKSAEAGNSYA 277
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G++++ KA+ +L A G + A + G M+ + G
Sbjct: 138 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMF-----------------LHG 180
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q N EEA + +A+I G + AQY L L G G+ + +A +W+L AA G
Sbjct: 181 RGVTQ--NKEEASQWYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQGE 238
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
A ++ Y G G+ + AR W +++A+ G+ A E
Sbjct: 239 SNAQFHLGKIYKDGLGVDKNLSLARTWFEKSAEAGNSYAAQE 280
>gi|344925131|ref|ZP_08778592.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 900
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDP 169
G GV K++ + K AA+G A + G Y + ++K A S Y++AA G
Sbjct: 162 GEGVNKDVKQGYAWAEKAAAQGYAKAQLILGNCYLTGFGIEKDAGKAFSWYQKAAHQGAA 221
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ A+ +AV +A+ + AQY+LA C H+G GV N ++A
Sbjct: 222 EAQYKLAECYDKGYGVAADPAQAVAYYQKAADQNYAVAQYKLAECYHKGHGVAANPEQAF 281
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
WY + A+ G+ +A + LCY G+G+ RQA W K+AAD + +AQ +
Sbjct: 282 TWYKQLADQGHAKAHHGVGLCYYEGQGVIRDRRQAFDWFKKAADKKYAEAQYQ 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A+ + + + G GV N ++A + + A +G A GL Y+E D+++A
Sbjct: 257 AVAQYKLAECYHKGHGVAANPEQAFTWYKQLADQGHAKAHHGVGLCYYEGQGVIRDRRQA 316
Query: 156 ------------AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
A + Y+ A + ++ +A +A+ H +AQYQLA
Sbjct: 317 FDWFKKAADKKYAEAQYQLAQCYHEGEGVAQDSAQAFAWYQKAAEQNHAKAQYQLAGFYA 376
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+G+ VD NL +A Y RAA GY A Y + CY G G+ RQA W +AA H
Sbjct: 377 KGQIVDQNLAQAFACYYRAASQGYAEAQYQLAECYHKGHGVAADSRQAVAWYHKAAAQNH 436
Query: 264 GKAQLEHGLGLFT-EGEMMKAVVYLELATRAGE 295
KAQ+E L +T G V + L +A E
Sbjct: 437 AKAQVELALCYYTGHGVTADPVQAISLCQKAAE 469
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV------DAGL--------- 145
A L G + G G+ K+ KA + K A +G+ A D G
Sbjct: 185 AKAQLILGNCYLTGFGIEKDAGKAFSWYQKAAHQGAAEAQYKLAECYDKGYGVAADPAQA 244
Query: 146 --MYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
Y + + A++ Y+ A AN E+A Q + GH +A + + LC +
Sbjct: 245 VAYYQKAADQNYAVAQYKLAECYHKGHGVAANPEQAFTWYKQLADQGHAKAHHGVGLCYY 304
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G+GV + ++A W+ +AA+ Y A Y + CY GEG+ QA W ++AA+ H
Sbjct: 305 EGQGVIRDRRQAFDWFKKAADKKYAEAQYQLAQCYHEGEGVAQDSAQAFAWYQKAAEQNH 364
Query: 264 GKAQLEHGLGLFTEGEMM 281
KAQ + G + +G+++
Sbjct: 365 AKAQYQLA-GFYAKGQIV 381
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G+GV ++ +A D F K A + A Y E + A + Y++AA
Sbjct: 303 YYEGQGVIRDRRQAFDWFKKAADKKYAEAQYQLAQCYHEGEGVAQDSAQAFAWYQKAAEQ 362
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ N +A Y+A+ G+ AQYQLA C H+G GV + +
Sbjct: 363 NHAKAQYQLAGFYAKGQIVDQNLAQAFACYYRAASQGYAEAQYQLAECYHKGHGVAADSR 422
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+A WY +AA + +A +LCY G G+ QA ++AA+ G +AQ G
Sbjct: 423 QAVAWYHKAAAQNHAKAQVELALCYYTGHGVTADPVQAISLCQKAAEQGLAEAQCRLG 480
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV + +A+ + K AA+ A V+ L Y Y V DP
Sbjct: 411 YHKGHGVAADSRQAVAWYHKAAAQNHAKAQVELALCY------------YTGHGVTADPV 458
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+A+ L +A+ G AQ +L C G GV+ N+++A W+ +AA+ G A
Sbjct: 459 -------QAISLCQKAAEQGLAEAQCRLGNCYLSGYGVERNVEKAFEWFRKAADQGLAEA 511
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
Y + CY GEG+ QA +W K+A + + A G G E +++AV Y
Sbjct: 512 QYRVAYCYDNGEGVAADPVQAFEWYKKATEQRYTDAYYPVGCCYLNGKGVERSLIEAVKY 571
Query: 287 LELATRA 293
+ +A
Sbjct: 572 FVQSNQA 578
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+Y++ ++ + + E+A + +A+ GH AQ++L+ C G GV +L++
Sbjct: 85 EIYKKGEIISE------DQEKAFEWFKRAADQGHAEAQFRLSNCYVIGYGVTKDLEKGLA 138
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LG 273
+AAE G+V A + + Y GEG+ +Q W ++AA G+ KAQL G G
Sbjct: 139 LCEKAAEQGHVAAQFIVARSYFRGEGVNKDVKQGYAWAEKAAAQGYAKAQLILGNCYLTG 198
Query: 274 LFTEGEMMKAVVYLELATRAGETAADH 300
E + KA + + A G A +
Sbjct: 199 FGIEKDAGKAFSWYQKAAHQGAAEAQY 225
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
LL QA A +AQY+LA +G + + ++A W+ RAA+ G+ A + S CY G
Sbjct: 68 LLLQAE-ANDPQAQYELAEIYKKGEIISEDQEKAFEWFKRAADQGHAEAQFRLSNCYVIG 126
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQL 268
G+ + ++AA+ GH AQ
Sbjct: 127 YGVTKDLEKGLALCEKAAEQGHVAAQF 153
>gi|290977798|ref|XP_002671624.1| predicted protein [Naegleria gruberi]
gi|284085194|gb|EFC38880.1| predicted protein [Naegleria gruberi]
Length = 565
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G GV K+ +KA + F KGA +G ++ G Y E D K+A + Y +
Sbjct: 62 GCKYMDGSGVEKDSEKAFEWFSKGAEQGCLESIHKVGYFYHHGLGVEQDYKKA-MEWYLK 120
Query: 163 AAVLGDPAAQPANAEEAVKLLY------------------QASIAGHVRAQYQLALCLHR 204
AA A ++ + +LY +A+ G+ AQ+ + +
Sbjct: 121 AA-----DRNLAKSQNNIGVLYRSGEGVAKDLSKSMEWYLKAAENGNEIAQFNIGASYDK 175
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G GV+ + ++ WYL++A+ GY +A +N + Y + EG+ +A +W RAA GH
Sbjct: 176 GVGVEQDKPKSFEWYLKSAKNGYAKAQFNVACAYDYAEGVEKDLSKAVEWYLRAAKNGHA 235
Query: 265 KAQL------EHGLGLFTEGEMMKAVVYLELATRAGET 296
AQ E+G G+ E + KA+ + A+ G T
Sbjct: 236 DAQFNVGWSYENGEGI--EKDYAKAMTWYLTASENGNT 271
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G GV K+L K+++ +LK A G+ +A + G Y E DK ++ Y +
Sbjct: 134 GVLYRSGEGVAKDLSKSMEWYLKAAENGNEIAQFNIGASYDKGVGVEQDKPKS-FEWYLK 192
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G AQ + +AV+ +A+ GH AQ+ + G G++
Sbjct: 193 SAKNGYAKAQFNVACAYDYAEGVEKDLSKAVEWYLRAAKNGHADAQFNVGWSYENGEGIE 252
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ +A WYL A+E G + N Y G G+ + +A +W + A+
Sbjct: 253 KDYAKAMTWYLTASENGNTDSYTNIGFLYRNGRGVEKNLEKAFEWYMKGAE 303
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ + GV K+L KA++ +L+ A G A + G W + E Y +A
Sbjct: 209 YDYAEGVEKDLSKAVEWYLRAAKNGHADAQFNVG---WSYENGEGIEKDYAKA------- 258
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ AS G+ + + GRGV+ NL++A WY++ AE ++
Sbjct: 259 ---------MTWYLTASENGNTDSYTNIGFLYRNGRGVEKNLEKAFEWYMKGAEKDVKQS 309
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
N + YS G G+ ++A W ++ + + K
Sbjct: 310 QNNVANAYSNGYGVEKDLKKALFWRLKSVNTNNFK 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
S Y D + ++E+A + + + G + + +++ H G GV+ + ++A
Sbjct: 57 SYYTLGCKYMDGSGVEKDSEKAFEWFSKGAEQGCLESIHKVGYFYHHGLGVEQDYKKAME 116
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
WYL+AA+ ++ N + Y GEG+ ++ +W +AA+ G+ AQ G
Sbjct: 117 WYLKAADRNLAKSQNNIGVLYRSGEGVAKDLSKSMEWYLKAAENGNEIAQFNIG 170
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
DP Q E + K + ++ + Y L G GV+ + ++A W+ + AE G
Sbjct: 33 NDPQQQIIKNEPSSK---KQAVNQSTESYYTLGCKYMDGSGVEKDSEKAFEWFSKGAEQG 89
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ +++ Y G G+ +++A +W +AAD K+Q G+ L+ GE
Sbjct: 90 CLESIHKVGYFYHHGLGVEQDYKKAMEWYLKAADRNLAKSQNNIGV-LYRSGE 141
>gi|422318977|ref|ZP_16400065.1| hypothetical protein HMPREF0005_05674, partial [Achromobacter
xylosoxidans C54]
gi|317406380|gb|EFV86604.1| hypothetical protein HMPREF0005_05674 [Achromobacter xylosoxidans
C54]
Length = 473
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + G G +++ KA++ F K A +G A + G MY+ A A+ +R+A
Sbjct: 196 GVMYADGLGGPRDVGKAVEWFRKAAEQGQPKAQNNLGAMYFTGSGVPADDKLAVQWWRRA 255
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AAQ P + +A + L +A+ H AQ L +G GV
Sbjct: 256 ADQGNAAAQDRLGGAYLSGRGVPQDDLQASQWLRKAAEQDHAPAQDTLGTLYEQGLGVPK 315
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ +A +WY RAAE G A YN + Y FG G+P AR W +AAD G+ +AQ
Sbjct: 316 DESQAVQWYRRAAEQGLDTAQYNLARQYDFGRGVPRDLASARAWYGKAADQGYPRAQF 373
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 25/233 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAA-- 164
+ +GRGV ++ A K A +G+ A G MY + +++ A+ +R+AA
Sbjct: 91 YANGRGVPQDYALAAQWCEKAAVQGNAEAQTMLGRMYAQGQGVARQEDLAVQWWRRAADQ 150
Query: 165 -------VLGD-----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LGD PA + +A+ A + A+ GH AQ L + G G ++
Sbjct: 151 GYAEARYQLGDHFFDAPAPRRDDAQ-ARRWFALAAAQGHAEAQNNLGVMYADGLGGPRDV 209
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A W+ +AAE G +A N Y G G+P + A +W +RAAD G+ AQ G
Sbjct: 210 GKAVEWFRKAAEQGQPKAQNNLGAMYFTGSGVPADDKLAVQWWRRAADQGNAAAQDRLG- 268
Query: 273 GLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G + G + ++A +L A A + +Q +D + V
Sbjct: 269 GAYLSGRGVPQDDLQASQWLRKAAEQDHAPAQDTLGTLYEQGLGVPKDESQAV 321
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 22/203 (10%)
Query: 144 GLMYWEMDKKE----AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQA 186
GLMY E A++ R+AA GD AQ P + A + +A
Sbjct: 52 GLMYANAQGGEKDDAQAVAWLRRAADQGDAGAQFNLAVMYANGRGVPQDYALAAQWCEKA 111
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
++ G+ AQ L +G+GV A +W+ RAA+ GY A Y +
Sbjct: 112 AVQGNAEAQTMLGRMYAQGQGVARQEDLAVQWWRRAADQGYAEARYQLGDHFFDAPAPRR 171
Query: 247 SHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVK 302
QAR+W AA GH +AQ G+ GL ++ KAV + A G+ A +
Sbjct: 172 DDAQARRWFALAAAQGHAEAQNNLGVMYADGLGGPRDVGKAVEWFRKAAEQGQPKAQNNL 231
Query: 303 NVILQQLSATSRDRAMLVVDSWR 325
+ S D L V WR
Sbjct: 232 GAMYFTGSGVPADD-KLAVQWWR 253
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L L +G + + +A W RAA+ G A +N ++ Y+ G G+P + A +
Sbjct: 47 AQDGLGLMYANAQGGEKDDAQAVAWLRRAADQGDAGAQFNLAVMYANGRGVPQDYALAAQ 106
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGE 279
W ++AA G+ +AQ G ++ +G+
Sbjct: 107 WCEKAAVQGNAEAQTMLGR-MYAQGQ 131
>gi|119947297|ref|YP_944977.1| Sel1-like repeat-containing serine/threonine protein kinase
[Psychromonas ingrahamii 37]
gi|119865901|gb|ABM05378.1| Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like
repeat protein [Psychromonas ingrahamii 37]
Length = 448
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV ++ +A + K A +G + A + GLMY + + ++
Sbjct: 239 YTSGYGVTQSYKQATYWYNKAAEQGYSDAQYNMGLMY------NSGNNGFK--------- 283
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N EA + +A+ G+ AQY + L + G GV + ++A +WY +AAE + A
Sbjct: 284 ----NYTEATRWYRKAAKQGNADAQYNMGLMYNNGHGVIQDYKQALQWYNKAAEQQHAGA 339
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAV 284
YN + Y +G+G+ ++QA W +AA+ GH AQ E+G G+ + +A
Sbjct: 340 QYNMGMMYDYGQGVSQDYKQAADWYHKAAEQGHANAQYYLGMMYENGHGVLQ--DYRQAY 397
Query: 285 VYLELATRAGE 295
++L LA G+
Sbjct: 398 MWLNLARYNGD 408
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV ++ +A + K A + T A GLMY DKK+A Y++
Sbjct: 92 GLMYNNGQGVLQDYKQAAQWYRKAAEQRHTGAQYYLGLMYDNAQGVRQDKKQATY-WYQK 150
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AQ P + +A + +A+ GH AQY L L G+GV
Sbjct: 151 AAEQNYANAQYSMGERYAIGNTVPQDYRQAAQWYRKAAQQGHAAAQYDLGLMYSSGQGVP 210
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++AA+WY +AAE + A Y L Y+ G G+ S++QA W +AA+ G+ AQ
Sbjct: 211 QSSEQAAQWYHKAAEQEHAEAQYTLGLIYTSGYGVTQSYKQATYWYNKAAEQGYSDAQYN 270
Query: 270 HGLGLFTEGE 279
GL ++ G
Sbjct: 271 MGL-MYNSGN 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + Y + + P + +EA +A+ GHV AQY L L + G+GV + ++A
Sbjct: 49 ANAQYNLGTIYANGLGIPQDYKEAALWSRRAAEQGHVGAQYYLGLMYNNGQGVLQDYKQA 108
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A+WY +AAE + A Y L Y +G+ +QA W ++AA+ + AQ G
Sbjct: 109 AQWYRKAAEQRHTGAQYYLGLMYDNAQGVRQDKKQATYWYQKAAEQNYANAQYSMG 164
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G AA + + A K + + G AQY L G G+ + +EAA W RAAE G
Sbjct: 24 GMNAADKGDFKTAYKEWFPLAQFGDANAQYNLGTIYANGLGIPQDYKEAALWSRRAAEQG 83
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+V A Y L Y+ G+G+ ++QA +W ++AA+ H AQ GL
Sbjct: 84 HVGAQYYLGLMYNNGQGVLQDYKQAAQWYRKAAEQRHTGAQYYLGL 129
>gi|421656421|ref|ZP_16096728.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408505405|gb|EKK07128.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 288
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y E K + A Y +AA GD A
Sbjct: 76 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEYIKPDYVKAKYWYEKAAAQGDIA 135
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ + ++A+K A+ AG AQ LA GRGV N EA++
Sbjct: 136 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 195
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 196 WYLKAAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDG 255
Query: 274 LFTEGEMMKAVVYLELATRAGETAA 298
L + + A ++ E + G + A
Sbjct: 256 LGVDKNLSLARIWFEKSAEVGNSYA 280
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 25 KDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQ-LRA 83
DN R + +S IK + RS K+ +G A V+ P L+A
Sbjct: 28 NDNTRQQ-QSSQTNTNIKNNIDLTDIRS-KAEKGDPEAQYNLGVMYAEGYKDIQPDILKA 85
Query: 84 ASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
S N + + LL G + ++ + KA + K AA+G ++ +
Sbjct: 86 IEWYTLSANQGYVNAQYNLGLLYMGNEY-----IKPDYVKAKYWYEKAAAQGDIASLNEL 140
Query: 144 GLMYWE----MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQA 186
G Y + + AI Y AA GD AQ N EA + +A
Sbjct: 141 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQWYLKA 200
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
++ G + AQY L L G G+ + +A +W+L AA G A Y+ Y G G+
Sbjct: 201 AVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVDK 260
Query: 247 SHRQARKWMKRAADCGHGKAQLE 269
+ AR W +++A+ G+ A E
Sbjct: 261 NLSLARIWFEKSAEVGNSYAAQE 283
>gi|432903884|ref|ZP_20113155.1| hypothetical protein A13Y_01518 [Escherichia coli KTE194]
gi|433038951|ref|ZP_20226554.1| hypothetical protein WIE_02303 [Escherichia coli KTE113]
gi|431434318|gb|ELH15968.1| hypothetical protein A13Y_01518 [Escherichia coli KTE194]
gi|431551858|gb|ELI25824.1| hypothetical protein WIE_02303 [Escherichia coli KTE113]
Length = 378
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ + G GV ++ A + K AA+ A V+ ++Y E D ++A S Y +
Sbjct: 121 GEMYDDGLGVSQDYQHAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQDYRQAK-SWYEK 179
Query: 163 AAVLGDPAAQ------PANAEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGV 208
AA P AQ ANA V+ YQ A+ AQ+ L + ++G GV
Sbjct: 180 AAAQNSPDAQFALGILYANAN-GVEQDYQQAKDWYEKAAEQNFANAQFNLGMLYYKGEGV 238
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA+ GH AQ
Sbjct: 239 KQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQY 298
Query: 269 EHGLGLFTEGE 279
G+ ++ GE
Sbjct: 299 NLGV-IYENGE 308
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSPDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQAAVLGDPAA---QPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
+ K E +RQA + AA QP AQY L +
Sbjct: 233 Y---KGEGVKQNFRQAREWFEKAASQNQP-------------------NAQYNLGQIYYY 270
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G+GV + ++A W+ +AAE G+V A YN + Y GEG+ +++QA+ W ++AA
Sbjct: 271 GQGVTQSYRQAKDWFEKAAEKGHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDA 330
Query: 265 KAQLEHGLGLFTE 277
+AQ E LG+ E
Sbjct: 331 QAQFE--LGVMNE 341
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV++N +A + F K A++ A + G +Y
Sbjct: 209 AKDWYEKAAEQNFANAQFNLGMLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YRQA + AA+ GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRQAKDWFEKAAEK----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V N Q+A WY +AA +A + + G+G + +QAR + +R+ + G
Sbjct: 310 VSQNYQQAKAWYEKAASQNDAQAQFELGVMNELGQGESIDLKQARHYYERSCNNG 364
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V AQY L L G +D + Q+A WY +AA+ RA + Y+ G G+ ++
Sbjct: 40 GDVEAQYALGLMYLYGEILDVDYQQAKIWYEKAADQNDPRAQAKLGVMYANGLGVNQDYQ 99
Query: 250 QARKWMKR 257
Q++ W ++
Sbjct: 100 QSKLWYEK 107
>gi|418530668|ref|ZP_13096591.1| hypothetical protein CTATCC11996_13280 [Comamonas testosteroni ATCC
11996]
gi|371452387|gb|EHN65416.1| hypothetical protein CTATCC11996_13280 [Comamonas testosteroni ATCC
11996]
Length = 267
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEA 155
+A L G+ + GRGV ++ +KA F AA+G+ L+ + GLMY +
Sbjct: 15 DAQAQLDLGQIYVEGRGVAQSDEKAAHWFGLAAAQGNALSQSNLGLMYDRGRGVKQSDQE 74
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR +A G+ Q + +EAVK A+ + AQY L L
Sbjct: 75 AVKWYRLSAAQGEANGQFNLGVMYEDGRGVEQSDQEAVKWYRLAAAQNLLDAQYNLGLMY 134
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV+ + QEAA+W+ A G+ N ++ Y+ G G+P ++A + + AA+ G
Sbjct: 135 VSGRGVEQSDQEAAKWFGITAAKGHDSGQANLAVMYATGRGVPRDEKEAARLLGLAAEQG 194
Query: 263 HGKAQLEHGLGLFTEGEMMK 282
+ AQ+ G +F EG +K
Sbjct: 195 NATAQVNLGT-MFEEGRGVK 213
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
AQPA+ LL++A AG +AQ L GRGV + ++AA W+ AA G +
Sbjct: 2 AQPAD------LLHKAQ-AGDAQAQLDLGQIYVEGRGVAQSDEKAAHWFGLAAAQGNALS 54
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
N L Y G G+ S ++A KW + +A G Q G+ ++ +G
Sbjct: 55 QSNLGLMYDRGRGVKQSDQEAVKWYRLSAAQGEANGQFNLGV-MYEDG 101
>gi|147906805|ref|NP_001090027.1| sel-1 suppressor of lin-12-like precursor [Xenopus laevis]
gi|63100236|gb|AAH95916.1| MGC99195 protein [Xenopus laevis]
Length = 822
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E E A+ +R+AA +G+
Sbjct: 407 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDSVTQSNETALQYFRKAADMGN 466
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P + E A+K +A+ G V Q QL + G GV + ++A
Sbjct: 467 PVGQSGLGMAYLYGRGVPVDYELALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQA 526
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 527 LKYFNLASQGGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSDRLMTAYNSY 586
Query: 276 TEGEM-MKAVVYLELATRAGETAADHVKNVILQQLSA 311
G + AV YL LA + E A + ++ Q+ +A
Sbjct: 587 KNGNANIAAVQYLLLAEQGYEVAQSNAAFILDQKEAA 623
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 282 GFLYASGLGLNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 341
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 342 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 401
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + + S+ A ++ ++A
Sbjct: 402 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDSVTQSNETALQYFRKA 461
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 462 ADMGNPVGQ--SGLGM 475
>gi|223935384|ref|ZP_03627301.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
gi|223895794|gb|EEF62238.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
Length = 693
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GV N+D+ + A +G+ + D GL+ + I+ +R+A
Sbjct: 195 GMAYVAGLGVATNVDEGVRLLTLSAEKGTVQSQFDLGLVCVDPTSGHYNPSEGINWFRRA 254
Query: 164 A---------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A VLGD + P + E + +A+ G AQ QLA G GV+
Sbjct: 255 AENDYALAQCVLGDCYCKGKLVPKDPVEGSRWFRKAAKQGESSAQLQLASNYASGEGVEK 314
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EAA+WY AAE A Y ++C G+G+P + ++ +W KRAAD H AQLE
Sbjct: 315 NEAEAAKWYRMAAEKELAEAQYMYAICLFSGKGVPKNQSESAQWYKRAADQNHVLAQLEL 374
Query: 271 G 271
G
Sbjct: 375 G 375
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+R+AA G+ +AQ N EA K A+ AQY A+CL G+
Sbjct: 287 FRKAAKQGESSAQLQLASNYASGEGVEKNEAEAAKWYRMAAEKELAEAQYMYAICLFSGK 346
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV N E+A+WY RAA+ +V A Y+ G G+P+ + +A KW ++A+ G+ A
Sbjct: 347 GVPKNQSESAQWYKRAADQNHVLAQLELGDDYALGRGVPVDYGEAVKWYYKSAEAGNALA 406
Query: 267 QLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVD 322
Q + G LGL + AV + E A + G A + V ++D + V
Sbjct: 407 QFQLGTCCLLGLGVQTNFTLAVKWFEKAGQQGVVEAQYKCGVAYLIGEGVAKD--LKVAT 464
Query: 323 SWRAMPSLH 331
+W + + H
Sbjct: 465 NWFYLAASH 473
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 19/204 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G+GV KN ++ + + A + LA ++ G Y LG P
Sbjct: 345 GKGVPKNQSESAQWYKRAADQNHVLAQLELGDDY-----------------ALGRGV--P 385
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ EAVK Y+++ AG+ AQ+QL C G GV N A +W+ +A + G V A Y
Sbjct: 386 VDYGEAVKWYYKSAEAGNALAQFQLGTCCLLGLGVQTNFTLAVKWFEKAGQQGVVEAQYK 445
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 293
+ Y GEG+ + A W AA G AQL+ G + +A + A
Sbjct: 446 CGVAYLIGEGVAKDLKVATNWFYLAASHGKVMAQLQLGNCHIKDKNYTEAAKWFLKAAEG 505
Query: 294 GETAADHVKNVILQQLSATSRDRA 317
G A + ++ + +D A
Sbjct: 506 GNAQAQYWLGILYSKGLGVPQDYA 529
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAA---- 164
G GV+ N A+ F K +G A G+ Y D K A Y A+
Sbjct: 417 GLGVQTNFTLAVKWFEKAGQQGVVEAQYKCGVAYLIGEGVAKDLKVATNWFYLAASHGKV 476
Query: 165 ----VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
LG+ + N EA K +A+ G+ +AQY L + +G GV + E ARW
Sbjct: 477 MAQLQLGNCHIKDKNYTEAAKWFLKAAEGGNAQAQYWLGILYSKGLGVPQDYAEDARWTR 536
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AAE G A + + Y G+G+P ++ +A KW + AD G+ AQ GL +++G +
Sbjct: 537 KAAEQGLAEAEGSMAFLYEQGKGVPQNNGEALKWYLKGADHGNPVAQFNLGLA-YSKGSL 595
Query: 281 -----MKAVVYLELATRAGETAADH 300
+AV + A G AA +
Sbjct: 596 GITNAAEAVKWFRKAAEQGVAAAQN 620
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 32 LTASARKARIKRRSRFSCS-RSIKSTEGHDFASLPFDVLNKIAAS-FTLPQLRAASLVCK 89
LT SA K + +S+F + T GH S + + A + + L Q CK
Sbjct: 215 LTLSAEKGTV--QSQFDLGLVCVDPTSGHYNPSEGINWFRRAAENDYALAQCVLGDCYCK 272
Query: 90 S------------WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
W E+ L+ + G GV KN +A + A +
Sbjct: 273 GKLVPKDPVEGSRWFRKAAKQGESSAQLQLASNYASGEGVEKNEAEAAKWYRMAAEK--- 329
Query: 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQ 197
+ +A MY AI L+ V P N E+ + +A+ HV AQ +
Sbjct: 330 -ELAEAQYMY--------AICLFSGKGV-------PKNQSESAQWYKRAADQNHVLAQLE 373
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L GRGV + EA +WY ++AE G A + C G G+ + A KW ++
Sbjct: 374 LGDDYALGRGVPVDYGEAVKWYYKSAEAGNALAQFQLGTCCLLGLGVQTNFTLAVKWFEK 433
Query: 258 AADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQL 309
A G +AQ + G+ L EG L++AT AA H K + QL
Sbjct: 434 AGQQGVVEAQYKCGVAYLIGEGVAKD----LKVATNWFYLAASHGKVMAQLQL 482
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
QP+ ++ +K L A+ G AQY+L RG GV N EA RWY +AAE A
Sbjct: 96 QPSEWDKQIKSLMTAANRGDRVAQYKLGTAYDRGFGVPTNNVEALRWYRKAAEQSLPEAQ 155
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
Y Y+FG+G+ + W ++A D + A H LG+
Sbjct: 156 YLVGRAYAFGDGIAKDQAASIGWYQKAVDQNYVPAM--HNLGM 196
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N +AL +LKGA G+ +A + GL Y K I+
Sbjct: 554 YEQGKGVPQNNGEALKWYLKGADHGNPVAQFNLGLAY---SKGSLGIT------------ 598
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
NA EAVK +A+ G AQ L G GV +L EA +WY A
Sbjct: 599 ----NAAEAVKWFRKAAEQGVAAAQNSLGYAYDTGNGVTPDLVEAYKWYTLA 646
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 29/163 (17%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMY---------------WEMDKKEAAIS----- 158
KN +A FLK A G+ A G++Y W E ++
Sbjct: 490 KNYTEAAKWFLKAAEGGNAQAQYWLGILYSKGLGVPQDYAEDARWTRKAAEQGLAEAEGS 549
Query: 159 ---LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
LY Q + P N EA+K + + G+ AQ+ L L +G N EA
Sbjct: 550 MAFLYEQGKGV------PQNNGEALKWYLKGADHGNPVAQFNLGLAYSKGSLGITNAAEA 603
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+W+ +AAE G A + Y G G+ +A KW A
Sbjct: 604 VKWFRKAAEQGVAAAQNSLGYAYDTGNGVTPDLVEAYKWYTLA 646
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 19/164 (11%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
K+ G DK + S + A RG +A G Y D+
Sbjct: 88 KQINSLHGQPSEWDKQIKSLMTAANRGDRVAQYKLGTAY---DRGFGV------------ 132
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P N EA++ +A+ AQY + G G+ + + WY +A + YV
Sbjct: 133 ----PTNNVEALRWYRKAAEQSLPEAQYLVGRAYAFGDGIAKDQAASIGWYQKAVDQNYV 188
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
AM+N + Y G G+ + + + + +A+ G ++Q + GL
Sbjct: 189 PAMHNLGMAYVAGLGVATNVDEGVRLLTLSAEKGTVQSQFDLGL 232
>gi|149178612|ref|ZP_01857198.1| hypothetical protein PM8797T_07352 [Planctomyces maris DSM 8797]
gi|148842538|gb|EDL56915.1| hypothetical protein PM8797T_07352 [Planctomyces maris DSM 8797]
Length = 265
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV+++ ++A++ F K A +G A + G MY + E YRQA
Sbjct: 115 GTMYLNGEGVKQDHNQAIEWFRKSAEQGFDAAQFNIGAMYRD---GEGVKQDYRQALEWF 171
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA+ NA+ AQY L ++G GV +L+++ W+ ++AE G
Sbjct: 172 RKAAEQQNAD----------------AQYNLGFMYYKGEGVKQDLKQSLEWFRKSAEQGE 215
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN + Y+ G+G+ + QA W ++AA GH AQ
Sbjct: 216 TDAQYNLGIMYANGKGVKQDYNQAVAWFRKAASQGHELAQ 255
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+AM G + +G GV ++ KA++ + K A +G+ + G MY
Sbjct: 71 DAMEQSNLGVLYANGVGVEQDPFKAMEWYQKAAKQGNRVGQYHIGTMY------------ 118
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ G+ Q N +A++ +++ G AQ+ + G GV + ++A W+
Sbjct: 119 -----LNGEGVKQDHN--QAIEWFRKSAEQGFDAAQFNIGAMYRDGEGVKQDYRQALEWF 171
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+AAE A YN Y GEG+ +Q+ +W +++A+ G AQ G+ ++ G+
Sbjct: 172 RKAAEQQNADAQYNLGFMYYKGEGVKQDLKQSLEWFRKSAEQGETDAQYNLGI-MYANGK 230
Query: 280 MMK 282
+K
Sbjct: 231 GVK 233
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
+++ + + + LK A G + + G++Y V DP
Sbjct: 52 LKQEMRQEFERCLKAAESGDAMEQSNLGVLY------------ANGVGVEQDPF------ 93
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+A++ +A+ G+ QY + G GV + +A W+ ++AE G+ A +N
Sbjct: 94 -KAMEWYQKAAKQGNRVGQYHIGTMYLNGEGVKQDHNQAIEWFRKSAEQGFDAAQFNIGA 152
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELAT 291
Y GEG+ +RQA +W ++AA+ + AQ G ++ +GE +K ++ + +
Sbjct: 153 MYRDGEGVKQDYRQALEWFRKAAEQQNADAQYNLGF-MYYKGEGVKQDLKQSLEWFRKSA 211
Query: 292 RAGETAADHVKNVILQQLSATSRDRAMLV 320
GET A + ++ +D V
Sbjct: 212 EQGETDAQYNLGIMYANGKGVKQDYNQAV 240
>gi|416242044|ref|ZP_11633178.1| tetratricopeptide repeat family protein [Moraxella catarrhalis BC7]
gi|326571605|gb|EGE21620.1| tetratricopeptide repeat family protein [Moraxella catarrhalis BC7]
Length = 302
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+GVR++ K+++ + K A +G A + LMY + D A + +A
Sbjct: 79 GVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKA 138
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + + +AV+ +A+ G+ AQ+ LAL + G+GV
Sbjct: 139 ANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQ 198
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ QEA WY +AA G+ A YN + Y G+G+ + +A +W +AA+ G +AQ
Sbjct: 199 DDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNL 258
Query: 271 GLGLFTEGEMMK 282
G+ ++ EG+ ++
Sbjct: 259 GV-MYDEGQGVR 269
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
+ G GVR++ KA + F K A +G A G+MY D+ + A+ Y +A
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY---DEGQGVRQDYYKAVEWYTKA 174
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +EAV+ +A+ GH AQY L + + G+GV
Sbjct: 175 ANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQ 234
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A W+ +AA G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 235 DYHKAVEWFTKAANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 286
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQ- 172
+ N KA + + K A +G A + G+MY+E ++ Y +AA G AQ
Sbjct: 53 QGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQF 112
Query: 173 ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+ +A + +A+ G AQ+ L + G+GV + +A WY
Sbjct: 113 NLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYT 172
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA GY A +N +L Y G+G+ ++A +W +AA GH +AQ G+ ++ EG+
Sbjct: 173 KAANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGV-MYYEGQG 231
Query: 281 MK 282
++
Sbjct: 232 VR 233
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
L D Q N +A + +A+ G AQ+ L + + G+GV + ++ WY +AA+
Sbjct: 46 LADEYYQQGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQ 105
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ EG+ ++
Sbjct: 106 GYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYDEGQGVRQDY 164
Query: 286 Y--LELATRA 293
Y +E T+A
Sbjct: 165 YKAVEWYTKA 174
>gi|299541678|ref|ZP_07052008.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZC1]
gi|298725773|gb|EFI66407.1| suppressor of lin-12-like protein [Lysinibacillus fusiformis ZC1]
Length = 638
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKEAAISLYRQAAVLGDPAAQ---- 172
+NL A L A G A + G +Y ++++ A+S +R AA G AQ
Sbjct: 407 EQNLVSAEKWLLLAADNGHISAGFELGRLYAYQLEDPVKAMSYFRTAAEKGYADAQYELG 466
Query: 173 ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
P N +EAVK A+ H++A+YQL L +G GV NL+EA R Y AA
Sbjct: 467 LLLTSGTGVPINYKEAVKWWRAATDQSHIQAEYQLGLLYEQGLGVALNLEEARRCYRLAA 526
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 274
G+ A Y + G+G+ + +A KW+++AA GH KAQ + HG G+
Sbjct: 527 TQGHAGAQYQLGNLFDKGKGVEQDYTEAAKWIEQAASQGHMKAQYQLAQMHIHGQGV 583
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G+ +N ++A + A +G+T A + G +Y
Sbjct: 257 GVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLY-------------------H 297
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N ++AV A++ G AQY L +G G+ N +EAA+W+ AA +
Sbjct: 298 NGTGVEQNYDKAVAYFKMAALTGDASAQYNLGYMHLKGCGIPQNQEEAAKWFHMAALQDH 357
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
V A + ++ Y+ G+G+ H +A KW K AA GH AQ GL E ++ A +L
Sbjct: 358 VNAEFQLAMLYNTGQGMTKDHIEALKWFKLAAHKGHLNAQYCLGLLYEKEQNLVSAEKWL 417
Query: 288 ELATRAGETAA 298
LA G +A
Sbjct: 418 LLAADNGHISA 428
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + HGRGV K+ A + + AA+ A G++Y D EAA Y+
Sbjct: 185 GALYNHGRGVEKDYRLAKMWYERAAAQNDANAHYSLGVLYHLGQGVIQDYLEAARH-YQI 243
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA L + AQ N EA K A+ G+ AQ L H G GV+
Sbjct: 244 AADLENADAQYNLGVLYNQGLGLSQNFNEAAKWYTLAANQGNTSAQNNLGFLYHNGTGVE 303
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +A ++ AA G A YN + G G+P + +A KW AA H A+ +
Sbjct: 304 QNYDKAVAYFKMAALTGDASAQYNLGYMHLKGCGIPQNQEEAAKWFHMAALQDHVNAEFQ 363
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+ L+ G+ M +A+ + +LA G A + ++ + +++ ++ + W
Sbjct: 364 LAM-LYNTGQGMTKDHIEALKWFKLAAHKGHLNAQYCLGLLYE------KEQNLVSAEKW 416
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV NL++A + A +G A G ++ DK + Y +AA
Sbjct: 502 GLLYEQGLGVALNLEEARRCYRLAATQGHAGAQYQLGNLF---DKGKGVEQDYTEAA--- 555
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
K + QA+ GH++AQYQLA G+GV + +AA+ Y +A G+
Sbjct: 556 -------------KWIEQAASQGHMKAQYQLAQMHIHGQGVPKDFAKAAQLYRLSANQGH 602
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+A + + Y G G+ +++A +W+K++ +
Sbjct: 603 QKAQFQLGMLYKKGHGVAQDYQEATRWLKKSLE 635
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E AVK A+ G AQY L + GRGV+ + + A WY RAA A Y+ +
Sbjct: 163 EHAVKWFEVAAQNGDASAQYNLGALYNHGRGVEKDYRLAKMWYERAAAQNDANAHYSLGV 222
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELAT 291
Y G+G+ + +A + + AAD + AQ G+ L+ +G +A + LA
Sbjct: 223 LYHLGQGVIQDYLEAARHYQIAADLENADAQYNLGV-LYNQGLGLSQNFNEAAKWYTLAA 281
Query: 292 RAGETAA 298
G T+A
Sbjct: 282 NQGNTSA 288
>gi|325267702|ref|ZP_08134353.1| Sel1 repeat protein [Kingella denitrificans ATCC 33394]
gi|324980826|gb|EGC16487.1| Sel1 repeat protein [Kingella denitrificans ATCC 33394]
Length = 321
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 25/192 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
EA L W + +G+GVR++ +A+ + + A +G A GLMY D +
Sbjct: 56 EAQYNLGW--MYYNGQGVRQDYAEAVKWYRQAAEQGVAEAQFSLGLMY---DNGQGVRQD 110
Query: 156 ---AISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLA 199
A YRQAA G AQ + EA+K QA G +A+ L
Sbjct: 111 YAEAFRWYRQAAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQAVEQGVAQAKNNLG 170
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +GRGV + EA RWY +AAE GY A +N Y+ G G+ + +A KW ++AA
Sbjct: 171 VMYAKGRGVRKDDAEALRWYRQAAEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAA 230
Query: 260 DCGHGKAQLEHG 271
+ G+ AQ G
Sbjct: 231 EQGYAAAQYNLG 242
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G+GVR++ +A + + A +G A + G+MY D A+ YRQA
Sbjct: 98 GLMYDNGQGVRQDYAEAFRWYRQAAEQGHAEAQYNLGVMYDNGDGVRQDYAEALKWYRQA 157
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
G A+ + EA++ QA+ G+ AQ+ L GRGV
Sbjct: 158 VEQGVAQAKNNLGVMYAKGRGVRKDDAEALRWYRQAAEQGYAEAQFNLGAMYATGRGVRQ 217
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA +W+ +AAE GY A YN Y+ G G+ + +A +W ++AA+ G+ AQ
Sbjct: 218 DYTEAGKWFRQAAEQGYAAAQYNLGAMYATGYGVSQNDAEAIRWYRQAAEQGYAAAQYNL 277
Query: 271 GLGLFT 276
G FT
Sbjct: 278 GAMYFT 283
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G GVR++ +AL + + +G A + G+MY + + K +A A+ YRQA
Sbjct: 134 GVMYDNGDGVRQDYAEALKWYRQAVEQGVAQAKNNLGVMYAKGRGVRKDDAEALRWYRQA 193
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + EA K QA+ G+ AQY L G GV
Sbjct: 194 AEQGYAEAQFNLGAMYATGRGVRQDYTEAGKWFRQAAEQGYAAAQYNLGAMYATGYGVSQ 253
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N EA RWY +AAE GY A YN Y G G+ +++W +A D G
Sbjct: 254 NDAEAIRWYRQAAEQGYAAAQYNLGAMYFTGRGVRQDLHLSKEWFGKACDGG 305
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK QA+ G AQ+ L L G+GV + EA RWY +AAE G+ A YN +
Sbjct: 77 EAVKWYRQAAEQGVAEAQFSLGLMYDNGQGVRQDYAEAFRWYRQAAEQGHAEAQYNLGVM 136
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
Y G+G+ + +A KW ++A + G AQ ++ LG+
Sbjct: 137 YDNGDGVRQDYAEALKWYRQAVE--QGVAQAKNNLGV 171
>gi|296112632|ref|YP_003626570.1| hypothetical protein MCR_0405 [Moraxella catarrhalis RH4]
gi|295920326|gb|ADG60677.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
BBH18]
Length = 302
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G+GVR++ K+++ + K A +G A + LMY + D A + +A
Sbjct: 79 GVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKA 138
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + + +AV+ +A+ G+ AQ+ LAL + G+GV
Sbjct: 139 ANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQ 198
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ QEA WY +AA G+ A YN + Y G+G+ + +A +W +AA+ G +AQ
Sbjct: 199 DDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNL 258
Query: 271 GLGLFTEGEMMK 282
G+ ++ EG+ ++
Sbjct: 259 GV-MYDEGQGVR 269
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
+ G GVR++ KA + F K A +G A G+MY D+ + A+ Y +A
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY---DEGQGVRQDYYKAVEWYTKA 174
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +EAV+ +A+ GH AQY L + + G+GV
Sbjct: 175 ANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQ 234
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A W+ +AA G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 235 DYHKAVEWFTKAANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 286
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQ- 172
+ N KA + + K A +G A + G+MY+E ++ Y +AA G AQ
Sbjct: 53 QGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQF 112
Query: 173 ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+ +A + +A+ G AQ+ L + G+GV + +A WY
Sbjct: 113 NLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMYDEGQGVRQDYYKAVEWYT 172
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA GY A +N +L Y G+G+ ++A +W +AA GH +AQ G+ ++ EG+
Sbjct: 173 KAANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEAQYNLGV-MYYEGQG 231
Query: 281 MK 282
++
Sbjct: 232 VR 233
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
L D Q N +A + +A+ G AQ+ L + + G+GV + ++ WY +AA+
Sbjct: 46 LADEYYQQGNHAKAFEWYTKAANQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQ 105
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ EG+ ++
Sbjct: 106 GYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYDEGQGVRQDY 164
Query: 286 Y--LELATRA 293
Y +E T+A
Sbjct: 165 YKAVEWYTKA 174
>gi|189501859|ref|YP_001957576.1| hypothetical protein Aasi_0432 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497300|gb|ACE05847.1| hypothetical protein Aasi_0432 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1002
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 32/233 (13%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G+ +++GR +K+ A + K A +G+ +A + A S+Y +A
Sbjct: 747 RLGRIYENGRVAKKDEQTAAQWYEKAAIQGNRVA-------------QYALCSMYERAVR 793
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G P Q + N +EAV+ +A+ G+ AQYQL +G+ N
Sbjct: 794 QGCPKVQYSLGKMYYNGWGVDKNYQEAVEWYQKAANQGYAEAQYQLGYMYEYPKGLLQNY 853
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+EAA+WY AA+ G + A + +G G+ ++A +W ++AA+ GH AQL G+
Sbjct: 854 KEAAKWYQAAAKQGIITAQVKLADMSYYGLGVDKDEQEAFRWFQKAANQGHAAAQLVLGV 913
Query: 273 GLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
++ G + +KAV ++E A G+ A V ++ ++D V
Sbjct: 914 -MYVNGRGVTKDDVKAVEWIEKAVNQGDAEAQLVLGIMYANGRGVNKDEEQAV 965
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK------KEAAISLYR 161
GK + +G GV KN +A++ + K A +G A G MY E K KEAA Y+
Sbjct: 804 GKMYYNGWGVDKNYQEAVEWYQKAANQGYAEAQYQLGYMY-EYPKGLLQNYKEAA-KWYQ 861
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA G AQ + +EA + +A+ GH AQ L + GRGV
Sbjct: 862 AAAKQGIITAQVKLADMSYYGLGVDKDEQEAFRWFQKAANQGHAAAQLVLGVMYVNGRGV 921
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ +A W +A G A + Y+ G G+ QA W ++AAD G AQ
Sbjct: 922 TKDDVKAVEWIEKAVNQGDAEAQLVLGIMYANGRGVNKDEEQAVAWYQKAADQGSAVAQ 980
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG-------- 226
N E+A+ +A H AQY+L GR + Q AA+WY +AA G
Sbjct: 725 NWEKAILWYQRAGNQNHTEAQYRLGRIYENGRVAKKDEQTAAQWYEKAAIQGNRVAQYAL 784
Query: 227 ---YVRAM--------YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
Y RA+ Y+ Y G G+ ++++A +W ++AA+ G+ +AQ + G
Sbjct: 785 CSMYERAVRQGCPKVQYSLGKMYYNGWGVDKNYQEAVEWYQKAANQGYAEAQYQLG 840
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEM--DKKE-AAISLYRQA 163
G +++ +G+ +N +A + A +G A V A + Y+ + DK E A +++A
Sbjct: 840 GYMYEYPKGLLQNYKEAAKWYQAAAKQGIITAQVKLADMSYYGLGVDKDEQEAFRWFQKA 899
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AAQ + +AV+ + +A G AQ L + GRGV+
Sbjct: 900 ANQGHAAAQLVLGVMYVNGRGVTKDDVKAVEWIEKAVNQGDAEAQLVLGIMYANGRGVNK 959
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+ ++A WY +AA+ G A Y Y G G+
Sbjct: 960 DEEQAVAWYQKAADQGSAVAQYMLEQRYENGRGV 993
>gi|116750572|ref|YP_847259.1| Sel1 domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116699636|gb|ABK18824.1| Sel1 domain protein repeat-containing protein [Syntrophobacter
fumaroxidans MPOB]
Length = 255
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G++++ +A + F K A +G+ LA G MY+ LG
Sbjct: 67 GSMYLLGNGIQQDQSQAAEWFRKSAEQGNALAQTSLGAMYY-----------------LG 109
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + +A + +A+ G AQY L G GV+ + +A +W+ +AAE G
Sbjct: 110 QGV--PGDHGQAAEWYRKAAEQGEASAQYNLGNLYLLGHGVEKDEAQAMQWFRKAAEQGM 167
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 283
V A +N + Y+ G GLP R+A KW ++AA+ G AQ + GL G E + +A
Sbjct: 168 VLAQFNLAGGYAEGRGLPRDDREAAKWCRKAAEQGDVTAQYQLGLMYEAGRGVEKDRREA 227
Query: 284 VVYLELATRAG 294
+ +L A R G
Sbjct: 228 ISWLTSAARKG 238
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
PA + E V+ L + G AQ+ L G G+ + +AA W+ ++AE G A
Sbjct: 44 PAVSAERVRSL---ADQGDRDAQFTLGSMYLLGNGIQQDQSQAAEWFRKSAEQGNALAQT 100
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLE 288
+ Y G+G+P H QA +W ++AA+ G AQ G LG E + +A+ +
Sbjct: 101 SLGAMYYLGQGVPGDHGQAAEWYRKAAEQGEASAQYNLGNLYLLGHGVEKDEAQAMQWFR 160
Query: 289 LATRAG 294
A G
Sbjct: 161 KAAEQG 166
>gi|301618001|ref|XP_002938416.1| PREDICTED: protein sel-1 homolog 1 [Xenopus (Silurana) tropicalis]
Length = 822
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A + F + A G++ AM G MY E + E A+ +R+AA +G+
Sbjct: 407 GRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDTVIQSNETALQYFRKAADMGN 466
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q P + + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 467 PVGQSGLGMAYLYGRGVPVDYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKKDYKQA 526
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN ++ G G+ S A + K + G +L +
Sbjct: 527 LKYFNLASQGGHILAFYNLGQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMIAYNSY 586
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSA 311
G A V YL LA + E A + ++ QQ +A
Sbjct: 587 KNGNANTAAVQYLLLAEQGYEVAQSNAAFILDQQEAA 623
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 282 GFLYASGLGLNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 341
Query: 164 AV------------------LGDPAAQPANA----EEAVKLLYQ-ASIAGHVRAQYQLA- 199
A L D P A EE + YQ + G V+AQ L
Sbjct: 342 ANHVASDISLTGGTVVQRIRLADEVENPGMASGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 401
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL-SHRQARKWMKRA 258
L LH GRGV+ N Q A ++ +AA G AM YS G + S+ A ++ ++A
Sbjct: 402 LHLHGGRGVEQNHQRAFEYFNQAANAGNSHAMAFLGKMYSEGSDTVIQSNETALQYFRKA 461
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 462 ADMGNPVGQ--SGLGM 475
>gi|149191236|ref|ZP_01869492.1| Sel1-like repeat [Vibrio shilonii AK1]
gi|148834906|gb|EDL51887.1| Sel1-like repeat [Vibrio shilonii AK1]
Length = 259
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ G GV++N KA++ + K A +GS AM G+MY D KEAA S + +
Sbjct: 50 GDRYADGNGVKENDAKAVEWYHKAAKQGSESAMYKLGMMYDNGHGVNYDAKEAA-SWFEK 108
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A+ G AQ P + +AV+ A+ AQ L + +G GV+
Sbjct: 109 ASQKGSVQAQYYLAGMYKWGRGVPKSNSKAVEYYQLAAERNFDVAQNSLGVMYAKGLGVE 168
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-L 268
+ EA +WY +AAE GY N + YS GEG+ L++ +A W A+ G+ A+ L
Sbjct: 169 RDDLEAVKWYRKAAENGYAYGQRNLAYKYSLGEGVELNNVEAYAWASVASTNGYATAEKL 228
Query: 269 EHGLGLFTEGEMM-----KAVVYLE 288
L L + + KA +YLE
Sbjct: 229 RDDLALKLNADELQQAQQKAKLYLE 253
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 143 AGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIA 189
AG + + D A++ Q A GD AQ N +AV+ ++A+
Sbjct: 17 AGSLAFVKDWSTASVKKVEQGAKQGDLFAQIELGDRYADGNGVKENDAKAVEWYHKAAKQ 76
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G A Y+L + G GV+++ +EAA W+ +A++ G V+A Y + Y +G G+P S+
Sbjct: 77 GSESAMYKLGMMYDNGHGVNYDAKEAASWFEKASQKGSVQAQYYLAGMYKWGRGVPKSNS 136
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
+A ++ + AA+ AQ G+ GL E + ++AV + A G
Sbjct: 137 KAVEYYQLAAERNFDVAQNSLGVMYAKGLGVERDDLEAVKWYRKAAENG 185
>gi|433006100|ref|ZP_20194527.1| hypothetical protein A17S_03681 [Escherichia coli KTE227]
gi|433154718|ref|ZP_20339655.1| hypothetical protein WKS_02648 [Escherichia coli KTE176]
gi|431513158|gb|ELH91243.1| hypothetical protein A17S_03681 [Escherichia coli KTE227]
gi|431672978|gb|ELJ39210.1| hypothetical protein WKS_02648 [Escherichia coli KTE176]
Length = 375
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 88 CKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
KSW + +++ +A LL G+ + G GV ++ +A + K AA+ A V+ +
Sbjct: 101 AKSWYEKASVQNDVDAQFLL--GEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAV 158
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAA--QPANAEEAVKLLY------------------Q 185
+Y K YRQA + AA ++A+ A+ +LY +
Sbjct: 159 LY---AKGNGVEQDYRQAKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKGWYEK 215
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ AQ+ L + ++G GV N Q+A W+ +AA + A YN Y +G+G+
Sbjct: 216 AAEQNFANAQFNLGMLYYKGEGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVT 275
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
S+R+A++W ++AA GH AQ G+ ++ GE
Sbjct: 276 QSYRKAKEWFEKAAGEGHVDAQYNLGV-IYENGE 308
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 32/237 (13%)
Query: 68 VLNKIAASFTLPQLRAASL-------VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKN 120
V N + A F L ++ L K W + + + + G GV ++
Sbjct: 110 VQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAVLYAKGNGVEQD 169
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP--ANAEE 178
+A + K AA+ S+ A G++Y + E Y+QA + AA+ ANA+
Sbjct: 170 YRQAKSWYEKAAAQNSSDAQFALGILYANANGVE---QDYQQAKGWYEKAAEQNFANAQF 226
Query: 179 AVKLLY------------------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+ +LY +A+ + AQY L + G+GV + ++A W+
Sbjct: 227 NLGMLYYKGEGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVTQSYRKAKEWFE 286
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+AA G+V A YN + Y GEG+ QAR W ++AA +AQ + LG+ E
Sbjct: 287 KAAGEGHVDAQYNLGVIYENGEGVGQDFHQARAWYEKAAARNDAQAQFD--LGVMNE 341
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQP--- 173
D L G A GLMY ++D ++A I Y +AA DP AQ
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAAAQNDPRAQVKLG 85
Query: 174 ---ANA-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
AN ++A +AS+ V AQ+ L G GV + Q+A WY +AA
Sbjct: 86 LMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAA 145
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSSDAQFALGI 194
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 19/176 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV +N +A + F K A++ A + G +Y
Sbjct: 209 AKGWYEKAAEQNFANAQFNLGMLYYKGEGVSQNFQQAREWFEKAASQNQLNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YR+A + AA GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRKAKEWFEKAAGE----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
V + +A WY +AA +A ++ + G+G ++ +QAR W A G+
Sbjct: 310 VGQDFHQARAWYEKAAARNDAQAQFDLGVMNELGQGGSINLKQARTWFGLACKNGN 365
>gi|416155954|ref|ZP_11604247.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
101P30B1]
gi|416220293|ref|ZP_11625385.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
103P14B1]
gi|416249994|ref|ZP_11637003.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
CO72]
gi|326566881|gb|EGE17020.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
103P14B1]
gi|326575117|gb|EGE25045.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
CO72]
gi|326576797|gb|EGE26704.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
101P30B1]
Length = 302
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 20/175 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GVR++ KA + F K A +G A G+MY D+ + Y
Sbjct: 118 YAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY---DEGQGVRQDYY--------- 165
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+AV+ +A+ G+ AQ+ LAL + G+GV + QEA WY +AA G+ A
Sbjct: 166 -------KAVEWYTKAANQGYAGAQFNLALMYYEGQGVRQDDQEAVEWYTKAAGQGHAEA 218
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
YN + Y G+G+ + +A +W +AA+ G +AQ G+ ++ EG+ ++ +
Sbjct: 219 QYNLGVMYYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNLGV-MYDEGQGVRQNI 272
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
A + L EA L G + G+GVR++ KA++ + K A +G A + LMY+E
Sbjct: 139 ANQGLAEAQFSL--GVMYDEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLALMYYE---- 192
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G Q + +EAV+ +A+ GH AQY L + + G+GV +
Sbjct: 193 -------------GQGVRQ--DDQEAVEWYTKAAGQGHAEAQYNLGVMYYEGQGVRQDYH 237
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+A W+ +AA G+ +A N + Y G+G+ + A+ + +A D G
Sbjct: 238 KAVEWFTKAANQGFAQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 286
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q N +A + +A+ G +AQY L + +G GV + +A WY +AA+ GY A
Sbjct: 52 QQGNHAKAFEWFTKAAHQGDAQAQYNLGVMHAQGLGVRQDYHKAFEWYTKAAKQGYADAQ 111
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY--LEL 289
+N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ EG+ ++ Y +E
Sbjct: 112 FNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYDEGQGVRQDYYKAVEW 170
Query: 290 ATRA 293
T+A
Sbjct: 171 YTKA 174
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP-------------ANAEE 178
A G +A D Y++ A + +AA GD AQ + +
Sbjct: 35 AQSGDAVAQFDLAREYYQQGNHAKAFEWFTKAAHQGDAQAQYNLGVMHAQGLGVRQDYHK 94
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A + +A+ G+ AQ+ LAL +G GV + +A W+ +AA G A ++ + Y
Sbjct: 95 AFEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVMY 154
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
G+G+ + +A +W +AA+ G+ AQ L ++ EG+ ++
Sbjct: 155 DEGQGVRQDYYKAVEWYTKAANQGYAGAQFNLAL-MYYEGQGVR 197
>gi|417404664|gb|JAA49074.1| Putative extracellular protein sel-1 [Desmodus rotundus]
Length = 794
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHNAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
EG+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KEGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
+ ++A+K AS GH+ A Y LA G GV + A + E G
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHNAVELFKNVCERG 553
>gi|237746260|ref|ZP_04576740.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377611|gb|EEO27702.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 376
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +G GV K+L KA + + + AA+G+T A + G+MY D
Sbjct: 102 YDNGFGVEKDLKKAFELYSQSAAQGTTAAQFNLGMMY-------------------RDGQ 142
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A +L A+ G++RAQ LA+ +G+G+ + +A WY ++AE GY A
Sbjct: 143 GVKKDYVKAFELFSLAADRGNIRAQNALAVLYTQGKGIQRDYAKALYWYRKSAEKGYDEA 202
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ + Y GEG+P + +A KW K+AA G+ ++
Sbjct: 203 QHAMGVVYQKGEGVPANRDEAIKWYKKAAAQGYARS 238
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA +++ + + G AQY L +G GV + ++A WY ++ E G +A N ++
Sbjct: 42 EAFQIIKKEAKTGDAEAQYYLGKMYRKGEGVQQDNRQAVYWYTKSVEQGNRKAQNNLAVM 101
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y G G+ ++A + ++A G AQ G+ G + + +KA LA
Sbjct: 102 YDNGFGVEKDLKKAFELYSQSAAQGTTAAQFNLGMMYRDGQGVKKDYVKAFELFSLAADR 161
Query: 294 GETAADHVKNVILQQLSATSRDRA 317
G A + V+ Q RD A
Sbjct: 162 GNIRAQNALAVLYTQGKGIQRDYA 185
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 58/222 (26%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G ++ G+GV+K+ KA + F A RG+ A ++Y + + A+ YR++
Sbjct: 135 GMMYRDGQGVKKDYVKAFELFSLAADRGNIRAQNALAVLYTQGKGIQRDYAKALYWYRKS 194
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ PAN +EA+K +A+ G+ R+ L + D
Sbjct: 195 AEKGYDEAQHAMGVVYQKGEGVPANRDEAIKWYKKAAAQGYARSMANLGSLYYPEDAGDL 254
Query: 211 -NLQEAARWY--------------------------------------LRAAEGGYVRAM 231
+ EA +WY AAE G
Sbjct: 255 ESWDEAYKWYSMAIDHGDRKNAPLGLGLIHLFGSGRYPVDNAKAYSLFTLAAENGRADGW 314
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--LEHG 271
Y + +G G P + +A + KRAA+ G A LEHG
Sbjct: 315 YWLGVMEEYGFGRPQNEERAMELYKRAANAGVEPAINCLEHG 356
>gi|407781184|ref|ZP_11128404.1| peptidoglycan-binding domain-containing protein [Oceanibaculum
indicum P24]
gi|407208610|gb|EKE78528.1| peptidoglycan-binding domain-containing protein [Oceanibaculum
indicum P24]
Length = 675
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L Q A GDP AQ P + EA +A+I G AQY L + +G
Sbjct: 398 LVEQRARQGDPEAQHDLAVLYATGDGRPQDMREAAYWFREAAIQGVPGAQYNLGVLYEKG 457
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + A WY AAE + RA YN L Y+ G G+P+++ +ARKW++RA+D G
Sbjct: 458 TGVQQDDVRALLWYHSAAERNHPRAQYNLGLFYAQGRGIPVNYAEARKWLRRASDQGMTP 517
Query: 266 AQLEHG 271
A E G
Sbjct: 518 ALFELG 523
>gi|167628951|ref|YP_001679450.1| hypothetical protein HM1_1135 [Heliobacterium modesticaldum Ice1]
gi|167591691|gb|ABZ83439.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 232
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+A+E +K L QA+ G RAQ L + G G+ N +EA +W+ +AAE GY + Y+
Sbjct: 90 DADEGLKWLLQAAERGDARAQNNLGVLYFTGNGLPANGEEAVKWFRKAAEQGYDKGQYHL 149
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLE 288
Y G G+PL ++A KWM+ AA+ G+ Q+ E+G+G TE ++ +A + E
Sbjct: 150 GYAYLNGVGVPLDAKEALKWMQLAAEQGNKDGQIALALMYENGVG--TEKKLDQARAWYE 207
Query: 289 LATRAGETAA 298
A G+ A
Sbjct: 208 RAAAQGDKGA 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A P N EE L + G AQY+L L G GV + E +W L+AAE G R
Sbjct: 53 ATAPVNVEE----LRNEAQKGDTSAQYKLGTVLISGDGVTKDADEGLKWLLQAAERGDAR 108
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVV 285
A N + Y G GLP + +A KW ++AA+ G+ K Q G G+ + +A+
Sbjct: 109 AQNNLGVLYFTGNGLPANGEEAVKWFRKAAEQGYDKGQYHLGYAYLNGVGVPLDAKEALK 168
Query: 286 YLELATRAG 294
+++LA G
Sbjct: 169 WMQLAAEQG 177
>gi|323455533|gb|EGB11401.1| hypothetical protein AURANDRAFT_20899, partial [Aureococcus
anophagefferens]
Length = 272
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ G+G +L KA F + AA+G A+ +Y + +DKK+A LYR AA
Sbjct: 93 YRDGQGTEVDLGKARYWFERAAAKGDEDAIAHLAELYEDGSGVKLDKKKAE-QLYRAAAD 151
Query: 166 LGDPAAQ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
GD AQ EEA + A+ G+ + L C G G + +EAA
Sbjct: 152 RGDAVAQNNLGLFLDSEEKFEEAFRYFVLAANQGYTSGETNLGCCCRDGDGTEQRFEEAA 211
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
R+Y AA G YN CY GEG + +AR W +RAA G+ KA
Sbjct: 212 RYYALAANQGCTDGEYNLGWCYQHGEGTEVDLGKARYWYERAAAKGNEKA 261
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ---------PANAEEAV 180
G +AM + G +Y + +DKK+AA L+R A GD AQ EEAV
Sbjct: 13 GDVVAMTNLGTLYQKGLGVKLDKKKAA-RLFRMGADRGDAIAQNNLGASLHSEKKFEEAV 71
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
+ A+ G+ + L +C G+G + +L +A W+ RAA G A+ + + Y
Sbjct: 72 RYFVLAANQGYTSGEGCLGVCYRDGQGTEVDLGKARYWFERAAAKGDEDAIAHLAELYED 131
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
G G+ L ++A + + AAD G AQ GL L +E + +A Y LA G T+ +
Sbjct: 132 GSGVKLDKKKAEQLYRAAADRGDAVAQNNLGLFLDSEEKFEEAFRYFVLAANQGYTSGE 190
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 13/136 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG--- 167
++ G GV+ + KA + A RG +A + GL +K E A + AA G
Sbjct: 129 YEDGSGVKLDKKKAEQLYRAAADRGDAVAQNNLGLFLDSEEKFEEAFRYFVLAANQGYTS 188
Query: 168 ----------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
D EEA + A+ G +Y L C G G + +L +A
Sbjct: 189 GETNLGCCCRDGDGTEQRFEEAARYYALAANQGCTDGEYNLGWCYQHGEGTEVDLGKARY 248
Query: 218 WYLRAAEGGYVRAMYN 233
WY RAA G +A++N
Sbjct: 249 WYERAAAKGNEKAIHN 264
>gi|422805784|ref|ZP_16854216.1| Sel1 [Escherichia fergusonii B253]
gi|424816061|ref|ZP_18241212.1| hypothetical protein ECD227_1178 [Escherichia fergusonii ECD227]
gi|324113509|gb|EGC07484.1| Sel1 [Escherichia fergusonii B253]
gi|325497081|gb|EGC94940.1| hypothetical protein ECD227_1178 [Escherichia fergusonii ECD227]
Length = 644
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ GRG+ KN+ +A L A G+T A + A IS +
Sbjct: 367 GIMYRDGRGMDKNISEARKWLLLAAQNGNTSAQYEI-----------ARISRF------- 408
Query: 168 DPAAQPA-NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
A +P N EEA++ A+ GH AQY+L +G GV+ + +A RW+L++AE G
Sbjct: 409 --AVEPLRNYEEALQWYLSAATQGHELAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQG 466
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y+ A Y+T+ Y + +P +A W +AA G G A E G T +
Sbjct: 467 YLHAQYHTARLYCESKSIPQDQEKALYWFTKAAKNGAGDAMYELGKYYLTNND 519
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 52/237 (21%)
Query: 66 FD--VLNKIAASFTLPQLRAASLVCK---SWNDALRPLREAMVLLRW--GKRF-----KH 113
FD VLNK+A F L A L+ + SW R+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIERLSYSW-------RKEKMIRKWKLTERFNNLAMQH 288
Query: 114 GRGVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR 161
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 289 HSGYKKFLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGNMYYEGDEVSQDLKL-- 346
Query: 162 QAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
A +A+ + AQY L + GRG+D N+ EA +W L
Sbjct: 347 -----------------AFNWFTRAAQHNVIEAQYALGIMYRDGRGMDKNISEARKWLLL 389
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
AA+ G A Y + F ++ +A +W AA GH AQ E G ++ +G
Sbjct: 390 AAQNGNTSAQYEIARISRFAVEPLRNYEEALQWYLSAATQGHELAQYELG-QMYIQG 445
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHELAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAA-------------QPANAEEAV 180
A +Y E +E A+ + +AA G A P N EA+
Sbjct: 469 HAQYHTARLYCESKSIPQDQEKALYWFTKAAKNGAGDAMYELGKYYLTNNDDPENNAEAI 528
Query: 181 KLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ L A+ G + A + LA + L+ + + + A WY +AA G A ++T+ Y+
Sbjct: 529 QWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALNWYEKAARLGSSEAQHHTAAMYA 588
Query: 240 FGEGLPLSHRQARKWMKRAAD 260
G G + ++QA W+ A +
Sbjct: 589 QGTGTKIDNKQAWMWLTIAGN 609
>gi|290992478|ref|XP_002678861.1| predicted protein [Naegleria gruberi]
gi|284092475|gb|EFC46117.1| predicted protein [Naegleria gruberi]
Length = 522
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAI 157
+ L G ++ G GV K+ KA + F A G+ A + MY E A+
Sbjct: 258 ITLCNLGLMYRDGLGVSKSFGKARNLFKAAALLGNATAQNNLANMYENGQGGSLSLEKAV 317
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
YR++A G+ AQ + E+A K +++ G+V AQ LA
Sbjct: 318 KWYRESANQGNAVAQYNLALLYENGKVVAKSFEKAFKWYEKSASQGNVHAQNNLASLYES 377
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
GRG + ++A WYL+AA+ G+ A YN ++ Y +G+G S +A +W +++A
Sbjct: 378 GRGTKQSFKKAFEWYLKAAQQGHSEAQYNLAVMYEYGQGTEQSFGKAVQWYEKSASQCDA 437
Query: 265 KAQLEHGL 272
AQ GL
Sbjct: 438 DAQFNLGL 445
>gi|291522026|emb|CBK80319.1| Sel1 repeat [Coprococcus catus GD/7]
Length = 457
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GVR+N+ +A A G A + G Y Y Q V
Sbjct: 307 YDRGIGVRRNITEAAKWCQMAAFGGHAKAQSEIGYCYE-----------YGQGVV----- 350
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N +EAV AS G++ A+ LA C +GRGV +++EA R Y AA GG+ A
Sbjct: 351 ---RNIKEAVSWYEMASAQGNIEAKNNLAFCYQKGRGVHKDVKEAIRLYGEAAAGGHASA 407
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
YN CY +GEG+ +A + K++AD G+ KA
Sbjct: 408 QYNLGYCYWYGEGVKTDKSRAIELFKQSADNGNAKA 443
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ ++A K L QA+ GH AQYQL++C RG GV N+ EAA+W AA GG+ +A
Sbjct: 280 DGDKAFKCLRQAASQGHTEAQYQLSVCYDRGIGVRRNITEAAKWCQMAAFGGHAKAQSEI 339
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
CY +G+G+ + ++A W + A+ G+ +A+
Sbjct: 340 GYCYEYGQGVVRNIKEAVSWYEMASAQGNIEAK 372
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 19/168 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G R R++ DKA + A++G T A + Y + I + R
Sbjct: 264 LFAEGMRILENGTTREDGDKAFKCLRQAASQGHTEAQYQLSVCY------DRGIGVRR-- 315
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
N EA K A+ GH +AQ ++ C G+GV N++EA WY A+
Sbjct: 316 -----------NITEAAKWCQMAAFGGHAKAQSEIGYCYEYGQGVVRNIKEAVSWYEMAS 364
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
G + A N + CY G G+ ++A + AA GH AQ G
Sbjct: 365 AQGNIEAKNNLAFCYQKGRGVHKDVKEAIRLYGEAAAGGHASAQYNLG 412
>gi|421695865|ref|ZP_16135462.1| Sel1 repeat protein [Acinetobacter baumannii WC-692]
gi|404564101|gb|EKA69292.1| Sel1 repeat protein [Acinetobacter baumannii WC-692]
Length = 285
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAIS--LYRQAAVLGD-P 169
+ ++ ++ KA++ + A +G A + GL+Y E K + A + Y +AA+ GD P
Sbjct: 73 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEHIKPDYAKAKYWYEKAALQGDIP 132
Query: 170 AAQP------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ + ++A+K A+ AG AQ L GRGV N +EA++
Sbjct: 133 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHGRGVTQNKEEASQ 192
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 193 WYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYSQAQKWFLAAANQGESNAQFHLGKIYKDG 252
Query: 274 LFTEGEMMKAVVYLELATRAGETAA 298
L + + A + E + AG + A
Sbjct: 253 LGVDKNLSLARTWFEKSAEAGNSYA 277
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G++++ KA+ +L A G + A + G M+ + G
Sbjct: 138 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMF-----------------LHG 180
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q N EEA + +A+I G + AQY L L G G+ + +A +W+L AA G
Sbjct: 181 RGVTQ--NKEEASQWYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYSQAQKWFLAAANQGE 238
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
A ++ Y G G+ + AR W +++A+ G+ A E
Sbjct: 239 SNAQFHLGKIYKDGLGVDKNLSLARTWFEKSAEAGNSYAAQE 280
>gi|168333374|ref|ZP_02691654.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 249
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L + G + G V KN+ KA F K A RG +AM + G Y+
Sbjct: 106 LCKLGSWYYTGEVVEKNMVKAYKYFKKAAERGDYIAMCNLGTCYY--------------- 150
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
G+ + NA +AV+ +++ G+ RAQY L C G+G++ +L +A WY +AA
Sbjct: 151 --FGNGIEK--NATKAVEWYKKSAKLGNARAQYSLGNCYELGKGIEVDLVKAFEWYKKAA 206
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
E G ++A + CY+ G G + A KW K+++
Sbjct: 207 EQGNIKAQASVGACYANGFGTEKNMELAAKWFKKSS 242
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G + G GV KN KA++ ++K A G + + G+ Y + E +S+ Y QA
Sbjct: 38 GVCYSTGAGVAKNYTKAVEWYMKAVAAGDPVTQCNLGVCYEKGLGVEKDLSVAEKWYLQA 97
Query: 164 AVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G A N +A K +A+ G A L C + G G++
Sbjct: 98 AEQGHIEALCKLGSWYYTGEVVEKNMVKAYKYFKKAAERGDYIAMCNLGTCYYFGNGIEK 157
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N +A WY ++A+ G RA Y+ CY G+G+ + +A +W K+AA+ G+ KAQ
Sbjct: 158 NATKAVEWYKKSAKLGNARAQYSLGNCYELGKGIEVDLVKAFEWYKKAAEQGNIKAQASV 217
Query: 271 GL----GLFTEGEMMKAVVYLELATRA 293
G G TE M A + + ++RA
Sbjct: 218 GACYANGFGTEKNMELAAKWFKKSSRA 244
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH +AQ + +C G GV N +A WY++A G N +CY G G+
Sbjct: 29 GHCKAQCNVGVCYSTGAGVAKNYTKAVEWYMKAVAAGDPVTQCNLGVCYEKGLGVEKDLS 88
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAA 298
A KW +AA+ GH +A + G +T E M+KA Y + A G+ A
Sbjct: 89 VAEKWYLQAAEQGHIEALCKLGSWYYTGEVVEKNMVKAYKYFKKAAERGDYIA 141
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ +C G G+ +L +A RWY RAA+ G+ +A N +CYS G G+ ++ +A +W +
Sbjct: 1 MGICNVNGTGMSKSLYKAFRWYKRAADQGHCKAQCNVGVCYSTGAGVAKNYTKAVEWYMK 60
Query: 258 AADCGHGKAQL------EHGLGL 274
A G Q E GLG+
Sbjct: 61 AVAAGDPVTQCNLGVCYEKGLGV 83
>gi|167043547|gb|ABZ08243.1| putative MORN repeat protein [uncultured marine microorganism
HF4000_APKG2J17]
Length = 577
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A G +++G+GV ++ A+ + A +G A + GLMY + + +
Sbjct: 252 DASAQFNLGVMYENGQGVPQDDKTAVKWYTLAAKQGHAHAQTNLGLMYRKGQGVLQDYKT 311
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ +R AA GD AQ P N + AVK A+ G AQ L
Sbjct: 312 AVKWFRLAAEQGDARAQNNLGVMYKKGEGVPQNDKTAVKWYTLAAEQGLADAQSNLGQMY 371
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G+GV + + A +W+ AAE GY RA N Y G+G+P ++ A KW K AA+ G
Sbjct: 372 RKGQGVLQDYKTAVKWFRLAAEQGYARAQNNLGFMYRNGQGVPRDYKTAVKWFKLAAEQG 431
Query: 263 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
AQ G ++ GE + AV + LA G A +
Sbjct: 432 LADAQYNLGQ-MYRRGEGVPRDDKTAVKWYRLAAEQGGADAQY 473
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 23/233 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G GV +N A+ + A +G A + G MY + + + A+ +R A
Sbjct: 332 GVMYKKGEGVPQNDKTAVKWYTLAAEQGLADAQSNLGQMYRKGQGVLQDYKTAVKWFRLA 391
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ P + + AVK A+ G AQY L RG GV
Sbjct: 392 AEQGYARAQNNLGFMYRNGQGVPRDYKTAVKWFKLAAEQGLADAQYNLGQMYRRGEGVPR 451
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + A +WY AAE G A YN Y +G G+P + + A KW + AA+ G + Q
Sbjct: 452 DDKTAVKWYRLAAEQGGADAQYNLGAMYEYGFGVPQNDKTAVKWYRLAAEQGDARTQSNL 511
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
GL ++ EG + ++A ++ +A G+ A ++ + + ++ +A
Sbjct: 512 GL-MYHEGKGVVQDYVRAHMWWSIAASQGDKDATKNRDTVAKDMTPADLSKAQ 563
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+K LD AL+ F A +G A + G+MY E + P + +
Sbjct: 234 QKGLDAALEEFRLLAKQGDASAQFNLGVMY------ENGQGV-------------PQDDK 274
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
AVK A+ GH AQ L L +G+GV + + A +W+ AAE G RA N +
Sbjct: 275 TAVKWYTLAAKQGHAHAQTNLGLMYRKGQGVLQDYKTAVKWFRLAAEQGDARAQNNLGVM 334
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 292
Y GEG+P + + A KW AA+ G AQ G ++ +G+ + AV + LA
Sbjct: 335 YKKGEGVPQNDKTAVKWYTLAAEQGLADAQSNLGQ-MYRKGQGVLQDYKTAVKWFRLAAE 393
Query: 293 AGETAADHVKNVILQQLSATSRDRAMLV 320
G A + + + RD V
Sbjct: 394 QGYARAQNNLGFMYRNGQGVPRDYKTAV 421
>gi|239503112|ref|ZP_04662422.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii AB900]
gi|421679060|ref|ZP_16118940.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
gi|410391751|gb|EKP44117.1| Sel1 repeat protein [Acinetobacter baumannii OIFC111]
Length = 230
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K++ +A + F K A +G A + G++Y D+ G
Sbjct: 83 GMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLY---DR--------------G 125
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AQ N E+A + +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 126 EGTAQ--NYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVSQSNEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN + Y GEG P + + A+KW ++AAD G A+
Sbjct: 184 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAK 223
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY+ E
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEK------------------- 94
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ + A + +A+ GH +AQY L + RG G N ++A WY RAAE GY A YN
Sbjct: 95 DMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S+ QA KW +AA+ H ++ ++ L ++ GE L+LA +
Sbjct: 155 AHLYKKGHGVSQSNEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKW 210
Query: 294 GETAAD 299
+ AAD
Sbjct: 211 FQQAAD 216
>gi|340363637|ref|ZP_08685960.1| Sel1 repeat superfamily protein [Neisseria macacae ATCC 33926]
gi|339885316|gb|EGQ75045.1| Sel1 repeat superfamily protein [Neisseria macacae ATCC 33926]
Length = 267
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGVR++ KA+ + K A +G A + G+ Y E D +A + YR+
Sbjct: 48 GLMYDSGRGVRQDYTKAVQWYRKAAEQGVAEAQFNLGVAYAEGKGVRQDYAQA-VQWYRK 106
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A G AQ + +A + +A+ GH AQY L + +G GV
Sbjct: 107 VAEQGYSEAQLNLGMMYDKGQGVRQDHAQAAQWYRKAAEQGHAVAQYNLGVAYKKGEGVR 166
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A +WY +AAE G +A N + Y G+G+ + +A W ++AA+ G +AQ
Sbjct: 167 QDDKQAVQWYRKAAEQGLAQAQSNLGVMYGKGQGVRQDYAKAVSWYRKAAEQGQAEAQYN 226
Query: 270 HGLGLFTEGE 279
G+ ++ EG+
Sbjct: 227 LGV-MYEEGQ 235
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 23/175 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLY 160
G + G+GVR++ +A+ + K A +G + A ++ G+MY DK + A Y
Sbjct: 84 GVAYAEGKGVRQDYAQAVQWYRKVAEQGYSEAQLNLGMMY---DKGQGVRQDHAQAAQWY 140
Query: 161 RQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA G AQ + ++AV+ +A+ G +AQ L + +G+G
Sbjct: 141 RKAAEQGHAVAQYNLGVAYKKGEGVRQDDKQAVQWYRKAAEQGLAQAQSNLGVMYGKGQG 200
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V + +A WY +AAE G A YN + Y G+G+ + + A++W K+A D G
Sbjct: 201 VRQDYAKAVSWYRKAAEQGQAEAQYNLGVMYEEGQGVSKNRKVAKEWYKKACDNG 255
>gi|300940986|ref|ZP_07155510.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
gi|300454310|gb|EFK17803.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
Length = 375
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 88 CKSWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
KSW + +++ +A LL G+ + G GV ++ +A + K AA+ A V+ +
Sbjct: 101 AKSWYEKASVQNDVDAQFLL--GEMYDDGLGVGQDYQQAKMWYEKAAAQNDERAQVNLAV 158
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAA--QPANAEEAVKLLY------------------Q 185
+Y K YRQA + AA ++A+ A+ +LY +
Sbjct: 159 LY---AKGNGVEQDYRQAKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKDWYEK 215
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ AQ+ L + ++G GV N Q+A W+ +AA + A YN Y +G+G+
Sbjct: 216 AAEQNFANAQFNLGMLYYKGDGVSQNFQQAREWFEKAASQNQLNAQYNLGQIYYYGQGVT 275
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
S+R+A++W ++AA GH AQ G+ ++ GE
Sbjct: 276 QSYRKAKEWFEKAAGEGHVDAQYNLGV-IYENGE 308
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
KSW + + G + + GV ++ +A D + K A + A + G++Y
Sbjct: 173 AKSWYEKAAAQNSSDAQFALGILYANANGVEQDYQQAKDWYEKAAEQNFANAQFNLGMLY 232
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ GD +Q N ++A + +A+ + AQY L + G+G
Sbjct: 233 YK-----------------GDGVSQ--NFQQAREWFEKAASQNQLNAQYNLGQIYYYGQG 273
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++A W+ +AA G+V A YN + Y GEG+ QAR W ++AA +AQ
Sbjct: 274 VTQSYRKAKEWFEKAAGEGHVDAQYNLGVIYENGEGVGQDFHQARAWYEKAAARNDAQAQ 333
Query: 268 LEHGLGLFTE 277
+ LG+ E
Sbjct: 334 FD--LGVMNE 341
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 19/176 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + A G + G GV +N +A + F K A++ A + G +Y
Sbjct: 209 AKDWYEKAAEQNFANAQFNLGMLYYKGDGVSQNFQQAREWFEKAASQNQLNAQYNLGQIY 268
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ + YR+A + AA GHV AQY L + G G
Sbjct: 269 Y---YGQGVTQSYRKAKEWFEKAAGE----------------GHVDAQYNLGVIYENGEG 309
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
V + +A WY +AA +A ++ + G+G ++ +QAR W A GH
Sbjct: 310 VGQDFHQARAWYEKAAARNDAQAQFDLGVMNELGQGGSINLKQARTWFGLACKNGH 365
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQP--- 173
D L G A GLMY ++D ++A I Y +AA DP AQ
Sbjct: 27 DSTLSRLKSAGENGDVEAQYALGLMYLYGEILDVDYQQAKI-WYEKAAAQNDPRAQVKLG 85
Query: 174 ---ANA-------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
AN ++A +AS+ V AQ+ L G GV + Q+A WY +AA
Sbjct: 86 LMYANGLGVNQDYQQAKSWYEKASVQNDVDAQFLLGEMYDDGLGVGQDYQQAKMWYEKAA 145
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
RA N ++ Y+ G G+ +RQA+ W ++AA AQ G+
Sbjct: 146 AQNDERAQVNLAVLYAKGNGVEQDYRQAKSWYEKAAAQNSSDAQFALGI 194
>gi|422007128|ref|ZP_16354114.1| hypothetical protein OOC_03252 [Providencia rettgeri Dmel1]
gi|414097018|gb|EKT58673.1| hypothetical protein OOC_03252 [Providencia rettgeri Dmel1]
Length = 267
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G+R+ G GV ++ A + F+K +G++ A G M+ + DK A+ Y
Sbjct: 57 GERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLGTMFVNGFGVRRDYDK---AMLWY 113
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
QAA GD RA+ +A+ +G GV NL++AA W+
Sbjct: 114 EQAAAQGD-----------------------TRAETNMAMMYAQGLGVTQNLEKAAFWFR 150
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-- 278
+AA+GG + A + YS G G+ L +A W ++AA K+Q G+ +++EG
Sbjct: 151 KAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWFRKAAKQKDAKSQDRLGV-MYSEGRG 209
Query: 279 ---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+ +A +L A +G + ++N I +QLS +A + + +
Sbjct: 210 VKKNLQQAYAWLATAVYSGNAESHRLQNKIAEQLSPEELQQAQKLAEGY 258
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G F +G GVR++ DKA+ + + AA+G T A + +MY A
Sbjct: 90 FRLGTMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMY---------------AQ 134
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG N E+A +A+ G++ AQ+Q+ G GVD + ++A W+ +AA+
Sbjct: 135 GLG----VTQNLEKAAFWFRKAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWFRKAAK 190
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
++ + YS G G+ + +QA W+ A G+ ++
Sbjct: 191 QKDAKSQDRLGVMYSEGRGVKKNLQQAYAWLATAVYSGNAES 232
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E +++ + Q + G +AQ+QL +G GV + + AA W+++A G A +
Sbjct: 35 EPSIEQITQLAQKGDPKAQFQLGERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLGT 94
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATR 292
+ G G+ + +A W ++AA G +A+ + + GL + KA + A +
Sbjct: 95 MFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMYAQGLGVTQNLEKAAFWFRKAAQ 154
Query: 293 AGETAA 298
G A
Sbjct: 155 GGNILA 160
>gi|237735854|ref|ZP_04566335.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229381599|gb|EEO31690.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 742
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 23/224 (10%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVR 193
E+ S YRQA+ D A A N +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 292
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 26/253 (10%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAA-------------QPANAEEAV 180
A + Y ++D E A+ YR A G P A + +A
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 295
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNPDKAFTYLQIAANQGY 620
Query: 296 TAADHVKNVILQQ 308
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGTAVDLTRAVNYYYQAAK 258
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG A + + E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 273 GLFTE 277
G F E
Sbjct: 377 GYFYE 381
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
++YR A L + N ++A L A+ G+ A + L G G NL E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNPDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
A ++YL + YV +YN + CY +G G + A K +A++ G+ A
Sbjct: 644 AFKYYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASF 697
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 28/187 (14%)
Query: 89 KSWNDALRPLR--EAMV-------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
+ ++D L+ ++ EA + + R G+ + KN DKA A +G A
Sbjct: 564 EQYHDDLKAIKYYEAAIDQNDVRAMYRMALYLDEGKVIAKNPDKAFTYLQIAANQGYGPA 623
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLA 199
M G+ E I Y+ N +EA K ++ +V Y LA
Sbjct: 624 MNMYGIY------LENGIGGYK-------------NLDEAFKYYLASTSDEYVPGIYNLA 664
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
C G G + A + +L+A+E GY A + YS+G+G+ ++A+++ K+AA
Sbjct: 665 RCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMYSYGDGINQDKQKAKEYFKQAA 724
Query: 260 DCGHGKA 266
+ G +A
Sbjct: 725 NKGMKEA 731
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + A+ G+V A LA G GV + Q+A Y A G+ RA+ N C
Sbjct: 176 QAFRYYQSATSLGNVVASCNLAYFYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYC 235
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG 278
Y +G G + +A + +AA G+ +A G L F EG
Sbjct: 236 YEYGHGTAVDLTRAVNYYYQAAKLGYSEALYSLGTCLEFGEG 277
>gi|429764401|ref|ZP_19296721.1| Sel1 repeat protein [Clostridium celatum DSM 1785]
gi|429188191|gb|EKY29080.1| Sel1 repeat protein [Clostridium celatum DSM 1785]
Length = 881
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L+ G+ + GRGV K+ KA + FL A + A GL Y E I++ R
Sbjct: 198 LVEAGENYYLGRGVSKSSKKAYECFLNAAKFKNEYAESYLGLFY------EKGIAVNR-- 249
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
N E A + Y+A+I G+ AQY L + G GV + +A W+ ++A
Sbjct: 250 -----------NYEIAFQWYYKAAIKGNAFAQYALGMLYFEGNGVIKDYYKAFLWFQKSA 298
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE---- 279
E YV A Y CY G G S +A KW ++AA+ AQ L ++ GE
Sbjct: 299 ENDYVEAFYQLGRCYYSGFGCEESKDKAFKWYQKAAEENFSAAQYALSL-MYKNGEGCDT 357
Query: 280 -MMKAVVYLELATRAGETAADHV 301
M+ A ++E + G A ++
Sbjct: 358 NMISAYYWIEKSAENGYEDAYYI 380
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G V +N + A + K A +G+ A G++Y+E + I Y +A +
Sbjct: 238 GLFYEKGIAVNRNYEIAFQWYYKAAIKGNAFAQYALGMLYFEGN---GVIKDYYKAFLWF 294
Query: 168 DPAAQPANAE--------------------EAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+A+ E +A K +A+ AQY L+L G G
Sbjct: 295 QKSAENDYVEAFYQLGRCYYSGFGCEESKDKAFKWYQKAAEENFSAAQYALSLMYKNGEG 354
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
D N+ A W ++AE GY A Y Y G + + +++A ++ + +
Sbjct: 355 CDTNMISAYYWIEKSAENGYEDAYYIIGKSYLEGIYVDVDYKKAFYYLNKGYE 407
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 20/177 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLY 160
R G + +G G+ +NLDKA++ + AM + Y +K E + L
Sbjct: 484 RLGIMYYNGEGLERNLDKAIEYMQIAVQKKEPHAMYVLAVAYLRTNKFGEKTTEISKELL 543
Query: 161 RQAAVLGDPAA---------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
++A L P A + N +E +K + G + +Q +G
Sbjct: 544 KRAFELKSPYAAESLASLMINELKEGKEINNDELIKYIRFGVENGLENSIFQYGYIYEKG 603
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GV +L+ A +Y AAE + A+ + Y G + A +W ++AAD G
Sbjct: 604 IGVPQDLETAYYYYNIAAEKNSINAIVKIADWYKKGIYFKCNIDLAIRWYEKAADMG 660
>gi|284113133|ref|ZP_06386590.1| Sel1 domain protein repeat-containing protein [Candidatus
Poribacteria sp. WGA-A3]
gi|283829686|gb|EFC34013.1| Sel1 domain protein repeat-containing protein [Candidatus
Poribacteria sp. WGA-A3]
Length = 323
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAA------ 156
G+ + GRGVR++ +A+ F + A +G LA + G MY D EAA
Sbjct: 101 GRMYADGRGVRQDNTEAVRWFRQAAEQGHDLAQAELGFMYLLEIAVPRDDIEAARWVRWV 160
Query: 157 ------ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ YR + + + EAV+ +A+ G+ RAQ+ L +G+GV
Sbjct: 161 AERGNDFAQYRLGVIYDEGKGVAQDYAEAVRWFSRAAEQGNARAQHALGKMHGQGKGVHQ 220
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ EA RW+ +AAE G A + L Y+ G G+P + QA KW+ AA
Sbjct: 221 DYAEAVRWHRQAAEQGLTVAQFMLGLMYADGRGMPQDYVQAHKWINLAA 269
>gi|302878784|ref|YP_003847348.1| sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302581573|gb|ADL55584.1| Sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
Length = 377
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA K + A+ GHV A Y LA+ G+GV + AA+WY R+AEGG+V A N +
Sbjct: 69 EAAKWMQLAAEQGHVLAAYNLAMMYSSGQGVAVDYAAAAKWYQRSAEGGFVLAQLNLGVA 128
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y+ GEG+ + +A KW + AA+ +AQ G+ ++ G+
Sbjct: 129 YANGEGVQKNDTEAVKWFRLAAEQNDAQAQFNLGV-MYANGQ 169
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ+ L+ +G+ V+ + EAA+W AAE G+V A YN ++ YS G+G+ + + A
Sbjct: 48 EAQFNLSSLYFKGQQVEQDYVEAAKWMQLAAEQGHVLAAYNLAMMYSSGQGVAVDYAAAA 107
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQ 307
KW +R+A+ G AQL G+ + GE ++ AV + LA + A V+
Sbjct: 108 KWYQRSAEGGFVLAQLNLGVA-YANGEGVQKNDTEAVKWFRLAAEQNDAQAQFNLGVMY- 165
Query: 308 QLSATSRDRAMLVVDSWR 325
A + A +++S+R
Sbjct: 166 ---ANGQGTAQNLIESYR 180
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G V AQ L + G GV N EA +W+ AAE +A +N + Y+ G+G +
Sbjct: 117 GFVLAQLNLGVAYANGEGVQKNDTEAVKWFRLAAEQNDAQAQFNLGVMYANGQGTAQNLI 176
Query: 250 QARKWMKRAADCGHGKA 266
++ + K AA GH A
Sbjct: 177 ESYRLSKLAAAQGHETA 193
>gi|340622035|ref|YP_004740487.1| hypothetical protein Ccan_12640 [Capnocytophaga canimorsus Cc5]
gi|339902301|gb|AEK23380.1| Uncharacterized protein ybeQ [Capnocytophaga canimorsus Cc5]
Length = 760
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K +N+A++ ++A G+ + +G GV K+ D+A+ F K A +G+ +
Sbjct: 547 VSKDYNEAVKWYKKATEQGDASGQSNLGEMYYYGYGVPKDYDEAVKWFRKAAEQGNAVGQ 606
Query: 141 VDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKL 182
+ G+MY D EA + +R+AA G+ + Q + EAVK
Sbjct: 607 NNLGVMYRNGFGVSKDYNEA-VKWFRKAAEQGNASGQNNLGLMYRNGLGVSKDYNEAVKW 665
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A+ G+ Q L + G+GV + EA +WY +AAE G N Y +G
Sbjct: 666 YRKAAEQGYALGQNNLGTMYYNGQGVSKDYNEAVKWYRKAAEQGNAFGQNNLGDMYYYGY 725
Query: 243 GLPLSHRQARKWMKRAADCGH 263
G+P +A KW +++A G+
Sbjct: 726 GVPKDKAEAVKWYQKSARQGN 746
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + G G+ K+ ++A + + K A +G+T + G MY D EA + YR+
Sbjct: 394 GQAYYSGIGISKDYEQAANWYRKSAEQGNTSGQNNLGWMYQNGFGVSKDYYEA-VKWYRK 452
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ + Q P + +EAVK +A+ G+ Q L G GV
Sbjct: 453 AAEQGNTSGQNNLGEMYYYGYGVPKDYDEAVKWFRKAAEQGNASGQNNLGNMYRNGFGVS 512
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA WY +AAE G N Y +G G+ + +A KW K+A + G Q
Sbjct: 513 KDYYEAVEWYRKAAEQGKASGQSNLGEMYYYGYGVSKDYNEAVKWYKKATEQGDASGQSN 572
Query: 270 HG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G G + +AV + A G + V+ + S+D
Sbjct: 573 LGEMYYYGYGVPKDYDEAVKWFRKAAEQGNAVGQNNLGVMYRNGFGVSKD 622
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 21/198 (10%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQ----- 172
+KA + FL+ A +G + A D G Y+ E A + YR++A G+ + Q
Sbjct: 372 EKAFELFLESANKGHSGAQYDLGQAYYSGIGISKDYEQAANWYRKSAEQGNTSGQNNLGW 431
Query: 173 --------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+ EAVK +A+ G+ Q L + G GV + EA +W+ +AAE
Sbjct: 432 MYQNGFGVSKDYYEAVKWYRKAAEQGNTSGQNNLGEMYYYGYGVPKDYDEAVKWFRKAAE 491
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEM 280
G N Y G G+ + +A +W ++AA+ G Q G G +
Sbjct: 492 QGNASGQNNLGNMYRNGFGVSKDYYEAVEWYRKAAEQGKASGQSNLGEMYYYGYGVSKDY 551
Query: 281 MKAVVYLELATRAGETAA 298
+AV + + AT G+ +
Sbjct: 552 NEAVKWYKKATEQGDASG 569
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A +LY QA + + E+A +L +++ GH AQY L + G G+ + ++A
Sbjct: 355 AEALYEQAVL----HSHKNEHEKAFELFLESANKGHSGAQYDLGQAYYSGIGISKDYEQA 410
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A WY ++AE G N Y G G+ + +A KW ++AA+ G+ Q
Sbjct: 411 ANWYRKSAEQGNTSGQNNLGWMYQNGFGVSKDYYEAVKWYRKAAEQGNTSGQ 462
>gi|167757075|ref|ZP_02429202.1| hypothetical protein CLORAM_02624 [Clostridium ramosum DSM 1402]
gi|167703250|gb|EDS17829.1| Sel1 repeat protein [Clostridium ramosum DSM 1402]
Length = 742
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 23/224 (10%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVR 193
E+ S YRQA+ D A A N +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 292
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 26/253 (10%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAA-------------QPANAEEAV 180
A + Y ++D E A+ YR A G P A + +A
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 295
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNLDKAFTYLQIAANQGY 620
Query: 296 TAADHVKNVILQQ 308
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGTAVDLPRAVNYYYQAAK 258
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG A + + E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 273 GLFTE 277
G F E
Sbjct: 377 GYFYE 381
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
++YR A L + N ++A L A+ G+ A + L G G NL E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
A ++YL + YV +YN + CY +G G + A K +A++ G+ A
Sbjct: 644 AFKYYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASF 697
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 89 KSWNDALRPLR--EAMV-------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
+ ++D L+ ++ EA + + R G+ + KNLDKA A +G A
Sbjct: 564 EQYHDDLKAIKYYEAAIDQNDVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPA 623
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLA 199
M G+ E I Y+ N +EA K ++ +V Y LA
Sbjct: 624 MNMYGIY------LENGIGGYK-------------NLDEAFKYYLASTSDEYVPGIYNLA 664
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
C G G + A + +L+A+E GY A + YS+G+G+ ++A+++ K+AA
Sbjct: 665 RCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMYSYGDGINQDKQKAKEYFKQAA 724
Query: 260 DCGHGKA 266
+ G +A
Sbjct: 725 NKGMKEA 731
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + A+ G+V A LA G GV + Q+A Y A G+ RA+ N C
Sbjct: 176 QAFRYYQSATSLGNVVASCNLAYFYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYC 235
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG 278
Y +G G + +A + +AA G+ +A G L F EG
Sbjct: 236 YEYGHGTAVDLPRAVNYYYQAAKLGYSEALYSLGTCLEFGEG 277
>gi|374626152|ref|ZP_09698566.1| hypothetical protein HMPREF0978_01886 [Coprobacillus sp.
8_2_54BFAA]
gi|373914678|gb|EHQ46493.1| hypothetical protein HMPREF0978_01886 [Coprobacillus sp.
8_2_54BFAA]
Length = 742
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 23/224 (10%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVR 193
E+ S YRQA+ D A A N +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 292
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 26/253 (10%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAA-------------QPANAEEAV 180
A + Y ++D E A+ YR A G P A + +A
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 295
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNLDKAFTYLQIAANQGY 620
Query: 296 TAADHVKNVILQQ 308
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGAAVDLPRAVNYYYQAAK 258
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG A + + E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCFEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 273 GLFTE 277
G F E
Sbjct: 377 GYFYE 381
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 25/175 (14%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ----- 172
+AL+ F KGA ++ + G +Y E D +A Y+ A LG+ A
Sbjct: 140 EALEYFKKGAEVDNSDCVCIIGYLYERGLGVEQDHYQA-FRYYQSATSLGNVVASCNLAY 198
Query: 173 --------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+ ++A +L + AG RA L C G G +L A +Y +AA+
Sbjct: 199 FYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCYEYGHGAAVDLPRAVNYYYQAAK 258
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 273
GY A+Y+ C+ FGEG+ +A K + AA+ GH ++Q E+GLG
Sbjct: 259 LGYSEALYSLGTCFEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLG 313
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
++YR A L + N ++A L A+ G+ A + L G G NL E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
A ++YL + YV +YN + CY +G G + A K +A++ G+ A
Sbjct: 644 AFKYYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASF 697
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 89 KSWNDALRPLR--EAMV-------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
+ ++D L+ ++ EA + + R G+ + KNLDKA A +G A
Sbjct: 564 EQYHDDLKAIKYYEAAIDQNDVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPA 623
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLA 199
M G+ E I Y+ N +EA K ++ +V Y LA
Sbjct: 624 MNMYGIY------LENGIGGYK-------------NLDEAFKYYLASTSDEYVPGIYNLA 664
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
C G G + A + +L+A+E GY A + YS+G+G+ ++A+++ K+AA
Sbjct: 665 RCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMYSYGDGINQDKQKAKEYFKQAA 724
Query: 260 DCGHGKA 266
+ G +A
Sbjct: 725 NKGMKEA 731
>gi|365830265|ref|ZP_09371848.1| hypothetical protein HMPREF1021_00612 [Coprobacillus sp. 3_3_56FAA]
gi|365263647|gb|EHM93473.1| hypothetical protein HMPREF1021_00612 [Coprobacillus sp. 3_3_56FAA]
Length = 742
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 23/224 (10%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-- 148
W + A L+ ++ G+G +L A ++LK A +G + A G Y
Sbjct: 324 WYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQFWLGYFYENH 383
Query: 149 -EMDKKEAAISL-YRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVR 193
E+ S YRQA+ D A A N +A++L +A+ G+
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ LA C G G+D +L EA R+Y A + GY RA+ N Y GEG+ + H QA K
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNEAVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAFK 503
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATR 292
++AA+ + L H + EG ++ KA+ Y ELA+
Sbjct: 504 LYQKAAEANYAPG-LYHLALAYEEGNGVDVDIDKAIEYYELASH 546
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 26/253 (10%)
Query: 79 PQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
P+++ A C W + ++ G ++ G GV++NL KA++ + K A +G
Sbjct: 384 PEIKNAPYRCSYWYRQASKQNDVQAIVALGYCYESGFGVKQNLIKAIELYNKAANQGYAP 443
Query: 139 AMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAA-------------QPANAEEAV 180
A + Y ++D E A+ YR A G P A + +A
Sbjct: 444 AQCNLAYCYEMGIGIDVDLNE-AVRYYRLAGDAGYPRALCNLGYLYDHGEGVDVDHHQAF 502
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
KL +A+ A + Y LAL G GVD ++ +A +Y A+ Y A+YN L Y
Sbjct: 503 KLYQKAAEANYAPGLYHLALAYEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEH 562
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 295
E +A K+ + A D +A L L EG+++ KA YL++A G
Sbjct: 563 NEQYH-DDLKAIKYYEAAIDQNDVRAMYRMALYL-DEGKVIAKNLDKAFTYLQIAANQGY 620
Query: 296 TAADHVKNVILQQ 308
A ++ + L+
Sbjct: 621 GPAMNMYGIYLEN 633
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAV 165
++ G GV+++ KA + + GA G A+ + G Y E A A++ Y QAA
Sbjct: 200 YELGIGVKQDYQKAFELYEFGARAGFARAICNLGYCY-EYGHGTAVDLPRAVNYYYQAAK 258
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG A + + E A K +A+ GH R+Q++L C G G +
Sbjct: 259 LGYSEALYSLGTCLEFGEGIEQDIERAFKCYEEAANQGHERSQHRLGYCYENGLGTIQDF 318
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A WY +A++ Y A+ + CY G+G + + AR+ +AA G+ +AQ L
Sbjct: 319 VKAFYWYYQASQVNYAPALIALASCYELGQGTDIDLKAARQNYLKAARQGYSRAQF--WL 376
Query: 273 GLFTE 277
G F E
Sbjct: 377 GYFYE 381
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK-----EAAI--- 157
++ G GV ++DKA++ + + + +A+ + GL+Y + D K EAAI
Sbjct: 524 YEEGNGVDVDIDKAIEYYELASHQDYGIALYNLGLIYEHNEQYHDDLKAIKYYEAAIDQN 583
Query: 158 ---SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
++YR A L + N ++A L A+ G+ A + L G G NL E
Sbjct: 584 DVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPAMNMYGIYLENGIGGYKNLDE 643
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
A + YL + YV +YN + CY +G G + A K +A++ G+ A
Sbjct: 644 AFKCYLASTSDEYVPGIYNLARCYFYGIGTTVDKASAFKLFLKASERGYYDASF 697
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 89 KSWNDALRPLR--EAMV-------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
+ ++D L+ ++ EA + + R G+ + KNLDKA A +G A
Sbjct: 564 EQYHDDLKAIKYYEAAIDQNDVRAMYRMALYLDEGKVIAKNLDKAFTYLQIAANQGYGPA 623
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLA 199
M G+ E I Y+ N +EA K ++ +V Y LA
Sbjct: 624 MNMYGIY------LENGIGGYK-------------NLDEAFKCYLASTSDEYVPGIYNLA 664
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
C G G + A + +L+A+E GY A + YS+G+G+ ++A+++ K+AA
Sbjct: 665 RCYFYGIGTTVDKASAFKLFLKASERGYYDASFMIGYMYSYGDGINQDKQKAKEYFKQAA 724
Query: 260 DCGHGKA 266
+ G +A
Sbjct: 725 NKGMKEA 731
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + A+ G+V A LA G GV + Q+A Y A G+ RA+ N C
Sbjct: 176 QAFRYYQSATSLGNVVASCNLAYFYELGIGVKQDYQKAFELYEFGARAGFARAICNLGYC 235
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEG 278
Y +G G + +A + +AA G+ +A G L F EG
Sbjct: 236 YEYGHGTAVDLPRAVNYYYQAAKLGYSEALYSLGTCLEFGEG 277
>gi|403054362|ref|ZP_10908846.1| hypothetical protein AberL1_23156 [Acinetobacter bereziniae LMG
1003]
Length = 303
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEA----- 155
G + G GV N KA + F + A G+ AM GL+Y E+D K+A
Sbjct: 61 GSMYATGEGVDLNPKKAFELFEQAANLGNDEAMFQLGLIYNDGSNYLKEIDNKKALYWYK 120
Query: 156 -------AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
A +L+ D N +A + ++A+ G +++Q +A L+ G G+
Sbjct: 121 KAAEKNNAAALHNMGVAYYDGVGVAQNKSQAYEYFHKAAELGFLQSQIIVAYQLYTGTGI 180
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+L ++ W ++AAE G +++ N +L Y GEG+ ++ W ++A+ G+ +AQ
Sbjct: 181 TKDLSQSFYWSMKAAEQGDIKSQNNVALNYEKGEGVERDPIKSLNWFIKSANNGNVEAQY 240
Query: 269 EHGLGLF----TEGEMMKAVVYLELATRAGETAA 298
L F T + KA+ Y E A + AA
Sbjct: 241 NTALKYFSGNGTNQDFSKAIEYAEKAATSNNKAA 274
>gi|167043546|gb|ABZ08242.1| putative TPR repeat region [uncultured marine microorganism
HF4000_APKG2J17]
Length = 369
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N + A+K A+ G AQY L L +G+GV N + A +W+ AAE G+ A +
Sbjct: 70 PQNDKTAMKWYKLAAKQGLANAQYNLGLMYRKGQGVPQNDKTAVKWFRLAAEQGFALAQF 129
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYL 287
N L Y G+G+P + + A KW+ AA+ GH AQ GL ++ G+ + AV +
Sbjct: 130 NLGLMYGKGQGVPQNDKTAVKWITLAAEQGHADAQNSLGL-MYENGDGVPQNDKTAVKWF 188
Query: 288 ELATRAGETAA 298
+LA G+ A
Sbjct: 189 KLAAEQGDAIA 199
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+GV +N A+ F A +G LA + GLMY G
Sbjct: 96 GLMYRKGQGVPQNDKTAVKWFRLAAEQGFALAQFNLGLMY-------------------G 136
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N + AVK + A+ GH AQ L L G GV N + A +W+ AAE G
Sbjct: 137 KGQGVPQNDKTAVKWITLAAEQGHADAQNSLGLMYENGDGVPQNDKTAVKWFKLAAEQGD 196
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A +N L Y GEG+P + + A KW + A + G AQ
Sbjct: 197 AIAQFNLGLMYRNGEGVPQNDKTAVKWYRLAVEQGLAGAQ 236
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ L RG+GV N + A +WY AA+ G A YN L Y G+G+P + +
Sbjct: 51 GNADAQSNLGQMYRRGQGVPQNDKTAMKWYKLAAKQGLANAQYNLGLMYRKGQGVPQNDK 110
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
A KW + AA+ G AQ GL ++ +G+ + AV ++ LA G A +
Sbjct: 111 TAVKWFRLAAEQGFALAQFNLGL-MYGKGQGVPQNDKTAVKWITLAAEQGHADAQN 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV +N A+ F A +G +A + GLMY + + A+ YR A
Sbjct: 168 GLMYENGDGVPQNDKTAVKWFKLAAEQGDAIAQFNLGLMYRNGEGVPQNDKTAVKWYRLA 227
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIA-----GHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G AQ E K+ Q + G AQ+ L G+GV N + A +W
Sbjct: 228 VEQGLAGAQTLVEELQKKIADQNELQARAKQGDAPAQFSLGFMYDTGKGVPQNDKTAVKW 287
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
Y AAE G A N + Y G+G+ + + W+ AA G+ A
Sbjct: 288 YKLAAEQGDATAQTNLGIKYFIGKGVVQDYVRTHMWLSIAASQGYKDA 335
>gi|397677072|ref|YP_006518610.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397761|gb|AFN57088.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 336
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G + + K++D + + A +G+ A ++ GLM+ D KE A+ Y+QA
Sbjct: 115 GNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDGAALDKEKALYWYQQA 174
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P A+ P + +A + +A+ G+ A+ L L G GV
Sbjct: 175 AEKGHPQAELILGNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPL 234
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++ WY +AAE G +A Y+ Y G+G+ + +A W ++AA+ HG AQ E
Sbjct: 235 DKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGIAVDKAKALSWYQQAAN--HGLAQAEL 292
Query: 271 GLGL-FTEGEMM-----KAVVYLELATRAGETAADH 300
LG+ F GE + A +L+ A G A +
Sbjct: 293 ALGIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 328
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 75 SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
S + + +A +L+ ++ N P A+ G + G V + KAL + +
Sbjct: 51 SSNIDKSKAFNLIQQAANKGFAPAEYAL-----GTFYYKGEAVAADKSKALYWYQQAVTH 105
Query: 135 GSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAAQ-------------PANAE 177
G A G MY+ D K ++ LY+QAA G+ AQ + E
Sbjct: 106 GDADAAFALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDGAALDKE 165
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A+ QA+ GH +A+ L + G V + +A WY +AA G A N L
Sbjct: 166 KALYWYQQAAEKGHPQAELILGNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLM 225
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM-----KAVVYLELAT 291
Y+ G+G+PL ++ W ++AA+ G AQ E+ LG ++ G+ + KA+ + + A
Sbjct: 226 YAHGDGVPLDKNKSLSWYQKAAE--QGDAQAEYSLGNMYYNGDGIAVDKAKALSWYQQAA 283
Query: 292 RAGETAADHVKNVILQQLSATSRDR 316
G A+ ++ + D+
Sbjct: 284 NHGLAQAELALGIMFYNGEGVTVDK 308
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KA + + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKAFNLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD A A + ++V L QA+ G+ +AQ L L RG G +
Sbjct: 105 HGDADAAFALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDGAALDK 164
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++A WY +AAE G+ +A Y GE +PL +A +W ++AA+ G+ A+L GL
Sbjct: 165 EKALYWYQQAAEKGHPQAELILGNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGL 224
Query: 273 GLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 327
++ G+ + K++ + + A G+ A++ + + D+A + SW
Sbjct: 225 -MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGIAVDKAKAL--SWYQQ 281
Query: 328 PSLH 331
+ H
Sbjct: 282 AANH 285
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
A L G F G G + +KAL + + A +G A + G +Y+ + K
Sbjct: 143 NAQAQLNLGLMFSRGDGAALDKEKALYWYQQAAEKGHPQAELILGNLYYNGETVPLDKSK 202
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A Y++AA G+ AA+ P + +++ +A+ G +A+Y L
Sbjct: 203 AFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMY 262
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ G G+ + +A WY +AA G +A + + GEG+ + A W+K+AA+ G
Sbjct: 263 YNGDGIAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHG 322
Query: 263 HGKAQLE 269
+ A+ +
Sbjct: 323 NDTAKYQ 329
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G V + KA + + K A +G+ A ++ GLMY D K ++S Y++A
Sbjct: 187 GNLYYNGETVPLDKSKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKA 246
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD A+ + +A+ QA+ G +A+ L + + G GV
Sbjct: 247 AEQGDAQAEYSLGNMYYNGDGIAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTV 306
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
+ AA W +AA G A Y L +++
Sbjct: 307 DKNNAAYWLKQAANHGNDTAKYQLKLWFNY 336
>gi|62511130|sp|Q9ESM7.1|SE1L1_MESAU RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|9967440|dbj|BAB12403.1| SEL1L [Mesocricetus auratus]
Length = 794
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+ ++ YR
Sbjct: 262 GFLYVSGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESVLTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|237748454|ref|ZP_04578934.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379816|gb|EEO29907.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 544
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 22/197 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EA 155
+A+V+L G + G+ + +N KA+ + + A + + A + G Y++ +DK
Sbjct: 119 KALVML--GNLHRKGQCIAENYPKAIAYWKRAAVQNNVWAYHNLGTAYYDGIGVDKNPHE 176
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ +++AA LG P +Q + +EAV ++++ G QY L +
Sbjct: 177 AVRWWKKAAELGFPESQNNLGALYNDGNGVDRDYQEAVFWYRKSALQGDELGQYNLGVAY 236
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ GRG+ + EA WY ++AE Y +A +N + Y GEG+ + +A W K+AA+
Sbjct: 237 YYGRGIKKDFSEAVSWYKKSAEQDYAQAQHNLGVTYYEGEGIKKDYAKAVYWWKKAAE-- 294
Query: 263 HGKAQLEHGLGL-FTEG 278
G Q ++ LG+ + EG
Sbjct: 295 QGIPQSQYNLGIAYEEG 311
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + G G++K+ KA+ + K A +G + + G+ Y W +K E A+ YR+A
Sbjct: 269 GVTYYEGEGIKKDYAKAVYWWKKAAEQGIPQSQYNLGIAYEEGWGAEKNPENAVFWYRKA 328
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ N +VK L +A+ G RAQ+ L + G G++
Sbjct: 329 AEQGHADAQNRLGIAYRYGTGVRKNPALSVKWLEKAAKQGLARAQFNLGKTFYIGAGINK 388
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N +A W+++AA G+ A + Y G+ + + ++ W+K+AA+ KAQ
Sbjct: 389 NTDKAVYWFIKAANQGFTEAQAYIGMIYFKGKYVAKNEKKGFYWLKKAAEKDSAKAQAFL 448
Query: 271 GLGLFTEGEMMK 282
G L+ G +K
Sbjct: 449 G-ALYIAGNEVK 459
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISLY--RQA 163
G + +GRG++K+ +A+ + K A + A + G+ Y+E + KK+ A ++Y ++A
Sbjct: 233 GVAYYYGRGIKKDFSEAVSWYKKSAEQDYAQAQHNLGVTYYEGEGIKKDYAKAVYWWKKA 292
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A G P ++QY L + G G + N + A WY +AA
Sbjct: 293 AEQGIP-----------------------QSQYNLGIAYEEGWGAEKNPENAVFWYRKAA 329
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGE 279
E G+ A + Y +G G+ + + KW+++AA G +AQ G +G
Sbjct: 330 EQGHADAQNRLGIAYRYGTGVRKNPALSVKWLEKAAKQGLARAQFNLGKTFYIGAGINKN 389
Query: 280 MMKAVVYLELATRAGETAA 298
KAV + A G T A
Sbjct: 390 TDKAVYWFIKAANQGFTEA 408
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EE V +A+ +G+ AQY + ++ GRGV + A W+++AAE + +A+
Sbjct: 67 EETVSWCRKAAKSGNAEAQYLFGMLVYDGRGVQQDNCVAMLWWMKAAEQNHAKALVMLGN 126
Query: 237 CYSFGEGLPLSHRQARKWMKRAA 259
+ G+ + ++ +A + KRAA
Sbjct: 127 LHRKGQCIAENYPKAIAYWKRAA 149
>gi|431839185|gb|ELK01112.1| Protein sel-1 like protein 1 [Pteropus alecto]
Length = 794
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHNAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
+ ++A+K AS GH+ A Y LA G GV + A + E G
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHNAVELFKNVCERG 553
>gi|77166163|ref|YP_344688.1| Sel1 repeat-containing protein [Nitrosococcus oceani ATCC 19707]
gi|254435232|ref|ZP_05048739.1| Sel1 repeat family [Nitrosococcus oceani AFC27]
gi|76884477|gb|ABA59158.1| Sel1-like repeat protein [Nitrosococcus oceani ATCC 19707]
gi|207088343|gb|EDZ65615.1| Sel1 repeat family [Nitrosococcus oceani AFC27]
Length = 241
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQ 185
A VDAG ++ E A+ + A GD AQ P + EEA K +
Sbjct: 33 ADVDAGREAYKSQDYELALKEFMPLAEQGDENAQFYMGLMYANGYGLPKDPEEADKWFEK 92
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
S V A++ L + ++G+ V N+++A W+ +AA G A +N Y G G+P
Sbjct: 93 FSEHLDVSAKFNLGIMYYQGKSVPKNVEKAIAWFKKAAAEGDAEAQFNLGFIYDNGYGVP 152
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 300
+A KW + AA+ G +AQ G+ +++EG + ++A + +A + G+ A+
Sbjct: 153 QDREEALKWYRDAANQGIVEAQNNLGV-MYSEGQGIAKDYVQAYFWFNVAAKQGDKNAEK 211
Query: 301 VKNVILQQLSATSRDRAMLVVDSWR 325
+++ + + ++ + A+ + W+
Sbjct: 212 IRDTLAKDMNTSQMAEAIKLTHEWQ 236
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G G+ K+ ++A F K + A + G+MY Y+ +V
Sbjct: 70 GLMYANGYGLPKDPEEADKWFEKFSEHLDVSAKFNLGIMY------------YQGKSV-- 115
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N E+A+ +A+ G AQ+ L G GV + +EA +WY AA G
Sbjct: 116 -----PKNVEKAIAWFKKAAAEGDAEAQFNLGFIYDNGYGVPQDREEALKWYRDAANQGI 170
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V A N + YS G+G+ + QA W AA G A+
Sbjct: 171 VEAQNNLGVMYSEGQGIAKDYVQAYFWFNVAAKQGDKNAE 210
>gi|449119237|ref|ZP_21755633.1| polymorphic outer membrane protein [Treponema denticola H1-T]
gi|449121627|ref|ZP_21757973.1| polymorphic outer membrane protein [Treponema denticola MYR-T]
gi|448949068|gb|EMB29893.1| polymorphic outer membrane protein [Treponema denticola MYR-T]
gi|448950227|gb|EMB31049.1| polymorphic outer membrane protein [Treponema denticola H1-T]
Length = 721
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 84/195 (43%), Gaps = 25/195 (12%)
Query: 77 TLPQLRAASLVCKSWN----DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
TLPQ ++ DA EA LL GKR+ G GV K+ KA + F KGA
Sbjct: 52 TLPQNEKPEETISEFDKLKLDAEGGNSEAQYLL--GKRYSDGDGVEKDYKKAFEWFKKGA 109
Query: 133 ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHV 192
+G+ A G+ Y E ++ A+ L +A G+
Sbjct: 110 DQGNANAQNALGVCYDNGQGVEKNYTI-------------------AIDLYKKAIEQGNA 150
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+AQ L + + G GVD + ++A Y +AAE G A N Y GEG+ + +A
Sbjct: 151 KAQNNLGVMYYNGHGVDKSYEKAFELYKKAAEQGNAYAQNNLGYMYENGEGVEKNTSEAI 210
Query: 253 KWMKRAADCGHGKAQ 267
KW +AAD G AQ
Sbjct: 211 KWYTKAADQGVANAQ 225
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV KN +A+ + K A +G A G + ++ A ++Y AA G
Sbjct: 193 GYMYENGEGVEKNTSEAIKWYTKAADQGVANAQDSLGWICEVREEYNKAAAMYLMAAQQG 252
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
Q + ++A++ +++ GH AQ L + G GVD N ++
Sbjct: 253 HANGQNNLGRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYYNGYGVDKNYKQ 312
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A WY ++AE G+ A Y+ Y G+G ++A +W ++A+ GH AQ G +
Sbjct: 313 ALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGHAYAQNNLGY-M 371
Query: 275 FTEGEMMK 282
+ G+ +K
Sbjct: 372 YENGKGVK 379
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV K+ +AL+ + K A +G A + G MY+
Sbjct: 261 GRMYYNGYGVDKDYKQALEWYTKSAEQGHAYAQNNLGYMYY------------------- 301
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N ++A++ +++ GH AQY L G+G + ++A WY ++AE G+
Sbjct: 302 NGYGVDKNYKQALEWYTKSAEQGHSYAQYSLGFMYDNGQGTKKDEKKAVEWYTKSAEQGH 361
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A N Y G+G+ + + A W K+A + H A+
Sbjct: 362 AYAQNNLGYMYENGKGVKIDYDTAISWFKKAVENKHPDAE 401
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ AQY L G GV+ + ++A W+ + A+ G A +CY G+G+ ++
Sbjct: 75 GGNSEAQYLLGKRYSDGDGVEKDYKKAFEWFKKGADQGNANAQNALGVCYDNGQGVEKNY 134
Query: 249 RQARKWMKRAADCGHGKAQLEHGL 272
A K+A + G+ KAQ G+
Sbjct: 135 TIAIDLYKKAIEQGNAKAQNNLGV 158
>gi|254448217|ref|ZP_05061679.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium HTCC5015]
gi|198262084|gb|EDY86367.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium HTCC5015]
Length = 281
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G G+ +N K++ + K A +G +A GL Y + E A+ + +A
Sbjct: 39 GLMYEVGMGITQNHGKSVYWYQKAARQGFAIAQNSLGLAYLNGEGTLQSYEKAVHWFEKA 98
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ P + ++A +++ G+ AQ L GR V
Sbjct: 99 AQQGYAVAQYNLGSRYAKGQGVPQSHKKATSWFKKSAHQGNASAQNNLGAQYLFGRSVPQ 158
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A W+ AA+ G YN Y+ G+G+P SH QA W K+AA GH AQ
Sbjct: 159 SYEKAMYWFEMAAQKGEPTGQYNLGDMYAQGQGVPQSHEQAAYWYKKAAQQGHTPAQNNL 218
Query: 271 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G+ ++ +GE + A + LA AG A + N + + ++AT +A + W
Sbjct: 219 GV-MYIKGEGVPQSQVIAAKWFILAKMAGNDKAANNLNRVQKTMTATEISKAERLAQLW 276
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+KN +KA A RG+ A + GLMY E + + + N
Sbjct: 13 KKNYEKAKSLLEPLAKRGAVEAQFNLGLMY------EVGMGITQ-------------NHG 53
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
++V +A+ G AQ L L G G + ++A W+ +AA+ GY A YN
Sbjct: 54 KSVYWYQKAARQGFAIAQNSLGLAYLNGEGTLQSYEKAVHWFEKAAQQGYAVAQYNLGSR 113
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRA 293
Y+ G+G+P SH++A W K++A G+ AQ G G KA+ + E+A +
Sbjct: 114 YAKGQGVPQSHKKATSWFKKSAHQGNASAQNNLGAQYLFGRSVPQSYEKAMYWFEMAAQK 173
Query: 294 GETAADH 300
GE +
Sbjct: 174 GEPTGQY 180
>gi|432431915|ref|ZP_19674347.1| hypothetical protein A13K_02200 [Escherichia coli KTE187]
gi|432844580|ref|ZP_20077479.1| hypothetical protein A1YS_02219 [Escherichia coli KTE141]
gi|430953464|gb|ELC72362.1| hypothetical protein A13K_02200 [Escherichia coli KTE187]
gi|431394907|gb|ELG78420.1| hypothetical protein A1YS_02219 [Escherichia coli KTE141]
Length = 649
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +AE +A Y Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMTMAINLLKAAADHGDIDAALVL 510
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + ++I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILSMIYYQ 554
>gi|332842879|ref|XP_510102.3| PREDICTED: protein sel-1 homolog 1 [Pan troglodytes]
gi|397475013|ref|XP_003808949.1| PREDICTED: protein sel-1 homolog 1 [Pan paniscus]
gi|410214600|gb|JAA04519.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410214602|gb|JAA04520.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410255208|gb|JAA15571.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410255210|gb|JAA15572.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410299030|gb|JAA28115.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410355707|gb|JAA44457.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
gi|410355709|gb|JAA44458.1| sel-1 suppressor of lin-12-like [Pan troglodytes]
Length = 794
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|268592892|ref|ZP_06127113.1| TPR repeat protein, protein-protein interaction [Providencia
rettgeri DSM 1131]
gi|291311682|gb|EFE52135.1| TPR repeat protein, protein-protein interaction [Providencia
rettgeri DSM 1131]
Length = 267
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G+R+ G GV ++ A + F+K +G++ A G M+ + DK A+ Y
Sbjct: 57 GERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLGTMFVNGFGVRRDYDK---AMLWY 113
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
QAA GD RA+ +A+ +G GV NL++AA W+
Sbjct: 114 EQAAAQGD-----------------------TRAETNMAMMYAQGLGVSQNLEKAAFWFR 150
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-- 278
+AA+GG + A + YS G G+ L +A W ++AA K+Q G+ +++EG
Sbjct: 151 KAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWFRKAAKQKDAKSQDRLGV-MYSEGRG 209
Query: 279 ---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+ +A +L A +G + ++N I QLS +A + + +
Sbjct: 210 VKKNLQQAYAWLATAVYSGNAESHRLQNKIAAQLSPEELQQAQKLAEGY 258
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G F +G GVR++ DKA+ + + AA+G T A + +MY A
Sbjct: 90 FRLGTMFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMY---------------AQ 134
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG N E+A +A+ G++ AQ+Q+ G GVD + ++A W+ +AA+
Sbjct: 135 GLG----VSQNLEKAAFWFRKAAQGGNILAQFQIGQMYSIGSGVDLDDEKAVFWFRKAAK 190
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
++ + YS G G+ + +QA W+ A G+ ++
Sbjct: 191 QKDAKSQDRLGVMYSEGRGVKKNLQQAYAWLATAVYSGNAES 232
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E +++ + Q + G +AQ+QL +G GV + + AA W+++A G A +
Sbjct: 35 EPSIEQITQLAQKGDPKAQFQLGERYFKGLGVSQDSKAAAEWFIKAGNQGNSDAQFRLGT 94
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATR 292
+ G G+ + +A W ++AA G +A+ + + GL + KA + A +
Sbjct: 95 MFVNGFGVRRDYDKAMLWYEQAAAQGDTRAETNMAMMYAQGLGVSQNLEKAAFWFRKAAQ 154
Query: 293 AGETAA 298
G A
Sbjct: 155 GGNILA 160
>gi|426377678|ref|XP_004055587.1| PREDICTED: protein sel-1 homolog 1 [Gorilla gorilla gorilla]
Length = 794
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|354477644|ref|XP_003501029.1| PREDICTED: protein sel-1 homolog 1 isoform 1 [Cricetulus griseus]
gi|344249723|gb|EGW05827.1| Protein sel-1-like 1 [Cricetulus griseus]
Length = 794
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSN-SAFILDQKEAT 603
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 84/231 (36%), Gaps = 61/231 (26%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV----------DFNLQEAAR 217
+ ++A+K AS GH+ A Y LA G GV N+ E R
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGR 554
Query: 218 W----------------------YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR--- 252
W YL AE GY A N++ E + +
Sbjct: 555 WSERLMTAYNSYKDGDYNAAVVQYLLLAEQGYEVAQSNSAFILDQKEATIVGENETYPRA 614
Query: 253 --KWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETA 297
W RAA G+ A+++ H G T+ + A ++ LA+ +A
Sbjct: 615 LLHW-NRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSA 664
>gi|403264818|ref|XP_003924668.1| PREDICTED: protein sel-1 homolog 1 [Saimiri boliviensis
boliviensis]
Length = 795
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 388 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 447
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 448 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 507
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 508 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 567
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 568 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 604
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 263 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 322
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 323 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 382
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 383 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 442
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 443 ADMGNPVGQ--SGLGM 456
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 455 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 502
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 503 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 536
>gi|384411622|ref|YP_005620987.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931996|gb|AEH62536.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 197
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 165 VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
VLG+ A P + E+AV +A+ G +QY L GRGV + ++AA WY
Sbjct: 47 VLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYR 106
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+AA+ +++A YN L Y G+GLP S A W ++AAD G+ AQL G
Sbjct: 107 KAADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAADQGYADAQLNLG 157
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HGRG ++ +KA+ + K A +G + + G Y +D ++AA YR+
Sbjct: 49 GEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAF-WYRK 107
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA ++AQY L L +G+G+ + + AA W+ +A
Sbjct: 108 AA-----------------------DQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKA 144
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A+ GY A N Y G+G+ AR W+++AAD G+ KA+
Sbjct: 145 ADQGYADAQLNLGKAYYLGQGVVQDKGIARFWIQQAADKGNAKAK 189
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG+ A+ L GRG + ++A WY +AA+ G + YN Y G G+ + +
Sbjct: 39 AGNRLAEEVLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDY 98
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+A W ++AAD +AQ GL L+ +G+
Sbjct: 99 EKAAFWYRKAADQNFIQAQYNLGL-LYVKGQ 128
>gi|348573207|ref|XP_003472383.1| PREDICTED: protein sel-1 homolog 1-like [Cavia porcellus]
Length = 798
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 445
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 505
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMSAYNSY 565
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 566 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 602
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 43/274 (15%)
Query: 32 LTASARKARIKRRSRF-SCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQ-LRAASLVCK 89
L S +K++I+ R+ + S+ T+ + S + + LPQ ++AA + +
Sbjct: 193 LNGSNKKSQIREAYRYLQKAASMNHTKALERVSYA------LLFGYYLPQNIQAAKEMFE 246
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
+ P + + G + G GV + KAL + GA G+ +A + G YW
Sbjct: 247 KLTEEGSPKGQTAL----GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWA 302
Query: 150 ----MDKKEAAISLYRQAA----------------------VLGDPAAQPANAEEAVKLL 183
+ E+A++ YR A + +P EE +
Sbjct: 303 GIGVLQSCESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQY 362
Query: 184 YQ-ASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
YQ + G V+AQ L L LH GRGV+ N Q A ++ AA G AM YS G
Sbjct: 363 YQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEG 422
Query: 242 EGL-PLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
+ P S+ A + K+AAD G+ Q GLG+
Sbjct: 423 SDIVPQSNETALHYFKKAADMGNPVGQ--SGLGM 454
>gi|184156430|ref|YP_001844769.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ACICU]
gi|260557655|ref|ZP_05829869.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332875557|ref|ZP_08443370.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|417548213|ref|ZP_12199294.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417567536|ref|ZP_12218408.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|417576511|ref|ZP_12227356.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|421631487|ref|ZP_16072156.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|445450083|ref|ZP_21444418.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-92]
gi|445491657|ref|ZP_21459888.1| Sel1 repeat protein [Acinetobacter baumannii AA-014]
gi|183208024|gb|ACC55422.1| TPR repeat, SEL1 subfamily protein [Acinetobacter baumannii ACICU]
gi|193075991|gb|ABO10574.2| putative signal peptide [Acinetobacter baumannii ATCC 17978]
gi|260408828|gb|EEX02132.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332736260|gb|EGJ67274.1| Sel1 repeat protein [Acinetobacter baumannii 6014059]
gi|395553208|gb|EJG19216.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395569732|gb|EJG30394.1| Sel1 repeat protein [Acinetobacter baumannii Naval-17]
gi|400388512|gb|EJP51584.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|408692759|gb|EKL38373.1| Sel1 repeat protein [Acinetobacter baumannii OIFC180]
gi|444756066|gb|ELW80625.1| Sel1 repeat protein [Acinetobacter baumannii WC-A-92]
gi|444764195|gb|ELW88518.1| Sel1 repeat protein [Acinetobacter baumannii AA-014]
gi|452950078|gb|EME55543.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
baumannii MSP4-16]
Length = 230
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K++ +A + F K A +G A + G++Y D+ G
Sbjct: 83 GMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLY---DR--------------G 125
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AQ N E+A + +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 126 EGTAQ--NYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN + Y GEG P + + A+KW ++AAD G A+
Sbjct: 184 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAK 223
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY+ E
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEK------------------- 94
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ + A + +A+ GH +AQY L + RG G N ++A WY RAAE GY A YN
Sbjct: 95 DMKRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S QA KW +AA+ H ++ ++ L ++ GE L+LA +
Sbjct: 155 AHLYKKGHGVAQSDEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKW 210
Query: 294 GETAAD 299
+ AAD
Sbjct: 211 FQQAAD 216
>gi|291406675|ref|XP_002719662.1| PREDICTED: sel-1 suppressor of lin-12-like isoform 1 [Oryctolagus
cuniculus]
Length = 794
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|288963182|ref|YP_003453461.1| hypothetical protein AZL_f01570 [Azospirillum sp. B510]
gi|288915434|dbj|BAI76917.1| hypothetical protein AZL_f01570 [Azospirillum sp. B510]
Length = 452
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVL 166
F HG G ++ +AL + K AA+ A+ GL + AA+ +R+AA L
Sbjct: 132 FPHGLGAAPDMAEALSWYEKAAAQNHAEAIYHLGLFHTFGQGVPQDYAAAVPWFRKAAEL 191
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ + EA+ +++ G+ AQ+ L L G+GV+ + +
Sbjct: 192 GHATAQMKLGSLYAQGNGVAQDMAEALSWYEKSAENGNAGAQFSLGLAWEHGQGVEPDAE 251
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+AA WY RAAE + A + L Y+ G G+P +R+ KW + +A+ G+ AQ LG
Sbjct: 252 KAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQDYRETLKWCRLSAEKGNSSAQFN--LG 309
Query: 274 LFTEGEMMKAVVYLELAT 291
L + A + E AT
Sbjct: 310 LLHARGLAGAADFGEAAT 327
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
PL E A R G+ + G GV +N A K AA+G A GL
Sbjct: 43 PLAEQGDAEAQFRVGQSYIRGEGVVRNFGDAAHWLRKAAAQGHVEAQFTLGLFL------ 96
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC--LHRGRGVDFN 211
G+ A Q + A + +Q S A H RA + L G G +
Sbjct: 97 -----------ANGEGAPQ----DNAPPVRWQRSAAQHNRAAAEANLALLFPHGLGAAPD 141
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ EA WY +AA + A+Y+ L ++FG+G+P + A W ++AA+ GH AQ++ G
Sbjct: 142 MAEALSWYEKAAAQNHAEAIYHLGLFHTFGQGVPQDYAAAVPWFRKAAELGHATAQMKLG 201
Query: 272 LGLFTEG-----EMMKAVVYLELATRAGETAA 298
L+ +G +M +A+ + E + G A
Sbjct: 202 -SLYAQGNGVAQDMAEALSWYEKSAENGNAGA 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
+PQ AA++ W L A ++ G + G GV +++ +AL + K A G+
Sbjct: 174 VPQDYAAAV---PWFRKAAELGHATAQMKLGSLYAQGNGVAQDMAEALSWYEKSAENGNA 230
Query: 138 LAMVDAGLMYWEMDK-----KEAAISLYRQAAVLGDPAAQ-------------PANAEEA 179
A GL WE + E A YR+AA P AQ P + E
Sbjct: 231 GAQFSLGLA-WEHGQGVEPDAEKAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQDYRET 289
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+K ++ G+ AQ+ L L RG + EAA WY +AA G V A N L
Sbjct: 290 LKWCRLSAEKGNSSAQFNLGLLHARGLAGAADFGEAATWYRKAAVQGNVNAQVNLGLLLL 349
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQL 268
G G +A W++RAA GH A L
Sbjct: 350 KGTGGRPEVLEAVDWLRRAAAQGHFAAML 378
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++HG+GV + +KA + + A + +A + GL+Y D +E + R
Sbjct: 237 GLAWEHGQGVEPDAEKAAHWYRRAAEQDHPVAQLHLGLLYASGRGVPQDYRET-LKWCRL 295
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G+ +AQ A+ EA +A++ G+V AQ L L L +G G
Sbjct: 296 SAEKGNSSAQFNLGLLHARGLAGAADFGEAATWYRKAAVQGNVNAQVNLGLLLLKGTGGR 355
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
+ EA W RAA G+ AM N + Y G+G ++ QA W + AA
Sbjct: 356 PEVLEAVDWLRRAAAQGHFAAMLNLASLYETGQGGAVNPPQACMWYRVAASV 407
>gi|339481796|ref|YP_004693582.1| Sel1 domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338803941|gb|AEJ00183.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 200
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPAN 175
GV K+ +A + K A +G T A + G Y Y+ V D A
Sbjct: 12 GVSKDYAQAASWYRKAAEQGHTGAQFNLGNAY------------YKGEGVSKDYA----- 54
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
+AV +A+ G AQY L +RG+ V + +AA W+ +AAE GY RA Y+
Sbjct: 55 --QAVSWYRKAAEQGLAVAQYSLGNEYYRGKAVPKDYVQAASWFRKAAEQGYDRAQYDLG 112
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLEL 289
+ Y GEG+P +A W + AA+ GH AQ + LGLF E ++++A +
Sbjct: 113 MLYVSGEGVPQDDAKAASWFREAAEQGHAGAQYD--LGLFYESGKGVPYDLVQAKSWYRK 170
Query: 290 ATRAGETAADHVKNVI--LQQLSATSRDR 316
A G A + ++ L++LS ++ +
Sbjct: 171 AADQGHVKAKGILEILGRLEKLSRETKGK 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+ V K+ +A F K A +G A D G++Y V G
Sbjct: 76 GNEYYRGKAVPKDYVQAASWFRKAAEQGYDRAQYDLGMLY-----------------VSG 118
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + +A +A+ GH AQY L L G+GV ++L +A WY +AA+ G+
Sbjct: 119 EGV--PQDDAKAASWFREAAEQGHAGAQYDLGLFYESGKGVPYDLVQAKSWYRKAADQGH 176
Query: 228 VRA 230
V+A
Sbjct: 177 VKA 179
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
R GV + +AA WY +AAE G+ A +N Y GEG+ + QA W ++AA+ G
Sbjct: 9 RFNGVSKDYAQAASWYRKAAEQGHTGAQFNLGNAYYKGEGVSKDYAQAVSWYRKAAEQGL 68
Query: 264 GKAQLEHG 271
AQ G
Sbjct: 69 AVAQYSLG 76
>gi|410962775|ref|XP_003987944.1| PREDICTED: protein sel-1 homolog 1 [Felis catus]
Length = 795
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 388 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 447
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 448 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 507
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 508 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 567
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 568 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 604
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 263 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 322
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 323 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 382
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 383 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 442
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 443 ADMGNPVGQ--SGLGM 456
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 455 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 502
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 503 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 536
>gi|160900665|ref|YP_001566247.1| Sel1 domain-containing protein [Delftia acidovorans SPH-1]
gi|160366249|gb|ABX37862.1| Sel1 domain protein repeat-containing protein [Delftia acidovorans
SPH-1]
Length = 416
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
EA G +K G+GV + + A + K A +G A + GLMY + + +A
Sbjct: 130 EASAQYALGSLYKRGQGVAPSAETAAQWYEKSAQQGYAPAQSELGLMYANGRGVARDDAQ 189
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR+AA GD AQ + +AV+ +++ G QY L +
Sbjct: 190 AVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRSAEQGEAAGQYSLGVMY 249
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV ++ +A RW++ AA G+ A +N + Y+ G + QA W+++AA+ G
Sbjct: 250 ATGRGVAEDVGQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDRDMAQAAHWLEKAAEQG 309
Query: 263 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGE 295
+ AQ G+ L+ G+ + KA +LE A + G+
Sbjct: 310 NAAAQSNLGV-LYANGQGVPASDEKAARWLERAAQQGD 346
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGV ++ +A+ + K A +G +A + GLM E A+ ++++
Sbjct: 174 GLMYANGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRS 233
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ A Q + +A++ A+ GH AQ+ + G VD
Sbjct: 234 AEQGEAAGQYSLGVMYATGRGVAEDVGQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDR 293
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 269
++ +AA W +AAE G A N + Y+ G+G+P S +A +W++RAA G AQ
Sbjct: 294 DMAQAAHWLEKAAEQGNAAAQSNLGVLYANGQGVPASDEKAARWLERAAQQGDALAQSNL 353
Query: 270 ---HGLGLFTEGEMMKAVVYLELATRAGETAADHVK-NVILQQLSATSRDR 316
+ G E + +A ++ LA AG ++ K + + Q LSA R R
Sbjct: 354 ASLYASGKGVERSLSQAYFWMLLA--AGRDSSLTAKRDSMAQPLSAAERAR 402
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P +P + V L+Q + G AQY L RG+GV + + AA+WY ++A+ GY
Sbjct: 108 PKGEPGLSAAEVAALHQHAEQGEASAQYALGSLYKRGQGVAPSAETAAQWYEKSAQQGYA 167
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKA 283
A L Y+ G G+ QA +W ++AA+ G AQ GL + EG + +A
Sbjct: 168 PAQSELGLMYANGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGL-MLAEGRGAAKDPAQA 226
Query: 284 VVYLELATRAGETAADHVKNVI 305
V + + + GE A + V+
Sbjct: 227 VQWFQRSAEQGEAAGQYSLGVM 248
>gi|163803482|ref|ZP_02197353.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
gi|159172700|gb|EDP57550.1| Sel1 domain protein repeat-containing protein [Vibrio sp. AND4]
Length = 307
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ +Y A LG+ AQ P + +EA K A+ G + A++ L +
Sbjct: 50 VGIYYSEAALGNADAQFNLASIYGTGRGVPQDYKEAFKWCCLAAEQGVLAAEFTLGVMYA 109
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G+GV N QE+ +W+ +AAE G A YN + Y+ G G+P S + KW++R+AD
Sbjct: 110 HGQGVKKNYQESIKWFTKAAEKGDAEAQYNLGVAYANGLGVPQSDMEWVKWIRRSAD--Q 167
Query: 264 GKAQLEHGLG-LFTEGEMM 281
G AQ +H LG ++ EG+++
Sbjct: 168 GDAQAQHFLGEMYREGKVV 186
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HG+GV+KN +++ F K A +G A + G+ Y A LG
Sbjct: 105 GVMYAHGQGVKKNYQESIKWFTKAAEKGDAEAQYNLGVAY---------------ANGLG 149
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + E VK + +++ G +AQ+ L G+ V + +++ +WY +AAE G
Sbjct: 150 VPQSDM----EWVKWIRRSADQGDAQAQHFLGEMYREGKVVTQSDEQSVKWYRKAAEQGV 205
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
+A +N +L Y G S ++A KW AA GH AQ+ + E + + V++
Sbjct: 206 AQAQFNLALMYQDGLVCQRSDKEAMKWYYEAAKQGHAAAQMNLSICYAEEHDFYSSYVWV 265
Query: 288 ELATRAG 294
LA +G
Sbjct: 266 LLAKHSG 272
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 173 PANAEEAVKLL---YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P EE + ++ Y + G+ AQ+ LA GRGV + +EA +W AAE G +
Sbjct: 40 PVVKEEDIDIVGIYYSEAALGNADAQFNLASIYGTGRGVPQDYKEAFKWCCLAAEQGVLA 99
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVV 285
A + + Y+ G+G+ +++++ KW +AA+ G +AQ G+ GL M+ V
Sbjct: 100 AEFTLGVMYAHGQGVKKNYQESIKWFTKAAEKGDAEAQYNLGVAYANGLGVPQSDMEWVK 159
Query: 286 YLELATRAGETAADH 300
++ + G+ A H
Sbjct: 160 WIRRSADQGDAQAQH 174
>gi|384483828|gb|EIE76008.1| hypothetical protein RO3G_00712 [Rhizopus delemar RA 99-880]
Length = 610
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EA 155
E + + G ++ G GV KN+ +A+ + A +G+ A G Y + +D+
Sbjct: 241 ETVAIYNVGYCYEDGIGVEKNVQEAVKWYRLSAEQGNAFAQNSLGYCYEDGIGVDQDFNQ 300
Query: 156 AISLYRQAAVLGDPAAQP----------ANAEEAVKLLY---QASIAGHVRAQYQLALCL 202
A Y+++A G P A+ ++ ++ Y +A+I GH RAQ+ L C
Sbjct: 301 ATFWYQKSADQGYPWAECNLGYCFQNGIGVQKDDIRGAYWYRRAAIQGHARAQHNLGFCY 360
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV+ N +EA +WY R+AE G + A ++ CY G G+ + +A W +A
Sbjct: 361 QNGIGVEKNEEEAVKWYKRSAERGNIFAYHSLGYCYQNGIGVSTNEEEAVFWYMLSAKEN 420
Query: 263 HGKAQLEHGL 272
H AQL G
Sbjct: 421 HAPAQLSLGY 430
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G GV ++ ++A + K A +G A + G + + D A YR+
Sbjct: 285 GYCYEDGIGVDQDFNQATFWYQKSADQGYPWAECNLGYCFQNGIGVQKDDIRGAY-WYRR 343
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA+ G AQ N EEAVK +++ G++ A + L C G GV
Sbjct: 344 AAIQGHARAQHNLGFCYQNGIGVEKNEEEAVKWYKRSAERGNIFAYHSLGYCYQNGIGVS 403
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
N +EA WY+ +A+ + A + CY G G+P + R+A KW +++A+ G+ AQ
Sbjct: 404 TNEEEAVFWYMLSAKENHAPAQLSLGYCYRNGIGVPKNEREAVKWFRKSAEQGNALAQNS 463
Query: 268 ----LEHGLGL 274
E GLG+
Sbjct: 464 LGFCYEEGLGV 474
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G GV KN ++A+ + + A RG+ A G Y +E A+ Y +
Sbjct: 357 GFCYQNGIGVEKNEEEAVKWYKRSAERGNIFAYHSLGYCYQNGIGVSTNEEEAVFWYMLS 416
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A AQ P N EAVK +++ G+ AQ L C G GV
Sbjct: 417 AKENHAPAQLSLGYCYRNGIGVPKNEREAVKWFRKSAEQGNALAQNSLGFCYEEGLGVKK 476
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A WY ++A A N CY+ G G+ ++++A W K+AA H +A +
Sbjct: 477 DCPRAVYWYHKSARQNNSWAQCNLGFCYANGIGVQQNNQKAVFWYKQAAVQNHARALDKL 536
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAA--DHV 301
GL T + K LELA ++ AA DHV
Sbjct: 537 GLHFQTGLGVEKN---LELAFKSFLKAAEQDHV 566
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKKEA--AISLY 160
L G +++G GV KN +A+ F K A +G+ LA G Y E KK+ A+ Y
Sbjct: 426 LSLGYCYRNGIGVPKNEREAVKWFRKSAEQGNALAQNSLGFCYEEGLGVKKDCPRAVYWY 485
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++A + AQ N ++AV QA++ H RA +L L G G
Sbjct: 486 HKSARQNNSWAQCNLGFCYANGIGVQQNNQKAVFWYKQAAVQNHARALDKLGLHFQTGLG 545
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
V+ NL+ A + +L+AAE +V A Y+ + CY G G + +A W ++AA
Sbjct: 546 VEKNLELAFKSFLKAAEQDHVAAQYHLANCYEKGLGCEVDLGKATAWFEKAA 597
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 38/205 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM------------------VDAGLMYWE 149
G ++ G G+ ++ +A +L A RG LAM V+A +
Sbjct: 90 GFCYEFGFGLPRDFVQAETCYLSAAKRGDGLAMARLAFLRKYGRPRVRINRVEAEEWAEK 149
Query: 150 MDKKEAAISLYRQAAVL-GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
+ + A+ QAA L DP+AQ P + + A + ++ G+ R Q
Sbjct: 150 VKRCPNAVDWIVQAATLDADPSAQYALGVCYHDGVGMPKDEKAAFRWYKASADQGNARGQ 209
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
L C G GV + EA RWY AA G A+YN CY G G+ + ++A KW
Sbjct: 210 GILGYCYGEGFGVSKDEAEAMRWYRLAAAQGETVAIYNVGYCYEDGIGVEKNVQEAVKWY 269
Query: 256 KRAADCGHGKAQ------LEHGLGL 274
+ +A+ G+ AQ E G+G+
Sbjct: 270 RLSAEQGNAFAQNSLGYCYEDGIGV 294
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA++ A+ G A Y + C G GV+ N+QEA +WY +AE G A + C
Sbjct: 228 EAMRWYRLAAAQGETVAIYNVGYCYEDGIGVEKNVQEAVKWYRLSAEQGNAFAQNSLGYC 287
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y G G+ QA W +++AD G+ A+ G G+ + + ++ + A
Sbjct: 288 YEDGIGVDQDFNQATFWYQKSADQGYPWAECNLGYCFQNGIGVQKDDIRGAYWYRRAAIQ 347
Query: 294 GETAADHVKNVILQQLSATSRDRAMLV 320
G A H Q ++ V
Sbjct: 348 GHARAQHNLGFCYQNGIGVEKNEEEAV 374
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV+K+ +A+ + K A + ++ A + G Y + A+ Y+QA
Sbjct: 465 GFCYEEGLGVKKDCPRAVYWYHKSARQNNSWAQCNLGFCYANGIGVQQNNQKAVFWYKQA 524
Query: 164 AVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AV A N E A K +A+ HV AQY LA C +G G +
Sbjct: 525 AVQNHARALDKLGLHFQTGLGVEKNLELAFKSFLKAAEQDHVAAQYHLANCYEKGLGCEV 584
Query: 211 NLQEAARWYLRAAEG 225
+L +A W+ +AA G
Sbjct: 585 DLGKATAWFEKAAIG 599
>gi|332223462|ref|XP_003260889.1| PREDICTED: protein sel-1 homolog 1 [Nomascus leucogenys]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|325578342|ref|ZP_08148477.1| Sel1 repeat protein [Haemophilus parainfluenzae ATCC 33392]
gi|419803018|ref|ZP_14328196.1| Sel1 repeat protein [Haemophilus parainfluenzae HK262]
gi|419844813|ref|ZP_14368100.1| Sel1 repeat protein [Haemophilus parainfluenzae HK2019]
gi|325160078|gb|EGC72207.1| Sel1 repeat protein [Haemophilus parainfluenzae ATCC 33392]
gi|385188814|gb|EIF36287.1| Sel1 repeat protein [Haemophilus parainfluenzae HK262]
gi|386416739|gb|EIJ31231.1| Sel1 repeat protein [Haemophilus parainfluenzae HK2019]
Length = 214
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQP------ANAE---- 177
A +G A + GLMY D EAA +R+AA GD AQ A E
Sbjct: 56 ADQGDARAQYNLGLMYRNGNGIQDDVEAA-KWFRKAAENGDVKAQHNLGMMYAKGEGVEQ 114
Query: 178 ---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
EAVK +A+ G +R+QY L + + G GV + EAA+WY +AA+ GY A +N
Sbjct: 115 DYVEAVKWYRKAADQGGLRSQYSLGVMYYNGVGVKQDYVEAAKWYRKAADKGYTMAQFNL 174
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
L Y GEG+ + A++W+ +A D G K L +
Sbjct: 175 GLMYRDGEGVKQNRTVAKEWLGKACDSGDKKGCLYY 210
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
H G+ D+ LD + +G + A+ L++ A GD AQ
Sbjct: 21 HSTGLTNTPDQQLDQGFEAVKKGDY----------------QTALKLWKPLADQGDARAQ 64
Query: 173 ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+ EA K +A+ G V+AQ+ L + +G GV+ + EA +WY
Sbjct: 65 YNLGLMYRNGNGIQDDVEAAKWFRKAAENGDVKAQHNLGMMYAKGEGVEQDYVEAVKWYR 124
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+ G +R+ Y+ + Y G G+ + +A KW ++AAD G+ AQ GL ++ +GE
Sbjct: 125 KAADQGGLRSQYSLGVMYYNGVGVKQDYVEAAKWYRKAADKGYTMAQFNLGL-MYRDGEG 183
Query: 281 MK 282
+K
Sbjct: 184 VK 185
>gi|301765876|ref|XP_002918357.1| PREDICTED: protein sel-1 homolog 1-like [Ailuropoda melanoleuca]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|296215648|ref|XP_002754215.1| PREDICTED: protein sel-1 homolog 1 [Callithrix jacchus]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|444428802|ref|ZP_21224104.1| hypothetical protein B878_22457 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444237967|gb|ELU49604.1| hypothetical protein B878_22457 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 370
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ +A F K A +G A GLMY L Q +
Sbjct: 92 GVMYSHGRGVAQDDKQAFYWFHKAAEQGLPKAQYILGLMY-----------LNGQGVIQD 140
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D +A+ +A+ G V +QY L G+GV + ++A WY +AAE G
Sbjct: 141 D--------NQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDDKQAVYWYRKAAEQGL 192
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE-GEMMKAVVY 286
RA N + YS G G+ +QA W+ +AA+ G AQ H LG + G+ K VY
Sbjct: 193 ARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ--HNLGFMNQNGQDDKQAVY 250
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A +L G + +G+GV ++ ++A+ F K A +G ++ G +Y+
Sbjct: 116 AEQGLPKAQYIL--GLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGV 173
Query: 150 -MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQ 195
D K+A + YR+AA G AQ + ++AV L++A+ G AQ
Sbjct: 174 TQDDKQA-VYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ 232
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L G+ + ++A WY +AAE G RA N Y G+GL +QA W
Sbjct: 233 HNLGFMNQNGQ----DDKQAVYWYRKAAEQGLARAQSNLGFMYLHGQGLIQDDKQAVYWF 288
Query: 256 KRAADCGHGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAG 294
++AA G AQ H LGL + G+ + +A ++L LA G
Sbjct: 289 RKAAKQGFAIAQ--HNLGLVYLNGKGVTQDNAQAYMWLSLARHNG 331
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + N A+ R+A M G + +G+GV ++ +A+ + K A +G A
Sbjct: 137 VIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDDKQAVYWYRKAAEQGLARAQ 196
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ---------PANAEEAVKLLYQA 186
+ G+MY D+K+A L++ AA GD AQ + ++AV +A
Sbjct: 197 SNLGVMYSHGRGVAQDEKQAVYWLHK-AAEQGDAIAQHNLGFMNQNGQDDKQAVYWYRKA 255
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
+ G RAQ L G+G+ + ++A W+ +AA+ G+ A +N L Y G+G+
Sbjct: 256 AEQGLARAQSNLGFMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQ 315
Query: 247 SHRQARKWMKRAADCGH 263
+ QA W+ A G+
Sbjct: 316 DNAQAYMWLSLARHNGY 332
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ LAL G+G+ + ++A WY +AAE G A N + YS G G+ +
Sbjct: 47 GEANAQFNLALMYLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGVMYSHGRGVAQDDK 106
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
QA W +AA+ G KAQ GL ++ G+
Sbjct: 107 QAFYWFHKAAEQGLPKAQYILGL-MYLNGQ 135
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 120 NLDKALDSFLKG------------AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
+ DK D++ +G A +G A + LMY LY Q
Sbjct: 20 DFDKGFDAYNQGDFKTAYSEWFPLAEQGEANAQFNLALMY-----------LYGQGITQD 68
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D ++AV +A+ G AQ L + GRGV + ++A W+ +AAE G
Sbjct: 69 D--------KQAVYWYRKAAEQGDAIAQRNLGVMYSHGRGVAQDDKQAFYWFHKAAEQGL 120
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
+A Y L Y G+G+ QA W ++AA G G ++ LG
Sbjct: 121 PKAQYILGLMYLNGQGVIQDDNQAIYWFRKAA--GQGGVMSQYYLGF 165
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ +A+ K A +G +A + G M + A+ YR+AA G
Sbjct: 200 GVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHNLGFMNQNGQDDKQAVYWYRKAAEQG 259
Query: 168 DPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
AQ + ++AV +A+ G AQ+ L L G+GV + +
Sbjct: 260 LARAQSNLGFMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQ 319
Query: 215 AARWYLRAAEGGY--VRAMYNT 234
A W A GY + +NT
Sbjct: 320 AYMWLSLARHNGYKNTKENFNT 341
>gi|73964368|ref|XP_537530.2| PREDICTED: protein sel-1 homolog 1 [Canis lupus familiaris]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|380787275|gb|AFE65513.1| protein sel-1 homolog 1 isoform 1 precursor [Macaca mulatta]
gi|383410365|gb|AFH28396.1| protein sel-1 homolog 1 precursor [Macaca mulatta]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|402876881|ref|XP_003902180.1| PREDICTED: protein sel-1 homolog 1 [Papio anubis]
gi|355693487|gb|EHH28090.1| hypothetical protein EGK_18436 [Macaca mulatta]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|168333753|ref|ZP_02692003.1| Sel1-like repeat [Epulopiscium sp. 'N.t. morphotype B']
Length = 1016
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 83/200 (41%), Gaps = 37/200 (18%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPAN 175
G ++L+K+++ F K A G LA GL Y KK N
Sbjct: 688 GPTQDLEKSVEWFEKAANAGYALAQYQLGLCY----KKGLGTK---------------KN 728
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCL------------HRGRGVDFNLQEAARWYLRAA 223
A +A +A+ GH AQY LA+C H G G +LQ A WY +AA
Sbjct: 729 ATKAFSYFLKAAEQGHALAQYHLAMCYIKSDGVEKDLKWHYGDGAKRDLQNALTWYQKAA 788
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG----- 278
V A Y CY G G+ +A +W ++AA +G+AQL G + EG
Sbjct: 789 NQNVVEAQYQLGCCYKKGLGVETDIVKALEWFEKAAAMNYGEAQLVIG-NCYAEGTGVPK 847
Query: 279 EMMKAVVYLELATRAGETAA 298
++ AV Y E A + A
Sbjct: 848 SLLTAVEYWEKAAKQDSVEA 867
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
A+ + G +K G G +KN KA FLK A +G LA + Y + D E + +
Sbjct: 709 ALAQYQLGLCYKKGLGTKKNATKAFSYFLKAAEQGHALAQYHLAMCYIKSDGVEKDLKWH 768
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
GD A + + + A+ +A+ V AQYQL C +G GV+ ++ +A W+
Sbjct: 769 -----YGDGAKR--DLQNALTWYQKAANQNVVEAQYQLGCCYKKGLGVETDIVKALEWFE 821
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+AA Y A CY+ G G+P S A ++ ++AA
Sbjct: 822 KAAAMNYGEAQLVIGNCYAEGTGVPKSLLTAVEYWEKAA 860
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 28/177 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG----------------LMYWEMDKKE 154
+K G GV ++ KAL+ F K AA A + G + YWE K+
Sbjct: 803 YKKGLGVETDIVKALEWFEKAAAMNYGEAQLVIGNCYAEGTGVPKSLLTAVEYWEKAAKQ 862
Query: 155 AAISLYRQAAVLGDPAAQ-----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
++ +LG+ N AV+L A+ AQY++ALC GRGV+
Sbjct: 863 DSV---EAMFILGECYXMGWYGIEKNLFRAVELWEAAAAKRFAPAQYRMALCYKEGRGVE 919
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+L+++ + Y +AA GGYV A Y ++ + R+A KW ++AA+ HG++
Sbjct: 920 RDLKQSMKLYEKAASGGYVNAQYELAVMFEKKRDF----RKAAKWYEKAANXXHGES 972
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----------------WEM 150
G + G GV K+L A++ + K A + S AM G Y WE
Sbjct: 836 GNCYAEGTGVPKSLLTAVEYWEKAAKQDSVEAMFILGECYXMGWYGIEKNLFRAVELWEA 895
Query: 151 DKKEAAISL-YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+ YR A + + ++++KL +A+ G+V AQY+LA+ + R
Sbjct: 896 AAAKRFAPAQYRMALCYKEGRGVERDLKQSMKLYEKAASGGYVNAQYELAVMFEKKR--- 952
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ ++AA+WY +AA + +MY ++ Y G+G+ ++A + K+AAD + AQ
Sbjct: 953 -DFRKAAKWYEKAANXXHGESMYRLAVFYDDGKGVKKDVKKAMELYKKAADLKNSAAQF 1010
>gi|109084486|ref|XP_001105925.1| PREDICTED: protein sel-1 homolog 1-like [Macaca mulatta]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ Y
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYHLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|260753301|ref|YP_003226194.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552664|gb|ACV75610.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 233
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 165 VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
VLG+ A P + E+AV +A+ G +QY L GRGV + ++AA WY
Sbjct: 47 VLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYR 106
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+ +++A YN L Y G+GLP S A W ++AA+ G KAQ G+ + G
Sbjct: 107 KAADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGV-FYHNGRA 165
Query: 281 M-----KAVVYLELATRAG 294
+ +A+ ++E A G
Sbjct: 166 VPKNDARAIFWMEQAAHQG 184
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HGRG ++ +KA+ + K A +G + + G Y +D ++AA YR+
Sbjct: 49 GEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAF-WYRK 107
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AQ P + E A +A+ G +AQ+ L + H GR V
Sbjct: 108 AADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVP 167
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N A W +AA G V A ++ Y+ G+G P +A W ++AAD G+
Sbjct: 168 KNDARAIFWMEQAAHQGLVEAQMLLAMAYASGQGAPKDKEKAVFWYQKAADQGN 221
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG+ A+ L GRG + ++A WY +AA+ G + YN Y G G+ + +
Sbjct: 39 AGNSLAEEVLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDY 98
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKN 303
+A W ++AAD +AQ GL L+ +G+ + A + + A GE A
Sbjct: 99 EKAAFWYRKAADQNFIQAQYNLGL-LYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLG 157
Query: 304 VILQQLSATSRDRA 317
V A ++ A
Sbjct: 158 VFYHNGRAVPKNDA 171
>gi|426234313|ref|XP_004011140.1| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1 [Ovis
aries]
Length = 768
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 366 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 425
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 426 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 485
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 486 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 545
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 546 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 582
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 241 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 300
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 301 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 360
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 361 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 420
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 421 ADMGNPVGQ--SGLGM 434
>gi|283856195|ref|YP_161870.2| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|283775191|gb|AAV88759.2| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 233
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 165 VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
VLG+ A P + E+AV +A+ G +QY L GRGV + ++AA WY
Sbjct: 47 VLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAFWYR 106
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+ +++A YN L Y G+GLP S A W ++AA+ G KAQ G+ + G
Sbjct: 107 KAADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGV-FYHNGRA 165
Query: 281 M-----KAVVYLELATRAG 294
+ +A+ ++E A G
Sbjct: 166 VPKNDARAIFWMEQAAHQG 184
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + HGRG ++ +KA+ + K A +G + + G Y +D ++AA YR+
Sbjct: 49 GEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDYEKAAF-WYRK 107
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AQ P + E A +A+ G +AQ+ L + H GR V
Sbjct: 108 AADQNFIQAQYNLGLLYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLGVFYHNGRAVP 167
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N A W +AA G V A ++ Y+ G+G P +A W ++AAD G+
Sbjct: 168 KNDARAIFWMEQAAHQGLVEAQMLLAMAYASGQGAPKDKEKAVYWYQKAADQGN 221
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG+ A+ L GRG + ++A WY +AA+ G + YN Y G G+ + +
Sbjct: 39 AGNSLAEEVLGEAYAHGRGRPQDDEKAVYWYQKAADKGMKESQYNLGDAYLHGRGVGVDY 98
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKN 303
+A W ++AAD +AQ GL L+ +G+ + A + + A GE A
Sbjct: 99 EKAAFWYRKAADQNFIQAQYNLGL-LYVKGQGLPKSDEHAAFWWQKAAEQGEAKAQFNLG 157
Query: 304 VILQQLSATSRDRA 317
V A ++ A
Sbjct: 158 VFYHNGRAVPKNDA 171
>gi|388601080|ref|ZP_10159476.1| hypothetical protein VcamD_14460 [Vibrio campbellii DS40M4]
Length = 370
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ +G+G+ ++ +A+ + K A +G +A + G MY D K+A + +AA
Sbjct: 59 YLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGFMYLRGQGVTQDDKQA-FYWFHKAAE 117
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G P AQ + +A+ +A+ G V +QY L G+GV +
Sbjct: 118 QGLPKAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDD 177
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++A WY +AAE G RA N + YS G G+ +QA W+ +AA+ G AQ H L
Sbjct: 178 KQAVYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ--HNL 235
Query: 273 GLFTE-GEMMKAVVY 286
G + G+ K VY
Sbjct: 236 GFMNQNGQDYKQAVY 250
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A +L G + +G+GV ++ ++A+ F K A +G ++ G +Y+
Sbjct: 116 AEQGLPKAQYIL--GLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGV 173
Query: 150 -MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQ 195
D K+A + YR+AA G AQ + ++AV L++A+ G AQ
Sbjct: 174 TQDDKQA-VYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ 232
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L G+ + ++A WY +AAE G RA N L Y G+GL +QA W
Sbjct: 233 HNLGFMNQNGQ----DYKQAVYWYRKAAEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWF 288
Query: 256 KRAADCGHGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAG 294
++AA G AQ H LGL + G+ + +A ++L LA G
Sbjct: 289 RKAAKQGFAIAQ--HNLGLVYLNGKGVTQDNAQAYMWLSLARHNG 331
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 21/197 (10%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V + N A+ R+A M G + +G+GV ++ +A+ + K A +G A
Sbjct: 137 VIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDDKQAVYWYRKAAEQGLARAQ 196
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ------PANAEEAVKLLY---QA 186
+ G+MY D+K+A L++ AA GD AQ N ++ + +Y +A
Sbjct: 197 SNLGVMYSHGRGVAQDEKQAVYWLHK-AAEQGDAIAQHNLGFMNQNGQDYKQAVYWYRKA 255
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
+ G RAQ L L G+G+ + ++A W+ +AA+ G+ A +N L Y G+G+
Sbjct: 256 AEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQ 315
Query: 247 SHRQARKWMKRAADCGH 263
+ QA W+ A GH
Sbjct: 316 DNAQAYMWLSLARHNGH 332
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ LAL G+G+ + ++A WY +AAE G A N Y G+G+ +
Sbjct: 47 GEANAQFNLALMYLYGQGITQDDKQAVYWYRKAAEQGDAIAQRNLGFMYLRGQGVTQDDK 106
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
QA W +AA+ G KAQ GL ++ G+
Sbjct: 107 QAFYWFHKAAEQGLPKAQYILGL-MYLNGQ 135
>gi|300987532|ref|ZP_07178239.1| Sel1 repeat protein, partial [Escherichia coli MS 200-1]
gi|300306102|gb|EFJ60622.1| Sel1 repeat protein [Escherichia coli MS 200-1]
Length = 578
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 262 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 321
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 322 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 381
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 382 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 433
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 54/278 (19%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 168 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 221
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI------ 157
G +K L+ S L A +G +LA G MY+E D+ +
Sbjct: 222 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 281
Query: 158 -----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+LY + D N EA K A+ G+ AQY+LA
Sbjct: 282 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 341
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 342 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 401
Query: 267 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
Q H L++ E + KA+ + T+A + AD
Sbjct: 402 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 435
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 340 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 399
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 400 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 459
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + A WY +AA A + T+
Sbjct: 460 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLWSPEAQHQTAA 519
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 520 MYAQGTGTKIDNKQAWMWLTIAGN 543
>gi|419913972|ref|ZP_14432381.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
gi|388388000|gb|EIL49598.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
Length = 583
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 267 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 326
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 327 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 386
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 387 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 438
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 173 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 226
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 227 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 282
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 283 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 327
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 328 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 375
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 345 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 404
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 405 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 464
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 465 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 524
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 525 MYAQGTGTKIDNKQAWMWLTIAGN 548
>gi|422008297|ref|ZP_16355281.1| hypothetical protein OOC_09341 [Providencia rettgeri Dmel1]
gi|414094770|gb|EKT56433.1| hypothetical protein OOC_09341 [Providencia rettgeri Dmel1]
Length = 342
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV----DAGLMYWEMDKKEAAI 157
+ L W ++ G+ V K+ KA +L A + A+ A + ++ A
Sbjct: 152 LTLAYW---YEEGKAVTKDPQKAQKIYLALAEKNHPQALYLLGYQAAVGMYDKVNYPLAF 208
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
+ +AA LG AQ P N + A+K L QA+ G V AQ+ +AL R
Sbjct: 209 QYFTRAAELGFSPAQNSLGMLYLTGQGTPKNTQSAIKWLTQAAEQGEVSAQFNVALIYAR 268
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G G+ N +A W+++AA+ V A Y CY +G G+ ++A +W + AA GH
Sbjct: 269 GDGIKANQAKACHWFIKAAQQNSVDAQYAAGACYQYGMGVEADDKKALRWYQLAAAKGHE 328
Query: 265 KAQ 267
+A+
Sbjct: 329 RAE 331
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 173 PANAEEAVKLLYQASIA-----GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
PA AEEA L+ + ++ G AQ+ L + D +A WYL +A G+
Sbjct: 18 PAFAEEATPLINEKTLIALAEQGQAEAQFNLGMFYQSHHQFD----QALHWYLLSANQGF 73
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMM 281
+A N L Y G G+ L +Q WM RAA+ G Q+ +GL E
Sbjct: 74 TKAQINLGLMYQQGTGVKLDEKQMLHWMSRAAENGDPIGQMNMAEYTLYGLDNLLEKNPE 133
Query: 282 KAVVYLELATR 292
KA +LE A
Sbjct: 134 KAEQWLEKAAE 144
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ--- 172
D+AL +L A +G T A ++ GLMY + +D+K+ + R AA GDP Q
Sbjct: 58 FDQALHWYLLSANQGFTKAQINLGLMYQQGTGVKLDEKQMLHWMSR-AAENGDPIGQMNM 116
Query: 173 ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
N E+A + L +A+ A LA G+ V + Q+A + YL
Sbjct: 117 AEYTLYGLDNLLEKNPEKAEQWLEKAAEQHFQPAMLTLAYWYEEGKAVTKDPQKAQKIYL 176
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT 276
AE + +A+Y + G +++ A ++ RAA+ G AQ G+ G T
Sbjct: 177 ALAEKNHPQALYLLGYQAAVGMYDKVNYPLAFQYFTRAAELGFSPAQNSLGMLYLTGQGT 236
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVIL 306
A+ +L A GE +A NV L
Sbjct: 237 PKNTQSAIKWLTQAAEQGEVSAQF--NVAL 264
>gi|416337635|ref|ZP_11673998.1| hypothetical protein EcoM_03448 [Escherichia coli WV_060327]
gi|320194527|gb|EFW69158.1| hypothetical protein EcoM_03448 [Escherichia coli WV_060327]
Length = 649
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +AE +A Y Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMTMAINLLKAAADHGDIDAALVL 510
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 554
>gi|281351393|gb|EFB26977.1| hypothetical protein PANDA_006801 [Ailuropoda melanoleuca]
Length = 762
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 355 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 414
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 415 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 474
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 475 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 534
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 535 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 571
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 230 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 289
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 290 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 349
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 350 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 409
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 410 ADMGNPVGQ--SGLGM 423
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 422 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 469
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 470 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 503
>gi|432592981|ref|ZP_19829299.1| hypothetical protein A1SS_02399 [Escherichia coli KTE60]
gi|431127959|gb|ELE30251.1| hypothetical protein A1SS_02399 [Escherichia coli KTE60]
Length = 647
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCFHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 346
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 347 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 391
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 392 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 439
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|406660037|ref|ZP_11068172.1| Putative beta-lactamase hcpC precursor [Cecembia lonarensis LW9]
gi|405556171|gb|EKB51121.1| Putative beta-lactamase hcpC precursor [Cecembia lonarensis LW9]
Length = 445
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAAR-GSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAV 165
++ G GV+K++ K + S LK AA+ G+ A ++ G + + + LYR AA
Sbjct: 191 YQDGNGVQKDVQKGI-SLLKEAAQAGNPQAQLNLGFAFHYGNGVQKNYQETERLYRLAAD 249
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G PAA+ N EA +A+ G A++++ L + G GV +
Sbjct: 250 QGHPAAEFNMGILYRDGLSVQQNFAEAYNWFERAAKKGFANAEFEIGLLYYNGTGVKKDD 309
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EA +WYL+AAE Y A + + Y+ G G+ +A KW ++AA+ G+ AQL G+
Sbjct: 310 TEAVKWYLKAAEQEYTLAERSLGIMYANGYGVKKDDTEAVKWYRKAANKGNATAQLNLGI 369
Query: 273 GLFTEGEMMK 282
++ G +K
Sbjct: 370 -MYANGRGVK 378
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV+K+ +A+ +LK A + TLA G+MY
Sbjct: 296 GLLYYNGTGVKKDDTEAVKWYLKAAEQEYTLAERSLGIMY-------------------A 336
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + EAVK +A+ G+ AQ L + GRGV + EA +WY +AA+ G
Sbjct: 337 NGYGVKKDDTEAVKWYRKAANKGNATAQLNLGIMYANGRGVKRDYTEAVKWYRKAADQGN 396
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A N + Y+ G G+ + +A W K+AA G+ A+
Sbjct: 397 ASAQNNLGVMYARGTGVNKNENEAINWFKKAAAQGNVNAK 436
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
R A + D + ++ + LL +A+ AG+ +AQ L H G GV N QE R Y
Sbjct: 186 RLAGLYQDGNGVQKDVQKGISLLKEAAQAGNPQAQLNLGFAFHYGNGVQKNYQETERLYR 245
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
AA+ G+ A +N + Y G + + +A W +RAA G A+ E GL L+ G
Sbjct: 246 LAADQGHPAAEFNMGILYRDGLSVQQNFAEAYNWFERAAKKGFANAEFEIGL-LYYNGTG 304
Query: 281 MK 282
+K
Sbjct: 305 VK 306
>gi|354477646|ref|XP_003501030.1| PREDICTED: protein sel-1 homolog 1 isoform 2 [Cricetulus griseus]
Length = 744
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 337 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 396
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 397 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 456
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 457 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 516
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AVV YL LA + E A + IL Q AT
Sbjct: 517 KDGDYNAAVVQYLLLAEQGYEVAQSN-SAFILDQKEAT 553
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 212 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 271
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 272 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 331
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 332 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 391
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 392 ADMGNPVGQ--SGLGM 405
>gi|344274094|ref|XP_003408853.1| PREDICTED: protein sel-1 homolog 1 [Loxodonta africana]
Length = 792
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 385 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 444
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 445 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 504
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 505 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMAAYNSY 564
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 565 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 601
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 260 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 319
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 320 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 379
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 380 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 439
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 440 ADMGNPVGQ--SGLGM 453
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 31/142 (21%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 452 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 499
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV----------DFNLQEAAR 217
+ ++A+K AS GH+ A Y LA G GV N+ E R
Sbjct: 500 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGR 552
Query: 218 WY--LRAAEGGYVRAMYNTSLC 237
W L AA Y YN ++
Sbjct: 553 WSERLMAAYNSYKDGDYNAAVI 574
>gi|422377178|ref|ZP_16457421.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|324011515|gb|EGB80734.1| DnaJ domain protein [Escherichia coli MS 60-1]
Length = 647
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 54/278 (19%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI------ 157
G +K L+ S L A +G +LA G MY+E D+ +
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 350
Query: 158 -----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+LY + D N EA K A+ G+ AQY+LA
Sbjct: 351 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 410
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 411 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 470
Query: 267 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
Q H L++ E + KA+ + T+A + AD
Sbjct: 471 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 504
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + A WY +AA A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLWSPEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|332634806|ref|NP_001193837.1| protein sel-1 homolog 1 precursor [Bos taurus]
gi|296482865|tpg|DAA24980.1| TPA: sel-1 suppressor of lin-12-like [Bos taurus]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYSSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDSNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|420157155|ref|ZP_14663995.1| Sel1 repeat protein [Clostridium sp. MSTE9]
gi|394757165|gb|EJF40224.1| Sel1 repeat protein [Clostridium sp. MSTE9]
Length = 1125
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W + + L G R+K G GV+++ KA + + + A G++ +V+ G Y
Sbjct: 910 WYQLAAEQEDGIALNTLGNRYKDGNGVKQDYKKAFELYERAVAAGNSAGLVNLGRAYRYG 969
Query: 151 DKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ E + E+AV L QA G A LA C G+GV
Sbjct: 970 EGVEKDL-------------------EKAVSLFRQAVEKGRDVAYGNLADCYETGQGVKQ 1010
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA R YL AE G AM++ Y G G+P QA +W ++AA+ G AQ +
Sbjct: 1011 DFAEAMRLYLLGAEHGDESAMFSIGNLYENGMGVPKDFAQAAEWYRKAAE--EGDAQSCY 1068
Query: 271 GLGLFTE---GEMMKAVVYLELATRAGETAADHVKNVI 305
LG+F E G +EL +A E ++ K V+
Sbjct: 1069 RLGVFYEKGAGVKQDTDKAIELYRQAAELGYENAKTVL 1106
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G GV ++ +KA++ + A +G+ A + G Y+ + E A+ Y +AA
Sbjct: 714 YECGEGVEEDKEKAMELYRLSAEQGNARAQCNLGFFYYHGIAVEEDNEQAVYWYSKAAEQ 773
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ N E AV+L A H AQ L C G GV+ +
Sbjct: 774 GYTRAQHLLGVCYEHGWGVERNPERAVELYQIAVKKNHQVAQCDLGWCYEFGVGVEKDET 833
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----- 268
+A Y +AE GY RA N CY FG G+ QA W ++A+ H +AQ
Sbjct: 834 KAVELYRLSAEQGYPRAQSNLGDCYYFGTGIEEDKDQAFYWFSKSAEQEHPRAQFWMGQC 893
Query: 269 -EHGLGLFTEGEMMKAVVYLELATR 292
E G G TE + KA+ + +LA
Sbjct: 894 YERGHG--TEKNLEKAIHWYQLAAE 916
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
A LL G+ +++G GV + KA++ + A +G T A + G Y+ I +
Sbjct: 526 AQCLL--GECYENGYGVETDKAKAMELYRLAAEQGHTPAQCNLGFFYY------IGIGI- 576
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
N EEAV+ +A+ + RAQ L C G GV+ +L A +Y
Sbjct: 577 ------------EENNEEAVRWFTKAADKNYPRAQNLLGECYENGYGVERDLTRAREFYH 624
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+AAE GY A N Y +G + + H +A +W +AAD GH +AQ
Sbjct: 625 KAAEQGYAPAQCNLGNFYYYGVMVDVDHEEAVRWFTKAADQGHPRAQ 671
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +++G GV ++L +A + + K A +G A + G Y+ V+
Sbjct: 603 GECYENGYGVERDLTRAREFYHKAAEQGYAPAQCNLGNFYY--------------YGVMV 648
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D + EEAV+ +A+ GH RAQ L +C +G GV+ N A Y AA
Sbjct: 649 D-----VDHEEAVRWFTKAADQGHPRAQRMLGMCYAQGYGVEENQARAVELYRLAAAKKD 703
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 283
A + LCY GEG+ +A + + +A+ G+ +AQ G G+ E + +A
Sbjct: 704 SDAQCDLGLCYECGEGVEEDKEKAMELYRLSAEQGNARAQCNLGFFYYHGIAVEEDNEQA 763
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRD 315
V + A G T A H+ V + R+
Sbjct: 764 VYWYSKAAEQGYTRAQHLLGVCYEHGWGVERN 795
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ F++G GV K+ D+A++ + + A A GL+Y E D E AI+ + +
Sbjct: 207 GECFEYGYGVEKDTDRAVELYRQSAELDFAPAQTRLGLIYLYALGVERD-AEQAITWFNK 265
Query: 163 AA---------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA VLG+ + E+A +L ++ G+ AQ L + G GV
Sbjct: 266 AAEQEYPQAWCVLGECYENGWGTEQDQEKARELYLLSAEQGYAPAQCNLGYLYYTGTGVK 325
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EAARW+ +AAE + RA LCY G G+ +A + + + + G+ AQ
Sbjct: 326 EDNEEAARWFSKAAEKKHPRAQCLLGLCYENGYGVEEDKAKAAELYRLSGEQGYAPAQCN 385
Query: 270 HGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
G +T E +AV + A G A H+ + + RD A
Sbjct: 386 LGYFYYTGVGVEENNEEAVNWFSKAAEQGYPRARHLLGICYENGYGVERDPA 437
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 19/185 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQA 163
G + G GV +N ++A++ F K A +G A G+ Y + +++ A A LY+ A
Sbjct: 387 GYFYYTGVGVEENNEEAVNWFSKAAEQGYPRARHLLGICYENGYGVERDPARAAELYQAA 446
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P A+ A + E+AV+L ++ G+ AQ L C + GV+
Sbjct: 447 AEQEYPDARCALGVLYEYGMGVEQDKEKAVELYRASAEQGYAPAQCNLGYCYYSAIGVEE 506
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA RW+ +AAE + RA CY G G+ +A + + AA+ GH AQ
Sbjct: 507 DNEEAVRWFSKAAEQNFPRAQCLLGECYENGYGVETDKAKAMELYRLAAEQGHTPAQC-- 564
Query: 271 GLGLF 275
LG F
Sbjct: 565 NLGFF 569
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ +++G G ++ +KA + +L A +G A + G +Y+ + D +EAA + +
Sbjct: 279 GECYENGWGTEQDQEKARELYLLSAEQGYAPAQCNLGYLYYTGTGVKEDNEEAA-RWFSK 337
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA P AQ + +A +L + G+ AQ L + G GV+
Sbjct: 338 AAEKKHPRAQCLLGLCYENGYGVEEDKAKAAELYRLSGEQGYAPAQCNLGYFYYTGVGVE 397
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
N +EA W+ +AAE GY RA + +CY G G+ +A + + AA+ + A+
Sbjct: 398 ENNEEAVNWFSKAAEQGYPRARHLLGICYENGYGVERDPARAAELYQAAAEQEYPDARCA 457
Query: 268 ----LEHGLGLFTEGEMMKAV 284
E+G+G+ E + KAV
Sbjct: 458 LGVLYEYGMGV--EQDKEKAV 476
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + HG V ++ ++A+ + K A +G T A G+ Y W +++ E A+ LY+ A
Sbjct: 747 GFFYYHGIAVEEDNEQAVYWYSKAAEQGYTRAQHLLGVCYEHGWGVERNPERAVELYQIA 806
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AQ + +AV+L ++ G+ RAQ L C + G G++
Sbjct: 807 VKKNHQVAQCDLGWCYEFGVGVEKDETKAVELYRLSAEQGYPRAQSNLGDCYYFGTGIEE 866
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A W+ ++AE + RA + CY G G + +A W + A A+ E
Sbjct: 867 DKDQAFYWFSKSAEQEHPRAQFWMGQCYERGHGTEKNLEKAIHWYQLA-------AEQED 919
Query: 271 GLGLFTEGEMMK 282
G+ L T G K
Sbjct: 920 GIALNTLGNRYK 931
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPA 170
G +++ +KA F + A +G A + G Y E D E A+SLYR+AA P+
Sbjct: 71 GAKQDYEKAFYWFQQAAEQGDVSAQYNLGACYENGIGVEQDY-EKAVSLYREAADQDFPS 129
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
AQ A L LC G+GV+ + +A YL +AE Y A
Sbjct: 130 AQCA-----------------------LGLCYEIGQGVEMDKDKAMELYLLSAEQDYAPA 166
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
N Y G + QA W ++A+ + +AQ E+G G+
Sbjct: 167 QCNLGFFYYHGIAVEEDDAQAVAWFTKSAEQEYPRAQFLLGECFEYGYGV 216
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 53/215 (24%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA---------- 155
++ G+GV + DKA++ +L A + A + G Y+ E D +A
Sbjct: 138 YEIGQGVEMDKDKAMELYLLSAEQDYAPAQCNLGFFYYHGIAVEEDDAQAVAWFTKSAEQ 197
Query: 156 -------------------------AISLYRQAAVLGDPAAQ-------------PANAE 177
A+ LYRQ+A L AQ +AE
Sbjct: 198 EYPRAQFLLGECFEYGYGVEKDTDRAVELYRQSAELDFAPAQTRLGLIYLYALGVERDAE 257
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A+ +A+ + +A L C G G + + ++A YL +AE GY A N
Sbjct: 258 QAITWFNKAAEQEYPQAWCVLGECYENGWGTEQDQEKARELYLLSAEQGYAPAQCNLGYL 317
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y G G+ + +A +W +AA+ H +AQ GL
Sbjct: 318 YYTGTGVKEDNEEAARWFSKAAEKKHPRAQCLLGL 352
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 192 VRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ A++QLALC +RG G + ++A W+ +AAE G V A YN CY G G+ + +
Sbjct: 55 LEAKHQLALCYYRGTGGAKQDYEKAFYWFQQAAEQGDVSAQYNLGACYENGIGVEQDYEK 114
Query: 251 ARKWMKRAADCGHGKAQLEHGL 272
A + AAD AQ GL
Sbjct: 115 AVSLYREAADQDFPSAQCALGL 136
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+A QA+ G V AQY L C G GV+ + ++A Y AA+ + A L
Sbjct: 77 EKAFYWFQQAAEQGDVSAQYNLGACYENGIGVEQDYEKAVSLYREAADQDFPSAQCALGL 136
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
CY G+G+ + +A + +A+ + AQ G G+ E + +AV +
Sbjct: 137 CYEIGQGVEMDKDKAMELYLLSAEQDYAPAQCNLGFFYYHGIAVEEDDAQAVAWF 191
>gi|26248017|ref|NP_754057.1| hypothetical protein c2163 [Escherichia coli CFT073]
gi|227885812|ref|ZP_04003617.1| TPR repeat-containing protein [Escherichia coli 83972]
gi|300994373|ref|ZP_07180878.1| DnaJ domain protein [Escherichia coli MS 45-1]
gi|301050897|ref|ZP_07197748.1| DnaJ domain protein [Escherichia coli MS 185-1]
gi|386629456|ref|YP_006149176.1| hypothetical protein i02_1982 [Escherichia coli str. 'clone D i2']
gi|386634376|ref|YP_006154095.1| hypothetical protein i14_1982 [Escherichia coli str. 'clone D i14']
gi|386639289|ref|YP_006106087.1| putative TPR repeat protein [Escherichia coli ABU 83972]
gi|422366869|ref|ZP_16447326.1| DnaJ domain protein [Escherichia coli MS 153-1]
gi|432411980|ref|ZP_19654646.1| hypothetical protein WG9_02459 [Escherichia coli KTE39]
gi|432436068|ref|ZP_19678461.1| hypothetical protein A13M_01776 [Escherichia coli KTE188]
gi|432456791|ref|ZP_19698978.1| hypothetical protein A15C_02577 [Escherichia coli KTE201]
gi|432495825|ref|ZP_19737624.1| hypothetical protein A173_02984 [Escherichia coli KTE214]
gi|432504491|ref|ZP_19746221.1| hypothetical protein A17E_01544 [Escherichia coli KTE220]
gi|432523866|ref|ZP_19760998.1| hypothetical protein A17Y_01978 [Escherichia coli KTE230]
gi|432568758|ref|ZP_19805276.1| hypothetical protein A1SE_02338 [Escherichia coli KTE53]
gi|432607588|ref|ZP_19843777.1| hypothetical protein A1U7_02586 [Escherichia coli KTE67]
gi|432651199|ref|ZP_19886956.1| hypothetical protein A1W7_02200 [Escherichia coli KTE87]
gi|432783643|ref|ZP_20017824.1| hypothetical protein A1SY_02482 [Escherichia coli KTE63]
gi|432978366|ref|ZP_20167188.1| hypothetical protein A15S_04281 [Escherichia coli KTE209]
gi|432995425|ref|ZP_20184036.1| hypothetical protein A17A_02508 [Escherichia coli KTE218]
gi|433000001|ref|ZP_20188531.1| hypothetical protein A17K_02335 [Escherichia coli KTE223]
gi|433058149|ref|ZP_20245208.1| hypothetical protein WIM_01918 [Escherichia coli KTE124]
gi|433087296|ref|ZP_20273680.1| hypothetical protein WIY_01744 [Escherichia coli KTE137]
gi|433115614|ref|ZP_20301418.1| hypothetical protein WKA_01803 [Escherichia coli KTE153]
gi|433125251|ref|ZP_20310826.1| hypothetical protein WKE_01747 [Escherichia coli KTE160]
gi|433139314|ref|ZP_20324585.1| hypothetical protein WKM_01595 [Escherichia coli KTE167]
gi|433149262|ref|ZP_20334298.1| hypothetical protein WKQ_01913 [Escherichia coli KTE174]
gi|433212566|ref|ZP_20396169.1| hypothetical protein WI3_01745 [Escherichia coli KTE99]
gi|442604425|ref|ZP_21019270.1| FIG00642536: hypothetical protein [Escherichia coli Nissle 1917]
gi|26108420|gb|AAN80622.1|AE016761_197 Hypothetical protein c2163 [Escherichia coli CFT073]
gi|227837385|gb|EEJ47851.1| TPR repeat-containing protein [Escherichia coli 83972]
gi|300297416|gb|EFJ53801.1| DnaJ domain protein [Escherichia coli MS 185-1]
gi|300406219|gb|EFJ89757.1| DnaJ domain protein [Escherichia coli MS 45-1]
gi|307553781|gb|ADN46556.1| putative TPR repeat protein [Escherichia coli ABU 83972]
gi|315290465|gb|EFU49840.1| DnaJ domain protein [Escherichia coli MS 153-1]
gi|355420355|gb|AER84552.1| hypothetical protein i02_1982 [Escherichia coli str. 'clone D i2']
gi|355425275|gb|AER89471.1| hypothetical protein i14_1982 [Escherichia coli str. 'clone D i14']
gi|430935206|gb|ELC55528.1| hypothetical protein WG9_02459 [Escherichia coli KTE39]
gi|430964490|gb|ELC81937.1| hypothetical protein A13M_01776 [Escherichia coli KTE188]
gi|430982673|gb|ELC99362.1| hypothetical protein A15C_02577 [Escherichia coli KTE201]
gi|431024368|gb|ELD37533.1| hypothetical protein A173_02984 [Escherichia coli KTE214]
gi|431039474|gb|ELD50294.1| hypothetical protein A17E_01544 [Escherichia coli KTE220]
gi|431052968|gb|ELD62604.1| hypothetical protein A17Y_01978 [Escherichia coli KTE230]
gi|431100609|gb|ELE05579.1| hypothetical protein A1SE_02338 [Escherichia coli KTE53]
gi|431138686|gb|ELE40498.1| hypothetical protein A1U7_02586 [Escherichia coli KTE67]
gi|431191068|gb|ELE90453.1| hypothetical protein A1W7_02200 [Escherichia coli KTE87]
gi|431329511|gb|ELG16797.1| hypothetical protein A1SY_02482 [Escherichia coli KTE63]
gi|431480538|gb|ELH60257.1| hypothetical protein A15S_04281 [Escherichia coli KTE209]
gi|431507138|gb|ELH85424.1| hypothetical protein A17A_02508 [Escherichia coli KTE218]
gi|431510018|gb|ELH88265.1| hypothetical protein A17K_02335 [Escherichia coli KTE223]
gi|431570792|gb|ELI43700.1| hypothetical protein WIM_01918 [Escherichia coli KTE124]
gi|431607016|gb|ELI76387.1| hypothetical protein WIY_01744 [Escherichia coli KTE137]
gi|431635140|gb|ELJ03355.1| hypothetical protein WKA_01803 [Escherichia coli KTE153]
gi|431646636|gb|ELJ14128.1| hypothetical protein WKE_01747 [Escherichia coli KTE160]
gi|431661692|gb|ELJ28504.1| hypothetical protein WKM_01595 [Escherichia coli KTE167]
gi|431671926|gb|ELJ38199.1| hypothetical protein WKQ_01913 [Escherichia coli KTE174]
gi|431734848|gb|ELJ98224.1| hypothetical protein WI3_01745 [Escherichia coli KTE99]
gi|441714682|emb|CCQ05247.1| FIG00642536: hypothetical protein [Escherichia coli Nissle 1917]
Length = 647
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 346
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 347 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 391
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 392 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 439
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|254472523|ref|ZP_05085923.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
JE062]
gi|211958806|gb|EEA94006.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
JE062]
Length = 601
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ ++ G GV ++ ++AL +++ A +G A + +MY D EAA + Y
Sbjct: 337 GRIYEIGLGVDQDYNEALKWYIRAAEQGVVDAQYNLAVMYANGTGISQDLAEAA-AWYHF 395
Query: 163 AAVLGDPAAQ----------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
AA G P AQ A A V+L A+ GH AQY++ G
Sbjct: 396 AAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRL---AANQGHAEAQYRIGRAYEDGV 452
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV+ N EAA WY AA + +A + Y+ G G+P +A KW+ AA+ G+ +A
Sbjct: 453 GVEQNHTEAANWYYLAATQNHAKAQFALGRVYAIGLGVPQDEVEAAKWVLHAAERGYLEA 512
Query: 267 QLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
Q GL + + + +A ++ +A G A V+ L+A ++A
Sbjct: 513 QYRIGLAFYKGSGVKQNIERAYIWFYIAAENGSKPALKVQKEAADHLNANEIEQA 567
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ F +G G +N KA + F A +G A + G +Y +G
Sbjct: 301 GRTFTNGIGTSQNYPKAAEKFRLAAEQGHANAQFNLGRIY-----------------EIG 343
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q N EA+K +A+ G V AQY LA+ G G+ +L EAA WY AA+ G+
Sbjct: 344 LGVDQDYN--EALKWYIRAAEQGVVDAQYNLAVMYANGTGISQDLAEAAAWYHFAAKQGH 401
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A YN Y+ G+G+ A +W++ AA+ GH +AQ E G+G+
Sbjct: 402 PDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGV 454
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQY+LAL H G+GV + EA +WY RAA G+ A Y+ G+G+ ++
Sbjct: 148 GYASAQYRLALLFHDGKGVPKDYSEAEKWYRRAASNGHSGAQLELGYMYANGQGVQQDYQ 207
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA----DH 300
+A KW +AA G+ AQLE G ++ +G + KA + LA G A D
Sbjct: 208 EAEKWYLKAAKQGNADAQLELGH-IYADGRGVSRDYEKAKEWYVLAASQGNMGAHRSLDQ 266
Query: 301 VKNV 304
+ N+
Sbjct: 267 ISNL 270
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 37/161 (22%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
S Y+ + + P + +A A+ GHV AQY+LA H+GRGV + +EA +
Sbjct: 44 SQYKLGILYEEAQGVPQDYTKAANWFRLAAEQGHVSAQYRLADLYHKGRGVPQSFKEAEK 103
Query: 218 WY------------------------------------LRAAEGGYVRAMYNTSLCYSFG 241
WY L A+ GY A Y +L + G
Sbjct: 104 WYQLAADKGHPKALSELEYLFNKGLIGPQSDDKVTMWTLHKAKQGYASAQYRLALLFHDG 163
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+G+P + +A KW +RAA GH AQLE G ++ G+ ++
Sbjct: 164 KGVPKDYSEAEKWYRRAASNGHSGAQLELGY-MYANGQGVQ 203
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
PA AE+ K + ++ G +QY+L + +GV + +AA W+ AAE G+V A Y
Sbjct: 24 PAYAED-FKTISASAEQGDFHSQYKLGILYEEAQGVPQDYTKAANWFRLAAEQGHVSAQY 82
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QLEHGLGLFTEG 278
+ Y G G+P S ++A KW + AAD GH KA +LE+ LF +G
Sbjct: 83 RLADLYHKGRGVPQSFKEAEKWYQLAADKGHPKALSELEY---LFNKG 127
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 112/284 (39%), Gaps = 35/284 (12%)
Query: 68 VLNKIAASFTLPQLRAASL------VCKSWNDALRPLREAM------VLLRWGKRFKHGR 115
L+K + Q R A L V K +++A + R A L G + +G+
Sbjct: 141 TLHKAKQGYASAQYRLALLFHDGKGVPKDYSEAEKWYRRAASNGHSGAQLELGYMYANGQ 200
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAA 171
GV+++ +A +LK A +G+ A ++ G +Y + E A Y AA G+ A
Sbjct: 201 GVQQDYQEAEKWYLKAAKQGNADAQLELGHIYADGRGVSRDYEKAKEWYVLAASQGNMGA 260
Query: 172 -----QPANAEEAVKLLYQASIAGHVRA---------QYQLALCLHRGRGVDFNLQEAAR 217
Q +N E +K Y A IA R Y L G G N +AA
Sbjct: 261 HRSLDQISNLGEDLKQHY-ADIAKDYRKAAEKHLAGFHYSLGRTFTNGIGTSQNYPKAAE 319
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLG 273
+ AAE G+ A +N Y G G+ + +A KW RAA+ G AQ + G
Sbjct: 320 KFRLAAEQGHANAQFNLGRIYEIGLGVDQDYNEALKWYIRAAEQGVVDAQYNLAVMYANG 379
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
++ +A + A + G A + + +D A
Sbjct: 380 TGISQDLAEAAAWYHFAAKQGHPDAQYNLGFLYATGQGVEQDEA 423
>gi|188494876|ref|ZP_03002146.1| putative TPR repeat protein [Escherichia coli 53638]
gi|432369883|ref|ZP_19612972.1| hypothetical protein WCM_03830 [Escherichia coli KTE10]
gi|432485514|ref|ZP_19727430.1| hypothetical protein A15Y_01993 [Escherichia coli KTE212]
gi|432670841|ref|ZP_19906372.1| hypothetical protein A1Y7_02377 [Escherichia coli KTE119]
gi|433173623|ref|ZP_20358158.1| hypothetical protein WGQ_01885 [Escherichia coli KTE232]
gi|188490075|gb|EDU65178.1| putative TPR repeat protein [Escherichia coli 53638]
gi|430885510|gb|ELC08381.1| hypothetical protein WCM_03830 [Escherichia coli KTE10]
gi|431015911|gb|ELD29458.1| hypothetical protein A15Y_01993 [Escherichia coli KTE212]
gi|431210915|gb|ELF08898.1| hypothetical protein A1Y7_02377 [Escherichia coli KTE119]
gi|431693889|gb|ELJ59283.1| hypothetical protein WGQ_01885 [Escherichia coli KTE232]
Length = 647
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A G+MY + + IS R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNIIDAQYALGIMYSDGRGTDKNISEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNASAQYKLARISRFADEPLRNYEEALQWYLSAATQGHDLAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLYAQYHTARLYSESESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 93/230 (40%), Gaps = 51/230 (22%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV---CKSWNDALRPLREAMVLLRW--GKRF-----KH 113
FD VLNK+A F L A L+ SW R+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIEYLSYSW-------RKEKMIRKWKLTERFNNLAMQH 288
Query: 114 GRGVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR 161
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 289 HSGYKKLLNAIKLKGLFYYPSSVFQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL-- 346
Query: 162 QAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
A +A+ + AQY L + GRG D N+ EA +W+L
Sbjct: 347 -----------------AFNWFTRAAQHNIIDAQYALGIMYSDGRGTDKNISEARKWFLL 389
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
AA+ G A Y + F + ++ +A +W AA GH AQ E G
Sbjct: 390 AAQNGNASAQYKLARISRFADEPLRNYEEALQWYLSAATQGHDLAQYELG 439
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G+ + G GV ++ +A FL+ A +G A +Y E + +E A+ + +A
Sbjct: 439 GQMYIQGIGVERDEVQAHRWFLQSAEQGYLYAQYHTARLYSESESIPQDQEKALYWFTKA 498
Query: 164 AVLGDPAA----------------QPANAEEAVKLLYQASIAGHVRAQYQLA-LCLHRGR 206
A G A P N EA++ L A+ G + A + LA + L+ +
Sbjct: 499 AKNGADGAGDAMYELGKYYLTNNDDPENNAEAIQWLTGAAQRGRIEAIFLLAEMYLYGTK 558
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ + A WY +AA G A + T+ Y+ G G + ++QA W+ A +
Sbjct: 559 DIAKDENHALHWYEKAARLGSTEAQHQTAAMYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|191171759|ref|ZP_03033306.1| putative TPR repeat protein [Escherichia coli F11]
gi|432471063|ref|ZP_19713110.1| hypothetical protein A15M_01944 [Escherichia coli KTE206]
gi|432713474|ref|ZP_19948515.1| hypothetical protein WCI_01839 [Escherichia coli KTE8]
gi|433077844|ref|ZP_20264395.1| hypothetical protein WIU_01715 [Escherichia coli KTE131]
gi|190908089|gb|EDV67681.1| putative TPR repeat protein [Escherichia coli F11]
gi|430998281|gb|ELD14522.1| hypothetical protein A15M_01944 [Escherichia coli KTE206]
gi|431257277|gb|ELF50201.1| hypothetical protein WCI_01839 [Escherichia coli KTE8]
gi|431597515|gb|ELI67421.1| hypothetical protein WIU_01715 [Escherichia coli KTE131]
Length = 647
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 54/278 (19%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI------ 157
G +K L+ S L A +G +LA G MY+E D+ +
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 350
Query: 158 -----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+LY + D N EA K A+ G+ AQY+LA
Sbjct: 351 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 410
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 411 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 470
Query: 267 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
Q H L++ E + KA+ + T+A + AD
Sbjct: 471 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 504
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + A WY +AA A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLWSPEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|294661164|ref|YP_003573039.1| hypothetical protein Aasi_1584 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336314|gb|ACP20911.1| hypothetical protein Aasi_1584 [Candidatus Amoebophilus asiaticus
5a2]
Length = 185
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+++GRGV K+ KA++ + K A +G A G MY D I
Sbjct: 3 GQRYENGRGVTKDYVKAVEWYQKAAKQGDAEAQYILGCMY---DDGRGVIK--------- 50
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ ++A K +A+ G+ +AQ+ L + G+G+ + ++A WY +AAE G+
Sbjct: 51 -------DEQKAFKWYQKAAGQGYAKAQFNLGVSYANGQGIAEDEKKAVEWYQKAAEQGH 103
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V A YN + Y G G+ +++QA W + A + G AQ
Sbjct: 104 VGAQYNLGVIYEGGMGIKQNYKQAVSWYQAATEKGSPIAQ 143
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV+ +A+ G AQY L GRGV + Q+A +WY +AA GY +A +N +
Sbjct: 18 KAVEWYQKAAKQGDAEAQYILGCMYDDGRGVIKDEQKAFKWYQKAAGQGYAKAQFNLGVS 77
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM------MKAVVYLELAT 291
Y+ G+G+ ++A +W ++AA+ GH AQ + LG+ EG M +AV + + AT
Sbjct: 78 YANGQGIAEDEKKAVEWYQKAAEQGHVGAQ--YNLGVIYEGGMGIKQNYKQAVSWYQAAT 135
Query: 292 RAG 294
G
Sbjct: 136 EKG 138
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV + +A WY +AA+ G A Y Y G G+ ++A KW ++AA G
Sbjct: 7 ENGRGVTKDYVKAVEWYQKAAKQGDAEAQYILGCMYDDGRGVIKDEQKAFKWYQKAAGQG 66
Query: 263 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQ 307
+ KAQ G+ + G+ + KAV + + A G A + VI +
Sbjct: 67 YAKAQFNLGVS-YANGQGIAEDEKKAVEWYQKAAEQGHVGAQYNLGVIYE 115
>gi|403676044|ref|ZP_10938109.1| hypothetical protein ANCT1_15381 [Acinetobacter sp. NCTC 10304]
Length = 288
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y + A Y +AA GD A
Sbjct: 76 KDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNGYIKPDYVKAKYWYEKAAAQGDIA 135
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ + ++A K A+ AG AQ LA GRGV N EA++
Sbjct: 136 SLNKLGNFYSKGLGIKQDYQKATKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 195
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ G AQ G G
Sbjct: 196 WYLKAAVQGDIDAQYNLGLMYLLGDGIKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDG 255
Query: 274 LFTEGEMMKAVVYLELATRAGETAA 298
L + + A ++ E + G + A
Sbjct: 256 LGVDKNLSLARIWFEKSAEVGNSYA 280
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + + L + G + G G++++ KA +L A G + A + M+
Sbjct: 121 AKYWYEKAAAQGDIASLNKLGNFYSKGLGIKQDYQKATKYYLDAANAGDSDAQTNLATMF 180
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ G Q N EA + +A++ G + AQY L L G G
Sbjct: 181 -----------------LHGRGVTQ--NKLEASQWYLKAAVQGDIDAQYNLGLMYLLGDG 221
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + +A +W+L AA G A Y+ Y G G+ + AR W +++A+ G+ A
Sbjct: 222 IKQDYAQAQKWFLSAANQGESNAQYHLGKIYKDGLGVDKNLSLARIWFEKSAEVGNSYAA 281
Query: 268 LE 269
E
Sbjct: 282 QE 283
>gi|338814246|ref|ZP_08626276.1| hypothetical protein ALO_18502 [Acetonema longum DSM 6540]
gi|337273767|gb|EGO62374.1| hypothetical protein ALO_18502 [Acetonema longum DSM 6540]
Length = 707
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 85 SLVCKSWNDALRPLR-EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
S K W A + +A LL G + G GV +N AL+ F K A +G A V
Sbjct: 426 SEAVKLWEQAAKQNHVQAQYLL--GLSYFDGTGVVRNYATALEWFKKAADQGYLEAQVQL 483
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
G MY ++ A S N EA+K +A+ H +QY L C
Sbjct: 484 GYMY---ERGLGATS----------------NLAEAMKWYQKAAEQQHSWSQYYLGTCYE 524
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G+GV+ N +A WY +AA GY A Y G G+P ++ +A KW ++A + G
Sbjct: 525 TGKGVEKNYAKAFEWYQKAAASGYSSAFAKMGNVYYSGYGVPKNYDEAMKWYQKAVEKGD 584
Query: 264 --GKAQLEHGLGLFTEGEMMKAVV 285
G+ GL FT + K+ V
Sbjct: 585 PTGEGHYYLGLAYFTGNGVKKSPV 608
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + HG GV ++ +A+ + K A +G A L Y + E A+ R+A
Sbjct: 235 GGAYAHGYGVPRDPAEAVKYWRKAAEQGYVPAQYMLALSYADGYGGNKDPEEALLWCRKA 294
Query: 164 AVLGDPAAQ----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A G AQ E VK +A+ AG +QY+L + G+G+ +
Sbjct: 295 ADQGHIQAQFLLGRAYFYSKKEYAEGVKWWQRAASAGEKESQYELGIAYQLGKGIAQDDV 354
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
E+ +W+ +AAE G+ A + Y +G+G+P + QA W+K++AD G+G AQ+ G+
Sbjct: 355 ESVKWFQKAAEQGHPDAQHMLGRAYYYGKGVPKDYSQAAHWLKQSADQGNGWAQVTLGV- 413
Query: 274 LFTEG 278
L+ G
Sbjct: 414 LYRNG 418
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK +A+ GH+ AQY L G G+D N EAA+W+ ++AE G++ Y
Sbjct: 70 EAVKWWRKAAEQGHMDAQYVLGNAAIFGYGMDRNPVEAAKWWRKSAEQGHISGQYTIGNA 129
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
Y +GEG+ +A +W K AA GHG AQ G+ G+ E + +AV + + A
Sbjct: 130 YMYGEGVKKDPTEAVRWWKEAAAQGHGGAQYVLGMAYNDGIGVEQDFTEAVRWWQKAVE 188
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G+GV K+ +A + A +G+ A V G+ LYR +
Sbjct: 376 GRAYYYGKGVPKDYSQAAHWLKQSADQGNGWAQVTLGV-------------LYRNGYGVA 422
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N EAVKL QA+ HV+AQY L L G GV N A W+ +AA+ GY
Sbjct: 423 N------NDSEAVKLWEQAAKQNHVQAQYLLGLSYFDGTGVVRNYATALEWFKKAADQGY 476
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKA 283
+ A Y G G + +A KW ++AA+ H +Q G G E KA
Sbjct: 477 LEAQVQLGYMYERGLGATSNLAEAMKWYQKAAEQQHSWSQYYLGTCYETGKGVEKNYAKA 536
Query: 284 VVYLELATRAGETAA 298
+ + A +G ++A
Sbjct: 537 FEWYQKAAASGYSSA 551
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG---STLAMVDAGLMYWEMDKKEA-AISLYRQA 163
G ++ G+ V+K++ +A+ + K A +G + + +A + + MD+ A +R++
Sbjct: 55 GSMYEEGKEVKKDIVEAVKWWRKAAEQGHMDAQYVLGNAAIFGYGMDRNPVEAAKWWRKS 114
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G + Q + EAV+ +A+ GH AQY L + + G GV+
Sbjct: 115 AEQGHISGQYTIGNAYMYGEGVKKDPTEAVRWWKEAAAQGHGGAQYVLGMAYNDGIGVEQ 174
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA RW+ +A E Y A Y L Y+ G G+ H A K ++ A+ H ++Q
Sbjct: 175 DFTEAVRWWQKAVEQNYAPAHYPLGLAYAEGHGVKKDHDAALKHWQQGAEKEHARSQFAL 234
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHV 301
G G + G + +AV Y A G A ++
Sbjct: 235 G-GAYAHGYGVPRDPAEAVKYWRKAAEQGYVPAQYM 269
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV+K+ +A+ + + AA+G A G+ Y E D EA + Q
Sbjct: 127 GNAYMYGEGVKKDPTEAVRWWKEAAAQGHGGAQYVLGMAYNDGIGVEQDFTEAV--RWWQ 184
Query: 163 AAVLGD--PAAQP------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AV + PA P + + A+K Q + H R+Q+ L G GV
Sbjct: 185 KAVEQNYAPAHYPLGLAYAEGHGVKKDHDAALKHWQQGAEKEHARSQFALGGAYAHGYGV 244
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ EA +++ +AAE GYV A Y +L Y+ G G +A W ++AAD GH +AQ
Sbjct: 245 PRDPAEAVKYWRKAAEQGYVPAQYMLALSYADGYGGNKDPEEALLWCRKAADQGHIQAQF 304
Query: 269 EHGLGLF-TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G F ++ E + V + + A AGE + + + Q ++D
Sbjct: 305 LLGRAYFYSKKEYAEGVKWWQRAASAGEKESQYELGIAYQLGKGIAQD 352
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G ++ G+GV KN KA + + K AA G + A G +Y+ + A+ Y++A
Sbjct: 520 GTCYETGKGVEKNYAKAFEWYQKAAASGYSSAFAKMGNVYYSGYGVPKNYDEAMKWYQKA 579
Query: 164 AVLGDPAAQ---------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
GDP + + EA K AS GH AQY L++ V
Sbjct: 580 VEKGDPTGEGHYYLGLAYFTGNGVKKSPVEAAKRWTIASERGHALAQYALSVSYSNNAPV 639
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N A +W AAE G V A Y + Y G + QA W ++AA+ GH A+
Sbjct: 640 LENYLGAVKWRKEAAEKGDVNAQYYLATSYMLGFDQEKNINQATVWFQKAAEQGHSGAK 698
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D +AQP V L + + G ++QYQL G+ V ++ EA +W+ +AAE G+
Sbjct: 30 DVSAQP------VAGLRKTAEQGDAQSQYQLGSMYEEGKEVKKDIVEAVKWWRKAAEQGH 83
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG---EMMKA 283
+ A Y FG G+ + +A KW +++A+ GH Q G ++ EG + +A
Sbjct: 84 MDAQYVLGNAAIFGYGMDRNPVEAAKWWRKSAEQGHISGQYTIGNAYMYGEGVKKDPTEA 143
Query: 284 VVYLELATRAGETAADHV 301
V + + A G A +V
Sbjct: 144 VRWWKEAAAQGHGGAQYV 161
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-AISLYRQAAVLGDP 169
+ G G K+ ++AL K A +G A G Y+ K+ A + +++AA G+
Sbjct: 274 YADGYGGNKDPEEALLWCRKAADQGHIQAQFLLGRAYFYSKKEYAEGVKWWQRAASAGEK 333
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+Q + E+VK +A+ GH AQ+ L + G+GV + +AA
Sbjct: 334 ESQYELGIAYQLGKGIAQDDVESVKWFQKAAEQGHPDAQHMLGRAYYYGKGVPKDYSQAA 393
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
W ++A+ G A + Y G G+ + +A K ++AA H +AQ GL F
Sbjct: 394 HWLKQSADQGNGWAQVTLGVLYRNGYGVANNDSEAVKLWEQAAKQNHVQAQYLLGLSYF 452
>gi|432431914|ref|ZP_19674346.1| hypothetical protein A13K_02199 [Escherichia coli KTE187]
gi|432844579|ref|ZP_20077478.1| hypothetical protein A1YS_02218 [Escherichia coli KTE141]
gi|430953463|gb|ELC72361.1| hypothetical protein A13K_02199 [Escherichia coli KTE187]
gi|431394906|gb|ELG78419.1| hypothetical protein A1YS_02218 [Escherichia coli KTE141]
Length = 647
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 267
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 346
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 347 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 391
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 392 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 439
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|329851658|ref|ZP_08266415.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328840504|gb|EGF90076.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 712
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 134 RGSTLAMVDAGLMYWEMDKKEA---AISLYRQAAVLGDP-------------AAQPANAE 177
RGS AM G +Y+ + + +A A+ R+A+ G+ A P +A
Sbjct: 477 RGSPRAMRKLGALYFTLQQPDASQQAVKWLREASRHGETDAYIDLGRAYASGAGVPVDAA 536
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
A +A+ AG++ ++ G GV N Q AA +LRAA G AM S
Sbjct: 537 RAFTFFEEAADAGNLTGLIEMGRSYATGYGVARNPQRAAELFLRAANAGSAEAMIMLSYS 596
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y G+G+P S +AR W+KR AD G +AQ +GL
Sbjct: 597 YEVGDGVPQSLPEARAWLKRGADSGDAEAQYWYGL 631
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 20/170 (11%)
Query: 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
FTL Q A+ K +A R E + G+ + G GV + +A F + A G
Sbjct: 491 FTLQQPDASQQAVKWLREASR-HGETDAYIDLGRAYASGAGVPVDAARAFTFFEEAADAG 549
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQ 195
+ +++ G Y G A+ N + A +L +A+ AG A
Sbjct: 550 NLTGLIEMGRSY-----------------ATGYGVAR--NPQRAAELFLRAANAGSAEAM 590
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
L+ G GV +L EA W R A+ G A Y L G G P
Sbjct: 591 IMLSYSYEVGDGVPQSLPEARAWLKRGADSGDAEAQYWYGLYMLDGRGGP 640
>gi|338708080|ref|YP_004662281.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294884|gb|AEI37991.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 368
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 21/243 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV K+ AL + A +G +A + G MY++ + AI+ Y+++
Sbjct: 120 GSMYQYGQGVTKDYSAALTWLQRAAGQGDKVAQNNLGDMYYQGAGVAQDYKTAIAWYQKS 179
Query: 164 AVLGDPAAQ------------PANAEEAVKLLYQASIAGHVRA-QYQLALCLHRGRGVDF 210
A G A+ A + YQ + + A +Y LA +G+GV
Sbjct: 180 AAQGYAPAEYDLGVMYSQGQGVAQDYATAAIWYQKAADQRLAAAEYNLAYLYEQGQGVTQ 239
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q+A WY +AA+ G+ +A N + Y G+G+ +++ A W ++AAD G AQ
Sbjct: 240 DYQKALSWYQKAADRGFAKAQSNLASLYYHGQGVTQNYKTALSWYQKAADQGDAVAQFVL 299
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
G LG + + A ++ LA + G A++ V+ + L+ + A + W A
Sbjct: 300 GKIYHLGQSVQKSDVMAYMWFNLAAQRGLKNAENNCLVLSKILTPAQLNDAKKLTQDWMA 359
Query: 327 MPS 329
S
Sbjct: 360 KHS 362
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ+ L +G+GV N + A WY +AA+ G+V+A N Y +G+G+ +
Sbjct: 75 GHAEAQFYLGSLYEQGKGVSQNYKTAFSWYQKAADQGFVKAENNVGSMYQYGQGVTKDYS 134
Query: 250 QARKWMKRAADCGHGKAQLEHGLG-LFTEG-----EMMKAVVYLELATRAGETAADHVKN 303
A W++RAA G G ++ LG ++ +G + A+ + + + G A++
Sbjct: 135 AALTWLQRAA--GQGDKVAQNNLGDMYYQGAGVAQDYKTAIAWYQKSAAQGYAPAEYDLG 192
Query: 304 VILQQLSATSRDRAMLVV 321
V+ Q ++D A +
Sbjct: 193 VMYSQGQGVAQDYATAAI 210
>gi|291406677|ref|XP_002719663.1| PREDICTED: sel-1 suppressor of lin-12-like isoform 2 [Oryctolagus
cuniculus]
Length = 744
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 337 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 396
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 397 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 456
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 457 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 516
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 517 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 553
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 212 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 271
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 272 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 331
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 332 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 391
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 392 ADMGNPVGQ--SGLGM 405
>gi|307609926|emb|CBW99453.1| hypothetical protein LPW_12271 [Legionella pneumophila 130b]
Length = 489
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++ G GV K+L KA+ + K A +G A + G++Y + G
Sbjct: 51 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLY-----------------LKG 93
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P N+++A+ +AS G Q + + G GV +L +A WY +AAEGG
Sbjct: 94 EGV--PQNSQQAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGN 151
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
YN ++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 152 SDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 202
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 267 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 326
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ N EAV +A+ G AQ+ LA+ +G G+ +
Sbjct: 327 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 386
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +WY +AAE G A N ++ Y GEG+ + ++A W ++AA+ G AQ+ G
Sbjct: 387 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKIDFKKAMYWYQKAAEQGLDLAQINLG 446
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 303
+ G+ + KA ++ A +G A + N
Sbjct: 447 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 482
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 42 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 101
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 102 QAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 161
Query: 306 LQQLSATSRD 315
+ +D
Sbjct: 162 YMYGNGIPKD 171
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV+K+L +A + K A G++ + +MY + + AI Y +A
Sbjct: 123 GILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKA 182
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + + A+ +A+ G + AQ L + G
Sbjct: 183 AEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQ 242
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G +A N Y G G ++A W ++AA+ G AQ
Sbjct: 243 DGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNL 302
Query: 271 GLGLFTEGEMM---KAVVYLELATRAG 294
G+ +GE+ KA ++ + A G
Sbjct: 303 GVLYSNDGELQDYKKAYLWFKKAADQG 329
>gi|110641882|ref|YP_669612.1| hypothetical protein ECP_1708 [Escherichia coli 536]
gi|110343474|gb|ABG69711.1| putative TPR repeat protein [Escherichia coli 536]
Length = 647
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 502
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 54/278 (19%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI------ 157
G +K L+ S L A +G +LA G MY+E D+ +
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNW 350
Query: 158 -----------SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+LY + D N EA K A+ G+ AQY+LA
Sbjct: 351 FTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAV 410
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA +WYL AA G+ A Y Y G G+ QA +W ++A+ G+ A
Sbjct: 411 EPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHA 470
Query: 267 QLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
Q H L++ E + KA+ + T+A + AD
Sbjct: 471 QY-HTARLYSGSESIPQDQEKALYWF---TKAAKNGAD 504
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLINNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSPEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|126640192|ref|YP_001083176.1| signal peptide [Acinetobacter baumannii ATCC 17978]
Length = 183
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K++ +A + F K A +G A + G++Y D+ G
Sbjct: 36 GMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGVLY---DR--------------G 78
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AQ N E+A + +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 79 EGTAQ--NYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNE 136
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN + Y GEG P + + A+KW ++AAD G A+
Sbjct: 137 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAK 176
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY+ E +
Sbjct: 7 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDM----------------- 49
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ A + +A+ GH +AQY L + RG G N ++A WY RAAE GY A YN
Sbjct: 50 --KRAFEYFAKAADKGHAKAQYNLGVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNL 107
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S QA KW +AA+ H ++ ++ L ++ GE L+LA +
Sbjct: 108 AHLYKKGHGVAQSDEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKW 163
Query: 294 GETAAD 299
+ AAD
Sbjct: 164 FQQAAD 169
>gi|295104276|emb|CBL01820.1| FOG: TPR repeat, SEL1 subfamily [Faecalibacterium prausnitzii
SL3/3]
Length = 734
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
+++ A A LR G + G+G KN+ +A + K A +G+ A G+ Y
Sbjct: 126 QAYKAAAEKYDSAEAQLRLGLCYAEGKGNEKNMVEAAKWYRKAAEQGNADAQNRLGVRY- 184
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
D+ E + +EA K +++ GH +AQ LAL G+GV
Sbjct: 185 --DRGEGV----------------SKDVKEAAKWYAKSAAQGHPKAQCNLALDYKTGKGV 226
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ +L++A + +A GY A N CY GEG+ H +A KWMK+AA+ G AQ
Sbjct: 227 EKDLKKAVELFYNSAIQGYANAQSNLGECYYNGEGVEQDHAEAFKWMKKAAEQGDADAQS 286
Query: 269 EHGLGLFTEGE 279
G ++++G+
Sbjct: 287 VVG-DMYSDGD 296
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYR 161
G + G GV+++ ++A F A +G+ A V GL W ++ I +R
Sbjct: 289 GDMYSDGDGVQQDEEEAKKWFYLAAKQGNADAQVKYGLTLANDDADWNDPAQQEGIKWFR 348
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA G PA Q + ++A++ +++ AQY L C G GV
Sbjct: 349 KAAEQGHPAGQYVLAGIYLNGYGVEKDEKKAIEWYKKSAEQDFAAAQYDLGACYLNGLGV 408
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + + A W +AAE Y A YS G G R+A +W K+AA+ G +AQ
Sbjct: 409 EEDEKRALYWVQKAAEQDYADAQVVLGNFYSEGIGAEKDERKAFEWFKKAAEQGKAEAQF 468
Query: 269 EHGLGLF----TEGEMMKAVVYLELATRAGETAADH 300
G F E + KA+ +LE A G A +
Sbjct: 469 FLGCSYFAGIGVEEDKSKAMEWLEKAAEQGNADAQN 504
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-KKEAAIS 158
EA L G + G GV ++ KA++ K A +G+ A G Y + + A
Sbjct: 465 EAQFFL--GCSYFAGIGVEEDKSKAMEWLEKAAEQGNADAQNKLGEYYIGVGVETRKAFE 522
Query: 159 LYRQAAVLGDPAAQ----------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
L+++AA G AQ PA EAVK +A+ G AQY A CL
Sbjct: 523 LFQKAAENGSKEAQRNLGKCYMKGLGVNKLPA---EAVKYYKKAAEQGDAEAQYLFATCL 579
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G V N+++A +Y ++A+ Y++A+ + +CY+ G G+P ++A A++
Sbjct: 580 FIGNAVTQNVKQAVEYYQKSAQQEYMKAINDLGVCYARGIGVPKDGKEALAHFGAASEGD 639
Query: 263 HG 264
HG
Sbjct: 640 HG 641
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 119/289 (41%), Gaps = 45/289 (15%)
Query: 54 KSTEGHDFASLPFDV----LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGK 109
KS E DFA+ +D+ LN + + RA V K+ A + +A V+L G
Sbjct: 385 KSAE-QDFAAAQYDLGACYLNGLGVE--EDEKRALYWVQKA---AEQDYADAQVVL--GN 436
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAA 164
+ G G K+ KA + F K A +G A G Y+ E DK +A + +AA
Sbjct: 437 FYSEGIGAEKDERKAFEWFKKAAEQGKAEAQFFLGCSYFAGIGVEEDKSKA-MEWLEKAA 495
Query: 165 VLGDPAAQPANAE----------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
G+ AQ E +A +L +A+ G AQ L C +G GV+ E
Sbjct: 496 EQGNADAQNKLGEYYIGVGVETRKAFELFQKAAENGSKEAQRNLGKCYMKGLGVNKLPAE 555
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A ++Y +AAE G A Y + C G + + +QA ++ +++A
Sbjct: 556 AVKYYKKAAEQGDAEAQYLFATCLFIGNAVTQNVKQAVEYYQKSA--------------- 600
Query: 275 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
+ E MKA+ L + G K + +A+ D V DS
Sbjct: 601 --QQEYMKAINDLGVCYARGIGVPKDGKEALAHFGAASEGDHGFYVADS 647
>gi|237748162|ref|ZP_04578642.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379524|gb|EEO29615.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 489
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 99/254 (38%), Gaps = 70/254 (27%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM------------------- 146
RW GRGV KN +AL F K A G A + G+M
Sbjct: 169 RWALMLASGRGVAKNEGEALKWFKKAAVAGDVEAQRNLGIMLSTGKGVTGGKPDFAEAAR 228
Query: 147 -YWEMDKK-----------------------EAAISLYRQAAVLGDPAAQPANAEEAVKL 182
Y KK E A+ LYR AA G A AE AV L
Sbjct: 229 WYGLAAKKGDAKAQYGLGILYAKGQGVAPDQEKALILYRMAATQG-----LATAEYAVGL 283
Query: 183 LYQ------------------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
Y A+ G VRAQY LAL L GRG + A++W+L AAE
Sbjct: 284 AYAYGRGTAQNDVKAADWFEAAAQQGVVRAQYNLALMLEAGRGRPVDTVAASKWFLMAAE 343
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEM 280
G A YN Y+ G+G+P +A W ++AA G KAQ G+ G+ + +
Sbjct: 344 KGLREAQYNMGYHYAEGKGVPRDQGKAVFWYEKAAAAGDVKAQYNLGMLYLNGVNGKADD 403
Query: 281 MKAVVYLELATRAG 294
KA + +A AG
Sbjct: 404 EKAAFFYRMAAGAG 417
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLA------MVDAG--------------LMY 147
G + +GRG +N KA D F A +G A M++AG LM
Sbjct: 282 GLAYAYGRGTAQNDVKAADWFEAAAQQGVVRAQYNLALMLEAGRGRPVDTVAASKWFLMA 341
Query: 148 WEMDKKEAAISL-YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
E +EA ++ Y A G P Q +AV +A+ AG V+AQY L + G
Sbjct: 342 AEKGLREAQYNMGYHYAEGKGVPRDQG----KAVFWYEKAAAAGDVKAQYNLGMLYLNGV 397
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ ++AA +Y AA GY AMY ++ Y G G+ S++ A +W +RA
Sbjct: 398 NGKADDEKAAFFYRMAAGAGYGPAMYRLAVLYEEGRGVKQSYQLAGEWYERA 449
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L GK GRGV K+ A+ L A G+ A G M E I L
Sbjct: 60 LEVGKLLLTGRGVAKDEAAAVKWLLVAADSGNRDAQYMLGAMSVE------GIGL----- 108
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
P +++ A+ L +A+ G RA+ L + + + ++AARW+ RAA
Sbjct: 109 --------PKDSQVALTWLSKAAAQGDARAKTALGILMQSAGPGSQHTEQAARWFERAAA 160
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-------E 277
G A +L + G G+ + +A KW K+AA G +AQ G+ L T +
Sbjct: 161 SGEPEAQRRWALMLASGRGVAKNEGEALKWFKKAAVAGDVEAQRNLGIMLSTGKGVTGGK 220
Query: 278 GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+ +A + LA + G+ A + ++ + + D+
Sbjct: 221 PDFAEAARWYGLAAKKGDAKAQYGLGILYAKGQGVAPDQ 259
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E A L + G+ RA ++ L GRGV + A +W L AA+ G A Y
Sbjct: 41 ESAYATLMPEAEKGNPRAALEVGKLLLTGRGVAKDEAAAVKWLLVAADSGNRDAQYMLGA 100
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG----EMMKAVVYLELATR 292
G GLP + A W+ +AA G +A+ G+ + + G +A + E A
Sbjct: 101 MSVEGIGLPKDSQVALTWLSKAAAQGDARAKTALGILMQSAGPGSQHTEQAARWFERAAA 160
Query: 293 AGETAA 298
+GE A
Sbjct: 161 SGEPEA 166
>gi|375263333|ref|YP_005025563.1| Sel1 domain-containing protein [Vibrio sp. EJY3]
gi|369843760|gb|AEX24588.1| Sel1 domain-containing protein [Vibrio sp. EJY3]
Length = 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 92 NDALRPL----REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
N L PL ++AM LL G ++ G+GV K+ + A +LK A G A + G Y
Sbjct: 41 NSILEPLADNNKDAMALL--GYMYEMGQGVPKDYNAAATLYLKAAKLGQAKAQFNVGNHY 98
Query: 148 WE----MDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAG 190
+ +AAI+ Y++AA G A N EEA + +A+ G
Sbjct: 99 RDGRGGKQDYQAAIAWYKKAAHQGLSIASSEIGALYYTGTGVSQNYEEAFYWMQKAANGG 158
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+AQ L + G GV+ N +EA +W L++A G AM + Y G+ + S +
Sbjct: 159 LAKAQLDLCMMYIHGHGVNINRKEAFQWCLKSAMQGNALAMVQVGVMYLAGKDIEQSDEK 218
Query: 251 ARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADH 300
A W+ AA+ G +AQ G G++ E + KA + A G+ A +
Sbjct: 219 AFTWLMNAANKGVAQAQYNIGNYYLEGIYLEQDYEKAFSWFRKAALQGDPYAQY 272
>gi|351694360|gb|EHA97278.1| sel-1-like protein 1 [Heterocephalus glaber]
Length = 793
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 445
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 505
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 565
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSATSRDR 316
+G AV+ YL LA + E A + IL Q AT D
Sbjct: 566 KDGGYNAAVIQYLLLAEQGYEVAQSNAA-FILDQKEATIVDE 606
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 261 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 320
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 321 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 380
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 381 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 440
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 441 ADMGNPVGQ--SGLGM 454
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 453 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 500
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 501 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 534
>gi|433207860|ref|ZP_20391543.1| hypothetical protein WI1_01626, partial [Escherichia coli KTE97]
gi|431730872|gb|ELJ94431.1| hypothetical protein WI1_01626, partial [Escherichia coli KTE97]
Length = 480
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 164 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 223
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 224 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 283
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A RW+L++AE GY+ A Y+T+ YS E +P +A W +AA G
Sbjct: 284 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKALYWFTKAAKNG 335
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 70 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 123
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 124 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 179
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 180 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 224
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 225 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 272
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 242 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 301
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 302 HAQYHTARLYSGSESIPQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 361
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + + A WY +AA G A + T+
Sbjct: 362 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDENHALHWYEKAARLGATEAQHQTAA 421
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 422 MYAQGTGTKIDNKQAWMWLTIAGN 445
>gi|381157692|ref|ZP_09866926.1| Sel1 repeat protein [Thiorhodovibrio sp. 970]
gi|380881555|gb|EIC23645.1| Sel1 repeat protein [Thiorhodovibrio sp. 970]
Length = 241
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 25/187 (13%)
Query: 136 STLAMVDAGL-----MYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAE 177
STLA + L ++ + D EA + L+ +AA+ G P AQ P +
Sbjct: 26 STLADESSNLRQAIELFQKGDIAEAEV-LFERAALAGSPQAQFNLGVMYDQGVGLPEDDS 84
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
A + A+ G AQ+ LAL +G GV + +AARWY +AA+ G RA +N +L
Sbjct: 85 AAARWYALAAEQGDAEAQFNLALLYDKGNGVPQDRAQAARWYRQAAQQGMARAQFNLALM 144
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-----MKAVVYLELATR 292
+ GEG+ S A W RAA G+ KAQ+ GL L+ EGE +KA +L L+
Sbjct: 145 HETGEGVEESIDDALDWYLRAARQGYLKAQVNLGL-LYFEGERVPRDDIKAYTWLGLSAA 203
Query: 293 AGETAAD 299
G AD
Sbjct: 204 QGYAEAD 210
>gi|325266778|ref|ZP_08133451.1| Sel1 repeat superfamily protein [Kingella denitrificans ATCC 33394]
gi|324981780|gb|EGC17419.1| Sel1 repeat superfamily protein [Kingella denitrificans ATCC 33394]
Length = 127
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N E A +L + + G + AQYQLA L G GV +L+ A WY +AAE G A +N
Sbjct: 21 NYEAAAPVLRRFAEQGDIDAQYQLAFMLEHGLGVKTDLEGAVHWYAKAAEQGDDSAQFNL 80
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L Y+ GEG+P + +A KW KRAA + AQ
Sbjct: 81 GLSYAQGEGVPQDYDEAAKWWKRAAKQDNKDAQ 113
>gi|30248264|ref|NP_840334.1| hypothetical protein NE0240 [Nitrosomonas europaea ATCC 19718]
gi|30180149|emb|CAD84151.1| hypothetical protein NE0240 [Nitrosomonas europaea ATCC 19718]
Length = 1032
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
AMV L G+ +++G GV +N++KA+ + K +G + AM L Y +
Sbjct: 775 AMVFL--GRCYQYGEGVNQNINKAIALYQKATDKGDSTAMTCLALCYQD----------- 821
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
G Q N +A+ L QA A Y L C G GV N A Y
Sbjct: 822 ------GKGVDQDWN--KAINLYQQAVKKNDCTAMYYLGACYENGYGVKQNRSSAIELYR 873
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT 276
AA G AM N Y G G+ + ++A K +RAA G +A G+ G
Sbjct: 874 MAANQGNSNAMVNLGFYYRNGIGVKQNRKEAVKLFQRAAKVGDYRAMCNLGVCYENGEGV 933
Query: 277 EGEMMKAVVYLELATRAGET-AADHVKNVILQQL 309
+ + KA+ + AT+AGE A +++N++L+
Sbjct: 934 DQDWNKAISLYQQATKAGEIRAISNIQNILLRNF 967
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDKKE-- 154
L + + G ++ GV+++L++A + + A +G++ A GL Y +E+ K+
Sbjct: 698 LDNSTAMFYLGLCYQRSEGVKEDLNEAFALYQQAADKGNSTATAYLGLCYQYEVGVKQDL 757
Query: 155 -AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
AIS Y++A G+ A N +A+ L +A+ G A LAL
Sbjct: 758 DKAISQYQRAVDEGNSLAMVFLGRCYQYGEGVNQNINKAIALYQKATDKGDSTAMTCLAL 817
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
C G+GVD + +A Y +A + AMY CY G G+ + A + + AA+
Sbjct: 818 CYQDGKGVDQDWNKAINLYQQAVKKNDCTAMYYLGACYENGYGVKQNRSSAIELYRMAAN 877
Query: 261 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
G+ A + G G+ + +AV + A + G+ A
Sbjct: 878 QGNSNAMVNLGFYYRNGIGVKQNRKEAVKLFQRAAKVGDYRA 919
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV +N +KA+ F + S AMV+ G+ Y + G+
Sbjct: 639 YQQGLGVVRNPEKAIYWFQMAVNKKSDTAMVNLGICYQK-----------------GEGV 681
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q NA A KL +A + A + L LC R GV +L EA Y +AA+ G A
Sbjct: 682 KQNLNA--AFKLFQRAVKLDNSTAMFYLGLCYQRSEGVKEDLNEAFALYQQAADKGNSTA 739
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAV 284
LCY + G+ +A +RA D G+ A + ++G G+ + KA+
Sbjct: 740 TAYLGLCYQYEVGVKQDLDKAISQYQRAVDEGNSLAMVFLGRCYQYGEGV--NQNINKAI 797
Query: 285 VYLELATRAGETAA 298
+ AT G++ A
Sbjct: 798 ALYQKATDKGDSTA 811
>gi|350587106|ref|XP_003128729.2| PREDICTED: protein sel-1 homolog 1-like [Sus scrofa]
Length = 713
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 307
+G+ AVV YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVVQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|354594421|ref|ZP_09012460.1| hypothetical protein CIN_11560 [Commensalibacter intestini A911]
gi|353672097|gb|EHD13797.1| hypothetical protein CIN_11560 [Commensalibacter intestini A911]
Length = 432
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 54/222 (24%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEA---------- 155
+ H +GV K+L+KA + + A +G+ LMYW E D +A
Sbjct: 194 YIHAKGVEKDLEKAREYYSLSARQGNMQGEYQLALMYWNGEGGEEDHSKARGYCEKAAYQ 253
Query: 156 -----------------AISL-YRQAAVLGDPAAQP--ANAEEAVKLLY----------- 184
+S+ Y++AA + AA+ A+ + +Y
Sbjct: 254 GEVNAEYFMGNIYYYGQGVSVDYKRAAYFYEKAARQDHGEAQNMIGYMYSEGQGVSKDYK 313
Query: 185 -------QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
QA+ +V+AQY L G+ V NL EA W+ +AA+ GYV A +N +
Sbjct: 314 LAIYWYEQAAARHNVQAQYSLGYIYLTGQIVKLNLTEAFEWFYKAADNGYVLAQFNLGVM 373
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y G+G+P ++ QA W ++A D GH K+ G ++ EG+
Sbjct: 374 YYKGDGVPQNYEQAVVWFQKAVDQGHKKSSFILGK-MYIEGQ 414
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 20/197 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A + G+ + G + +N +KA + F + A +G A+++ G+MY+E D +A
Sbjct: 112 AKAMFALGRIYIMGHLLEQNYEKAREYFEQSARQGEVEALLNLGMMYYEGVGVSQDYSKA 171
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+ L QAA G AQ + E+A + ++ G+++ +YQLAL
Sbjct: 172 RVYL-EQAAQKGAAEAQNNLAYMYIHAKGVEKDLEKAREYYSLSARQGNMQGEYQLALMY 230
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G G + + +A + +AA G V A Y Y +G+G+ + +++A + ++AA
Sbjct: 231 WNGEGGEEDHSKARGYCEKAAYQGEVNAEYFMGNIYYYGQGVSVDYKRAAYFYEKAARQD 290
Query: 263 HGKAQLEHGLGLFTEGE 279
HG+AQ G +++EG+
Sbjct: 291 HGEAQNMIGY-MYSEGQ 306
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N +A +L +A+ GHV++ LAL + G GV+ + ++A + AA+ G +AM+
Sbjct: 57 PQNYTKARELFEKAAAGGHVQSILYLALIYYEGLGVEQDDKKALVLFDDAAKRGNAKAMF 116
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYL 287
Y G L ++ +AR++ +++A G +A L G+ ++ EG + KA VYL
Sbjct: 117 ALGRIYIMGHLLEQNYEKAREYFEQSARQGEVEALLNLGM-MYYEGVGVSQDYSKARVYL 175
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAM 318
E A + G AA+ N+ + A ++ +
Sbjct: 176 EQAAQKG--AAEAQNNLAYMYIHAKGVEKDL 204
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+GV + +A + K A + A G MY E D K AI Y Q
Sbjct: 263 GNIYYYGQGVSVDYKRAAYFYEKAARQDHGEAQNMIGYMYSEGQGVSKDYK-LAIYWYEQ 321
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA + AQ + N EA + Y+A+ G+V AQ+ L + ++G GV
Sbjct: 322 AAARHNVQAQYSLGYIYLTGQIVKLNLTEAFEWFYKAADNGYVLAQFNLGVMYYKGDGVP 381
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
N ++A W+ +A + G+ ++ + Y G+G+ H
Sbjct: 382 QNYEQAVVWFQKAVDQGHKKSSFILGKMYIEGQGVAHDH 420
>gi|56552865|ref|YP_163704.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56544439|gb|AAV90593.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 336
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + +G + + K++D + + A +G+ A ++ GLM+ D K
Sbjct: 107 DADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKTK 166
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y+QAA G+P A+ P + +A + +A+ G+ A+ L L
Sbjct: 167 ALYWYQQAADKGNPQAELILGNMYYNGETVPLDKTKAFEWYQKAANQGNAAAELNLGLMY 226
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV + ++ WY +AAE G +A Y+ Y G+G+ + +A W ++AA+
Sbjct: 227 AHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAAN-- 284
Query: 263 HGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAGETAADH 300
HG AQ E LG+ F GE + A +L+ A G A +
Sbjct: 285 HGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 328
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 25/244 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KAL + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKALTLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD A A + ++V L QA+ G+ +AQ L L RG V +
Sbjct: 105 HGDADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDK 164
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A WY +AA+ G +A Y GE +PL +A +W ++AA+ G+ A+L GL
Sbjct: 165 TKALYWYQQAADKGNPQAELILGNMYYNGETVPLDKTKAFEWYQKAANQGNAAAELNLGL 224
Query: 273 GLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 327
++ G+ + K++ + + A G+ A++ + + D+A + SW
Sbjct: 225 -MYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKAL--SWYQQ 281
Query: 328 PSLH 331
+ H
Sbjct: 282 AANH 285
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
A L G F G V + KAL + + A +G+ A + G MY+ + K
Sbjct: 143 NAQAQLNLGLMFSRGDAVSLDKTKALYWYQQAADKGNPQAELILGNMYYNGETVPLDKTK 202
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A Y++AA G+ AA+ P + +++ +A+ G +A+Y L
Sbjct: 203 AFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMY 262
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ G GV + +A WY +AA G +A + + GEG+ + A W+K+AA+ G
Sbjct: 263 YNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHG 322
Query: 263 HGKAQLE 269
+ A+ +
Sbjct: 323 NDTAKYQ 329
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G V + KA + + K A +G+ A ++ GLMY D K ++S Y++A
Sbjct: 187 GNMYYNGETVPLDKTKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKA 246
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD A+ + +A+ QA+ G +A+ L + + G GV
Sbjct: 247 AEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTV 306
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ AA W +AA G A Y L ++
Sbjct: 307 DKNNAAYWLKQAANHGNDTAKYQLKLWFN 335
>gi|54297129|ref|YP_123498.1| hypothetical protein lpp1174 [Legionella pneumophila str. Paris]
gi|53750914|emb|CAH12325.1| hypothetical protein lpp1174 [Legionella pneumophila str. Paris]
Length = 490
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++ G GV K+L KA+ + K A +G A + G++Y + G
Sbjct: 52 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLY-----------------LKG 94
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P N+++A+ +AS G Q + + G GV +L +A WY +AAEGG
Sbjct: 95 EGV--PQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGN 152
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
YN ++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 153 SDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 203
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 268 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 327
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ N EAV +A+ G AQ+ LA+ +G G+ +
Sbjct: 328 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 387
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 388 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 447
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 303
+ G+ + KA ++ A +G A + N
Sbjct: 448 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 483
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 43 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 102
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 103 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 162
Query: 306 LQQLSATSRD 315
+ +D
Sbjct: 163 YMYGNGIPKD 172
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV+K+L +A + K A G++ + +MY + + AI Y +A
Sbjct: 124 GILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKA 183
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + + A+ +A+ G + AQ L + G
Sbjct: 184 AEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQ 243
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G +A N Y G G ++A W ++AA+ G AQ
Sbjct: 244 DGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNL 303
Query: 271 GLGLFTEGEMM---KAVVYLELATRAG 294
G+ +GE+ KA ++ + A G
Sbjct: 304 GVLYSNDGELQDYKKAYLWFKKAADQG 330
>gi|397663642|ref|YP_006505180.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|397666839|ref|YP_006508376.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395127053|emb|CCD05238.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
gi|395130250|emb|CCD08488.1| putative Beta-lactamase [Legionella pneumophila subsp. pneumophila]
Length = 489
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++ G GV K+L KA+ + K A +G A + G++Y + G
Sbjct: 51 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLY-----------------LKG 93
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P N+++A+ +AS G Q + + G GV +L +A WY +AAEGG
Sbjct: 94 EGV--PQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGN 151
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
YN ++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 152 SDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 202
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 267 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 326
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ N EAV +A+ G AQ+ LA+ +G G+ +
Sbjct: 327 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 386
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 387 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 446
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 303
+ G+ + KA ++ A +G A + N
Sbjct: 447 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 482
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 42 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 101
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 102 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 161
Query: 306 LQQLSATSRD 315
+ +D
Sbjct: 162 YMYGNGIPKD 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV+K+L +A + K A G++ + +MY + + AI Y +A
Sbjct: 123 GILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKA 182
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + + A+ +A+ G + AQ L + G
Sbjct: 183 AEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQ 242
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G +A N Y G G ++A W ++AA+ G AQ
Sbjct: 243 DGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNL 302
Query: 271 GLGLFTEGEMM---KAVVYLELATRAG 294
G+ +GE+ KA ++ + A G
Sbjct: 303 GVLYSNDGELQDYKKAYLWFKKAADQG 329
>gi|381394956|ref|ZP_09920667.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379329563|dbj|GAB55800.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 401
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 56/226 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GV K+ + F A +G A + GLMY+ D KEAA YR
Sbjct: 119 GIMYYSGQGVLKDFKEGAKWFKLSAEQGHANAQSNLGLMYYFGDGVLQDSKEAA-KWYRL 177
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV- 208
AA GD +AQ + +EAVK A+ G AQY + L + G GV
Sbjct: 178 AAEQGDASAQFVLGGIYYDGQGVIQDYKEAVKWFKLAAEQGDADAQYAIGLMYYSGDGVL 237
Query: 209 ---------------------DFNL--------------QEAARWYLRAAEGGYVRAMYN 233
FNL +EAA+WY AAE G A N
Sbjct: 238 QDSKEAAKWYRLAAEQGDANAQFNLGNMYAKGDGVLKDSKEAAKWYRLAAEQGDAEAQSN 297
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
L Y+ GEG+ ++++ KW + AA+ GH AQ G ++ +GE
Sbjct: 298 LGLAYANGEGVIQDYKESAKWYRLAAEQGHADAQFNLG-NMYADGE 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ-------------P 173
A G A + G MY+ D KEAA YR A+ G+ AQ
Sbjct: 35 AQDGDAEAQYELGNMYYFGEGVLQDSKEAA-KWYRLASEQGNAEAQFNLALMYVSGEDVL 93
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+++EA K A+ G AQY L + + G+GV + +E A+W+ +AE G+ A N
Sbjct: 94 QDSKEAAKWFKLAAEQGDASAQYNLGIMYYSGQGVLKDFKEGAKWFKLSAEQGHANAQSN 153
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLE 288
L Y FG+G+ ++A KW + AA+ G AQ G G++ +G+ + +AV + +
Sbjct: 154 LGLMYYFGDGVLQDSKEAAKWYRLAAEQGDASAQFVLG-GIYYDGQGVIQDYKEAVKWFK 212
Query: 289 LATRAGETAADH 300
LA G+ A +
Sbjct: 213 LAAEQGDADAQY 224
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 151 DKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQ 197
+K+ + I +Q A GD AQ +++EA K AS G+ AQ+
Sbjct: 22 EKENSVIEFLQQLAQDGDAEAQYELGNMYYFGEGVLQDSKEAAKWYRLASEQGNAEAQFN 81
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
LAL G V + +EAA+W+ AAE G A YN + Y G+G+ ++ KW K
Sbjct: 82 LALMYVSGEDVLQDSKEAAKWFKLAAEQGDASAQYNLGIMYYSGQGVLKDFKEGAKWFKL 141
Query: 258 AADCGHGKAQLEHGL-GLFTEGEMM---KAVVYLELATRAGETAADHV 301
+A+ GH AQ GL F +G + +A + LA G+ +A V
Sbjct: 142 SAEQGHANAQSNLGLMYYFGDGVLQDSKEAAKWYRLAAEQGDASAQFV 189
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +A + + +G+ A + LMY D KEAA ++
Sbjct: 47 GNMYYFGEGVLQDSKEAAKWYRLASEQGNAEAQFNLALMYVSGEDVLQDSKEAA-KWFKL 105
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD +AQ + +E K ++ GH AQ L L + G GV
Sbjct: 106 AAEQGDASAQYNLGIMYYSGQGVLKDFKEGAKWFKLSAEQGHANAQSNLGLMYYFGDGVL 165
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EAA+WY AAE G A + Y G+G+ +++A KW K AA+ G AQ
Sbjct: 166 QDSKEAAKWYRLAAEQGDASAQFVLGGIYYDGQGVIQDYKEAVKWFKLAAEQGDADAQYA 225
Query: 270 HGLGLFT 276
GL ++
Sbjct: 226 IGLMYYS 232
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GV ++ +A+ F A +G A GLMY+ D KEAA YR
Sbjct: 191 GGIYYDGQGVIQDYKEAVKWFKLAAEQGDADAQYAIGLMYYSGDGVLQDSKEAA-KWYRL 249
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ +++EA K A+ G AQ L L G GV
Sbjct: 250 AAEQGDANAQFNLGNMYAKGDGVLKDSKEAAKWYRLAAEQGDAEAQSNLGLAYANGEGVI 309
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
+ +E+A+WY AAE G+ A +N Y+ GEG+ + W
Sbjct: 310 QDYKESAKWYRLAAEQGHADAQFNLGNMYADGEGVLKDFITSYSW 354
>gi|365919644|ref|ZP_09444017.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364578945|gb|EHM56126.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 451
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
+G GV ++ +ALD + K AA+G A + G MY G+
Sbjct: 4 NGHGVAQDDRRALDWYQKSAAQGFAAAQCNLGWMY-------------------GEGRGV 44
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N E+A +A+I G +AQY L G GVD + + AA W+++AA+ V A Y
Sbjct: 45 EKNDEQAAYWYEKAAIQGDKQAQYNLGNLYIAGIGVDKDERRAAFWFVQAAQQDDVEAQY 104
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVY 286
N Y GEG+ R+A +W ++AA G+ KAQ E G G+ E+ A +
Sbjct: 105 NLGNLYFRGEGVTQDDRRAARWYEKAAQQGYAKAQCNLAMMYERGRGVAQNPEI--AAEW 162
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAM 318
A G++ A + ++ ++ +D M
Sbjct: 163 YGCAAEQGDSKAQYRLALLYEKGEGVPQDDNM 194
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + GRGV KN ++A + K A +G A + G +Y + D++ AA + Q
Sbjct: 35 GWMYGEGRGVEKNDEQAAYWYEKAAIQGDKQAQYNLGNLYIAGIGVDKDERRAAF-WFVQ 93
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA D AQ + A + +A+ G+ +AQ LA+ RGRGV
Sbjct: 94 AAQQDDVEAQYNLGNLYFRGEGVTQDDRRAARWYEKAAQQGYAKAQCNLAMMYERGRGVA 153
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
N + AA WY AAE G +A Y +L Y GEG+P A W++ AA
Sbjct: 154 QNPEIAAEWYGCAAEQGDSKAQYRLALLYEKGEGVPQDDNMAYYWLESAA 203
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
A A QA+ G+ AQY L + G+G++ + AA WY AAE G+ RA Y
Sbjct: 345 ARHAAHSFEQAARQGNSDAQYNLGVMYENGQGIEQDYARAAYWYELAAEQGHARAQYQLG 404
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCG 262
Y G G+ + + W +RAA+ G
Sbjct: 405 NLYREGLGVKEDPKIMQAWWQRAAEQG 431
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 206 RGVD-FN--LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
R +D FN + AA + +AA G A YN + Y G+G+ + +A W + AA+ G
Sbjct: 336 RAIDSFNRAARHAAHSFEQAARQGNSDAQYNLGVMYENGQGIEQDYARAAYWYELAAEQG 395
Query: 263 HGKAQLE------HGLGLFTEGEMMKA 283
H +AQ + GLG+ + ++M+A
Sbjct: 396 HARAQYQLGNLYREGLGVKEDPKIMQA 422
>gi|6851089|gb|AAF29413.1|AF052059_1 SEL1L [Homo sapiens]
gi|17646138|gb|AAL40905.1| sel-1 [Homo sapiens]
Length = 794
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 307
+G+ AV+ YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|419798285|ref|ZP_14323700.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385695080|gb|EIG25651.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 286
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 85 SLVCKSWNDALRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
++ S N A R ++E L G + G G ++ ++A F K A +
Sbjct: 33 NISQNSENQAFRLIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAE 92
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKL---------------- 182
A + G++Y+E + YRQA + AA+ NAE A L
Sbjct: 93 AQFNLGIIYYE---GQGTAQDYRQAKFWWEKAAEQGNAEAAFNLGILHYAGIGIPQDYIQ 149
Query: 183 ----LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
++A+ G AQ+ L L + G GV + + A W+ +AA+ G +A YN + Y
Sbjct: 150 AKTWFHKAADQGEDSAQFYLGLMYYSGEGVGQDYKLAKSWFEKAAKKGNAKAQYNLGIMY 209
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRA 293
+ G+G+ ++ +A+ W K+AA+ G+ AQ G+ L+ G+ +A + E A
Sbjct: 210 AEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGV-LYENGQGVTQNFTQAKSWFEKAAAQ 268
Query: 294 GETAADHVKNVILQQ 308
G T A H I+QQ
Sbjct: 269 GNTLAQHALEYIVQQ 283
>gi|325267701|ref|ZP_08134352.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
gi|324980825|gb|EGC16486.1| TPR repeat protein [Kingella denitrificans ATCC 33394]
Length = 380
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 81 LRAASLVCKSWNDALRPLREAMVL---------LRWGKRFKHGRGVRKNLDKALDSFLKG 131
L A L +W + + RE + L G +++G+GVR++ +A+ +
Sbjct: 45 LSALGLNQAAWTNDVSNSRETLQLAERGNAQAQFNLGMMYENGQGVRQDDAEAVKWYRLA 104
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH 191
A +G A + G+MY V D A EAVK QA+ G
Sbjct: 105 AEQGYAPAQSNLGVMY------------ENGQGVRQDDA-------EAVKWYQQAAAQGL 145
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
AQ L + + GRGV + EA +WY AAE G+ +A N + Y G+G+ + +A
Sbjct: 146 AEAQSNLGVMYYNGRGVRQDDAEAVKWYRLAAEQGFAQAQSNLGVMYDNGQGVRQDYTEA 205
Query: 252 RKWMKRAADCGHGKAQLEHGLGLFTEG 278
KW ++AA+ G AQ GL +++ G
Sbjct: 206 FKWFRQAAEQGVASAQYNLGL-MYSNG 231
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++G+GVR++ +A+ + + AA+G A + G+MY+ D EA + YR
Sbjct: 117 GVMYENGQGVRQDDAEAVKWYQQAAAQGLAEAQSNLGVMYYNGRGVRQDDAEA-VKWYRL 175
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + EA K QA+ G AQY L L GRGV
Sbjct: 176 AAEQGFAQAQSNLGVMYDNGQGVRQDYTEAFKWFRQAAEQGVASAQYNLGLMYSNGRGVR 235
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +W+ +AA G+ +A YN Y G+G+ +A KW ++AA G AQ
Sbjct: 236 QDDAEAVKWFQQAAAQGFAQAQYNLGTMYENGQGVRQDDAEAVKWYRQAAAQGDAPAQTN 295
Query: 270 HGLGLFT 276
G+ T
Sbjct: 296 LGVMYVT 302
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAA------ 156
G + +G+GVR++ +A F + A +G A + GLMY D EA
Sbjct: 189 GVMYDNGQGVRQDYTEAFKWFRQAAEQGVASAQYNLGLMYSNGRGVRQDDAEAVKWFQQA 248
Query: 157 ------ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ Y + + + EAVK QA+ G AQ L + GRGV
Sbjct: 249 AAQGFAQAQYNLGTMYENGQGVRQDDAEAVKWYRQAAAQGDAPAQTNLGVMYVTGRGVHQ 308
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ EA +W+ +AAE GY A Y G+G+ +A KW ++AA+ G AQ+
Sbjct: 309 DDAEAVKWFQQAAEQGYSPAQVLLGAMYKNGQGVRQDDAEAVKWYRQAAEQGFAPAQV 366
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G+GVR++ +A+ + + AA+G A + G+MY V G
Sbjct: 261 GTMYENGQGVRQDDAEAVKWYRQAAAQGDAPAQTNLGVMY-----------------VTG 303
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q + EAVK QA+ G+ AQ L G+GV + EA +WY +AAE G+
Sbjct: 304 RGVHQ--DDAEAVKWFQQAAEQGYSPAQVLLGAMYKNGQGVRQDDAEAVKWYRQAAEQGF 361
Query: 228 VRAMYNTSLCYS 239
A Y+
Sbjct: 362 APAQVLLDTIYN 373
>gi|19923669|ref|NP_005056.3| protein sel-1 homolog 1 isoform 1 precursor [Homo sapiens]
gi|62512184|sp|Q9UBV2.3|SE1L1_HUMAN RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|6518495|dbj|BAA87904.1| TSA305 [Homo sapiens]
gi|6683458|dbj|BAA89204.1| TSA305 [Homo sapiens]
gi|119601750|gb|EAW81344.1| sel-1 suppressor of lin-12-like (C. elegans) [Homo sapiens]
gi|225000728|gb|AAI72282.1| Sel-1 suppressor of lin-12-like (C. elegans) [synthetic construct]
gi|225000928|gb|AAI72577.1| Sel-1 suppressor of lin-12-like (C. elegans) [synthetic construct]
Length = 794
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQ 307
+G+ AV+ YL LA + E A + ++ Q
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQ 599
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|333913037|ref|YP_004486769.1| Sel1 domain-containing protein repeat-containing protein [Delftia
sp. Cs1-4]
gi|333743237|gb|AEF88414.1| Sel1 domain protein repeat-containing protein [Delftia sp. Cs1-4]
Length = 420
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
EA G +K G+GV + + A + + A +G A D GLMY + + +A
Sbjct: 134 EASAQYALGSLYKRGQGVALSAETAAQWYERSAQQGYAPAQSDLGLMYANGRGVARDDAQ 193
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR+AA GD AQ + +AV+ +++ G QY L +
Sbjct: 194 AVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRSAEQGEAAGQYSLGVMY 253
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV ++ +A RW++ AA G+ A +N + Y+ G + QA W+++AA+ G
Sbjct: 254 ATGRGVAEDVAQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDRDMAQAAHWLEKAAEQG 313
Query: 263 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGET 296
+ AQ G+ L+ G+ + +A +LE A + G+
Sbjct: 314 NAAAQSNLGV-LYANGQGVPASDEQAARWLERAAQQGDA 351
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGV ++ +A+ + K A +G +A + GLM E A+ ++++
Sbjct: 178 GLMYANGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGLMLAEGRGAAKDPAQAVQWFQRS 237
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ A Q + +A++ A+ GH AQ+ + G VD
Sbjct: 238 AEQGEAAGQYSLGVMYATGRGVAEDVAQALRWFVAAAGQGHADAQFNAGMLYAEGGVVDR 297
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
++ +AA W +AAE G A N + Y+ G+G+P S QA +W++RAA G AQ
Sbjct: 298 DMAQAAHWLEKAAEQGNAAAQSNLGVLYANGQGVPASDEQAARWLERAAQQGDALAQ 354
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P +P + V L+Q + G AQY L RG+GV + + AA+WY R+A+ GY
Sbjct: 112 PKGEPGLSAAEVAALHQHAEQGEASAQYALGSLYKRGQGVALSAETAAQWYERSAQQGYA 171
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKA 283
A + L Y+ G G+ QA +W ++AA+ G AQ GL + EG + +A
Sbjct: 172 PAQSDLGLMYANGRGVARDDAQAVQWYRKAAEQGDAVAQNNLGL-MLAEGRGAAKDPAQA 230
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
V + + + GE A + V+ AT R A V + R
Sbjct: 231 VQWFQRSAEQGEAAGQYSLGVMY----ATGRGVAEDVAQALR 268
>gi|261345228|ref|ZP_05972872.1| Sel1 repeat family protein [Providencia rustigianii DSM 4541]
gi|282566924|gb|EFB72459.1| Sel1 repeat family protein [Providencia rustigianii DSM 4541]
Length = 265
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G+R+ G+GV ++ A + F+K +G++ A G MY + DK A+ Y
Sbjct: 53 GERYFKGQGVSQDSKTAAEWFIKAGDQGNSDAQFRLGTMYVNGFGVRRDYDK---AMLWY 109
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+AA GD RA+ +A +G GV +L++AA WY
Sbjct: 110 EEAAKNGD-----------------------TRAETNMATMYAQGLGVKQDLEKAAYWYR 146
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+ G V A + YS G G+ L + +A W ++AA +Q G+ +++EG+
Sbjct: 147 KAAQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWFRKAAKQRDANSQDRLGV-MYSEGKG 205
Query: 281 MK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+K A +L A +G + ++ I +QLSA +A + D++
Sbjct: 206 VKKNLQQAYAWLSTAVYSGNKESQRLQKKIAEQLSADELKQAQKLADNY 254
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G GVR++ DKA+ + + A G T A + MY A
Sbjct: 86 FRLGTMYVNGFGVRRDYDKAMLWYEEAAKNGDTRAETNMATMY---------------AQ 130
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG + E+A +A+ +G+V AQ+++ G GV + ++A W+ +AA+
Sbjct: 131 GLG----VKQDLEKAAYWYRKAAQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWFRKAAK 186
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + YS G+G+ + +QA W+ A G+ ++Q
Sbjct: 187 QRDANSQDRLGVMYSEGKGVKKNLQQAYAWLSTAVYSGNKESQ 229
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+L A A + ++ + Q + G +Q+ L +G+GV + + AA W+++A +
Sbjct: 19 LLATSANSTAGEQTTIEHITQLAEKGDPASQFILGERYFKGQGVSQDSKTAAEWFIKAGD 78
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEM 280
G A + Y G G+ + +A W + AA G +A+ + GL + ++
Sbjct: 79 QGNSDAQFRLGTMYVNGFGVRRDYDKAMLWYEEAAKNGDTRAETNMATMYAQGLGVKQDL 138
Query: 281 MKAVVYLELATRAGETAA 298
KA + A ++G A
Sbjct: 139 EKAAYWYRKAAQSGNVIA 156
>gi|237748063|ref|ZP_04578543.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379425|gb|EEO29516.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 1238
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ + G+ VR++L K++ + KGA G T + D M E D+K AA ++Y +
Sbjct: 832 GRIYYDGKIVRQDLKKSVFWYRKGAQSGDTRSQNDLAYMMEYGKGLEKDEK-AACTMYEK 890
Query: 163 AA--------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
A L + + EAV+L A+ AQY L + G+GV
Sbjct: 891 TAGEKNAYGQFRLGLCYLNGKGGKAKDQREAVRLFESAAGQNLASAQYFLGIYHKEGKGV 950
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N+ EA +WYL AA+ G+V +M+ ++ G G ++A W ++AA+ G A
Sbjct: 951 VKNMNEAFKWYLTAADNGHVSSMFEVGKMFANGRGTERDDKKAFHWFEKAAENGSDSALT 1010
Query: 269 EHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
+ G+ GL + KA + A + A H
Sbjct: 1011 QLGIMYYKGLGISADKSKAASFFLKAAEKNNSYAQH 1046
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAISL------- 159
G G +++ KA F K A G T A GL+Y + DK +S+
Sbjct: 41 GAGGKRDWIKARIWFEKAATEGDTRAAYPLGLLYSAGLGTPIDYDKAFYWLSIAARQNIP 100
Query: 160 ---YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
YR A + + + E + +A+ GH+ AQ + + LH G GV NL E+
Sbjct: 101 DAQYRLAGLYQEGKGTAKSEREFAYWVKKAAGNGHIDAQRAMGMILHYGLGVHKNLPESV 160
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+W+ +AA G A Y + Y G GL + R+ KW+ RAA H +AQ
Sbjct: 161 KWFEKAANAGNATAQYYLGMDYMNGNGLAKNEREGEKWLYRAAMQDHLEAQ 211
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-----------------YWEM 150
G + G+ V++++ KAL+ F KG G + G M Y E
Sbjct: 651 GNIYYDGKIVKQDMAKALNYFQKGTGLGHLPSQNFVGFMIENGSGVKKDKEKACKIYDET 710
Query: 151 DKKEAAISLYRQAAV-LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
++ +A LYR L DP P N ++A L QA+ AQY LALC G+G
Sbjct: 711 GRRGSAYGLYRYGLCQLSDPDPSPENQKKAFILFEQAARKNLADAQYFLALCYEYGKGTP 770
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
N EA WY RA+E A+Y + Y
Sbjct: 771 KNPGEAIEWYRRASENDKPEALYQLGMLY 799
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 24/233 (10%)
Query: 62 ASLPFDVLNKIAASFTLPQLRAASLVCKSWND--ALRPLREAMVLLRWGKRFKHGRGVRK 119
AS FD+ + P R ++V W + A + R A L G + +G V
Sbjct: 283 ASAQFDLGRTLFQDKNSPAKRKEAVV---WLEKAAQQDERRAQAFL--GNMYYYGEFVPV 337
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA--------VL 166
+ KAL ++ A +G + A GL Y + D+++A L + A+ L
Sbjct: 338 DYVKALPLLMRAADKGDSFAQYTLGLAYIDGNGIAKDERKAFSWLEKSASQNRASAQYFL 397
Query: 167 G----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
G D P N E+ ++LL + + G+V AQY+L H G + +L EA +WY A
Sbjct: 398 GLMYLDGTGTPVNEEKGIRLLKELAKTGYVYAQYKLGTYAHSGLHMAKDLAEARKWYQLA 457
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A +++A Y + G ++ W AA AQLE G L
Sbjct: 458 ASQDHIKAKYWLGMSLFQGPDSEQDRKKGVYWFTEAAKQDDPDAQLELGKSLL 510
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G K G+GV KN+++A +L A G +M + G M+
Sbjct: 941 GIYHKEGKGVVKNMNEAFKWYLTAADNGHVSSMFEVGKMF-------------------A 981
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + ++A +A+ G A QL + ++G G+ + +AA ++L+AAE
Sbjct: 982 NGRGTERDDKKAFHWFEKAAENGSDSALTQLGIMYYKGLGISADKSKAASFFLKAAEKNN 1041
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMM 281
A + Y +G+GL + A +W+ +AAD A E +G+G+ E
Sbjct: 1042 SYAQHWLGYMYLYGKGLEKNGELANQWLSKAADQNETGAIFELGKQYWYGMGVPVNPE-- 1099
Query: 282 KAVVYLELATRAGETAADHVKNVI 305
KA+V L+ A G A + I
Sbjct: 1100 KAIVLLQKAGNDGHVIAQRILGYI 1123
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G RA Y L L G G + +A W AA A Y + Y G+G
Sbjct: 57 KAATEGDTRAAYPLGLLYSAGLGTPIDYDKAFYWLSIAARQNIPDAQYRLAGLYQEGKGT 116
Query: 245 PLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
S R+ W+K+AA GH AQ L +GLG+ + ++V + E A AG A
Sbjct: 117 AKSEREFAYWVKKAAGNGHIDAQRAMGMILHYGLGVHK--NLPESVKWFEKAANAGNATA 174
Query: 299 DH 300
+
Sbjct: 175 QY 176
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 22/159 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+G+ KN + A K A + T A+ + G YW Y
Sbjct: 1049 GYMYLYGKGLEKNGELANQWLSKAADQNETGAIFELGKQYW-----------YGMGV--- 1094
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG---RGVDFNLQEAARWYLRAAE 224
P N E+A+ LL +A GHV AQ L G +G+ + ++A +W+ +AA
Sbjct: 1095 -----PVNPEKAIVLLQKAGNDGHVIAQRILGYIYADGGPEKGIPLDFEKAVQWFEKAAR 1149
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+L G+G P + + + + ++A+ +
Sbjct: 1150 QDDAAGKMGLALLTLTGKGTPKNEEKGIRLLTQSANMNY 1188
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----- 153
E + GK++ +G GV N +KA+ K G +A G +Y + +
Sbjct: 1076 NETGAIFELGKQYWYGMGVPVNPEKAIVLLQKAGNDGHVIAQRILGYIYADGGPEKGIPL 1135
Query: 154 --EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQL 198
E A+ + +AA D A + P N E+ ++LL Q++ + A L
Sbjct: 1136 DFEKAVQWFEKAARQDDAAGKMGLALLTLTGKGTPKNEEKGIRLLTQSANMNYPSAMELL 1195
Query: 199 ALCLHRGRGVDFNLQEAARWYLRAAEGG 226
+G + +EA +WY RAAE G
Sbjct: 1196 GDFYREEKG---DKKEAEKWYRRAAETG 1220
>gi|433210797|ref|ZP_20394429.1| hypothetical protein WI1_04569, partial [Escherichia coli KTE97]
gi|431725617|gb|ELJ89459.1| hypothetical protein WI1_04569, partial [Escherichia coli KTE97]
Length = 482
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 164 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 223
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 224 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 283
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +AE +A Y Y G +P A +K AAD G A L
Sbjct: 284 DYQQVVHWLNLSAEQKNSKAEYTLGYMYYKGTEIPQDMTMAINLLKAAADHGDIDAALVL 343
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + ++I Q
Sbjct: 344 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILSMIYYQ 387
>gi|399115780|emb|CCG18583.1| conserved hypothetical Sel1 repeat protein [Taylorella
equigenitalis 14/56]
Length = 341
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 35/252 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA- 155
+A G + G GV +N A+ + K AA+G A+ + G MY + +DK +
Sbjct: 93 DAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMMGYGVDKNYSK 152
Query: 156 AISLYRQAAV---------LG---------DPAAQPANAEEAVKLLYQASIAGHVRAQYQ 197
AI LY +AA LG +P+ + N +L +A+ H AQY
Sbjct: 153 AIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTN-----ELYEKAANKNHTEAQYN 207
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L + G+GV + ++A WY +AAE + A N + Y GEG+ + A +W K+
Sbjct: 208 LGIHYQFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEKGEGVEHDYDLAMEWYKK 267
Query: 258 AADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 311
AA AQ E+G G F A+++ LA E A K+ I ++
Sbjct: 268 AAKHNDPVAQNNLGLLYEYGKGTFK--NWKNAIMWYTLACDNHEKAGCEGKDRIEAKIKK 325
Query: 312 TSRDRAMLVVDS 323
+ D+ +++
Sbjct: 326 ENEDKNKTKIEN 337
>gi|375105138|ref|ZP_09751399.1| TPR repeat-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374665869|gb|EHR70654.1| TPR repeat-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 344
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV+K+ +AL K A G+ A+ GLMY I + V
Sbjct: 132 GGLYLSGNGVKKDEAQALLWLRKAADGGNVGAINKIGLMY--------RIGM----GVAK 179
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP A A K QA+ AG A + LA RG GV + A W R+A GGY
Sbjct: 180 DPTA-------AFKWFDQAAAAGEPMAMFNLAGTYERGEGVAKDDAAALEWTQRSANGGY 232
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A ++ +L Y G+G+ S + +W++ AA+ G +AQ G+ ++EG + ++
Sbjct: 233 PAAQFDLALRYREGKGVSKSTGEEVRWLRAAAERGWARAQGLLGI-YYSEGRGVAKDPVQ 291
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A V+L L R G D ++ + L+ R+RA + W+ +P
Sbjct: 292 ACVWLSLGAREGAALMD-LRKLECGALNPEGRERADKLTREWQPIP 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A+ + R AA GDP AQ P + +AV +A+ G+V QY + +
Sbjct: 39 GAVQILRTAAEQGDPDAQAGLGSFYVYGVGVPRDDGQAVNWYRKAAAQGNVEGQYNMGVM 98
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
L GRG+ + AA WY +AA+ G+ A +N Y G G+ QA W+++AAD
Sbjct: 99 LQAGRGLARDPAAAADWYRKAADQGHASAAHNLGGLYLSGNGVKKDEAQALLWLRKAADG 158
Query: 262 GH----GKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
G+ K L + +G+ + A + + A AGE A
Sbjct: 159 GNVGAINKIGLMYRIGMGVAKDPTAAFKWFDQAAAAGEPMA 199
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A Q + AV++L A+ G AQ L G GV + +A WY +AA G V
Sbjct: 31 AQQRGDVTGAVQILRTAAEQGDPDAQAGLGSFYVYGVGVPRDDGQAVNWYRKAAAQGNVE 90
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AV 284
YN + G GL A W ++AAD GH A G GL+ G +K A+
Sbjct: 91 GQYNMGVMLQAGRGLARDPAAAADWYRKAADQGHASAAHNLG-GLYLSGNGVKKDEAQAL 149
Query: 285 VYLELATRAGETAA 298
++L A G A
Sbjct: 150 LWLRKAADGGNVGA 163
>gi|148358759|ref|YP_001249966.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296106804|ref|YP_003618504.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|148280532|gb|ABQ54620.1| TPR repeat protein [Legionella pneumophila str. Corby]
gi|295648705|gb|ADG24552.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 489
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++ G GV K+L KA+ + K A +G A + G++Y + G
Sbjct: 51 GLQYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLY-----------------LKG 93
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P N+++A+ +AS G Q + + G GV +L +A WY +AAEGG
Sbjct: 94 EGV--PQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGN 151
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
YN ++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 152 SDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 202
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 267 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 326
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ N EAV +A+ G AQ+ LA+ +G G+ +
Sbjct: 327 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 386
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 387 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 446
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAA 298
+ G+ + KA ++ A +G A
Sbjct: 447 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDA 477
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 42 GDAQAQFELGLQYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 101
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + + V+
Sbjct: 102 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVM 161
Query: 306 LQQLSATSRD 315
+ +D
Sbjct: 162 YMYGNGIPKD 171
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV+K+L +A + K A G++ + +MY + + AI Y +A
Sbjct: 123 GILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKA 182
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + + A+ +A+ G + AQ L + G
Sbjct: 183 AEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQ 242
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G +A N Y G G ++A W ++AA+ G AQ
Sbjct: 243 DGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNL 302
Query: 271 GLGLFTEGEMM---KAVVYLELATRAG 294
G+ +GE+ KA ++ + A G
Sbjct: 303 GVLYSNDGELQDYKKAYLWFKKAADQG 329
>gi|365920097|ref|ZP_09444450.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364578522|gb|EHM55723.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 486
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 39/207 (18%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ +G G +NLDKA F K AA+G + A+ + G++Y E D K+A ++QAA
Sbjct: 232 YYNGEGGEQNLDKARTWFEKAAAQGDSDALRNLGIIYAEGEGVAQDYKKA-YDYWKQAAA 290
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
GD AAQ LA H G GV + +A +W+ AAE
Sbjct: 291 QGDTAAQNG-----------------------LAQLYHDGLGVTQDFAQAYQWWKTAAEQ 327
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMK-- 282
A + ++CY GEG+ ++A +W ++AA GH AQ +GLG L+ E +
Sbjct: 328 DNANAQNHLAICYLQGEGVNKDSKKACEWFEKAALRGHVVAQ--YGLGILYGHSEELDLP 385
Query: 283 -----AVVYLELATRAGETAADHVKNV 304
A+++LE A AG + A + +
Sbjct: 386 PQPATALLWLEKAAGAGHSGAQNALGI 412
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+ AQ LAL + G G + NL +A W+ +AA G A+ N + Y+ GEG+
Sbjct: 215 QAAERGNAEAQSILALYYYNGEGGEQNLDKARTWFEKAAAQGDSDALRNLGIIYAEGEGV 274
Query: 245 PLSHRQARKWMKRAADCG-----HGKAQLEH-GLGL 274
+++A + K+AA G +G AQL H GLG+
Sbjct: 275 AQDYKKAYDYWKQAAAQGDTAAQNGLAQLYHDGLGV 310
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV K+ KA + F K A RG +A G++Y ++ D
Sbjct: 340 YLQGEGVNKDSKKACEWFEKAALRGHVVAQYGLGILYGHSEEL--------------DLP 385
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
QPA A + L +A+ AGH AQ L + RG V+ + +A ++ ++A GG A
Sbjct: 386 PQPATA---LLWLEKAAGAGHSGAQNALGIRYARGIDVNQDYGKARTYWEQSAAGGDPEA 442
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKR 257
N + Y G G+ L A+ W ++
Sbjct: 443 QTNLGILYREGLGVTLDPDTAKSWFEK 469
>gi|359408934|ref|ZP_09201402.1| TPR repeat-containing protein [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356675687|gb|EHI48040.1| TPR repeat-containing protein [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 1229
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
R G + G G+ N + FL A++G A + G Y + D E AI+ R
Sbjct: 907 RLGVMAREGLGIAINAEVMEQRFLAAASQGDVRAQLALGKAYRKGDMLSQNYEQAIAFLR 966
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
A D A+ A+ E+A++ +A+ H+ AQY LA LH G V
Sbjct: 967 LAIDQQDREAEFTLGQMRLNGEGSAADPEQAIRHFRKAADNDHMLAQYTLADLLHMGTVV 1026
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 267
++ EAA +Y +AA+ GY+ A Y T+L Y G+G + QA ++ + AA GH +Q
Sbjct: 1027 KQDMTEAAYYYEQAAKQGYMMAQYRTALLYDTGKGGLKGYTQAAQFYELAAKQGHVPSQH 1086
Query: 268 -----LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
LE+GLGL + +M +A + A G+ A H
Sbjct: 1087 NLAILLENGLGL--KADMEQAAYWYGQAAEKGDMNAQH 1122
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
FK+G+GV ++LDKA+ F + A RG A GL Y+ G
Sbjct: 120 FKNGQGVERDLDKAVIWFTQAAERGDATAQNMLGLFYYS-----------------GQGV 162
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q N A K A+ G +QY LA RG GVD ++Q AARW+ AAE G +
Sbjct: 163 KQ--NFTTAAKYYQMAAEQGDRDSQYMLASLYRRGAGVDQDMQMAARWFTAAAEQGDRAS 220
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVY 286
N + Y G G+ + A KW + AA G +Q + GL + A+
Sbjct: 221 QANLAGLYENGYGVIQDYAAAAKWYEEAAKKGDMDSQFGLARLYQAGLGVAQDFTIAIQL 280
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
+ A G A + ++ + RD + ++W M +
Sbjct: 281 YQQAADKGHIGAHYQIALMYSKGEGVERD--LQQAEAWHKMAA 321
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLM---YWEMDKKEAAISLYRQAAVL 166
++ G GV +++ A F A +G + + AGL Y + AA Y +AA
Sbjct: 192 YRRGAGVDQDMQMAARWFTAAAEQGDRASQANLAGLYENGYGVIQDYAAAAKWYEEAAKK 251
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD +Q + A++L QA+ GH+ A YQ+AL +G GV+ +LQ
Sbjct: 252 GDMDSQFGLARLYQAGLGVAQDFTIAIQLYQQAADKGHIGAHYQIALMYSKGEGVERDLQ 311
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH------GKAQ 267
+A W+ AA+ G A ++ + Y G+GL + QA W +++A G+ +
Sbjct: 312 QAEAWHKMAADMGDEDAQFDIAQRYKNGDGLRMDFEQAAFWFEKSAKGGNIAAMAALASA 371
Query: 268 LEHGLGLFTEGEMMKAVVYLELATRAGETAADHV 301
+ G+GL + E A ++ E A G+T + +
Sbjct: 372 YDDGIGLGKDDE--AASLWYERAALEGDTESQFI 403
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISL-YRQAA 164
+R+K+G G+R + ++A F K A G+ AM Y + + K + A SL Y +AA
Sbjct: 334 QRYKNGDGLRMDFEQAAFWFEKSAKGGNIAAMAALASAYDDGIGLGKDDEAASLWYERAA 393
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+ GD +Q N +AV+ A+ H+ A Y+LA +G G D N
Sbjct: 394 LEGDTESQFIIATRYEAGIGILRNPGKAVQFYTLAAEKSHIEASYRLARLYDQGIGTDEN 453
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
EAA+WYLRAA G+ A Y G G+ QAR+++ AA+ G +Q
Sbjct: 454 PAEAAKWYLRAASSGHGPAQAMMGRLYMLGRGVDKDIIQAREFLAIAAEKGDDVSQ 509
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 32/248 (12%)
Query: 74 ASFTLPQLR-AASLVCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALD 126
A FTL Q+R A+R R+A + G V++++ +A
Sbjct: 976 AEFTLGQMRLNGEGSAADPEQAIRHFRKAADNDHMLAQYTLADLLHMGTVVKQDMTEAAY 1035
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQA 186
+ + A +G +A L+Y D + + Y QAA + AA+
Sbjct: 1036 YYEQAAKQGYMMAQYRTALLY---DTGKGGLKGYTQAAQFYELAAKQ------------- 1079
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
GHV +Q+ LA+ L G G+ ++++AA WY +AAE G + A + + Y G G+
Sbjct: 1080 ---GHVPSQHNLAILLENGLGLKADMEQAAYWYGQAAEKGDMNAQHALGMMYDAGRGVEQ 1136
Query: 247 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 301
S+ +A +A+ GH ++Q+ G+ ++ +G + +KA ++ +A G A
Sbjct: 1137 SYTRAADLYLASAEQGHIESQVSLGV-VYVKGKDAVQDYIKAHMWFNIAAAQGNRTARDY 1195
Query: 302 KNVILQQL 309
++ I +++
Sbjct: 1196 RDRIAKRM 1203
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDKKEAAISLYR 161
G+ + GRGV K++ +A + A +G ++ D G E D A Y+
Sbjct: 477 GRLYMLGRGVDKDIIQAREFLAIAAEKGDDVSQYLLAEFYDIGEGLLEDDT--LAAKFYK 534
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+A G AQ + E A+ A+ G AQ +LA G GV
Sbjct: 535 LSADQGYAPAQYKLGQIYAAGRGLKQDDELALSYFRLAAEQGLAAAQTKLAQIYEAGNGV 594
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
NL+ AA WY++AAE G + A + G G+ R + W AA+ G AQ
Sbjct: 595 KVNLKTAASWYVKAAEQGAMNAQIWLGFAHKTGTGVAKDSRLSADWFLLAANQGDAVAQF 654
Query: 269 EHG 271
E G
Sbjct: 655 ETG 657
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G AAQ + E+A + + S G V AQ LA G+GV+ +L +A W+ +AAE G
Sbjct: 85 GKDAAQRGDFEQAYDIWLKLSRRGDVSAQTSLAFLFKNGQGVERDLDKAVIWFTQAAERG 144
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A L Y G+G+ + A K+ + AA+ G +Q
Sbjct: 145 DATAQNMLGLFYYSGQGVKQNFTTAAKYYQMAAEQGDRDSQ 185
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 23/215 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV+ NL A ++K A +G+ A + W + + + + + D
Sbjct: 588 YEAGNGVKVNLKTAASWYVKAAEQGAMNAQI------WLGFAHKTGTGVAKDSRLSADWF 641
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
AN +AV AQ++ G G+ ++ EA W+ +AA+ ++ +
Sbjct: 642 LLAANQGDAV-------------AQFETGTAYESGTGLKEDIAEAMFWFEQAAQQNHIES 688
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVY 286
Y + Y G G+ + W+K AAD H +A G G TE + AV Y
Sbjct: 689 QYRVGMGYLQGNGVTADDMASFNWLKLAADQDHKQAARHLGDLLRTGRGTEINIADAVFY 748
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
A A A + +IL A+ D + +V
Sbjct: 749 YRRAADANIMEAQYQLAMILGGPGASEADISEAIV 783
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
YR A + N EA K +A+ +GH AQ + GRGVD ++ +A +
Sbjct: 438 YRLARLYDQGIGTDENPAEAAKWYLRAASSGHGPAQAMMGRLYMLGRGVDKDIIQAREFL 497
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
AAE G + Y + Y GEGL A K+ K +AD G+ AQ + G ++ G
Sbjct: 498 AIAAEKGDDVSQYLLAEFYDIGEGLLEDDTLAAKFYKLSADQGYAPAQYKLGQ-IYAAGR 556
Query: 280 MMK-----AVVYLELATRAGETAA 298
+K A+ Y LA G AA
Sbjct: 557 GLKQDDELALSYFRLAAEQGLAAA 580
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
LY A+ G A A+ E+ A+ GHV A Y LA GRGV+ N EAAR+
Sbjct: 839 LYDGGAIDGKTATDAADYYES------AARNGHVGAHYYLARLYDDGRGVEQNYAEAARY 892
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
Y A+ Y A + + G G+ ++ + AA G +AQL G + +G
Sbjct: 893 YELPADQLYADAAWRLGVMAREGLGIAINAEVMEQRFLAAASQGDVRAQLALGKA-YRKG 951
Query: 279 EMM-----KAVVYLELA 290
+M+ +A+ +L LA
Sbjct: 952 DMLSQNYEQAIAFLRLA 968
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 42/191 (21%)
Query: 134 RGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVR 193
RG+ + + DA Y + Y+ A +LG P A A+ EA+ L +A+ G R
Sbjct: 736 RGTEINIADAVFYYRRAADANIMEAQYQLAMILGGPGASEADISEAIVLYDKAAQQGDSR 795
Query: 194 AQYQLALCLHRGRGV----------------------DFNL--------------QEAAR 217
+Q L + G V F L +AA
Sbjct: 796 SQLILGIYFDEGSVVPADKTKAATYLEMAAAQDITEAQFRLAQLYDGGAIDGKTATDAAD 855
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHG 271
+Y AA G+V A Y + Y G G+ ++ +A ++ + AD + A G
Sbjct: 856 YYESAARNGHVGAHYYLARLYDDGRGVEQNYAEAARYYELPADQLYADAAWRLGVMAREG 915
Query: 272 LGLFTEGEMMK 282
LG+ E+M+
Sbjct: 916 LGIAINAEVME 926
>gi|189502324|ref|YP_001958041.1| hypothetical protein Aasi_0954 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497765|gb|ACE06312.1| hypothetical protein Aasi_0954 [Candidatus Amoebophilus asiaticus
5a2]
Length = 838
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K G+GV N +KA++ + K A +G+T+A + G++Y ++E + Y
Sbjct: 395 GYIYKEGKGVDPNYEKAIEWYTKAADQGNTVAQYNLGIIY---KQEEGTVCDY------- 444
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+E++K L +A+ + AQ L + G+GV + Q+A WY++AA G
Sbjct: 445 ---------QESIKWLTKAANQKNSYAQTSLGHMYYHGKGVRQDYQKAIEWYIKAANQGN 495
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A + Y +G+ + +ARKW ++AA G +Q G+ ++ +G+
Sbjct: 496 RDAQDSLGYIYYNAKGVERDYEKARKWYEKAAKQGDRNSQTYLGI-MYKKGQ 546
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 78 LPQLRAASLVCKSWNDALRPLRE----AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA 133
+P L + + SW L+E LL + K+ K R+ + S +K A
Sbjct: 293 IPPLMQSLVDPFSWQGIQAKLQEDERYVYFLLHFSKQAKDHTIYRE-----IVSSVKAYA 347
Query: 134 R-GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHV 192
R G+TLA + GLMY KK + + ++A++ +A+ G++
Sbjct: 348 RAGNTLAQTNLGLMY----KKGLGVK---------------RDYKKAIEWYTKAANQGNI 388
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ L G+GVD N ++A WY +AA+ G A YN + Y EG ++++
Sbjct: 389 AAQNSLGYIYKEGKGVDPNYEKAIEWYTKAADQGNTVAQYNLGIIYKQEEGTVCDYQESI 448
Query: 253 KWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVV-YLELATRAGETAAD 299
KW+ +AA+ + AQ HG G+ + KA+ Y++ A + A D
Sbjct: 449 KWLTKAANQKNSYAQTSLGHMYYHGKGV--RQDYQKAIEWYIKAANQGNRDAQD 500
>gi|46445788|ref|YP_007153.1| hypothetical protein pc0154 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399429|emb|CAF22878.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 299
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A + G + +GRG+ ++ +A F A +G +A + G++Y ++
Sbjct: 109 DAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGVIYDNGQGITQSEQE 168
Query: 156 AISLYRQAAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCL 202
AI Y+ AA GD AQ AN + EA K A+ G AQY+L +
Sbjct: 169 AIKYYKLAADQGDADAQYNLGVIYANGQGITQSDAEAFKYFKLAADQGDADAQYELGVRY 228
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+G+ + EA +++ AA+ G A YN + YS G G+ S ++A K+ K AAD G
Sbjct: 229 ANGQGITQSDTEAFKYFKLAADQGDADAQYNLEVRYSNGRGVIQSDQEAFKYFKLAADQG 288
Query: 263 HGKAQLEHG 271
AQ E G
Sbjct: 289 DADAQYELG 297
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA K A+ GH AQY L + G+G+ + QEA ++Y AA+ G A YN +
Sbjct: 132 EAFKYFKLAADQGHAVAQYNLGVIYDNGQGITQSEQEAIKYYKLAADQGDADAQYNLGVI 191
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 292
Y+ G+G+ S +A K+ K AAD G AQ E G+ + G+ + +A Y +LA
Sbjct: 192 YANGQGITQSDAEAFKYFKLAADQGDADAQYELGV-RYANGQGITQSDTEAFKYFKLAAD 250
Query: 293 AGETAADH 300
G+ A +
Sbjct: 251 QGDADAQY 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQY+L + GRG+ + EA +++ AA+ G+ A YN + Y G+G+ S +
Sbjct: 108 GDAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGVIYDNGQGITQSEQ 167
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
+A K+ K AAD G AQ G+ ++ G+ + +A Y +LA G+ A +
Sbjct: 168 EAIKYYKLAADQGDADAQYNLGV-IYANGQGITQSDAEAFKYFKLAADQGDADAQY 222
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM- 281
A+ G +A Y + Y+ G G+ S +A K+ K AAD GH AQ G+ ++ G+ +
Sbjct: 105 ADQGDAKAQYKLGVIYANGRGITQSDTEAFKYFKLAADQGHAVAQYNLGV-IYDNGQGIT 163
Query: 282 ----KAVVYLELATRAGETAADHVKNVI 305
+A+ Y +LA G+ A + VI
Sbjct: 164 QSEQEAIKYYKLAADQGDADAQYNLGVI 191
>gi|255065895|ref|ZP_05317750.1| Sel1 repeat family protein [Neisseria sicca ATCC 29256]
gi|349609736|ref|ZP_08889113.1| hypothetical protein HMPREF1028_01088 [Neisseria sp. GT4A_CT1]
gi|255049806|gb|EET45270.1| Sel1 repeat family protein [Neisseria sicca ATCC 29256]
gi|348611304|gb|EGY60965.1| hypothetical protein HMPREF1028_01088 [Neisseria sp. GT4A_CT1]
Length = 286
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 85 SLVCKSWNDALRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
++ S N A R ++E L G + G G ++ ++A F K A +
Sbjct: 33 NISQNSENQAFRLIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAE 92
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKL---------------- 182
A + G++Y+E + YRQA + AA+ NAE A L
Sbjct: 93 AQFNLGIIYYE---GQGTAQDYRQAKFWWEKAAEQGNAEAAFDLGIIHYAGIGVPQDYIQ 149
Query: 183 ----LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
++A+ G AQ+ L L + G GV + + A W+ +AA+ G +A YN + Y
Sbjct: 150 AKTWFHKAADQGEDSAQFYLGLMYYSGEGVGQDYKLAKSWFEKAAKKGNAKAQYNLGIMY 209
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRA 293
+ G+G+ ++ +A+ W K+AA+ G+ AQ G+ L+ G+ +A + E A
Sbjct: 210 AEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGV-LYENGQGVTQNFTQAKSWFEKAAAQ 268
Query: 294 GETAADHVKNVILQQ 308
G T A H I+QQ
Sbjct: 269 GNTLAQHALEYIVQQ 283
>gi|422015298|ref|ZP_16361897.1| hypothetical protein OOA_11118 [Providencia burhodogranariea DSM
19968]
gi|414099463|gb|EKT61104.1| hypothetical protein OOA_11118 [Providencia burhodogranariea DSM
19968]
Length = 262
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + G+GV ++ A F+K +G+ A G MY A+S A+L
Sbjct: 52 GESYFTGKGVSQDFKVAAQWFIKAGNQGNADAQFRLGTMY----VNGFAVSRDYDKAILW 107
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA N RA+ +A +G GV ++++AA W+ +AA+GG
Sbjct: 108 YEAAAKQN---------------DTRAETNMATMYAQGLGVTQDIEKAAYWFKKAAQGGN 152
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----- 282
V A +N + YS G G+ L + +A W ++AA K+Q G+ +++EG+ +K
Sbjct: 153 VIAQFNLAQMYSVGNGVDLDNTKAVFWYRKAAQQRDAKSQDRLGV-MYSEGKGVKKNLQQ 211
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
A +L A +G + ++ I QLS + +A + D++
Sbjct: 212 AYAWLSTAVYSGNKESHKLQEKIANQLSDSELKQAQKLADNY 253
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G V ++ DKA+ + A + T A + MY A
Sbjct: 85 FRLGTMYVNGFAVSRDYDKAILWYEAAAKQNDTRAETNMATMY---------------AQ 129
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG + E+A +A+ G+V AQ+ LA G GVD + +A WY +AA+
Sbjct: 130 GLG----VTQDIEKAAYWFKKAAQGGNVIAQFNLAQMYSVGNGVDLDNTKAVFWYRKAAQ 185
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
++ + YS G+G+ + +QA W+ A G+
Sbjct: 186 QRDAKSQDRLGVMYSEGKGVKKNLQQAYAWLSTAVYSGN 224
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ+ L G+GV + + AA+W+++A G A + Y G + +
Sbjct: 43 GDPKAQFLLGESYFTGKGVSQDFKVAAQWFIKAGNQGNADAQFRLGTMYVNGFAVSRDYD 102
Query: 250 QARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAA 298
+A W + AA +A+ + GL ++ KA + + A + G A
Sbjct: 103 KAILWYEAAAKQNDTRAETNMATMYAQGLGVTQDIEKAAYWFKKAAQGGNVIA 155
>gi|421674889|ref|ZP_16114817.1| Sel1 repeat protein [Acinetobacter baumannii OIFC065]
gi|421692982|ref|ZP_16132631.1| Sel1 repeat protein [Acinetobacter baumannii IS-116]
gi|404559245|gb|EKA64510.1| Sel1 repeat protein [Acinetobacter baumannii IS-116]
gi|410383577|gb|EKP36106.1| Sel1 repeat protein [Acinetobacter baumannii OIFC065]
Length = 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y E K + A Y +AA GD A
Sbjct: 80 KDIQADILKAIEWYTLSANQGYVNAQYNLGLLYKGNEYIKPDYVKAKYWYEKAAAQGDIA 139
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ + ++A+K A+ AG AQ LA GRGV N EA++
Sbjct: 140 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 199
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ AQ G G
Sbjct: 200 WYLKAAVQGDIDAQYNLGLMYFLGDGIKQDYSQAQKWFLAAANQEESNAQYHLGKIYKDG 259
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 310
L + ++ A +L+ + AG + A LQ+LS
Sbjct: 260 LGVDKDLSLARTWLKKSAEAGNSYA-------LQELS 289
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G++++ KA+ +L A G + A + M+ + G
Sbjct: 145 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMF-----------------LHG 187
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q N EA + +A++ G + AQY L L G G+ + +A +W+L AA
Sbjct: 188 RGVTQ--NKLEASQWYLKAAVQGDIDAQYNLGLMYFLGDGIKQDYSQAQKWFLAAANQEE 245
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
A Y+ Y G G+ AR W+K++A+ G+ A
Sbjct: 246 SNAQYHLGKIYKDGLGVDKDLSLARTWLKKSAEAGNSYA 284
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 19/121 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F HGRGV +N +A +LK A +G A + GLMY+ LGD
Sbjct: 184 FLHGRGVTQNKLEASQWYLKAAVQGDIDAQYNLGLMYF-----------------LGDGI 226
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q + +A K A+ AQY L G GVD +L A W ++AE G A
Sbjct: 227 KQ--DYSQAQKWFLAAANQEESNAQYHLGKIYKDGLGVDKDLSLARTWLKKSAEAGNSYA 284
Query: 231 M 231
+
Sbjct: 285 L 285
>gi|440298641|gb|ELP91272.1| serine-threonine protein kinase, putative [Entamoeba invadens IP1]
Length = 937
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 111 FKHGRGVRKNLDKALDSF--LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
+++G+GV ++DK L + A GS++ M + G Y +GD
Sbjct: 721 YEYGKGV--SVDKQLSRYWTQTSATNGSSVGMFNVGCWYQ-----------------VGD 761
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
AQ +N A K +++ AG V L C G GV + + +W+L+A+E G
Sbjct: 762 GVAQDSNT--AFKWFKKSAKAGGVSGMCSLGKCYFCGEGVKEDKSKGVKWFLKASENGNG 819
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
AMYN + CY +G+G+ S A +W ++ G+ KA+L G
Sbjct: 820 TAMYNLANCYYYGDGVEKSISSALQWSEKGMGVGYIKAELMFG 862
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 19/150 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
+G K+ A++ F + GS M + + Y+ D
Sbjct: 651 NGETGEKDYVSAVECFKRSGMMGSKEGMYNLAVCYFNGD-------------------GV 691
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N E V L Q++ G AQ LA C G+GV + Q + W +A G M+
Sbjct: 692 PMNNVEGVTYLKQSAALGDSEAQCLLASCYEYGKGVSVDKQLSRYWTQTSATNGSSVGMF 751
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N Y G+G+ A KW K++A G
Sbjct: 752 NVGCWYQVGDGVAQDSNTAFKWFKKSAKAG 781
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 145 LMYWEMDKKEAAISLYRQAAVLGD-------------PAAQPANAEEAVKLLYQASIAGH 191
+M + + + A+ L++ ++V G+ A + A+ +A+I G
Sbjct: 579 MMQQDSESSKTALQLFQSSSVSGNMDGTNNCGVLYALGATGKIEMKTAMTFFEKAAIGGC 638
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
A+ + L G + + A + R+ G MYN ++CY G+G+P+++ +
Sbjct: 639 GAAENNRGVLLFNGETGEKDYVSAVECFKRSGMMGSKEGMYNLAVCYFNGDGVPMNNVEG 698
Query: 252 RKWMKRAADCGHGKAQL------EHGLGLFTEGEM 280
++K++A G +AQ E+G G+ + ++
Sbjct: 699 VTYLKQSAALGDSEAQCLLASCYEYGKGVSVDKQL 733
>gi|424845479|ref|ZP_18270090.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
gi|363986917|gb|EHM13747.1| TPR repeat-containing protein [Jonquetella anthropi DSM 22815]
Length = 293
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLY 160
R G + G GV K+ K L + +A G A G Y +D+ +A LY
Sbjct: 38 RLGWAYMIGDGVEKDQQKGLTWLNRASAAGDPEAQFMLGCCYHFGMAVPIDRAKAQ-ELY 96
Query: 161 RQAA---------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
R AA GD A+ N EAVK +A+ GH RA + LALC G
Sbjct: 97 RSAAGSGHAGAAFNLGNMYYFGDGVAE--NRAEAVKWFEEAASRGHARAMFSLALCCASG 154
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + +AA WY +AAE G RA ++ Y G+G+P +A W K AA+ G +
Sbjct: 155 DGVAPDKAKAAEWYAKAAEAGDPRAQFHLGSAYETGDGVPRDRVKALSWYKAAAEGGDPR 214
Query: 266 AQ 267
AQ
Sbjct: 215 AQ 216
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GV +N +A+ F + A+RG AM L D K A Y +A
Sbjct: 112 GNMYYFGDGVAENRAEAVKWFEEAASRGHARAMFSLALCCASGDGVAPDKAKAAEWYAKA 171
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A GDP RAQ+ L G GV + +A WY AA
Sbjct: 172 AEAGDP-----------------------RAQFHLGSAYETGDGVPRDRVKALSWYKAAA 208
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
EGG RA + + + +QA W R
Sbjct: 209 EGGDPRAQETLARLFVEAQDGTADPQQAYYWACR 242
>gi|260753360|ref|YP_003226253.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552723|gb|ACV75669.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 375
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ+ L RG+GV N + A WY +AA+ G+V+A N Y +G G+P + +
Sbjct: 76 GHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQ 135
Query: 250 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
A W++RAA G AQ G GL T E A ++ + A G A++ V+
Sbjct: 136 AALTWLQRAAGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVM 195
Query: 306 LQQLSATSRDRA 317
Q ++D A
Sbjct: 196 YSQGQGVTQDMA 207
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 85 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 144
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + A +A+ G+ A+Y L + +G+GV
Sbjct: 145 AGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQ 204
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 205 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLN 263
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 157 GDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKA 216
Query: 164 AVLGDPAA-----------QPANAEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 209
A PAA Q ++ V L + +A+ G V+AQ LA L H+ +G
Sbjct: 217 ADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLNLASLLYHQAKGKS 276
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N +EAA WY +AA G V A++ GEG + A W AA G
Sbjct: 277 QNYKEAALWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 329
>gi|56550964|ref|YP_161803.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542538|gb|AAV88692.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 375
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ+ L RG+GV N + A WY +AA+ G+V+A N Y +G G+P + +
Sbjct: 76 GHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQ 135
Query: 250 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
A W++RAA G AQ G GL T E A ++ + A G A++ V+
Sbjct: 136 AALTWLQRAAGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVM 195
Query: 306 LQQLSATSRDRA 317
Q ++D A
Sbjct: 196 YSQGQGVTQDMA 207
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 85 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 144
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + A +A+ G+ A+Y L + +G+GV
Sbjct: 145 AGQGDKVAQTNLGDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQ 204
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 205 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLN 263
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 157 GDMYYQGLGTPQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKA 216
Query: 164 AVLGDPAA-----------QPANAEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 209
A PAA Q ++ V L + +A+ G V+AQ LA L H+ +G
Sbjct: 217 ADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLNLASLLYHQAKGKS 276
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N +EAA WY +AA G V A++ GEG + A W AA G
Sbjct: 277 QNYKEAALWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 329
>gi|448745716|ref|ZP_21727386.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
gi|445566444|gb|ELY22550.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
Length = 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 30/258 (11%)
Query: 95 LRPLRE-----AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
RPL E A LL G + GRGV +N +KA D A + +A + G +Y
Sbjct: 46 FRPLAEEGNPDAQALL--GGMYLRGRGVEQNFEKAADWLKLAADQNDAIAQNNLGWLYQN 103
Query: 150 -----MDKKEAAISLYRQAAVLGDPAAQPANAE-------------EAVKLLYQASIAGH 191
D +EA + Y QAA G AQ A+ +A + A+ G
Sbjct: 104 GRGVSRDFQEA-MRWYHQAADQGMAGAQQNLAQMYYYGRGVKRDYTKAARWFELAAEQGL 162
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
V++Q L + GRGV N +EAA+WY AAE G + YN ++ + G G+ ++ A
Sbjct: 163 VKSQDYLGDMYYHGRGVANNHEEAAKWYTLAAEQGSQGSQYNIAVMHVQGLGVEKNYETA 222
Query: 252 RKWMKRAADCG--HGKAQLE--HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
W AA G H + L +G GL E ++ A VY LA G+ + ++
Sbjct: 223 AMWYHHAASQGDKHALSNLSSLYGQGLGVEENVVLAYVYASLAADLGDDSGAENRDFAAS 282
Query: 308 QLSATSRDRAMLVVDSWR 325
L++ +V+ W+
Sbjct: 283 LLNSDQIAEGDRLVEEWQ 300
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ +R A G+P AQ N E+A L A+ AQ L
Sbjct: 42 ALKNFRPLAEEGNPDAQALLGGMYLRGRGVEQNFEKAADWLKLAADQNDAIAQNNLGWLY 101
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRGV + QEA RWY +AA+ G A N + Y +G G+ + +A +W + AA+ G
Sbjct: 102 QNGRGVSRDFQEAMRWYHQAADQGMAGAQQNLAQMYYYGRGVKRDYTKAARWFELAAEQG 161
Query: 263 HGKAQ 267
K+Q
Sbjct: 162 LVKSQ 166
>gi|54293998|ref|YP_126413.1| hypothetical protein lpl1059 [Legionella pneumophila str. Lens]
gi|397666736|ref|YP_006508273.1| Sel1 domain-containing protein repeat-containing protein
[Legionella pneumophila subsp. pneumophila]
gi|53753830|emb|CAH15296.1| hypothetical protein lpl1059 [Legionella pneumophila str. Lens]
gi|307609828|emb|CBW99345.1| hypothetical protein LPW_11231 [Legionella pneumophila 130b]
gi|395130147|emb|CCD08383.1| Sel1 domain protein repeat-containing protein [Legionella
pneumophila subsp. pneumophila]
Length = 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EAM G + G+GV ++ KA+ F K A + ++ ++ G+MY +
Sbjct: 76 EAMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDRE 135
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI +AA G P A+ + N EA K L++A+ AQY LA+
Sbjct: 136 AIKWIHKAAAQGFPEAERSLGILYSTAENGQQNYVEAFKWLHKAAEKEDAIAQYNLAVMY 195
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+GV N EA +W+ +A + G + A L Y+ G + QA KW + AA G
Sbjct: 196 VTGKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQG 255
Query: 263 HGKAQLEHGLGLFTEGEMM----KAVVYLELATRAGETAADHV 301
AQ G+G ++ KA+ + LA G A +V
Sbjct: 256 DAVAQYNIGIGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G+GVR+N +A+ F K G +A GLMY G Q
Sbjct: 198 GKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMY-----------------ATGSNVQQ- 239
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +A+K A+ G AQY + + G+GV N +A +W+ AA G +A Y
Sbjct: 240 -DDFQAMKWFRLAAKQGDAVAQYNIGIGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G LP + +A KW+++AA GH +AQ
Sbjct: 299 LAALYHDGVSLPQNSMEAIKWLRKAAAQGHLQAQ 332
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+G AQ N EAVK +A+ G AQ L L G+GV + +A +W+ +AA
Sbjct: 52 VIGKRVAQ--NDSEAVKWFCKAAKQGEAMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAAL 109
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ N + Y G G + R+A KW+ +AA G +A+ G+ L++ E
Sbjct: 110 QNDAVSQLNLGVMYQKGMGTQQNDREAIKWIHKAAAQGFPEAERSLGI-LYSTAE 163
>gi|432471064|ref|ZP_19713111.1| hypothetical protein A15M_01945 [Escherichia coli KTE206]
gi|430998282|gb|ELD14523.1| hypothetical protein A15M_01945 [Escherichia coli KTE206]
Length = 702
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 384 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 443
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 444 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 503
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 504 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 563
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 564 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 607
>gi|238022527|ref|ZP_04602953.1| hypothetical protein GCWU000324_02435 [Kingella oralis ATCC 51147]
gi|237867141|gb|EEP68183.1| hypothetical protein GCWU000324_02435 [Kingella oralis ATCC 51147]
Length = 363
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 23/221 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +A+ + K A +G A + G+MY + + AI+ Y++A
Sbjct: 59 GVMYEKGQGVAQDYQQAIAWYQKAANQGDAEAQFNLGVMYEKGQGVAQDYQQAIAWYQKA 118
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + ++A+ +A+ + AQ+ L + +G+GV
Sbjct: 119 ANQGVAEAQFNLGGMYYNGQGVAQDYQQALVWYQKAANQEYAAAQFNLGVMYSKGQGVAQ 178
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q A WY +AA G A YN S Y G G+ ++QA W ++AA+ G+ AQ
Sbjct: 179 SYQRALAWYQKAAHQGLAAAQYNLSRMYEDGRGVAQDYQQALAWYQKAANQGYSDAQFNL 238
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVIL 306
G+ ++ EG + +A+ + + A G+ A + V+
Sbjct: 239 GV-MYDEGRGVAQDYQQALAWYQKAANQGDAMAQYNLGVMY 278
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ GRGV ++ +AL + K A +G + A + G+MY D+ Y+QA A
Sbjct: 206 YEDGRGVAQDYQQALAWYQKAANQGYSDAQFNLGVMY---DEGRGVAQDYQQALAWYQKA 262
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A G AQY L + + GRGV N Q+A WY +AA G A
Sbjct: 263 ANQ----------------GDAMAQYNLGVMYYEGRGVAQNYQQALSWYQKAANQGVAGA 306
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKR 257
YN L Y+ G+G+ +QA+ W ++
Sbjct: 307 QYNLGLIYATGQGVAQDFQQAKAWWQK 333
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G+GV ++ +AL + K A + A + G+MY + + A++ Y++A
Sbjct: 131 GGMYYNGQGVAQDYQQALVWYQKAANQEYAAAQFNLGVMYSKGQGVAQSYQRALAWYQKA 190
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AAQ + ++A+ +A+ G+ AQ+ L + GRGV
Sbjct: 191 AHQGLAAAQYNLSRMYEDGRGVAQDYQQALAWYQKAANQGYSDAQFNLGVMYDEGRGVAQ 250
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q+A WY +AA G A YN + Y G G+ +++QA W ++AA+ G AQ
Sbjct: 251 DYQQALAWYQKAANQGDAMAQYNLGVMYYEGRGVAQNYQQALSWYQKAANQGVAGAQYNL 310
Query: 271 GLGLFTEGE 279
GL ++ G+
Sbjct: 311 GL-IYATGQ 318
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
A Q N ++A +L + G AQ+ L + +G+GV + Q+A WY +AA G
Sbjct: 29 AAYQAGNYKQAFRLWQPLAQQGDAEAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGDA 88
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A +N + Y G+G+ ++QA W ++AA+ G +AQ G G++ G+
Sbjct: 89 EAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGVAEAQFNLG-GMYYNGQ 138
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 26/166 (15%)
Query: 160 YRQAAVLGDPAAQPANAE------------EAVKLLYQASIA--------GHVRAQYQLA 199
Y+QA L P AQ +AE + V YQ +IA G AQ+ L
Sbjct: 36 YKQAFRLWQPLAQQGDAEAQFNLGVMYEKGQGVAQDYQQAIAWYQKAANQGDAEAQFNLG 95
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +G+GV + Q+A WY +AA G A +N Y G+G+ ++QA W ++AA
Sbjct: 96 VMYEKGQGVAQDYQQAIAWYQKAANQGVAEAQFNLGGMYYNGQGVAQDYQQALVWYQKAA 155
Query: 260 DCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADH 300
+ + AQ G+ ++++G+ +A+ + + A G AA +
Sbjct: 156 NQEYAAAQFNLGV-MYSKGQGVAQSYQRALAWYQKAAHQGLAAAQY 200
>gi|384411700|ref|YP_005621065.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932074|gb|AEH62614.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 632
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+ + +N +A F K A +G A ++ G +Y++ D +AA +L+++ A
Sbjct: 386 KYYEGKEISQNFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAA-TLFQKTA 444
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
P AQ P + ++A+ L QA+ G AQ+ L G+ V N
Sbjct: 445 DQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFILGYHYGTGKIVPLN 504
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
L++AA WY +AA G +R N + Y G G+P + A W+++AA KA++ G
Sbjct: 505 LKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQAAKSDDIKAEINLG 564
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G + +G V++N + + A G A + Y E D KE A + AA
Sbjct: 276 GAIYYNGEDVKQNKELGRYWIEQAAKWGDPEAQRITSMFYQESDTLEDKEKAEFWLKTAA 335
Query: 165 VLGDPAAQ-----------PANAE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ GD AQ P +E + +KLL + + G AQY AL + G+ +
Sbjct: 336 LAGDKEAQKQVSILYTNKDPKISEIHPQIIKLLREKAEKGDKEAQYDFALKYYEGKEISQ 395
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N ++AA W+ +AA+ G A N Y G+ +A ++ AD + KAQL
Sbjct: 396 NFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAATLFQKTADQNYPKAQLFL 455
Query: 271 GLGLFTEGE-----MMKAVVYLELATRAGETAADHV 301
G+ L+ GE KA+ + A GE A +
Sbjct: 456 GI-LYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
+ +G GV KN++K + + K G + G++YW D +E A+ +A
Sbjct: 135 YINGEGVPKNVEKGISWYKKAILSGDIDSARRLGMLYWMGDDVPRDQEKALHWLENSANN 194
Query: 167 GD-PAAQ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD A+Q P + E+ + L +++ G V +Q LA + G+ + + +
Sbjct: 195 GDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQGGVISQEILANLYYSGQMLPLDKK 254
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+AA WY +AA+ A Y GE + + R W+++AA G +AQ +
Sbjct: 255 KAAYWYEQAAKEHDGSAAKMLGAIYYNGEDVKQNKELGRYWIEQAAKWGDPEAQRITSM- 313
Query: 274 LFTEGEMM----KAVVYLELATRAGETAA 298
+ E + + KA +L+ A AG+ A
Sbjct: 314 FYQESDTLEDKEKAEFWLKTAALAGDKEA 342
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GD P + A+ +A+ G A + L + G GV ++ +AA W+ +AA G
Sbjct: 64 GDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGVPIDIAKAAYWFEKAANAG 123
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A + Y GEG+P + + W K+A G
Sbjct: 124 NWDAARRLATLYINGEGVPKNVEKGISWYKKAILSG 159
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVLGDPA 170
G+ K+ AL + + A G A GL+Y+ D I+ + +AA G+
Sbjct: 67 EGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGVPIDIAKAAYWFEKAANAGNWD 126
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
A P N E+ + +A ++G + + +L + G V + ++A
Sbjct: 127 AARRLATLYINGEGVPKNVEKGISWYKKAILSGDIDSARRLGMLYWMGDDVPRDQEKALH 186
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
W +A G A S Y GE +P + W++++A G G E L+
Sbjct: 187 WLENSANNGDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQG-GVISQEILANLYYS 245
Query: 278 GEMM-----KAVVYLELATRAGETAA 298
G+M+ KA + E A + + +A
Sbjct: 246 GQMLPLDKKKAAYWYEQAAKEHDGSA 271
>gi|323456548|gb|EGB12415.1| hypothetical protein AURANDRAFT_5055, partial [Aureococcus
anophagefferens]
Length = 228
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 128 FLKGAAR-GSTLAMVDAGLMYWEMD--KKEA--AISLYRQAAVLGDPAAQPA-------- 174
+LK AA G + A+++ G MY + D +K+ A+ LYR AA LG+ AQ
Sbjct: 1 YLKRAAGLGDSDAILELGTMYEDGDGVRKDIRKAMQLYRTAAELGEANAQQNVALLLVKE 60
Query: 175 ---NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
NA EAV A+ G A+Y LA C G GVD +L+EA RWY RAAE G +
Sbjct: 61 GEHNAVEAVHFYKLAAAQGLTEAEYNLATCYEEGTGVDVDLEEAKRWYARAAEKGDTDSE 120
Query: 232 YNTSLCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
LCY G G+ + +AR+W RAA G AQ G L+ EG
Sbjct: 121 VALGLCYDDVGRGVDVDFEEARRWYARAAAKGDPHAQNNLGF-LYQEG 167
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV +L++A + + A +G T + V GL Y ++ +
Sbjct: 91 YEEGTGVDVDLEEAKRWYARAAEKGDTDSEVALGLCYDDVGR------------------ 132
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ EEA + +A+ G AQ L G GV+ + EA R Y AA G A
Sbjct: 133 GVDVDFEEARRWYARAAAKGDPHAQNNLGFLYQEGNGVEVDFDEAKRLYELAAAQGDDFA 192
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N Y+ G G+ + +A++W +RAA G+ +A
Sbjct: 193 ECNLGDLYADGLGVDVDLEEAKRWYERAASQGNEEA 228
>gi|384411679|ref|YP_005621044.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932053|gb|AEH62593.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 375
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ+ L RG+GV N + A WY +AA+ G+V+A N Y +G G+P + +
Sbjct: 76 GHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQ 135
Query: 250 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
A W++RAA G AQ G GL T E A ++ + A G A++ V+
Sbjct: 136 AALTWLQRAAGQGDKVAQTNLGDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVM 195
Query: 306 LQQLSATSRDRA 317
Q ++D A
Sbjct: 196 YSQGQGVTQDMA 207
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 85 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 144
Query: 164 AVLGDPAAQP------------ANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ A + + YQ A+ G+ A+Y L + +G+GV
Sbjct: 145 AGQGDKVAQTNLGDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQ 204
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 205 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKIALAWYQKAADQGFVKAQLNL 264
Query: 271 GLGLFTEGE-----MMKAVVYLELATRAGETAA 298
L+ + + +AV++ + A G+ A
Sbjct: 265 ASLLYHQAKGKSQNYKEAVLWYQKAAAQGDVVA 297
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 157 GDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGQGVTQDMATAATWYQKA 216
Query: 164 AVLGDPAA-----------QPANAEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 209
A PAA Q ++ + L + +A+ G V+AQ LA L H+ +G
Sbjct: 217 ADQKFPAAEYNIAYLYEKGQGVVQDQKIALAWYQKAADQGFVKAQLNLASLLYHQAKGKS 276
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N +EA WY +AA G V A++ GEG + A W AA G
Sbjct: 277 QNYKEAVLWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 329
>gi|149277936|ref|ZP_01884075.1| hypothetical protein PBAL39_24640 [Pedobacter sp. BAL39]
gi|149231134|gb|EDM36514.1| hypothetical protein PBAL39_24640 [Pedobacter sp. BAL39]
Length = 828
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G G+ N +A + +GA +G TLA AG + E I +
Sbjct: 679 GLCYEYGIGIEPNAAEAFKYYQQGAEQGYTLAKYHAGKCFLE------GIGV-------- 724
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AN EEA A+ G AQY L +G+GV N +E W AAE Y
Sbjct: 725 -----KANPEEAFNYFKDAAGYGEAAAQYHAGHMLMQGKGVAMNKEEGLNWLNTAAEENY 779
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
A Y CY G+G+ +A W + AAD GH KA
Sbjct: 780 ANAQYALGNCYLMGDGVEEDEDRAMYWFELAADNGHEKA 818
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 89/237 (37%), Gaps = 60/237 (25%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
W L +A L G+ ++ G GV +N DKAL+ + + A G A V+ GL Y +
Sbjct: 520 EWYQKGAALNDANCLFAAGRCYRFGNGVEENPDKALEYYHRSAELGDPKAYVELGLCYEQ 579
Query: 150 -----MDKKEA----------------------------------AISLYRQAAVLGDPA 170
D ++A + L +AA G P
Sbjct: 580 EYGVSFDAQQAMDYMQRAADLDYYYGQYKLGYYYMHGLVTQDTKKGLELLEKAAEKGFPQ 639
Query: 171 A----------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A Q AN A+ QA G V + L LC G G++ N E
Sbjct: 640 AMLEIGDYYLYDYDDIDQSAN---AIGYYQQAQEQGVV--HHGLGLCYEYGIGIEPNAAE 694
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A ++Y + AE GY A Y+ C+ G G+ + +A + K AA G AQ G
Sbjct: 695 AFKYYQQGAEQGYTLAKYHAGKCFLEGIGVKANPEEAFNYFKDAAGYGEAAAQYHAG 751
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G+ +++G +L+KA+ F +G A GS +M + +Y E D ++A + QA
Sbjct: 430 GRIYRYGINGTPDLEKAIALFERGLAMGSPYSMTEMAFLYEDGTLEADYQKA-FDYFHQA 488
Query: 164 AVLGDPAA--------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A L P A Q + A + + + + C G GV+
Sbjct: 489 ATLDYPFAIHMTGTYLENGYHNQQPDPASAFEWYQKGAALNDANCLFAAGRCYRFGNGVE 548
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +A +Y R+AE G +A LCY G+ +QA +M+RAAD + Q +
Sbjct: 549 ENPDKALEYYHRSAELGDPKAYVELGLCYEQEYGVSFDAQQAMDYMQRAADLDYYYGQYK 608
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAG 294
G GL T+ + K + LE A G
Sbjct: 609 LGYYYMHGLVTQ-DTKKGLELLEKAAEKG 636
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 22/213 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYR 161
+ G + HG V ++ K L+ K A +G AM++ G Y + AI Y+
Sbjct: 608 KLGYYYMHGL-VTQDTKKGLELLEKAAEKGFPQAMLEIGDYYLYDYDDIDQSANAIGYYQ 666
Query: 162 QAAVLG------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
QA G +P NA EA K Q + G+ A+Y C G GV
Sbjct: 667 QAQEQGVVHHGLGLCYEYGIGIEP-NAAEAFKYYQQGAEQGYTLAKYHAGKCFLEGIGVK 725
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +EA ++ AA G A Y+ G+G+ ++ + W+ AA+ + AQ
Sbjct: 726 ANPEEAFNYFKDAAGYGEAAAQYHAGHMLMQGKGVAMNKEEGLNWLNTAAEENYANAQYA 785
Query: 270 HG----LGLFTEGEMMKAVVYLELATRAGETAA 298
G +G E + +A+ + ELA G A
Sbjct: 786 LGNCYLMGDGVEEDEDRAMYWFELAADNGHEKA 818
>gi|421661397|ref|ZP_16101573.1| Sel1 repeat protein [Acinetobacter baumannii OIFC110]
gi|408715809|gb|EKL60931.1| Sel1 repeat protein [Acinetobacter baumannii OIFC110]
Length = 290
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQAAVLGDPA 170
+ ++ ++ KA++ + A +G A + GL+Y E K + A Y +AA GD A
Sbjct: 78 KDIQADILKAIEWYTLSANQGYVNAQYNLGLLYKGNEYIKPDYVKAKYWYEKAAAQGDIA 137
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ + ++A+K A+ AG AQ LA GRGV N EA++
Sbjct: 138 SLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMFLHGRGVTQNKLEASQ 197
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
WYL+AA G + A YN L Y G+G+ + QA+KW AA+ AQ G G
Sbjct: 198 WYLKAAVQGDIDAQYNLGLMYFLGDGIKQDYSQAQKWFLAAANQEESNAQYHLGKIYKDG 257
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 310
L + ++ A +L+ + AG + A LQ+LS
Sbjct: 258 LGVDKDLSLARTWLKKSAEAGNSYA-------LQELS 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G++++ KA+ +L A G + A + M+ + G
Sbjct: 143 GNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLATMF-----------------LHG 185
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q N EA + +A++ G + AQY L L G G+ + +A +W+L AA
Sbjct: 186 RGVTQ--NKLEASQWYLKAAVQGDIDAQYNLGLMYFLGDGIKQDYSQAQKWFLAAANQEE 243
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
A Y+ Y G G+ AR W+K++A+ G+ A
Sbjct: 244 SNAQYHLGKIYKDGLGVDKDLSLARTWLKKSAEAGNSYA 282
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 19/121 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F HGRGV +N +A +LK A +G A + GLMY+ LGD
Sbjct: 182 FLHGRGVTQNKLEASQWYLKAAVQGDIDAQYNLGLMYF-----------------LGDGI 224
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q + +A K A+ AQY L G GVD +L A W ++AE G A
Sbjct: 225 KQ--DYSQAQKWFLAAANQEESNAQYHLGKIYKDGLGVDKDLSLARTWLKKSAEAGNSYA 282
Query: 231 M 231
+
Sbjct: 283 L 283
>gi|340362624|ref|ZP_08684996.1| TPR repeat protein [Neisseria macacae ATCC 33926]
gi|339887146|gb|EGQ76732.1| TPR repeat protein [Neisseria macacae ATCC 33926]
Length = 286
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 85 SLVCKSWNDALRPLRE------AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
++ S N A R ++E L G + G G ++ ++A F K A +
Sbjct: 33 NISQNSENQAFRLIQEMAKQGDTRSQLDLGTMYAKGIGTTQDYEQAKYWFEKAAHNDNAE 92
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKL---------------- 182
A + G++Y+E + YRQA + AA+ NAE A L
Sbjct: 93 AQFNLGIIYYE---GQGTAQDYRQAKFWWEKAAEQGNAEAAFNLGIIHYAGIGVPQDYIQ 149
Query: 183 ----LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
++A+ G AQ+ L L + G GV + + A W+ +AA+ G +A YN + Y
Sbjct: 150 AKTWFHKAADQGEDSAQFYLGLMYYSGEGVVQDYKLAKSWFEKAAKKGNAKAQYNLGIMY 209
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRA 293
+ G+G+ ++ +A+ W K+AA+ G+ AQ G+ L+ G+ +A + E A
Sbjct: 210 AEGQGVTQNYPKAKYWYKKAAEQGNANAQNNLGV-LYENGQGVTQNFTQAKSWFEKAAAQ 268
Query: 294 GETAADHVKNVILQQ 308
G T A H I+QQ
Sbjct: 269 GNTLAQHALEYIVQQ 283
>gi|52841296|ref|YP_095095.1| hypothetical protein lpg1062 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|148360275|ref|YP_001251482.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|52628407|gb|AAU27148.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|148282048|gb|ABQ56136.1| TPR repeat protein [Legionella pneumophila str. Corby]
Length = 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EAM G + G+GV ++ KA+ F K A + ++ ++ G+MY +
Sbjct: 76 EAMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDRE 135
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI +AA G P A+ + N EA K L++A+ AQY LA+
Sbjct: 136 AIKWIHKAAAQGFPEAERSLGILYSTAENGQQNYVEAFKWLHKAAEKEDAIAQYNLAVMY 195
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+GV N EA +W+ +A + G + A L Y+ G + QA KW + AA G
Sbjct: 196 VTGKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQG 255
Query: 263 HGKAQLEHGLGLFTEGEMM----KAVVYLELATRAGETAADHV 301
AQ G+G ++ KA+ + LA G A +V
Sbjct: 256 DAVAQYNIGMGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G+GVR+N +A+ F K G +A GLMY G Q
Sbjct: 198 GKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMY-----------------ATGSNVQQ- 239
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +A+K A+ G AQY + + G+GV N +A +W+ AA G +A Y
Sbjct: 240 -DDFQAMKWFRLAAKQGDAVAQYNIGMGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G LP + +A KW+++AA GH +AQ
Sbjct: 299 LAALYHDGVSLPQNSMEAIKWLRKAAAQGHLQAQ 332
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+G AQ N EAVK +A+ G AQ L L G+GV + +A +W+ +AA
Sbjct: 52 VIGKRVAQ--NDSEAVKWFCKAAKQGEAMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAAL 109
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ N + Y G G + R+A KW+ +AA G +A+ G+ L++ E
Sbjct: 110 QNDAVSQLNLGVMYQKGMGTQQNDREAIKWIHKAAAQGFPEAERSLGI-LYSTAE 163
>gi|443709979|gb|ELU04399.1| hypothetical protein CAPTEDRAFT_223518 [Capitella teleta]
Length = 535
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A N EA +L AS G+ +A Y LA+C G+GV ++ +AA+ Y AA G ++
Sbjct: 252 ANKENYNEAFQLWEHASSKGYAKASYNLAICYETGKGVPQDMSQAAKLYHIAASQGCSKS 311
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG---EMMKAVVYL 287
+YN SL Y G G+ +A++ +++AA G +AQ E G+ ++TE +M KA
Sbjct: 312 LYNLSLMYMDGCGVTRDENKAKQLLEKAAASGLKQAQTELGV-IYTEHKHRDMQKAASLF 370
Query: 288 ELATRAGETAADHVKNVILQQ 308
A + ++AA + + +Q
Sbjct: 371 SWAAKQQDSAAQYYLGICYEQ 391
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD------KKEAAISLYRQAA 164
++ G+GV +++ +A + A++G + ++ + LMY MD + A L +AA
Sbjct: 283 YETGKGVPQDMSQAAKLYHIAASQGCSKSLYNLSLMY--MDGCGVTRDENKAKQLLEKAA 340
Query: 165 VLGDPAAQPA-----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ + ++A L A+ AQY L +C +G GV N
Sbjct: 341 ASGLKQAQTELGVIYTEHKHRDMQKAASLFSWAAKQQDSAAQYYLGICYEQGLGVPCNPC 400
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQ 267
+AA Y ++A GY+ A +N + + G GLP +A K + AA G +Q
Sbjct: 401 KAAELYRQSANAGYLSAYHNLAKLFEQGAAGLPEDRNEALKLYEMAAKKGCASSQ 455
>gi|260654116|ref|ZP_05859606.1| TPR repeat SEL1 family protein [Jonquetella anthropi E3_33 E1]
gi|260631101|gb|EEX49295.1| TPR repeat SEL1 family protein [Jonquetella anthropi E3_33 E1]
Length = 287
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLY 160
R G + G GV K+ K L + +A G A G Y +D+ +A LY
Sbjct: 32 RLGWAYMIGDGVEKDQQKGLTWLNRASAAGDPEAQFMLGCCYHFGMAVPIDRAKAQ-ELY 90
Query: 161 RQAA---------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
R AA GD A+ N EAVK +A+ GH RA + LALC G
Sbjct: 91 RSAAGSGHAGAAFNLGNMYYFGDGVAE--NRAEAVKWFEEAASRGHARAMFSLALCCASG 148
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + +AA WY +AAE G RA ++ Y G+G+P +A W K AA+ G +
Sbjct: 149 DGVAPDKAKAAEWYAKAAEAGDPRAQFHLGSAYETGDGVPRDRVKALSWYKAAAEGGDPR 208
Query: 266 AQ 267
AQ
Sbjct: 209 AQ 210
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GV +N +A+ F + A+RG AM L D K A Y +A
Sbjct: 106 GNMYYFGDGVAENRAEAVKWFEEAASRGHARAMFSLALCCASGDGVAPDKAKAAEWYAKA 165
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A GDP RAQ+ L G GV + +A WY AA
Sbjct: 166 AEAGDP-----------------------RAQFHLGSAYETGDGVPRDRVKALSWYKAAA 202
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
EGG RA + + + +QA W R
Sbjct: 203 EGGDPRAQETLARLFVEAQDGTADPQQAYYWACR 236
>gi|110641883|ref|YP_669613.1| hypothetical protein ECP_1709 [Escherichia coli 536]
gi|191171699|ref|ZP_03033246.1| putative TPR repeat protein [Escherichia coli F11]
gi|422377177|ref|ZP_16457420.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|433077845|ref|ZP_20264396.1| hypothetical protein WIU_01716 [Escherichia coli KTE131]
gi|110343475|gb|ABG69712.1| putative TPR repeat protein [Escherichia coli 536]
gi|190908029|gb|EDV67621.1| putative TPR repeat protein [Escherichia coli F11]
gi|324011514|gb|EGB80733.1| DnaJ domain protein [Escherichia coli MS 60-1]
gi|431597516|gb|ELI67422.1| hypothetical protein WIU_01716 [Escherichia coli KTE131]
Length = 649
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 510
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 554
>gi|325577670|ref|ZP_08147945.1| hypothetical protein HMPREF9417_0686 [Haemophilus parainfluenzae
ATCC 33392]
gi|325160415|gb|EGC72541.1| hypothetical protein HMPREF9417_0686 [Haemophilus parainfluenzae
ATCC 33392]
Length = 569
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAAQ 172
VR N D+ L+ A G A D + Y D+ E A Y+ AA GD AQ
Sbjct: 331 VRDNFDELLER----AKEGDLDAQKDLAMAYVRGDEIEQNNEEAFKWYKAAAEQGDADAQ 386
Query: 173 PA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ N+EEA+K L++++ GH A Y L G V + EA +WY
Sbjct: 387 NSLYNRYAKGEGVEQNSEEAMKWLHRSAEQGHGLAYYNLGFEYSSGDLVRKDELEAIKWY 446
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLF 275
+AA+ A Y Y++G+ + ++ AR++ + A +G+AQ E G+ GL
Sbjct: 447 KKAAKKDVTEAYYQLGFLYTYGDTIKKDYQSAREYYELAGGSWNGEAQNELGILHFNGLG 506
Query: 276 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
T + KA +Y +LA G + + T R+R
Sbjct: 507 TPKDNAKAFLYFQLAAENGSPEGMYNLGAMYDNGFGTKRNR 547
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 154 EAAISLYRQAAVLGDPAAQ-PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
E ++LY L + P N EA K L +A+ G A Y LA LH RG +
Sbjct: 173 EDLMTLYNNLGTLYNAHEDIPTNYAEAQKYLTKAAEMGLPNAMYGLA-NLHDFRG---DK 228
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA-----DCGHGKAQ 267
++A +WYL+AAE G + A Y Y GEG+ ++A KW++ AA D A+
Sbjct: 229 KQAFKWYLKAAENGLIDAYYYVGNAYKRGEGIQQDSQKALKWLELAAEYQMRDAARELAE 288
Query: 268 L-EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNV 304
+ + GLG + + KA + LA AGE V+ +
Sbjct: 289 IYQDGLGNVPQN-LEKAQAFYLLAKEAGENVERSVQQL 325
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 108 GKRFKHGRGVRKNLDKAL-------DSFLKGAARGSTLAMVDA-GLMYWEMDKKEAAISL 159
G +K G G++++ KAL + ++ AAR D G + ++K +A L
Sbjct: 251 GNAYKRGEGIQQDSQKALKWLELAAEYQMRDAARELAEIYQDGLGNVPQNLEKAQAFYLL 310
Query: 160 YRQAAVLGDPAAQPANAEEAVK----LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
++A + + Q + AV+ L + + G + AQ LA+ RG ++ N +EA
Sbjct: 311 AKEAGENVERSVQQLRSRLAVRDNFDELLERAKEGDLDAQKDLAMAYVRGDEIEQNNEEA 370
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL- 274
+WY AAE G A + Y+ GEG+ + +A KW+ R+A+ GHG A + LG
Sbjct: 371 FKWYKAAAEQGDADAQNSLYNRYAKGEGVEQNSEEAMKWLHRSAEQGHGLAY--YNLGFE 428
Query: 275 FTEGEMMK 282
++ G++++
Sbjct: 429 YSSGDLVR 436
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 21/176 (11%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKE-AAISLYRQAA- 164
R+ G GV +N ++A+ + A +G LA + G Y D K E AI Y++AA
Sbjct: 392 RYAKGEGVEQNSEEAMKWLHRSAEQGHGLAYYNLGFEYSSGDLVRKDELEAIKWYKKAAK 451
Query: 165 --------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
GD + + L S G AQ +L + G G
Sbjct: 452 KDVTEAYYQLGFLYTYGDTIKKDYQSAREYYELAGGSWNG--EAQNELGILHFNGLGTPK 509
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ +A ++ AAE G MYN Y G G + + A +W K++ + G+ KA
Sbjct: 510 DNAKAFLYFQLAAENGSPEGMYNLGAMYDNGFGTKRNRKFATQWFKKSCEAGYEKA 565
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 85 SLVCKSWNDALRPLR------EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTL 138
+L C + ++L L+ +A + + G+ + G+G + DKA+ + + A G L
Sbjct: 7 NLFCSTDKNSLEALKQHAEQGDAEAIYQLGRVYALGKGEEVDYDKAMTLYHRANALGYPL 66
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA----------------NAEEAVKL 182
A + G +Y +M + E ++ + Q GD A + E +K
Sbjct: 67 AANNIGALYDDMGEPEKSVEWFEQGIRQGDKRATISLGRFYLLGIGVEQDTFKGVEMLKK 126
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY------VRAMYNT-S 235
+A ++ AQ + G V N +A +YL A + + +YN
Sbjct: 127 YDNDGLASYLLAQVYDGVI---GYEVPINYPKALEYYLLAEKNKQDLTNEDLMTLYNNLG 183
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCG 262
Y+ E +P ++ +A+K++ +AA+ G
Sbjct: 184 TLYNAHEDIPTNYAEAQKYLTKAAEMG 210
>gi|189500441|ref|YP_001959911.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobium phaeobacteroides BS1]
gi|189495882|gb|ACE04430.1| Sel1 domain protein repeat-containing protein [Chlorobium
phaeobacteroides BS1]
Length = 528
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + G+GV +N +A F A +G A + GL+Y+ + D EAA +
Sbjct: 86 GQLYATGKGVTQNHTEAAKWFRMAAEQGHAKAQSNLGLIYFSNQGVQQDYVEAA-KWFGM 144
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ N + A +L A+ +AQ+ L + G+GV+
Sbjct: 145 AADQGHTRAQFFLGRMYYSGEGVTKNHKTAARLFQLAAKNNDAKAQHNLGVMYAEGQGVE 204
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N EAARWY ++AE G A ++ + +S G G+ ++ +A KW+ A++ GH +AQL+
Sbjct: 205 QNYTEAARWYRKSAEQGDPDAAFHLGMLFSGGRGVAQNNAEAFKWLHIASEKGHTQAQLQ 264
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GD Q N +AVK A+ G++ AQ L G+GV N EAA+W+ AAE G
Sbjct: 56 GDGVEQ--NYTKAVKWYRVAADQGNMIAQNNLGQLYATGKGVTQNHTEAAKWFRMAAEQG 113
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM----- 281
+ +A N L Y +G+ + +A KW AAD GH +AQ G ++ GE +
Sbjct: 114 HAKAQSNLGLIYFSNQGVQQDYVEAAKWFGMAADQGHTRAQFFLGR-MYYSGEGVTKNHK 172
Query: 282 KAVVYLELATRAGETAADHVKNVI 305
A +LA + + A H V+
Sbjct: 173 TAARLFQLAAKNNDAKAQHNLGVM 196
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
K L + G+ Q +L G GV+ N +A +WY AA+ G + A N Y+
Sbjct: 32 KTLLSDASQGNEEHQLKLGFIYANGDGVEQNYTKAVKWYRVAADQGNMIAQNNLGQLYAT 91
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGET 296
G+G+ +H +A KW + AA+ GH KAQ GL F+ + + ++A + +A G T
Sbjct: 92 GKGVTQNHTEAAKWFRMAAEQGHAKAQSNLGLIYFSNQGVQQDYVEAAKWFGMAADQGHT 151
Query: 297 AA 298
A
Sbjct: 152 RA 153
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ G RAQYQL GRGVD N+++AA WY +AAE G A
Sbjct: 469 AAEKGLPRAQYQLGNIFAEGRGVDKNVEKAAEWYRKAAEQGLEEA 513
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G A +LA L GRG + N EA WY +AAE A + + G G
Sbjct: 361 AAQEGDSEAALKLADMLSEGRGGEQNDAEARSWYQKAAEMETGEAAFKLAGMIIEGRGGK 420
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL 272
S+ R W K+AA + +A L+ G
Sbjct: 421 QSNSDGRSWYKKAAAMEYSEAALQLGF 447
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
A ++LA + GRG + + WY +AA Y A Y G+ P ++ AR
Sbjct: 404 EAAFKLAGMIIEGRGGKQSNSDGRSWYKKAAAMEYSEAALQLGFMYQAGKNAPRNNWLAR 463
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEG 278
+W AA+ G +AQ + G +F EG
Sbjct: 464 QWFLVAAEKGLPRAQYQLG-NIFAEG 488
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ A QL G+ N A +W+L AAE G RA Y ++ G G+ + +
Sbjct: 438 YSEAALQLGFMYQAGKNAPRNNWLARQWFLVAAEKGLPRAQYQLGNIFAEGRGVDKNVEK 497
Query: 251 ARKWMKRAADCG 262
A +W ++AA+ G
Sbjct: 498 AAEWYRKAAEQG 509
>gi|334131555|ref|ZP_08505317.1| hypothetical protein METUNv1_02379 [Methyloversatilis universalis
FAM5]
gi|333443028|gb|EGK70993.1| hypothetical protein METUNv1_02379 [Methyloversatilis universalis
FAM5]
Length = 286
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E+++ L +A+ GHVRAQY+LAL GRG + A RW++ AA G+V A Y+
Sbjct: 127 ESIRWLERAAEQGHVRAQYELALAYKLGRGTLQDYPAAGRWFMAAARNGHVGAQYHMGRL 186
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ GEG+P +A W RAA GHG A+
Sbjct: 187 HRIGEGVPADLIRAYAWFNRAAAQGHGAAR 216
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 190 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + L +G G +L E+ RW RAAE G+VRA Y +L Y G G +
Sbjct: 102 GDPEAQYSYGMMLSQGGSGKAEDLAESIRWLERAAEQGHVRAQYELALAYKLGRGTLQDY 161
Query: 249 RQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNV 304
A +W AA GH AQ H +G ++++A + A G AA ++
Sbjct: 162 PAAGRWFMAAARNGHVGAQYHMGRLHRIGEGVPADLIRAYAWFNRAAAQGHGAARGARDE 221
Query: 305 ILQQL 309
I L
Sbjct: 222 IAASL 226
>gi|398948454|ref|ZP_10672807.1| TPR repeat-containing protein [Pseudomonas sp. GM33]
gi|398160685|gb|EJM48948.1| TPR repeat-containing protein [Pseudomonas sp. GM33]
Length = 401
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N EA +A+ G AQY+L + G+GV N ++AA WYL++AE Y+ A+
Sbjct: 272 PKNPTEAFSWYLKAASQGSAEAQYKLGELYYEGKGVPQNYKQAASWYLKSAEQKYLSAIR 331
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+ CY+FGEG+ ++QA W G A +G G FTE
Sbjct: 332 ALANCYAFGEGVTQDYKQAYVW------ASLGAAIDTYGFGNFTE 370
>gi|163796472|ref|ZP_02190432.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
gi|159178322|gb|EDP62866.1| Sel1 domain protein repeat-containing protein [alpha
proteobacterium BAL199]
Length = 829
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
+A+P + ++A +++I G AQY L + RG G+ + A WY AAE G+
Sbjct: 610 SAEPPDFQQAANWFRESAIQGVPNAQYNLGVLYERGLGLPQDDTRALLWYHSAAEQGHPL 669
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A YN + YS G G+PLS+ ++ +W +RAA+ G A E GLGL
Sbjct: 670 AQYNLGVLYSAGRGIPLSYTESARWFRRAAERGVPAAAYNLAVLTESGLGL 720
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+R++A+ G P AQ P + A+ + A+ GH AQY L + GR
Sbjct: 623 FRESAIQGVPNAQYNLGVLYERGLGLPQDDTRALLWYHSAAEQGHPLAQYNLGVLYSAGR 682
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
G+ + E+ARW+ RAAE G A YN ++ G GL +A +W++RAA+ GH +A
Sbjct: 683 GIPLSYTESARWFRRAAERGVPAAAYNLAVLTESGLGLTRDAAEAERWLRRAAELGHSEA 742
Query: 267 Q 267
+
Sbjct: 743 K 743
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q+AA W+ +A G A YN + Y G GLP +A W AA+ GH AQ
Sbjct: 615 DFQQAANWFRESAIQGVPNAQYNLGVLYERGLGLPQDDTRALLWYHSAAEQGHPLAQYNL 674
Query: 271 GLGLFTEG 278
G+ L++ G
Sbjct: 675 GV-LYSAG 681
>gi|56550925|ref|YP_161764.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542499|gb|AAV88653.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 632
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+ + ++ +A+ F K A +G A ++ G +Y++ D +AA +L+++ A
Sbjct: 386 KYYEGKEISQDFKQAVYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAA-TLFQKTA 444
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
P AQ P + ++A+ L QA+ G AQ+ L G+ V N
Sbjct: 445 DQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFILGYHYGTGKIVPLN 504
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
L++AA WY +AA G +R N + Y G G+P + A W+++AA KA++ G
Sbjct: 505 LKKAASWYTKAAHTGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQAAKSDDIKAEINLG 564
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ-------------P 173
A +G A D L Y+E D K+A + +++AA GDP+A
Sbjct: 372 AEKGDKEAQYDFALKYYEGKEISQDFKQA-VYWFQKAADQGDPSATLNLGALYYDGKLGK 430
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +A L + + + +AQ L + RG GV + Q+A Y +AA G A +
Sbjct: 431 TDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 289
Y G+ +PL+ ++A W +AA G + Q+ G LG ++ A+ +L+
Sbjct: 491 LGYHYGTGKIVPLNLKKAASWYTKAAHTGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQ 550
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
A ++ + A+ + L ++ A +++ + +D+
Sbjct: 551 AAKSDDIKAE----INLGKIYADPKNQEIFALDT 580
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G + +G V++N + + A G A + Y E D KE A + AA
Sbjct: 276 GAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSMFYQESDTLEDKEKAEFWLKTAA 335
Query: 165 VLGDPAAQ-----------PANAE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ GD AQ P +E + +KLL + + G AQY AL + G+ +
Sbjct: 336 LAGDKEAQKQVSILYTNKDPKISEIHPQIIKLLREKAEKGDKEAQYDFALKYYEGKEISQ 395
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A W+ +AA+ G A N Y G+ +A ++ AD + KAQL
Sbjct: 396 DFKQAVYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAATLFQKTADQNYPKAQLFL 455
Query: 271 GLGLFTEGE-----MMKAVVYLELATRAGETAADHV 301
G+ L+ GE KA+ + A GE A +
Sbjct: 456 GI-LYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 490
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
+ +G GV KN++K + + K G + G++YW D +E A+ +A
Sbjct: 135 YINGEGVPKNVEKGISWYKKAIQSGDIDSARRLGMLYWMGDDVPRDQEKALHWLENSANN 194
Query: 167 GD-PAAQ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD A+Q P + E+ + L +++ G V +Q LA + G+ + + +
Sbjct: 195 GDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQGGVISQEILANLYYSGQMLPLDKK 254
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+AA WY +AA+ A Y GE + + R W+++AA G +AQ +
Sbjct: 255 KAAYWYEQAAKEHNGSAAKMLGAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSM- 313
Query: 274 LFTEGEMM----KAVVYLELATRAGETAA 298
+ E + + KA +L+ A AG+ A
Sbjct: 314 FYQESDTLEDKEKAEFWLKTAALAGDKEA 342
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GD P + A+ +A+ G A + L + G GV ++ +AA W+ +AA G
Sbjct: 64 GDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGVPIDIAKAAYWFEKAANAG 123
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A + Y GEG+P + + W K+A G
Sbjct: 124 NWDAARRLATLYINGEGVPKNVEKGISWYKKAIQSG 159
>gi|19074843|ref|NP_586349.1| similarity to SKT5 PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|19069568|emb|CAD25953.1| similarity to SKT5 PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449328583|gb|AGE94860.1| skt5 protein [Encephalitozoon cuniculi]
Length = 590
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G F G GV +N + A++ F + + + A+ + G Y E E A +YR +
Sbjct: 176 GYCFLKGFGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLS 235
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A + + AQ A + ++A +L ++++ G+ Q LA C +G G +
Sbjct: 236 AKMENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTER 295
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA--DCGHGKAQL 268
NL++A WY RAA G RA +N CY G G R A W K +A D + L
Sbjct: 296 NLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIHAL 355
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAG 294
+HG G+ + + AV Y RAG
Sbjct: 356 GVCYQHGYGVPKDERL--AVRYFSEGVRAG 383
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-E 154
+++ L G ++ GRGV +NL KA + + A ++ A G Y E +D+ +
Sbjct: 203 KDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKMENSYAQNALGNCYEEGKGVDRDLQ 262
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A LY+++A+ G P+ Q N E+A + +A+I G RA++ + C
Sbjct: 263 KAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYKRAAIQGLSRAKHNIGYC 322
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G G ++ A WY +A +++ +CY G G+P R A ++
Sbjct: 323 YQNGLGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYFSEGVRA 382
Query: 262 GHGKA 266
G +A
Sbjct: 383 GFDEA 387
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 19/156 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G G KNL KA+ + A R ++ A+ + +Y +
Sbjct: 428 GYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNH--------------- 472
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
PA+ E ++LL ++ G+ RA L C +G V + + A Y +A GY
Sbjct: 473 ----VPADKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNGY 528
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+A Y+ CY G G + +A + +A+ G
Sbjct: 529 SKAGYSLGRCYESGIGTEVDLDKALYYFYKASSAGE 564
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++HG GV K+ A+ F +G G A++ L Y E + +L ++A
Sbjct: 356 GVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKRA 415
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A + + +AQ P N +AVK ++ + A + L+ G V
Sbjct: 416 AEMNNSSAQNTLGYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPA 475
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + R +R+ + G RAM C+ G + R A + +A G+ KA
Sbjct: 476 DKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNGYSKAGYSL 535
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQL 309
G G+ TE ++ KA+ Y A+ AGE A+ IL L
Sbjct: 536 GRCYESGIGTEVDLDKALYYFYKASSAGEEASLQRLKKILSSL 578
>gi|183600300|ref|ZP_02961793.1| hypothetical protein PROSTU_03860 [Providencia stuartii ATCC 25827]
gi|386743727|ref|YP_006216906.1| hypothetical protein S70_11840 [Providencia stuartii MRSN 2154]
gi|188020091|gb|EDU58131.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
gi|384480420|gb|AFH94215.1| hypothetical protein S70_11840 [Providencia stuartii MRSN 2154]
Length = 263
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G+R+ G GV ++ A + F+K +G+ A G MY + DK A+ Y
Sbjct: 53 GQRYFKGNGVSQDSKVAAEWFIKAGDQGNADAQFQLGTMYVNGFGVRRDYDK---AMLWY 109
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+QAA D RA+ +A+ +G GV +L++AA W+
Sbjct: 110 QQAAKQND-----------------------TRAETNMAMMYAQGLGVAQDLEKAAYWFR 146
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+GG V A ++ YS G G+ L + +A W ++AA KAQ G+ +++EG+
Sbjct: 147 KAAQGGNVIAQFHIGQMYSIGSGVDLDNEKAVFWFRKAAKQRDAKAQDRLGV-MYSEGKG 205
Query: 281 MK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+K + +L A +G + +++ + +QLS + +A + +++
Sbjct: 206 VKKNLQQSYAWLTTAVYSGNKESHRLQSKVAEQLSESELKQAQKLAENY 254
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+L P + A +++ ++ + Q + G AQY L +G GV + + AA W+++A +
Sbjct: 19 LLATPPIKSAPSQQTIEQITQLAQKGDPTAQYLLGQRYFKGNGVSQDSKVAAEWFIKAGD 78
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEM 280
G A + Y G G+ + +A W ++AA +A+ + + GL ++
Sbjct: 79 QGNADAQFQLGTMYVNGFGVRRDYDKAMLWYQQAAKQNDTRAETNMAMMYAQGLGVAQDL 138
Query: 281 MKAVVYLELATRAGETAA 298
KA + A + G A
Sbjct: 139 EKAAYWFRKAAQGGNVIA 156
>gi|50085803|ref|YP_047313.1| signal peptide [Acinetobacter sp. ADP1]
gi|49531779|emb|CAG69491.1| conserved hypothetical protein; putative signal peptide
[Acinetobacter sp. ADP1]
Length = 240
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV +N A + F K A G A G MY E E
Sbjct: 93 GLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEK------------ 140
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N +A + + +A++ G+ A++ L L + GRGV N Q+A +WY +AAE
Sbjct: 141 -------NMPQAFEWIQKAALQGYPPAEFSLGLMYNDGRGVAQNKQQAIKWYTQAAEHQQ 193
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A YN + Y GEG + A+KW++RAA+ G
Sbjct: 194 SNAQYNLGIMYLNGEGTSKNPPLAKKWLQRAANAG 228
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH 191
AA+G + A G+MY L + V D +A+K L A G
Sbjct: 44 AAQGKSTAQYHLGMMY-----------LSGEQGVTKD-------TTQALKWLTLADQNGS 85
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
V A+Y L L G GV N A W+ +AA+ G+ +A Y YS G G+ + QA
Sbjct: 86 VGAKYSLGLMYMTGTGVSQNQSTAFEWFSKAAKFGHAQAQYTVGRMYSEGVGVEKNMPQA 145
Query: 252 RKWMKRAADCGHGKAQLEHGLGLFTEG 278
+W+++AA G+ A+ GL ++ +G
Sbjct: 146 FEWIQKAALQGYPPAEFSLGL-MYNDG 171
>gi|123481611|ref|XP_001323598.1| CAMK family protein kinase [Trichomonas vaginalis G3]
gi|121906466|gb|EAY11375.1| CAMK family protein kinase [Trichomonas vaginalis G3]
Length = 2004
Score = 71.6 bits (174), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDK--KEAAISLYRQ 162
G +++G V KN++ A + + A G A + GLM +++ K KEAA ++Y +
Sbjct: 396 GILYQNGISVEKNIELAANYYRLAAQSGHREAQLQYGLMLQNGYDIQKNIKEAA-NIYSE 454
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G+P A N +EA KL A+ + AQ A+ L G+GV
Sbjct: 455 SAKQGNPGAMNQYALLLKEGIGVDKNIKEAAKLFKNAADKENAEAQNNFAIMLQNGQGVP 514
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N++ AA+++ ++A+ G + A N C G G+ + K+ K++AD G
Sbjct: 515 KNIKMAAKYFEKSAKNGNIEAQSNYGWCLKVGAGVEKDIELSTKYFKQSADGGSAIGHNY 574
Query: 270 HGLGLF 275
+GL L
Sbjct: 575 YGLALL 580
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDK--K 153
REA L++G ++G ++KN+ +A + + + A +G+ AM L+ E +DK K
Sbjct: 425 REAQ--LQYGLMLQNGYDIQKNIKEAANIYSESAKQGNPGAMNQYALLLKEGIGVDKNIK 482
Query: 154 EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
EAA L++ AA + AQ P N + A K +++ G++ AQ
Sbjct: 483 EAA-KLFKNAADKENAEAQNNFAIMLQNGQGVPKNIKMAAKYFEKSAKNGNIEAQSNYGW 541
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
CL G GV+ +++ + +++ ++A+GG L G+G+ S ++A K +A+
Sbjct: 542 CLKVGAGVEKDIELSTKYFKQSADGGSAIGHNYYGLALLLGQGVHKSDKRAAHQFKLSAE 601
Query: 261 CGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAA 298
L +G+ L+ +G +K A +Y++ + G A
Sbjct: 602 MNDEFGLLNYGMALY-DGIGVKQNYTIAAIYIKKSADKGNNQA 643
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGV-DFNLQEAARWYLRAAEGGYVRAMYNTS 235
+EA++ A+ G A YQL C G+GV + +LQ A+++Y +AA+ ++ Y +
Sbjct: 887 DEAIESFKLAADIGIAEAMYQLGRCYEEGKGVKEVDLQLASKYYKKAADLDHIEGCYKYA 946
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
LC G G+P + A + K+ + H ++L +
Sbjct: 947 LCCRNGLGVPKNDADALNYFKKGYEFDHDLSKLNYA 982
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 26/198 (13%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
+G ++G GV++NL+ A++ F + A A + GLM L
Sbjct: 1639 YGLMLRNGFGVKQNLEGAVEYFRRAAKLNHADACYNCGLMI-----------------RL 1681
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A Q N A Y A+ H+ A Y LA+ G GV N AA ++ AA GG
Sbjct: 1682 GFGAKQ--NLSRAAYYYYLAAKQRHIYASYNLAILHSNGWGVSKNESLAAYYFGIAARGG 1739
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EM 280
A N L G G+ + A K+ +R+A G+ Q + L + +EG
Sbjct: 1740 DAAAQANLGLMLKNGIGVEKNIFGAVKYFRRSARQGNATGQNNYAL-ILSEGWPGHDPNP 1798
Query: 281 MKAVVYLELATRAGETAA 298
KA ++ A + G +A
Sbjct: 1799 EKATIFFRFAAKQGNVSA 1816
Score = 46.6 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAA 171
++G GV KN AL+ F KG L+ ++ M E+ K
Sbjct: 950 RNGLGVPKNDADALNYFKKGYEFDHDLSKLNYAEMLNEIGGK------------------ 991
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+N A L + + GH A YQ A+ L GRGV +LQ ++ ++LR A Y
Sbjct: 992 --SNIALAANLFRELAYLGHAEAMYQYAIMLRDGRGVPVDLQRSSHYFLRCATINY 1045
Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 18/167 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G K+G GV KN+ A+ F + A +G+ + L+ E G
Sbjct: 1748 GLMLKNGIGVEKNIFGAVKYFRRSARQGNATGQNNYALILSE-----------------G 1790
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P P N E+A A+ G+V A Y A+ L +G G N ++AA+ ++ G
Sbjct: 1791 WPGHDP-NPEKATIFFRFAAKQGNVSAMYNYAIALLKGVGCKRNPKKAAKILALSSREGD 1849
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
+ + + GE + + +++ AA GH A + G L
Sbjct: 1850 IDSQFKLGYMLYKGERIRKDPIRGLQYLAMAARQGHILAMIMIGRAL 1896
Score = 37.4 bits (85), Expect = 8.7, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLY 160
+ G G +RK+ + L A +G LAM+ G D E ++ +
Sbjct: 1854 FKLGYMLYKGERIRKDPIRGLQYLAMAARQGHILAMIMIGRALKNGDFIGQNIELSLKYF 1913
Query: 161 RQAAVLGDPAA-----QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
+ A++L DP E + + +++ G+V AQ A+ L+ G+ + +++ A
Sbjct: 1914 KAASILDDPVGLLNYGMSQKGGEGAEYVKKSADLGNVEAQCYYAVMLYSGKEIKRDVESA 1973
Query: 216 ARWYLRAAEGGYVRA 230
+ +A+ GY A
Sbjct: 1974 FYYIKLSADQGYSNA 1988
>gi|323450500|gb|EGB06381.1| hypothetical protein AURANDRAFT_54293 [Aureococcus anophagefferens]
Length = 240
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 150 MDKKEAAISLYRQAAVLGDPAAQ---------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
+DKK+A LYR AA G+ AQ EEA + A+ G+ ++ L
Sbjct: 10 LDKKKAE-RLYRAAADRGEATAQCNLGAFLHSDEKFEEAFRYFVLAANQGYTPGEFNLGC 68
Query: 201 CLHRGRGVDFNLQEAARW---------------------------YLRAAEGGYVRAMYN 233
C RG+G + +L +A W Y RA E G V AM N
Sbjct: 69 CYQRGKGTELDLGKARYWFERAAAKGDEDAIDELARLDARKAAKIYRRAVELGDVDAMIN 128
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 293
L Y G G+ L ++A + + AAD GH AQ G L++E + +A Y LA
Sbjct: 129 LGLLYRTGSGVKLDKKKAERLYRAAADRGHAVAQCNQGNLLYSEKKFEEAFRYYALAADQ 188
Query: 294 GETAADHVKNVILQQLSATSRD 315
G T A++ + + T D
Sbjct: 189 GHTKAEYNLGICYRDGEGTEVD 210
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+G +L KA F + AA+G A+ + +D ++AA +YR+A LGD
Sbjct: 70 YQRGKGTELDLGKARYWFERAAAKGDEDAIDELA----RLDARKAA-KIYRRAVELGDVD 124
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
A + ++A +L A+ GH AQ L+ + +EA R
Sbjct: 125 AMINLGLLYRTGSGVKLDKKKAERLYRAAADRGHAVAQCNQGNLLYSEK----KFEEAFR 180
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+Y AA+ G+ +A YN +CY GEG + +AR W +RAA GH KA
Sbjct: 181 YYALAADQGHTKAEYNLGICYRDGEGTEVDLGKARYWFERAAAKGHEKA 229
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQPANA---------EEAV 180
G AM++ GL+Y ++DKK+A LYR AA G AQ EEA
Sbjct: 121 GDVDAMINLGLLYRTGSGVKLDKKKAE-RLYRAAADRGHAVAQCNQGNLLYSEKKFEEAF 179
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
+ A+ GH +A+Y L +C G G + +L +A W+ RAA G+ +A+
Sbjct: 180 RYYALAADQGHTKAEYNLGICYRDGEGTEVDLGKARYWFERAAAKGHEKAI 230
>gi|395764181|ref|ZP_10444850.1| Sel1 domain-containing protein [Janthinobacterium lividum PAMC
25724]
Length = 519
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 18/183 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDP 169
G+GV ++ +A + K A +G A + G +Y + +++A+++ + +AA GD
Sbjct: 73 GQGVAQDFVQAAHWYQKAAEQGYAAAQYNLGWLYAKGQGMAQDSALAMLWFSRAAEQGDA 132
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ P + +A+ +A+ G+ RAQ+ L L G+GV + Q+A
Sbjct: 133 GAQNNLGMMYDNGKGVPQDFVQAINWYRKAAEQGYARAQFNLGLRYDNGQGVRQDRQQAT 192
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
W +AAE GY A +N +L Y G+ L QA W +RAA+ GH +Q GL ++
Sbjct: 193 AWLRKAAEQGYAPAQFNLALRYENGDVLAQDSGQAISWYRRAAEQGHASSQFNLGL-IYD 251
Query: 277 EGE 279
G+
Sbjct: 252 NGQ 254
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 50/215 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G R+ +G+GVR++ +A K A +G A + L Y D AIS YR+A
Sbjct: 175 GLRYDNGQGVRQDRQQATAWLRKAAEQGYAPAQFNLALRYENGDVLAQDSGQAISWYRRA 234
Query: 164 AVLGDPAAQ-------------PANAEEAV------------------------------ 180
A G ++Q P + + A+
Sbjct: 235 AEQGHASSQFNLGLIYDNGQGVPCDKQAALDWYSKAAGQGHAAAQHNLGLHHEHGAQDYT 294
Query: 181 --KLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
++ Y QA+ G AQYQL L G+G + QEA WY +AA+ G+VRA ++ L
Sbjct: 295 QAQVFYRQAAAQGFPAAQYQLGLLHEHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLR 354
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y G+G+P A +W +RAA+ + AQ G+
Sbjct: 355 YEHGQGVPQDLALALEWYRRAAEQDYAPAQYMQGV 389
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G+G+ ++ +AL + AA+G A + G+M + D +AA Y++
Sbjct: 31 GFMYFNGQGIEQSYAQALHWYRLAAAQGLEHAQYNLGVMCQKGQGVAQDFVQAA-HWYQK 89
Query: 163 AAVLGDPAA-----------QPANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AA Q + A+ +L+ +A+ G AQ L + G+GV
Sbjct: 90 AAEQGYAAAQYNLGWLYAKGQGMAQDSALAMLWFSRAAEQGDAGAQNNLGMMYDNGKGVP 149
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY +AAE GY RA +N L Y G+G+ +QA W+++AA+ G+ AQ
Sbjct: 150 QDFVQAINWYRKAAEQGYARAQFNLGLRYDNGQGVRQDRQQATAWLRKAAEQGYAPAQFN 209
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--MDKKEAAISLYRQAAV 165
G + +G+GV + ALD + K A +G A + GL + D +A + YRQAA
Sbjct: 247 GLIYDNGQGVPCDKQAALDWYSKAAGQGHAAAQHNLGLHHEHGAQDYTQAQV-FYRQAAA 305
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G PAAQ P +A+EA+ +A+ GHVRAQ+ L L G+GV +L
Sbjct: 306 QGFPAAQYQLGLLHEHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLRYEHGQGVPQDL 365
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A WY RAAE Y A Y + + +G + A RAA GH AQ GL
Sbjct: 366 ALALEWYRRAAEQDYAPAQYMQGVLHDRDDGPAPDSQLACACYCRAAAQGHSLAQFALGL 425
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQY L + +G+GV + +AA WY +AAE GY A YN Y+ G+G+
Sbjct: 54 AAAQGLEHAQYNLGVMCQKGQGVAQDFVQAAHWYQKAAEQGYAAAQYNLGWLYAKGQGMA 113
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A W RAA+ G AQ G+ ++ G+
Sbjct: 114 QDSALAMLWFSRAAEQGDAGAQNNLGM-MYDNGK 146
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GV ++ +A++ + K A +G A + GL Y D + RQ
Sbjct: 139 GMMYDNGKGVPQDFVQAINWYRKAAEQGYARAQFNLGLRY---DNGQGV----RQ----- 186
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ ++A L +A+ G+ AQ+ LAL G + + +A WY RAAE G+
Sbjct: 187 -------DRQQATAWLRKAAEQGYAPAQFNLALRYENGDVLAQDSGQAISWYRRAAEQGH 239
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ +N L Y G+G+P + A W +
Sbjct: 240 ASSQFNLGLIYDNGQGVPCDKQAALDWYSK 269
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ L G+G++ + +A WY AA G A YN + G+G+
Sbjct: 22 GNANAQHSLGFMYFNGQGIEQSYAQALHWYRLAAAQGLEHAQYNLGVMCQKGQGVAQDFV 81
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNV 304
QA W ++AA+ G+ AQ G L+ +G+ M A+++ A G+ A + +
Sbjct: 82 QAAHWYQKAAEQGYAAAQYNLGW-LYAKGQGMAQDSALAMLWFSRAAEQGDAGAQNNLGM 140
Query: 305 ILQQLSATSRD 315
+ +D
Sbjct: 141 MYDNGKGVPQD 151
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAA--- 164
+HG+G + +A+ + K A +G A D GL Y ++ A++L YR+AA
Sbjct: 320 EHGQGTPVDAQEAIFWYRKAADQGHVRAQFDLGLRYEHGQGVPQDLALALEWYRRAAEQD 379
Query: 165 ---------VLGDPAAQPA-NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
VL D PA +++ A +A+ GH AQ+ L L G+ V +
Sbjct: 380 YAPAQYMQGVLHDRDDGPAPDSQLACACYCRAAAQGHSLAQFALGLRHDNGQDVPQDYAA 439
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
A WY AA G+ RA N L + G+G PL +QA W+
Sbjct: 440 AWDWYALAARQGHARAQMNLGLMAASGQGGPLDLQQAYIWL 480
>gi|153867676|ref|ZP_01997972.1| conserved hypothetical protein [Beggiatoa sp. SS]
gi|152145004|gb|EDN72028.1| conserved hypothetical protein [Beggiatoa sp. SS]
Length = 269
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 26/233 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+GV +L +A+ K A +G A + G++Y + + + + + LG
Sbjct: 38 GVMYRDGKGVHPDLAEAVKWIQKAADQGLAKAQFNLGMLY--LYGQGVSHDMTQVEHWLG 95
Query: 168 DPAAQP-ANAEEAVKLLY-----------------QASIAGHVRAQYQLALCLHRGRGVD 209
A+Q A+ + LLY + + G V AQ LAL ++G GV
Sbjct: 96 KAASQGLVQAQYHLWLLYRDARGTKDFVQLAKWVHKTAENGDVGAQSFLALMYYQGEGVK 155
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +AA WY +AAE G + + YN + Y G+G+ + +QA W ++AAD G +AQ +
Sbjct: 156 QDFTQAAHWYQKAAEQGDMYSQYNIAQMYHQGKGVKKTPKQAANWYRKAADQGLVEAQYQ 215
Query: 270 HGLGLFTEGE-MMKAVVYLE----LATRAGETAADHVKNVILQQLSATSRDRA 317
G G++ +GE + K V+++ A + G +A IL QL DR+
Sbjct: 216 LG-GMYAKGEGVSKDVLFINALFVTAAKQGHESAIVELIHILTQLPLVQIDRS 267
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N AV +A+ H AQ QL + G+GV +L EA +W +AA+ G +A +N
Sbjct: 14 NHITAVSWYRKAADQNHAPAQNQLGVMYRDGKGVHPDLAEAVKWIQKAADQGLAKAQFNL 73
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y +G+G+ Q W+ +AA G +AQ
Sbjct: 74 GMLYLYGQGVSHDMTQVEHWLGKAASQGLVQAQ 106
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 156 AISLYRQAAVLGDPAAQPANAE----------------EAVKLLYQASIAGHVRAQYQLA 199
A+S YR+AA D PA + EAVK + +A+ G +AQ+ L
Sbjct: 18 AVSWYRKAA---DQNHAPAQNQLGVMYRDGKGVHPDLAEAVKWIQKAADQGLAKAQFNLG 74
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ G+GV ++ + W +AA G V+A Y+ L Y G Q KW+ + A
Sbjct: 75 MLYLYGQGVSHDMTQVEHWLGKAASQGLVQAQYHLWLLYRDARGTK-DFVQLAKWVHKTA 133
Query: 260 DCGHGKAQLEHGLGLFTEGEMMK 282
+ G AQ L ++ +GE +K
Sbjct: 134 ENGDVGAQSFLAL-MYYQGEGVK 155
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+GV N A WY +AA+ + A + Y G+G+ +A KW+++AAD G K
Sbjct: 9 QGVYQNHITAVSWYRKAADQNHAPAQNQLGVMYRDGKGVHPDLAEAVKWIQKAADQGLAK 68
Query: 266 AQLEHG-LGLFTEG 278
AQ G L L+ +G
Sbjct: 69 AQFNLGMLYLYGQG 82
>gi|158341666|ref|NP_808794.2| protein sel-1 homolog 1 precursor [Rattus norvegicus]
gi|149025308|gb|EDL81675.1| Sel1 (suppressor of lin-12) 1 homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 793
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 386 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 445
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 446 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 505
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 506 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 565
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 566 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 602
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 261 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 320
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 321 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 380
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 381 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 440
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 441 ADMGNPVGQ--SGLGM 454
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 453 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 500
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 501 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 534
>gi|338737655|ref|YP_004674617.1| Sel1 domain-containing protein [Hyphomicrobium sp. MC1]
gi|337758218|emb|CCB64043.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium sp.
MC1]
Length = 907
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+R AA GD +AQ N EA K +++ G AQY+L RG
Sbjct: 697 FRLAAANGDSSAQFEVGARFAEGEGVSQNFAEAAKWYQRSAEQGFALAQYRLGTLYERGL 756
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
G+ + ++A+ WYLRAAE G ++AM+N ++ + + A +W + AA G +
Sbjct: 757 GLKADRKQASTWYLRAAEQGNIKAMHNLAVLSANQSDRAPDYTTAAQWFEEAAKRGLPDS 816
Query: 267 QL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
Q E+GLG+ ++ A ++L LA + G+ A ++++ +L+A A +
Sbjct: 817 QFNLAVLYENGLGVTR--DLRTAFMWLSLAAQGGDADAVRRRDILRGKLTAQDITVARKM 874
Query: 321 VDSWRAMPS 329
+D+WR P+
Sbjct: 875 IDAWRMTPT 883
>gi|397676978|ref|YP_006518516.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397667|gb|AFN56994.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 374
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ+ L RG+GV N + A WY +AA+ G+V+A N Y +G G+P + +
Sbjct: 75 GHAEAQFYLGALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQ 134
Query: 250 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
A W++RAA G AQ G GL T E A ++ + A G A++ V+
Sbjct: 135 AALTWLQRAAGQGDKVAQTNLGDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVM 194
Query: 306 LQQLSATSRDRA 317
Q ++D A
Sbjct: 195 YSQGHGVTQDMA 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G ++ G+GV +N A + K A +G A + G MY +AA++ ++A
Sbjct: 84 GALYERGKGVARNYKTAFSWYQKAADQGFVKAENNVGSMYQYGVGVPQNFQAALTWLQRA 143
Query: 164 AVLGDPAAQP------------ANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ A + + YQ A+ G+ A+Y L + +G GV
Sbjct: 144 AGQGDKVAQTNLGDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGHGVTQ 203
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
++ AA WY +AA+ + A YN + Y G+G+ + A W ++AAD G KAQL
Sbjct: 204 DMATAATWYQKAADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLN 262
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + A + K AA+G LA + G+MY + A + Y++A
Sbjct: 156 GDMYYQGLGTAQEYKTAAIWYQKAAAQGYALAEYNLGVMYSQGHGVTQDMATAATWYQKA 215
Query: 164 AVLGDPAA-----------QPANAEEAVKLLY--QASIAGHVRAQYQLA-LCLHRGRGVD 209
A PAA Q ++ V L + +A+ G V+AQ LA L H+ +G
Sbjct: 216 ADQKFPAAEYNIAYLYEKGQGVVQDQKVALAWYQKAADQGFVKAQLNLASLLYHQAKGQA 275
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N +EAA WY +AA G V A++ GEG + A W AA G
Sbjct: 276 QNYKEAALWYQKAAAQGDVVALFMLGKMAHLGEGAARNDVDAYMWFSLAAGLG 328
>gi|419913974|ref|ZP_14432382.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
gi|388387826|gb|EIL49431.1| TPR repeat-containing protein, partial [Escherichia coli KD1]
Length = 585
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 267 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 326
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 327 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 386
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 387 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 446
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 447 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 490
>gi|60360536|dbj|BAD90512.1| mKIAA4137 protein [Mus musculus]
Length = 832
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 425 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 484
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 485 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 544
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 545 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 604
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 605 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 641
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 300 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 359
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 360 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 419
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 420 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 479
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 480 ADMGNPVGQ--SGLGM 493
>gi|294661318|ref|YP_003573194.1| hypothetical protein Aasi_1811 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336469|gb|ACP21066.1| hypothetical protein Aasi_1811 [Candidatus Amoebophilus asiaticus
5a2]
Length = 208
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L + G+GV +LQ+A W+ +AAE GYV A + + Y GEG+P + +QA +
Sbjct: 55 AQVNLGVMYEEGKGVRKDLQQAIGWFRKAAEQGYVNAQNSLGVMYRSGEGIPKNVQQAIE 114
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQ 308
W ++AA G+ KAQ G ++ GE + +A ++++ A GE AA V+ +
Sbjct: 115 WFRKAAKQGNSKAQFSLGY-MYYRGEEVREDLQQAAIWVKKAAEQGEPAAQFNLGVMYTR 173
Query: 309 LSATSRD 315
RD
Sbjct: 174 GKGVRRD 180
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
R A + G ++ G+GVRK+L +A+ F K A +G A G+MY
Sbjct: 51 RNADAQVNLGVMYEEGKGVRKDLQQAIGWFRKAAEQGYVNAQNSLGVMY----------- 99
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
R + P N ++A++ +A+ G+ +AQ+ L +RG V +LQ+AA W
Sbjct: 100 --RSGEGI------PKNVQQAIEWFRKAAKQGNSKAQFSLGYMYYRGEEVREDLQQAAIW 151
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+AAE G A +N + Y+ G+G+ +QA KW + A
Sbjct: 152 VKKAAEQGEPAAQFNLGVMYTRGKGVRRDLQQAVKWYIKCA 192
>gi|424741229|ref|ZP_18169590.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
gi|422945162|gb|EKU40133.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
Length = 230
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K+ +A D F K AA+ A + G++Y D+ E Y +A
Sbjct: 83 GMMYYTGTGVEKDAKRAFDYFTKAAAKDHVKAQYNLGVLY---DRGEGTAQDYGKA---- 135
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 136 ------------FEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSNEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 184 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY Y V D
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSMGAKYSLGMMY------------YTGTGVEKD------ 95
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
A+ A +A+ HV+AQY L + RG G + +A W+ RAA+ GY A YN
Sbjct: 96 -AKRAFDYFTKAAAKDHVKAQYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S+ QA KW +AA+ H ++ ++ L ++ GE L+LA +
Sbjct: 155 AHLYKKGHGVSQSNEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKW 210
Query: 294 GETAAD 299
+ AAD
Sbjct: 211 FQQAAD 216
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 190 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY L + L G +GV N ++A +W A + G + A Y+ + Y G G+
Sbjct: 37 GQSVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNGSMGAKYSLGMMYYTGTGVEKDA 96
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++A + +AA H KAQ G+ L+ GE
Sbjct: 97 KRAFDYFTKAAAKDHVKAQYNLGV-LYDRGE 126
>gi|212710155|ref|ZP_03318283.1| hypothetical protein PROVALCAL_01209 [Providencia alcalifaciens DSM
30120]
gi|422019093|ref|ZP_16365643.1| hypothetical protein OO9_10346 [Providencia alcalifaciens Dmel2]
gi|212687154|gb|EEB46682.1| hypothetical protein PROVALCAL_01209 [Providencia alcalifaciens DSM
30120]
gi|414103635|gb|EKT65209.1| hypothetical protein OO9_10346 [Providencia alcalifaciens Dmel2]
Length = 265
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G+R+ G+GV ++ A + F+K +G++ A G MY + DK A+ Y
Sbjct: 54 GERYFKGQGVSQDSKVAAEWFIKAGDQGNSDAQFRLGTMYVNGFGVRRDYDK---AMLWY 110
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+AA GD RA+ +A +G GV +L++AA W+
Sbjct: 111 EEAAKNGD-----------------------TRAETNMATMYAQGLGVKQDLEKAAYWFR 147
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+ G V A + YS G G+ L + +A W ++AA +Q G+ +++EG+
Sbjct: 148 KAAQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWFRKAAKQRDANSQDRLGV-MYSEGKG 206
Query: 281 MK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+K A +L A +G + ++ I +QLSA +A + D++
Sbjct: 207 VKKNLQQAYAWLSTAVYSGNKESQRLQKKIAEQLSAEELKQAQKLADNY 255
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G GVR++ DKA+ + + A G T A + MY A
Sbjct: 87 FRLGTMYVNGFGVRRDYDKAMLWYEEAAKNGDTRAETNMATMY---------------AQ 131
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG + E+A +A+ +G+V AQ+++ G GV + ++A W+ +AA+
Sbjct: 132 GLG----VKQDLEKAAYWFRKAAQSGNVIAQFKIGQMYSIGSGVALDNEKAVFWFRKAAK 187
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + YS G+G+ + +QA W+ A G+ ++Q
Sbjct: 188 QRDANSQDRLGVMYSEGKGVKKNLQQAYAWLSTAVYSGNKESQ 230
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 165 VLGDPAAQPANAEE--AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
+L PA +P A E ++ + Q + G +Q+ L +G+GV + + AA W+++A
Sbjct: 19 LLATPA-KPTTASEQTTIEQITQLAEKGDPASQFLLGERYFKGQGVSQDSKVAAEWFIKA 77
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEG 278
+ G A + Y G G+ + +A W + AA G +A+ + GL +
Sbjct: 78 GDQGNSDAQFRLGTMYVNGFGVRRDYDKAMLWYEEAAKNGDTRAETNMATMYAQGLGVKQ 137
Query: 279 EMMKAVVYLELATRAGETAA 298
++ KA + A ++G A
Sbjct: 138 DLEKAAYWFRKAAQSGNVIA 157
>gi|392390039|ref|YP_006426642.1| Sel1 repeat protein [Ornithobacterium rhinotracheale DSM 15997]
gi|390521117|gb|AFL96848.1| Sel1 repeat protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 257
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
G ++ KA + K A +G A + G+MY + GD Q
Sbjct: 77 EGTEQDRQKAFEWVQKIAEQGDASAQFNLGVMY-----------------IKGDGTQQ-- 117
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ ++A + L +A+ G AQY L L ++G G + ++A WY +AAE G+ +A +N
Sbjct: 118 DYQKAKEWLQKAAEQGDADAQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKAQFNL 177
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
Y GEG+ + +A +W ++AA+ G KAQ G
Sbjct: 178 GYMYDNGEGVKQDYHKAFEWYQKAAEQGFAKAQYNLG 214
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ L+ G + + Q+A W + AE G A +N + Y G+G ++
Sbjct: 61 GDADAQHNLSEMNDNEEGTEQDRQKAFEWVQKIAEQGDASAQFNLGVMYIKGDGTQQDYQ 120
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
+A++W+++AA+ G AQ GL G T+ + KA+ + + A G A
Sbjct: 121 KAKEWLQKAAEQGDADAQYNLGLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKA 173
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G +++ +KA++ + K A +G A + G MY D E Y +A
Sbjct: 142 GLMYNKGTGTQQDYEKAIEWYQKAAEQGHAKAQFNLGYMY---DNGEGVKQDYHKAFEWY 198
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
AA+ G +AQY L + G+GV + Q+A ++ +A + G
Sbjct: 199 QKAAEQ----------------GFAKAQYNLGSMYYNGKGVRQDYQKAKEYFGKACDNG 241
>gi|451982335|ref|ZP_21930653.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
gi|451760500|emb|CCQ91937.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
Length = 194
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GD A + ++ +EA +A+ AGHV AQ QL + G+GV + A W +AAE G
Sbjct: 40 GDAAYEQSDYKEAFAWYRKAAEAGHVEAQTQLGMMYATGQGVRQDYDAALAWTRKAAESG 99
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+VRA N + Y G G+P +++ KW+ A+ G KAQ + GL
Sbjct: 100 HVRAQTNLGILYMTGFGIPRDFKESVKWLTMGAEGGDPKAQTQLGL 145
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQPA-----NAEEAVKLLYQASIA--------GHVR 193
Y + D KEA + YR+AA G AQ + V+ Y A++A GHVR
Sbjct: 44 YEQSDYKEA-FAWYRKAAEAGHVEAQTQLGMMYATGQGVRQDYDAALAWTRKAAESGHVR 102
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L + G G+ + +E+ +W AEGG +A L G G+ +A
Sbjct: 103 AQTNLGILYMTGFGIPRDFKESVKWLTMGAEGGDPKAQTQLGLMRETGIGIARDPIRALH 162
Query: 254 WMKRAA 259
W ++AA
Sbjct: 163 WYRKAA 168
>gi|62510950|sp|Q80Z70.2|SE1L1_RAT RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
Length = 794
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 567 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
>gi|32169828|emb|CAD99199.1| hypothetical protein [Mucor circinelloides]
Length = 202
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 132 AARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAAQP----------ANAE 177
A +G+ A G Y + K A YRQ+A G P AQ +
Sbjct: 6 AEQGNAFAQNSLGYCYEDGIGVPQDKTVAADWYRQSAEQGYPWAQCNLGYCHQNGIGAEK 65
Query: 178 EAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ VK Y QA+ GH RAQ+ L C H G GV NLQ A WY ++A G + A ++
Sbjct: 66 DTVKGAYWYGQAARQGHARAQHNLGFCYHNGIGVTRNLQMAVAWYKKSANQGNIFAYHSL 125
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
C+ G G+ ++ R++ W R+A+ H AQL GL
Sbjct: 126 GYCFQNGLGVEVNLRESCYWYFRSAEHNHAPAQLSLGL 163
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G+ AQ L C G GV + AA WY ++AE GY A N C+ G G
Sbjct: 5 AAEQGNAFAQNSLGYCYEDGIGVPQDKTVAADWYRQSAEQGYPWAQCNLGYCHQNGIGAE 64
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHV 301
+ W +AA GH +AQ G G+ + AV + + + G A H
Sbjct: 65 KDTVKGAYWYGQAARQGHARAQHNLGFCYHNGIGVTRNLQMAVAWYKKSANQGNIFAYHS 124
Query: 302 KNVILQ 307
Q
Sbjct: 125 LGYCFQ 130
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 19/131 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV +NL A+ + K A +G+ A G + + + +
Sbjct: 90 GFCYHNGIGVTRNLQMAVAWYKKSANQGNIFAYHSLGYCF------QNGLGV-------- 135
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N E+ ++++ H AQ L LC G GV N +EA +W+ +A G
Sbjct: 136 -----EVNLRESCYWYFRSAEHNHAPAQLSLGLCFRNGMGVQKNEEEACKWFRLSALQGN 190
Query: 228 VRAMYNTSLCY 238
A + CY
Sbjct: 191 PLAQNSLGFCY 201
>gi|338720030|ref|XP_001494914.3| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1 isoform 1
[Equus caballus]
Length = 794
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 387 GXGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 447 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 506
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 507 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 566
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+G+ AV+ YL LA + E A + IL Q AT
Sbjct: 567 KDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 603
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 262 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 321
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 322 ANHVASDISLTGGSVVQRIRLPDEVENPGVNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 381
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH G GV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 382 LHLHGGXGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 441
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 442 ADMGNPVGQ--SGLGM 455
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 454 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 501
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 502 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
>gi|260753434|ref|YP_003226327.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552797|gb|ACV75743.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 334
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + +G + DK++D + + A +G+ A ++ GLM+ D K
Sbjct: 107 DADAALALGNMYYNGDSIAP--DKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKAK 164
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y+QAA G+P A+ P + +A + +A+ G+ A+ L L
Sbjct: 165 ALYWYQQAADKGNPQAELILGNMYYNGEAVPLDKTKAFEWYQKAANQGNAAAELNLGLMY 224
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV + ++ WY +AAE G +A Y+ Y G+G+ + +A W ++AA+
Sbjct: 225 AHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAAN-- 282
Query: 263 HGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAGETAADH 300
HG AQ E LG+ F GE + A +L+ A G A +
Sbjct: 283 HGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 326
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 23/242 (9%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KAL + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKALTLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAAQPA-----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
GD A A +++V L QA+ G+ +AQ L L RG V + +
Sbjct: 105 HGDADAALALGNMYYNGDSIAPDKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKAK 164
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A WY +AA+ G +A Y GE +PL +A +W ++AA+ G+ A+L GL +
Sbjct: 165 ALYWYQQAADKGNPQAELILGNMYYNGEAVPLDKTKAFEWYQKAANQGNAAAELNLGL-M 223
Query: 275 FTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
+ G+ + K++ + + A G+ A++ + + D+A + SW +
Sbjct: 224 YAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMYYNGDGVAVDKAKAL--SWYQQAA 281
Query: 330 LH 331
H
Sbjct: 282 NH 283
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
A L G F G V + KAL + + A +G+ A + G MY+ + K
Sbjct: 141 NAQAQLNLGLMFSRGDAVSLDKAKALYWYQQAADKGNPQAELILGNMYYNGEAVPLDKTK 200
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A Y++AA G+ AA+ P + +++ +A+ G +A+Y L
Sbjct: 201 AFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKAAEQGDAQAEYSLGNMY 260
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ G GV + +A WY +AA G +A + + GEG+ + A W+K+AA+ G
Sbjct: 261 YNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTVDKNNAAYWLKQAANHG 320
Query: 263 HGKAQLE 269
+ A+ +
Sbjct: 321 NDTAKYQ 327
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G V + KA + + K A +G+ A ++ GLMY D K ++S Y++A
Sbjct: 185 GNMYYNGEAVPLDKTKAFEWYQKAANQGNAAAELNLGLMYAHGDGVPLDKNKSLSWYQKA 244
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD A+ + +A+ QA+ G +A+ L + + G GV
Sbjct: 245 AEQGDAQAEYSLGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMFYNGEGVTV 304
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ AA W +AA G A Y L ++
Sbjct: 305 DKNNAAYWLKQAANHGNDTAKYQLKLWFN 333
>gi|323453624|gb|EGB09495.1| hypothetical protein AURANDRAFT_23917 [Aureococcus anophagefferens]
Length = 280
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 25/238 (10%)
Query: 100 EAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKK 153
EA+ L G ++ GR G+ K+ KA + + G AMV G M+ E +DKK
Sbjct: 15 EAISFL--GGAYREGRLGLVKSEKKAAKIWKRAVELGDVDAMVFIGEMHEEGSGVKLDKK 72
Query: 154 EAAISLYRQAAVLGDPAAQPANA---------EEAVKLLYQASIAGHVRAQYQLALCLHR 204
+A + LYR AA G AQ A EEA + A+ G+ + L +C
Sbjct: 73 KA-MKLYRAAADRGSAVAQTNLAILLCHEKKFEEAFRYFALAADRGYTPGEINLGICYRN 131
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAM-------YNTSLCYSFGEGLPLSHRQARKWMKR 257
G+G + +L +A W+ R A G+ +A+ + Y G G+ L ++A + +
Sbjct: 132 GQGTEVDLGKARYWFERGAAKGHEKAIEILARPDWTIPRLYVTGSGVKLDKKKAMQLFRT 191
Query: 258 AADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
AAD G AQ G+ L++E +A Y LA G T +++ + + T D
Sbjct: 192 AADLGSAVAQTNLGVLLYSEKRFEEAFRYYALAANQGFTPSENNLGICYMDGAGTEVD 249
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 27/165 (16%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
R V + +A+ SFL GA R L +V + +KK A I +++A LGD A
Sbjct: 7 RHVENEVPEAI-SFLGGAYREGRLGLVKS-------EKKAAKI--WKRAVELGDVDAMVF 56
Query: 175 NAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
E +A+KL A+ G AQ LA+ L + +EA R++
Sbjct: 57 IGEMHEEGSGVKLDKKKAMKLYRAAADRGSAVAQTNLAILLCHEK----KFEEAFRYFAL 112
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
AA+ GY N +CY G+G + +AR W +R A GH KA
Sbjct: 113 AADRGYTPGEINLGICYRNGQGTEVDLGKARYWFERGAAKGHEKA 157
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G+G +L KA F +GAA+G A+ W + + LY V G +
Sbjct: 129 YRNGQGTEVDLGKARYWFERGAAKGHEKAIEILARPDWTIPR------LY----VTG--S 176
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ ++A++L A+ G AQ L + L+ + +EA R+Y AA G+ +
Sbjct: 177 GVKLDKKKAMQLFRTAADLGSAVAQTNLGVLLYSEK----RFEEAFRYYALAANQGFTPS 232
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N +CY G G + +AR W++RAA G
Sbjct: 233 ENNLGICYMDGAGTEVDLGKARYWLERAAAKGE 265
>gi|397677034|ref|YP_006518572.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397723|gb|AFN57050.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 315
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EA 155
+A LL G + G+GV KN KA+ K A + A G +Y D E
Sbjct: 126 DAQTLL--GAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEK 183
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
AIS Y++AA AQ P N E++ +A++ G + Q+ L
Sbjct: 184 AISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLAC 243
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV N +EA W+ +AA+ G ++A L Y+ GEG+P S +A W+K+AA G
Sbjct: 244 LKGEGVAKNPREAVSWFQKAADQGNLQATTRLGLAYASGEGVPASKEKAVFWLKKAAGQG 303
Query: 263 HGKAQ 267
AQ
Sbjct: 304 EPNAQ 308
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKK 153
+A LL G ++ G G+ KN +KA+ + K A +G+ A G Y + D+K
Sbjct: 90 DAETLL--GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQK 147
Query: 154 ------EAAISLYRQAAVL-------GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+AA + QA GDPA + N E+A+ +A+ V AQ L +
Sbjct: 148 AIFWLQKAADQAFPQAQNFLGEVYETGDPAVR--NIEKAISWYQKAAEGNSVTAQAHLGM 205
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
H G + N +++ W+ +AA G + + L GEG+ + R+A W ++AAD
Sbjct: 206 AYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLACLKGEGVAKNPREAVSWFQKAAD 265
Query: 261 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHV 301
G+ +A GL + GE + KAV +L+ A GE A +
Sbjct: 266 QGNLQATTRLGLA-YASGEGVPASKEKAVFWLKKAAGQGEPNAQRI 310
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + + + L +A+ GH A+ L +G G+ N ++A WY +AA+ G + A
Sbjct: 70 PHDYAKGIFWLQKAADQGHSDAETLLGNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQT 129
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y G+G+P + ++A W+++AAD +AQ
Sbjct: 130 LLGAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQ 164
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ G+ A+ +++ RG+ + + + W +AA+ G+ A Y G
Sbjct: 44 LQKAADQGNADAEAKVSFGYFRGKTLPHDYAKGIFWLQKAADQGHSDAETLLGNAYQQGV 103
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 298
GLP + +A W ++AAD G+ AQ G +G KA+ +L+ +A + A
Sbjct: 104 GLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQ---KAADQAF 160
Query: 299 DHVKNVI 305
+N +
Sbjct: 161 PQAQNFL 167
>gi|354594378|ref|ZP_09012417.1| hypothetical protein CIN_11130 [Commensalibacter intestini A911]
gi|353672054|gb|EHD13754.1| hypothetical protein CIN_11130 [Commensalibacter intestini A911]
Length = 213
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L+ G + G+GV + KA + F K A +G+ A + G MY+ Y +
Sbjct: 53 LKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGSMYY-----------YGKGV 101
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
P + ++A++ +A+ G+V A QL + G+GV + Q+AA ++ +AA
Sbjct: 102 --------PQDDQKAIEYFNKAADQGNVSALTQLGVIYAEGQGVSQDYQKAAEYWDKAAN 153
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
GY A YN Y +G G P ++ ++ +AAD G AQ
Sbjct: 154 QGYEAAQYNLGRMYYYGRGFPQDSQKTIEYFNKAADQGDVIAQ 196
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+V AQ +L + G+GV + Q+AA ++ +AA G A YN Y +G+G+P +
Sbjct: 47 GNVNAQLKLGMTYVLGQGVSADYQKAAEYFNKAANQGNAFAQYNLGSMYYYGKGVPQDDQ 106
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 300
+A ++ +AAD G+ A + G+ ++ EG + KA Y + A G AA +
Sbjct: 107 KAIEYFNKAADQGNVSALTQLGV-IYAEGQGVSQDYQKAAEYWDKAANQGYEAAQY 161
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
VLG + A+ ++A + +A+ G+ AQY L + G+GV + Q+A ++ +AA+
Sbjct: 60 VLGQGVS--ADYQKAAEYFNKAANQGNAFAQYNLGSMYYYGKGVPQDDQKAIEYFNKAAD 117
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-LGLFTEG---EM 280
G V A+ + Y+ G+G+ +++A ++ +AA+ G+ AQ G + + G +
Sbjct: 118 QGNVSALTQLGVIYAEGQGVSQDYQKAAEYWDKAANQGYEAAQYNLGRMYYYGRGFPQDS 177
Query: 281 MKAVVYLELATRAGETAA 298
K + Y A G+ A
Sbjct: 178 QKTIEYFNKAADQGDVIA 195
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+AA K+ N A G + +G+GV ++ KA++ F K A +G+ A+
Sbjct: 71 KAAEYFNKAANQG-----NAFAQYNLGSMYYYGKGVPQDDQKAIEYFNKAADQGNVSALT 125
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
G++Y E + Y++AA D AA G+ AQY L
Sbjct: 126 QLGVIYAE---GQGVSQDYQKAAEYWDKAANQ----------------GYEAAQYNLGRM 166
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
+ GRG + Q+ ++ +AA+ G V A N Y L H
Sbjct: 167 YYYGRGFPQDSQKTIEYFNKAADQGDVIAQQNLKKIYDQDRDLSQKH 213
>gi|303391317|ref|XP_003073888.1| Sel1 repeat-containing protein [Encephalitozoon intestinalis ATCC
50506]
gi|303303037|gb|ADM12528.1| Sel1 repeat-containing protein [Encephalitozoon intestinalis ATCC
50506]
Length = 588
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G F G GV +N + A++ F + + + A+ + G Y E + A +YR +
Sbjct: 174 GYCFLKGFGVERNEEIAVELFRYASEKKDSTALYNIGFCYEEGKGVVRNLVKAFEMYRLS 233
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A + + AQ A + +A + ++++ G+ Q LA C +G G+
Sbjct: 234 AKMENSYAQNALGNCYEEGKGVNKDLHKAFEFYKKSALQGYPSGQCNLAFCYQKGIGIKK 293
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
+LQ+A WY RAA G RA +N CY G G P +A W K +A + +
Sbjct: 294 DLQKAFEWYKRAAAQGLSRAKHNIGYCYQNGLGTPPCMSKAVHWYKESASENNKYSIHAL 353
Query: 268 ---LEHGLGL----------FTEGEMM---KAVVYLELATRAG 294
+HG G+ F EG M +A++ L L R+G
Sbjct: 354 GVCYQHGYGVPKDERLAVRYFGEGAKMGFDEAIISLALCYRSG 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------------WEMDKKE 154
G ++ G+GV K+L KA + + K A +G + Y +E K+
Sbjct: 246 GNCYEEGKGVNKDLHKAFEFYKKSALQGYPSGQCNLAFCYQKGIGIKKDLQKAFEWYKRA 305
Query: 155 AAISLYRQAAVLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AA L R +G + P +AV +++ + + + L +C G GV
Sbjct: 306 AAQGLSRAKHNIGYCYQNGLGTPPCMSKAVHWYKESASENNKYSIHALGVCYQHGYGVPK 365
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + A R++ A+ G+ A+ + +LCY G G+ +S ++ +KRAA + AQ +
Sbjct: 366 DERLAVRYFGEGAKMGFDEAIISLALCYRSGTGVRVSPEKSFGLIKRAAKMNNSSAQ--N 423
Query: 271 GLGLFTE 277
LG + E
Sbjct: 424 TLGYYYE 430
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 80/208 (38%), Gaps = 53/208 (25%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++HG GV K+ A+ F +GA G A++ L Y E + L ++A
Sbjct: 354 GVCYQHGYGVPKDERLAVRYFGEGAKMGFDEAIISLALCYRSGTGVRVSPEKSFGLIKRA 413
Query: 164 AVLGDPAAQ-------------PANAEEAVK----------------------------- 181
A + + +AQ P N +EA+K
Sbjct: 414 AKMNNSSAQNTLGYYYEEGYGTPKNIKEAIKWYGMSAKQDNSWALFNLSNLYFNRSRSST 473
Query: 182 -------LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
LL ++ G+ +A L +G GV+ N A Y +A +GGY++A YN
Sbjct: 474 DKEVGMRLLIKSRDLGNPKAMDTLGYYFEKGIGVEKNPMLAFEHYNQALQGGYLKAGYNL 533
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCG 262
CY G G + +A + +A+ G
Sbjct: 534 GRCYESGIGTEIDLDKALYYFYKASSAG 561
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-------MDK-----KEAA-- 156
++ G G++K+L KA + + + AA+G + A + G Y M K KE+A
Sbjct: 285 YQKGIGIKKDLQKAFEWYKRAAAQGLSRAKHNIGYCYQNGLGTPPCMSKAVHWYKESASE 344
Query: 157 ---ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
S++ P + AV+ + + G A LALC G GV + +
Sbjct: 345 NNKYSIHALGVCYQHGYGVPKDERLAVRYFGEGAKMGFDEAIISLALCYRSGTGVRVSPE 404
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
++ RAA+ A Y G G P + ++A KW +A
Sbjct: 405 KSFGLIKRAAKMNNSSAQNTLGYYYEEGYGTPKNIKEAIKWYGMSA 450
>gi|381181654|ref|ZP_09890487.1| Sel1 domain protein repeat-containing protein [Treponema
saccharophilum DSM 2985]
gi|380766440|gb|EIC00446.1| Sel1 domain protein repeat-containing protein [Treponema
saccharophilum DSM 2985]
Length = 260
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
+ ++ + A F++ A +G A G MY + G AQ N
Sbjct: 78 IEQDEETAAKLFMESAEKGFAPAQFCVGSMYDD-----------------GTGTAQDKN- 119
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+A+K A+ +G+ RAQY LA+ G GV N+ EA +W+ ++AE G V A YN +
Sbjct: 120 -KALKWYRTAAESGYERAQYNLAIMYDTGDGVQKNVAEAIKWFRKSAEQGNVNAQYNMAN 178
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
Y G+G+P +A KW + AA+ G AQ G ++ +GE + A +
Sbjct: 179 YYDTGDGVPQDKVEAIKWYRMAAEQGFAPAQRNLGC-MYHDGEGVPADI 226
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G G ++ +KAL + A G A + +MY D + AI +R++
Sbjct: 105 GSMYDDGTGTAQDKNKALKWYRTAAESGYERAQYNLAIMYDTGDGVQKNVAEAIKWFRKS 164
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ P + EA+K A+ G AQ L H G GV
Sbjct: 165 AEQGNVNAQYNMANYYDTGDGVPQDKVEAIKWYRMAAEQGFAPAQRNLGCMYHDGEGVPA 224
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+++E+ +W+L AAE G A + Y GE
Sbjct: 225 DIEESVKWFLMAAEQGDYNAQFALYNMYQAGE 256
>gi|406876717|gb|EKD26186.1| hypothetical protein ACD_79C01317G0003 [uncultured bacterium]
Length = 282
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTL---AMVDAGLMYWEMDKK--EAAISLYRQ 162
G ++ G VRKN K+ + F KG S+ + DA Y E KK + A Y
Sbjct: 25 GYYYREGIHVRKNHRKSFEYFKKGIELNSSYLIWCLADA-YAYGEGTKKNLKNAFKYYLL 83
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG+P A N ++A+K A+ + A + L LC G GV
Sbjct: 84 AAKLGEPEAITTLGVCYFYGKGIKKNVKKAIKYYRLATKGKDICAYFNLGLCYEWGDGVK 143
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
N ++A ++L+AA G+ R++Y CY G+G+ ++++A KW K++A
Sbjct: 144 KNNKKAFEFFLKAAHLGHSRSLYKVGKCYVEGKGVTKNYKEALKWFKKSA 193
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEA--AISLYRQAAVL 166
+ +G G +KNL A +L A G A+ G+ Y+ + KK AI YR A
Sbjct: 64 YAYGEGTKKNLKNAFKYYLLAAKLGEPEAITTLGVCYFYGKGIKKNVKKAIKYYRLATKG 123
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
D A N ++A + +A+ GH R+ Y++ C G+GV N +
Sbjct: 124 KDICAYFNLGLCYEWGDGVKKNNKKAFEFFLKAAHLGHSRSLYKVGKCYVEGKGVTKNYK 183
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
EA +W+ ++A A+ +C+ G G+ +++ ++ K+A G A GL
Sbjct: 184 EALKWFKKSALEKDPEALSYLGICFHNGWGVKKDFKKSIEYCKKALSLGDDIANYNLGL- 242
Query: 274 LFTEGEMMKAVV 285
+ +GE +K +
Sbjct: 243 CYLDGEGVKKNI 254
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G GV+KN KA + FLK A G + ++ G Y E
Sbjct: 139 GDGVKKNNKKAFEFFLKAAHLGHSRSLYKVGKCYVE-------------------GKGVT 179
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N +EA+K ++++ A L +C H G GV + +++ + +A G A YN
Sbjct: 180 KNYKEALKWFKKSALEKDPEALSYLGICFHNGWGVKKDFKKSIEYCKKALSLGDDIANYN 239
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCG 262
LCY GEG+ + +A+K+ +A G
Sbjct: 240 LGLCYLDGEGVKKNINKAKKYFIKAKKMG 268
>gi|84875513|ref|NP_001034178.1| protein sel-1 homolog 1 isoform a precursor [Mus musculus]
gi|13878771|sp|Q9Z2G6.2|SE1L1_MOUSE RecName: Full=Protein sel-1 homolog 1; AltName: Full=Suppressor of
lin-12-like protein 1; Short=Sel-1L; Flags: Precursor
gi|12836653|dbj|BAB23750.1| unnamed protein product [Mus musculus]
Length = 790
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 442
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 443 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 502
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 503 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 562
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 563 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 599
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 258 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 317
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 318 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 377
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 378 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 437
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 438 ADMGNPVGQ--SGLGM 451
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 450 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 497
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 498 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 531
>gi|237748064|ref|ZP_04578544.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379426|gb|EEO29517.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 1181
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV KN A + + K A GS +GL Y LG+
Sbjct: 811 LQKGKGVEKNEKLACEIYEKTAKEGSPYGQFRSGLCY---------------QTGLGN-- 853
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P N +AV L QA+ Q LA C G+GV NL A +WY AAE G V +
Sbjct: 854 -RPKNPAKAVSLFEQAARQNLPDGQIALAYCYETGQGVAQNLALAFKWYKMAAEKGDVGS 912
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVY 286
M T GEG +QA W +AA+ G +A+++ G G +M KAV
Sbjct: 913 MITTGKMLDKGEGTARDSKQAFYWFSKAAEKGSPEAEVQLGQLYYAGRGISADMKKAVSL 972
Query: 287 LELATRAGETAADH 300
+ + R G A +
Sbjct: 973 FDHSARQGNALAQY 986
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G G++KN ++A+ F K A +G+ A G M++ +D +A I L +Q A G+
Sbjct: 344 GTGMKKNPEEAVRWFEKAAKQGNIDAQSALGYMHYFGVHVPVDYAKA-IPLLKQGADKGN 402
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AQ A N ++A +L +A+ AQ+ L L G G N+ E
Sbjct: 403 SQAQTAMGFAYASGTGIAKNEQKAFELFEKAARNNVRSAQFYLGEMLENGIGTQRNVPEG 462
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
W ++A+ GY +A + + G+ + +ARKWM+ AA H +AQ G+ F
Sbjct: 463 LAWIEKSAKAGYDQAQFTMGINALRGKDKMQNIDEARKWMRLAAKQNHAEAQYMLGMSYF 522
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E V + +A+ GHV A + + + G G+ N +A +W+ +AA G A Y+ +
Sbjct: 169 ETVYWIQKAAHKGHVVAMRSMGMLSYSGLGMPENKVDAFKWFEKAASAGDAEAQYHLGMS 228
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE---------GEMMKAVVYLE 288
Y G+G ++ +W+ RAA KAQ ++ L+ + GE+ +A +LE
Sbjct: 229 YMAGKGTEKDGKKGEEWLYRAALQNQTKAQ-DYLSVLYVQRLLDKKNRPGEIEQARQWLE 287
Query: 289 LATRAGETAADHVKNVILQQLSATSRDRA 317
A R + A ++ NVI Q TS+++A
Sbjct: 288 NAARRNDKNAIYMLNVIEQYSRKTSKNQA 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
++ G+GV +NL A + A +G +M+ G M +DK E A + +A
Sbjct: 884 YETGQGVAQNLALAFKWYKMAAEKGDVGSMITTGKM---LDKGEGTARDSKQAFYWFSKA 940
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVD 209
A G P A+ A+ ++AV L ++ G+ AQY + LCLH G+GV+
Sbjct: 941 AEKGSPEAEVQLGQLYYAGRGISADMKKAVSLFDHSARQGNALAQYWMGYLCLH-GKGVE 999
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N A W +AA A + + Y G G+P QA W +AA +AQ
Sbjct: 1000 KNEPLARDWLEKAAVQNQTGAAFELAKQYWNGNGIPSDPEQAIVWFTKAAQNNDVQAQ 1057
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N E + L + + G+ +Q+ L L G G+ N +EA RW+ +AA+ G + A
Sbjct: 314 NQAETLDTLRRRAEQGNADSQFMLGEALLAGTGMKKNPEEAVRWFEKAAKQGNIDAQSAL 373
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
+ FG +P+ + +A +K+ AD G+ +AQ G G KA E A
Sbjct: 374 GYMHYFGVHVPVDYAKAIPLLKQGADKGNSQAQTAMGFAYASGTGIAKNEQKAFELFEKA 433
Query: 291 TRAGETAADHVKNVILQQLSATSRD 315
R +A +L+ T R+
Sbjct: 434 ARNNVRSAQFYLGEMLENGIGTQRN 458
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 111 FKHGRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAA 164
+ H GV +D KA+ +GA +G++ A G Y ++ A L+ +AA
Sbjct: 375 YMHYFGVHVPVDYAKAIPLLKQGADKGNSQAQTAMGFAYASGTGIAKNEQKAFELFEKAA 434
Query: 165 -------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+L + N E + + +++ AG+ +AQ+ + + RG+ N
Sbjct: 435 RNNVRSAQFYLGEMLENGIGTQRNVPEGLAWIEKSAKAGYDQAQFTMGINALRGKDKMQN 494
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ EA +W AA+ + A Y + Y GE P + ++ W +AA H +A+L
Sbjct: 495 IDEARKWMRLAAKQNHAEAQYMLGMSYFLGELTPENQKEGIFWWDKAAAQNHVEARL 551
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +AV +A+ H +QY L L L+ V N ++A +W+ +AA + + Y
Sbjct: 603 NVPKAVDFFSKAADLNHTESQYMLGLILYSKTDVGQNKKQACQWFEKAASHNHPESQYML 662
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
+C G ++A + ++ AAD AQ + G G +M KA+ + LA
Sbjct: 663 GICVLEGNHTSADKKKALELIRLAADKNVSIAQNKMGYLYETGHIVPKDMKKAIEWYTLA 722
Query: 291 TRAGETAA 298
+ G T A
Sbjct: 723 EQNGFTDA 730
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAIS 158
++ GK G G ++ +A F K A +GS A V G +Y+ D K+A +S
Sbjct: 913 MITTGKMLDKGEGTARDSKQAFYWFSKAAEKGSPEAEVQLGQLYYAGRGISADMKKA-VS 971
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L+ +A G+ AQ N A L +A++ A ++LA G
Sbjct: 972 LFDHSARQGNALAQYWMGYLCLHGKGVEKNEPLARDWLEKAAVQNQTGAAFELAKQYWNG 1031
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF---GEGLPLSHRQARKWMKRAA 259
G+ + ++A W+ +AA+ V+A + YS +G+ ++A W +AA
Sbjct: 1032 NGIPSDPEQAIVWFTKAAQNNDVQAQRALAFIYSVHGAKKGIKPDDQKAFYWANKAA 1088
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 82/216 (37%), Gaps = 24/216 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
C S ++ + +R+ L G+ F G +KN+ KA+D F K A T + GL+
Sbjct: 570 CSSISEQMHDIRDPDALYSLGELFFFGNDNHKKNVPKAVDFFSKAADLNHTESQYMLGLI 629
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
LY + V N ++A + +A+ H +QY L +C+ G
Sbjct: 630 ------------LYSKTDV-------GQNKKQACQWFEKAASHNHPESQYMLGICVLEGN 670
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ ++A AA+ A Y G +P ++A +W A G A
Sbjct: 671 HTSADKKKALELIRLAADKNVSIAQNKMGYLYETGHIVPKDMKKAIEWYTLAEQNGFTDA 730
Query: 267 QLEHGLGLFTEGEMMK----AVVYLELATRAGETAA 298
L ++ A+ YLE A A T A
Sbjct: 731 AYHLALLYLASSPPLQNDPLALRYLEKAASANNTNA 766
>gi|319776413|ref|YP_004138901.1| hypothetical protein HICON_16160 [Haemophilus influenzae F3047]
gi|317451004|emb|CBY87234.1| TPR repeat, SEL1 subfamily [Haemophilus influenzae F3047]
Length = 255
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
PL E A V G + G+GV+++ +A+ F K A +G A G MY
Sbjct: 54 PLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMY------ 107
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
D + EAVK +A+ G+ AQ L + GRGV +
Sbjct: 108 -------------SDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGVMYANGRGVKQDYF 154
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A +WY +A E GY A N YS G G+ + +A KW K+AA+ G Q + GL
Sbjct: 155 KAVKWYRKAVEQGYANAQANLGSAYSAGRGVRQDYTEAVKWFKKAAENGSADGQFKLGL 213
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + ++ + A KL + Q+ L + +G+GV + EA +W+ +AAE G
Sbjct: 36 GLTAYEQSDYQTAFKLWLPLAEQSDANVQFNLGVIYAKGQGVKQDDFEAVKWFRKAAEQG 95
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMM 281
+ A ++ YS G G+ +A KW ++AAD G+ AQ+ G+ ++ G +
Sbjct: 96 HAEAQFSLGNMYSDGIGVKQDDFEAVKWYRKAADQGYAGAQMNLGV-MYANGRGVKQDYF 154
Query: 282 KAVVYLELATRAG 294
KAV + A G
Sbjct: 155 KAVKWYRKAVEQG 167
>gi|260753384|ref|YP_003226277.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|384411703|ref|YP_005621068.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|258552747|gb|ACV75693.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|335932077|gb|AEH62617.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 315
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EA 155
+A LL G + G+GV KN KA+ K A + A G +Y D E
Sbjct: 126 DAQTLL--GAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEK 183
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
AIS Y++AA AQ P N E++ +A++ G + Q+ L
Sbjct: 184 AISWYQKAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLAC 243
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV N +EA W+ +AA+ G ++A L Y+ GEG+P S +A W+K+AA G
Sbjct: 244 LKGEGVAKNPREAVSWFQKAADQGNLQATTRLGLAYASGEGVPASKEKAVFWLKKAAGQG 303
Query: 263 HGKAQ 267
AQ
Sbjct: 304 EPNAQ 308
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKK 153
+A LL G ++ G G+ KN +KA+ + K A +G+ A G Y + D+K
Sbjct: 90 DAETLL--GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQK 147
Query: 154 ------EAAISLYRQAAVL-------GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+AA + QA GDPA + N E+A+ +A+ V AQ L +
Sbjct: 148 AIFWLQKAADQAFPQAQNFLGEVYETGDPAVR--NIEKAISWYQKAAEGNSVTAQAHLGM 205
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
H G + N +++ W+ +AA G + + L GEG+ + R+A W ++AAD
Sbjct: 206 AYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLACLKGEGVAKNPREAVSWFQKAAD 265
Query: 261 CGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHV 301
G+ +A GL + GE + KAV +L+ A GE A +
Sbjct: 266 QGNLQATTRLGLA-YASGEGVPASKEKAVFWLKKAAGQGEPNAQRI 310
>gi|145637541|ref|ZP_01793198.1| hypothetical protein CGSHiHH_04235 [Haemophilus influenzae PittHH]
gi|145269227|gb|EDK09173.1| hypothetical protein CGSHiHH_04235 [Haemophilus influenzae PittHH]
Length = 254
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
AI+ + V D + EAVK QA+ G+ RAQY L + GRG+ + EA
Sbjct: 60 AIAQFLLGGVYEDGIGVKQDDFEAVKWYRQAAEQGYARAQYNLGVMYDDGRGIKQDDFEA 119
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+WY +AAE G A YN Y+ G G+ + +A KW ++AA+ G +AQL
Sbjct: 120 VKWYRQAAEQGNAEAQYNLGNMYANGRGVKQDNFEAVKWFRKAAEQGDAEAQL 172
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 95 LRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---- 147
L+PL E A+ G ++ G GV+++ +A+ + + A +G A + G+MY
Sbjct: 51 LQPLAEQGDAIAQFLLGGVYEDGIGVKQDDFEAVKWYRQAAEQGYARAQYNLGVMYDDGR 110
Query: 148 -WEMDKKEAAISLYRQAAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVR 193
+ D EA + YRQAA G+ AQ AN EAVK +A+ G
Sbjct: 111 GIKQDDFEA-VKWYRQAAEQGNAEAQYNLGNMYANGRGVKQDNFEAVKWFRKAAEQGDAE 169
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L GRGV + EA +W+ +AA+ G+ +A L Y G+G+ ++ A++
Sbjct: 170 AQLILGAMYGDGRGVKQDDFEAVKWFRKAADQGHAKAQVLLGLSYILGKGVQVNKVLAKE 229
Query: 254 WMKRAADCGH 263
W +A D G
Sbjct: 230 WFGKACDNGE 239
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ L G GV + EA +WY +AAE GY RA YN + Y G G+
Sbjct: 58 GDAIAQFLLGGVYEDGIGVKQDDFEAVKWYRQAAEQGYARAQYNLGVMYDDGRGIKQDDF 117
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAA 298
+A KW ++AA+ G+ +AQ G ++ G +K AV + A G+ A
Sbjct: 118 EAVKWYRQAAEQGNAEAQYNLG-NMYANGRGVKQDNFEAVKWFRKAAEQGDAEA 170
>gi|54294116|ref|YP_126531.1| hypothetical protein lpl1180 [Legionella pneumophila str. Lens]
gi|53753948|emb|CAH15419.1| hypothetical protein lpl1180 [Legionella pneumophila str. Lens]
Length = 490
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++ G GV+K+L KA+ + K A +G A + G++Y + + + A+ +++A
Sbjct: 52 GLQYEKGDGVKKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVSQNSQQAMHWFKKA 111
Query: 164 AVLGDPAAQP------ANAEEAVKLLYQASI-------AGHVRAQYQLALCLHRGRGVDF 210
+ G Q N K L QA I G+ QY LA+ G G+
Sbjct: 112 SEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPK 171
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
++++A WY++AAE G + A N + Y GE +P + A W RAA+ G AQ
Sbjct: 172 DIKKAIHWYIKAAEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNL 231
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G+ L+ G + KA+ + E A G A + I +Q T +D
Sbjct: 232 GV-LYMTGDPSIQDGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGVGTEKD 280
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 268 GYIYEQGVGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 327
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ N EAV +A+ G AQ+ LA+ +G G+ +
Sbjct: 328 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 387
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +WY +AAE G A N ++ Y GEG+ + ++A W ++AA+ G AQ+ G
Sbjct: 388 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKIDFKKAMYWYQKAAEQGLDLAQINLG 447
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 303
+ G+ + + KA ++ A +G A + N
Sbjct: 448 IMYLDGMGVDKDFAKAKYWIGKAKDSGSQDALTIWN 483
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ++L L +G GV +L++A WY +AA+ G A N + Y GEG+ + +
Sbjct: 43 GDAQAQFELGLQYEKGDGVKKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVSQNSQ 102
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
QA W K+A++ G Q G+ GL + ++ +A ++ + A G + +
Sbjct: 103 QAMHWFKKASEQGLAIGQNNIGILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQY 157
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV+K+L +A + K A G++ + +MY + + AI Y +A
Sbjct: 124 GILYENGLGVKKDLGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKA 183
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + + A+ +A+ G + AQ L + G
Sbjct: 184 AEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQ 243
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G +A N Y G G ++A W ++AA+ G AQ
Sbjct: 244 DGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGVGTEKDMKKAIYWYEKAAENGFTLAQNNL 303
Query: 271 GLGLFTEGEMM---KAVVYLELATRAG 294
G+ +GE+ KA ++ + A G
Sbjct: 304 GVLYSNDGELQDYKKAYLWFKKAADQG 330
>gi|328771981|gb|EGF82020.1| hypothetical protein BATDEDRAFT_10115 [Batrachochytrium
dendrobatidis JAM81]
Length = 562
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
L E++ + ++ G GV K+L A+ + K A G+ A G M+ E +++ +
Sbjct: 170 LGESVSMYNVAHCYEEGVGVAKDLTLAIHWYRKSAECGNCYAQNSLGYMHEEGHGVERSD 229
Query: 155 A-AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLAL 200
A A+ Y+ +A G P AQ N ++A++ GH RAQ+ L
Sbjct: 230 ADAVKWYKLSAEQGYPWAQCNLGFCLQNGIGTDRNEILGSYWYHKAAVQGHSRAQHNLGH 289
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G GV+ N A +WY R+A G AM++ CY +G G+ + A AA
Sbjct: 290 AYQYGIGVEQNEALAVQWYQRSASSGNSYAMHSLGYCYQYGIGVDIDESMALTLYHEAAK 349
Query: 261 CGHGKAQLEHG 271
GHG AQL G
Sbjct: 350 LGHGPAQLSLG 360
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G +++G GV +N A+ + + A+ G++ AM G Y +D E+ A++LY +A
Sbjct: 288 GHAYQYGIGVEQNEALAVQWYQRSASSGNSYAMHSLGYCYQYGIGVDIDESMALTLYHEA 347
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LG AQ + +EA K + ++ + AQ L G G
Sbjct: 348 AKLGHGPAQLSLGCCYRSGIGAKVDEKEAFKWIQLSAEGNNALAQNTLGHLYEDGIGTAA 407
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 269
N++ A WY ++AE V A+ N ++ YS G G+P + +A + ++ AAD H +AQ
Sbjct: 408 NIERAVFWYTQSAEQNNVWALTNLAILYSDGNGVPQNDTEAVRLLRLAADQNHVRAQTRL 467
Query: 270 ---HGLGLFTEGEMMKAVVYLELATRAGETAA 298
+G +++A+ + E A G +A
Sbjct: 468 ADMLAVGRGCTANLVQALAWYEKAADQGSVSA 499
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D P AE+AV ++++ H R L C G GV NL+ A ++YLRAA G
Sbjct: 113 DGIGVPKCAEKAVYYYKRSAVFNHPRGLGILGFCYGEGYGVPKNLEVAFQYYLRAATLGE 172
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----- 282
+MYN + CY G G+ A W +++A+CG+ AQ G + EG ++
Sbjct: 173 SVSMYNVAHCYEEGVGVAKDLTLAIHWYRKSAECGNCYAQNSLGY-MHEEGHGVERSDAD 231
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
AV + +L+ G A LQ T R+ +
Sbjct: 232 AVKWYKLSAEQGYPWAQCNLGFCLQNGIGTDRNEIL 267
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G G N+++A+ + + A + + A+ + ++Y
Sbjct: 396 GHLYEDGIGTAANIERAVFWYTQSAEQNNVWALTNLAILY-------------------S 436
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D P N EAV+LL A+ HVRAQ +LA L GRG NL +A WY +AA+ G
Sbjct: 437 DGNGVPQNDTEAVRLLRLAADQNHVRAQTRLADMLAVGRGCTANLVQALAWYEKAADQGS 496
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
V AM + Y G G ++ +W ++AA G
Sbjct: 497 VSAMGIVARYYEEGLGCISDIAKSIEWYEKAASWG 531
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 17/184 (9%)
Query: 154 EAAISLYRQAAVLGDP-------------AAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
E A+ Y+++AV P P N E A + +A+ G + Y +A
Sbjct: 122 EKAVYYYKRSAVFNHPRGLGILGFCYGEGYGVPKNLEVAFQYYLRAATLGESVSMYNVAH 181
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
C G GV +L A WY ++AE G A + + G G+ S A KW K +A+
Sbjct: 182 CYEEGVGVAKDLTLAIHWYRKSAECGNCYAQNSLGYMHEEGHGVERSDADAVKWYKLSAE 241
Query: 261 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
G+ AQ G G+ T+ + + A G + A H Q ++
Sbjct: 242 QGYPWAQCNLGFCLQNGIGTDRNEILGSYWYHKAAVQGHSRAQHNLGHAYQYGIGVEQNE 301
Query: 317 AMLV 320
A+ V
Sbjct: 302 ALAV 305
>gi|290979302|ref|XP_002672373.1| predicted protein [Naegleria gruberi]
gi|284085949|gb|EFC39629.1| predicted protein [Naegleria gruberi]
Length = 370
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV KN++ AL F K A + A + G+ Y + K A+ +++A
Sbjct: 124 GYLYQEGLGVPKNIEIALQFFEKSANQNHVKAQNNLGVQYLAIGDKSKALYWFKKA---- 179
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
S G+ +AQY L RG V+ N A WYL++AEGGY
Sbjct: 180 -------------------SDNGYAKAQYNLGGFYARGDAVEKNPFTAFDWYLKSAEGGY 220
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-HGKAQLEHGLGLFTEGEMMKAVVY 286
V + +N + Y G G+ ++ +W+++AA G G H + ++ + V +
Sbjct: 221 VHSQHNVGIMYFNGIGVKQDYQIGIQWLEKAASQGFQGSIAALHEI---SKKDYSTDVNW 277
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
LE G+ +A + + + D+A +
Sbjct: 278 LEQLANKGDVSAQNNLGAMYNMGTGVKEDKAKAI 311
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
+++LL + G AQ L G GVD + ++A WY ++AE A +N Y
Sbjct: 68 SLELLQLQADTGDSIAQNNLGAAYQNGTGVDIDYKKAVYWYEKSAEQNNSEAQFNLGYLY 127
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
G G+P + A ++ +++A+ H KAQ G+ G+ KA+ + + A+ G A
Sbjct: 128 QEGLGVPKNIEIALQFFEKSANQNHVKAQNNLGVQYLAIGDKSKALYWFKKASDNGYAKA 187
Query: 299 DH 300
+
Sbjct: 188 QY 189
>gi|221068722|ref|ZP_03544827.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713745|gb|EED69113.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 252
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 87/229 (37%), Gaps = 49/229 (21%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
GRG KN ++A F+ A +G + + GLMY E A+ YR AA GD
Sbjct: 50 GRGAPKNDEEAARWFMLAAKQGHAESQSNIGLMYGRGRGVPQSDEEAVKWYRLAAEQGDA 109
Query: 170 AA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
N EEAV+L A HV +Q L GRGV + QEA
Sbjct: 110 DGLFNLAVMYDDGRGVAENQEEAVRLYRLAVAQNHVSSQSNLGYMYDHGRGVAQDSQEAF 169
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
RWY+ AAE G + +N Y+ G G+ S QA W
Sbjct: 170 RWYMTAAEQGDANSQFNVGSMYALGRGVRQSWPQAYFWAL-------------------- 209
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
LA R GE + + +I ++L R + L V W+
Sbjct: 210 ------------LAARDGEKDSAKQQEIIAKKLKPAQRAKIQLQVQEWK 246
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L QA+ G ++Q++LA GRG N +EAARW++ AA+ G+ + N L Y G
Sbjct: 28 LLQAAEGGDAQSQFKLAAAYLTGRGAPKNDEEAARWFMLAAKQGHAESQSNIGLMYGRGR 87
Query: 243 GLPLSHRQARKWMKRAADCG 262
G+P S +A KW + AA+ G
Sbjct: 88 GVPQSDEEAVKWYRLAAEQG 107
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
L+AAEGG ++ + + Y G G P + +A +W AA GH ++Q GL ++ G
Sbjct: 29 LQAAEGGDAQSQFKLAAAYLTGRGAPKNDEEAARWFMLAAKQGHAESQSNIGL-MYGRGR 87
Query: 280 MM-----KAVVYLELATRAGETAADHVKNVIL 306
+ +AV + LA G+ AD + N+ +
Sbjct: 88 GVPQSDEEAVKWYRLAAEQGD--ADGLFNLAV 117
>gi|182417066|ref|ZP_02948444.1| Sel1 repeat family [Clostridium butyricum 5521]
gi|237668948|ref|ZP_04528932.1| Sel1 repeat family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379075|gb|EDT76579.1| Sel1 repeat family [Clostridium butyricum 5521]
gi|237657296|gb|EEP54852.1| Sel1 repeat family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 267
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAA 156
+ + G + G GV ++ K ++ + K A++G+ A + G MY E D KEA
Sbjct: 76 VAMYNLGDMYYCGLGVAQDYCKTIEWYKKAASKGNCNAQCNLGCMYEEGQGIECDYKEA- 134
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ Y +AA+ GD AQ + EEA +++ G+ +AQ +
Sbjct: 135 LKWYTEAAIQGDYFAQYNLAGMYMHSKGVEEDCEEAFIWYEKSAKQGYEKAQNTIGYMYE 194
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+G GV + +EA +WY AAE GY A YN + Y G+G+ + A W KR+A H
Sbjct: 195 KGLGVKRDYKEAIKWYKEAAEFGYPYAEYNLAGMYYKGKGVQRNLSSAYSWYKRSA--AH 252
Query: 264 G 264
G
Sbjct: 253 G 253
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G R+ +G V + +A+ + K A G +AM + G MY+ I Y++A
Sbjct: 46 GDRYFNGDTVDTDYKEAVKWYKKAAFSGYDVAMYNLGDMYYCGLGVAQDYCKTIEWYKKA 105
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + +EA+K +A+I G AQY LA +GV+
Sbjct: 106 ASKGNCNAQCNLGCMYEEGQGIECDYKEALKWYTEAAIQGDYFAQYNLAGMYMHSKGVEE 165
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA WY ++A+ GY +A Y G G+ +++A KW K AA+ G+ A E+
Sbjct: 166 DCEEAFIWYEKSAKQGYEKAQNTIGYMYEKGLGVKRDYKEAIKWYKEAAEFGYPYA--EY 223
Query: 271 GL-GLFTEGE 279
L G++ +G+
Sbjct: 224 NLAGMYYKGK 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ RAQ L G VD + +EA +WY +AA GY AMYN Y G G+ +
Sbjct: 37 GNARAQNILGDRYFNGDTVDTDYKEAVKWYKKAAFSGYDVAMYNLGDMYYCGLGVAQDYC 96
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ +W K+AA G+ AQ G ++ EG+
Sbjct: 97 KTIEWYKKAASKGNCNAQCNLGC-MYEEGQ 125
>gi|375147850|ref|YP_005010291.1| Sel1 domain-containing protein repeat-containing protein [Niastella
koreensis GR20-10]
gi|361061896|gb|AEW00888.1| Sel1 domain protein repeat-containing protein [Niastella koreensis
GR20-10]
Length = 370
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 29/221 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLY 160
G ++ G GV + +A+ F + A G+ AM + G +Y DK AI Y
Sbjct: 75 GLMYQRGNGVTIDYKQAMAYFQQAAKDGNISAMSNIGYLY---DKALGVTEDNLTAIKWY 131
Query: 161 RQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++AA GD A + +A++L +A+ G + + G G
Sbjct: 132 KKAADAGDLDALFNLAWMYDHGEGVSIDYPKAMQLYKKAAEGGSGSSMNNIGWLYEHGEG 191
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
VD + EA +WY +AAE G A+ N Y GEG+ + ++QA W ++A G +
Sbjct: 192 VDTSFNEAMKWYKKAAENGEPEAINNVGYMYENGEGVNIDYKQAMDWYQKAVKAGSSRGM 251
Query: 268 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNV 304
GL GL + + A+V+ AG D + NV
Sbjct: 252 NNIGLLYQKGLGVKVDYKTAMVWYNKGANAG--CGDAMNNV 290
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
+A+ L W + HG GV + KA+ + K A GS +M + G +Y + +
Sbjct: 141 DALFNLAW--MYDHGEGVSIDYPKAMQLYKKAAEGGSGSSMNNIGWLYEHGEGVDTSFNE 198
Query: 156 AISLYRQAAVLGDPAA------QPANAE-------EAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y++AA G+P A N E +A+ +A AG R + L
Sbjct: 199 AMKWYKKAAENGEPEAINNVGYMYENGEGVNIDYKQAMDWYQKAVKAGSSRGMNNIGLLY 258
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV + + A WY + A G AM N Y GEG+ ++++ A +W K+ A
Sbjct: 259 QKGLGVKVDYKTAMVWYNKGANAGCGDAMNNVGWLYQNGEGVAVNYKTAMEWYKKGAQ-- 316
Query: 263 HGKAQLEHGLGLF-TEGEMMKA 283
+ A + LG F G+ +KA
Sbjct: 317 YESADAMNNLGWFYANGKGVKA 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV + ++A+ + K A G A+ + G MY + E Y+QA
Sbjct: 183 GWLYEHGEGVDTSFNEAMKWYKKAAENGEPEAINNVGYMY---ENGEGVNIDYKQAMDWY 239
Query: 168 DPAAQPANAE--EAVKLLYQASIAGHVRAQYQLALCLHR--------------------G 205
A + ++ + LLYQ + V+ Y+ A+ + G
Sbjct: 240 QKAVKAGSSRGMNNIGLLYQKGLG--VKVDYKTAMVWYNKGANAGCGDAMNNVGWLYQNG 297
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV N + A WY + A+ AM N Y+ G+G+ + A W +A G
Sbjct: 298 EGVAVNYKTAMEWYKKGAQYESADAMNNLGWFYANGKGVKANDSLAIDWYNKAIKAGSAD 357
Query: 266 AQ 267
A+
Sbjct: 358 AK 359
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A+++ A+ AG A L L RG GV + ++A ++ +AA+ G + AM N
Sbjct: 54 DALRVWKNAAEAGSSDAVNFLGLMYQRGNGVTIDYKQAMAYFQQAAKDGNISAMSNIGYL 113
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGL 274
Y G+ + A KW K+AAD G A +HG G+
Sbjct: 114 YDKALGVTEDNLTAIKWYKKAADAGDLDALFNLAWMYDHGEGV 156
>gi|421881396|ref|ZP_16312731.1| hypothetical protein HBZS_111760 [Helicobacter bizzozeronii CCUG
35545]
gi|375316389|emb|CCF80727.1| hypothetical protein HBZS_111760 [Helicobacter bizzozeronii CCUG
35545]
Length = 439
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 17/180 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKE--AAISL 159
L+ G + +GRGV ++ +AL+ F + A G + V+ G+MY + KK+ A+
Sbjct: 73 LVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVNLGVMYNLGKGIKKDYQKALDF 132
Query: 160 YRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
++Q A D A N ++A++L QA+ G VRA L + G
Sbjct: 133 FKQGAEFNDVNAINYMALMYRTGKGVGVNYQKALELYEQAANLGSVRALVSLGTMHYNGH 192
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV N +A ++ RAA+ G RA YN ++ GEG+ Q+R++ K +A G KA
Sbjct: 193 GVAKNYPQAIEYFKRAADMGDARAYYNLAIMCEGGEGMDKDTEQSREFFKESAKLGFTKA 252
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++ G GV K+LDKA++ + + G A+ +Y E DK AI+ Y++AA
Sbjct: 260 YESGDGVDKDLDKAIELYQEAGNMGDADALASLANLYRVGKGVEQDKY-TAIAYYKEAAD 318
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQ--YQLALCLHRGRGVDFNLQEAARWYLRAA 223
LGD A L + G +AQ Y L + +G+ + Q+A ++ +AA
Sbjct: 319 LGDSQA-------LANLNAMSDRGGSQKAQELYNLGVVYSSDQGIAKDEQKALEYFTQAA 371
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+ G+ +A YN YS G G+P QA + AA G KA + LGL E
Sbjct: 372 KLGHAKAYYNLGTIYSEGLGVPKDLEQAFSCFQEAAKLGDDKAY--YNLGLMCE 423
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPA-------- 170
+AL ++ + A GS+ A+V G+MY + + +A A++ ++QAA LGD
Sbjct: 56 EALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVNLGVM 115
Query: 171 -----AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+ ++A+ Q + V A +AL G+GV N Q+A Y +AA
Sbjct: 116 YNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGKGVGVNYQKALELYEQAANL 175
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
G VRA+ + + G G+ ++ QA ++ KRAAD G +A + L + EG
Sbjct: 176 GSVRALVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAY--YNLAIMCEG 226
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV N KAL+ + + A GS A+V G M++ AI +++AA +
Sbjct: 152 YRTGKGVGVNYQKALELYEQAANLGSVRALVSLGTMHYNGHGVAKNYPQAIEYFKRAADM 211
Query: 167 GDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD A + E++ + +++ G +A Y LA G GVD +L
Sbjct: 212 GDARAYYNLAIMCEGGEGMDKDTEQSREFFKESAKLGFTKATYTLASMYESGDGVDKDLD 271
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A Y A G A+ + + Y G+G+ A + K AAD G +A
Sbjct: 272 KAIELYQEAGNMGDADALASLANLYRVGKGVEQDKYTAIAYYKEAADLGDSQA 324
>gi|329849411|ref|ZP_08264257.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328841322|gb|EGF90892.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 555
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKE-AA 156
A+ ++ + GRG+RKN +A A G A D ++Y + K E +A
Sbjct: 236 ALAQRQFARMLGQGRGIRKNDGEAFKWMKLAADSGLMDAQFDVAMLYGNGNGVAKDEVSA 295
Query: 157 ISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLH 203
YR+AA GD AQ + EA + ++ G V AQY LAL
Sbjct: 296 AYWYRKAAEQGDREAQFNLAVRLMKGTGVLRDDAEAFTWMKLSAEQGLVNAQYHLALLYE 355
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
GRG D ++ + +W +AA G+ A Y+ + G+G P + + +W K AAD GH
Sbjct: 356 LGRGTDMDMAQRNQWMEKAANQGWAAAQYDVGVRVYKGDGFPKNEAEGMRWFKLAADQGH 415
Query: 264 GKA 266
KA
Sbjct: 416 EKA 418
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 29/212 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+ V ++ +AL + A +G A + G +Y E D EA + Y
Sbjct: 63 GNDYYEGKVVPQDYAQALKWYRLAADQGDARAYHNLGTIYLEGKVVTQDYAEA-LKWYHM 121
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G +Q N E + K + +A+ G +QY + L +GRGV
Sbjct: 122 AADQGLVYSQIRLSEMYSRGYGVEKNDETSAKWMRKAAEQGDAASQYNFGIILSKGRGVA 181
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-- 267
+ EA +W+ AAE G + A Y + + G G+ S + A W ++AA+ GH AQ
Sbjct: 182 EDDVEAVKWFSLAAEQGDIDAQYALGVAFINGAGVEKSDKAAVAWFRKAAEQGHALAQRQ 241
Query: 268 ----LEHGLGL-FTEGEMMKAVVYLELATRAG 294
L G G+ +GE K +++LA +G
Sbjct: 242 FARMLGQGRGIRKNDGEAFK---WMKLAADSG 270
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G + G+ V ++ +AL + A +G + + MY + ++K E + R+A
Sbjct: 99 GTIYLEGKVVTQDYAEALKWYHMAADQGLVYSQIRLSEMYSRGYGVEKNDETSAKWMRKA 158
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD A+Q + EAVK A+ G + AQY L + G GV+
Sbjct: 159 AEQGDAASQYNFGIILSKGRGVAEDDVEAVKWFSLAAEQGDIDAQYALGVAFINGAGVEK 218
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 269
+ + A W+ +AAE G+ A + G G+ + +A KWMK AAD G AQ +
Sbjct: 219 SDKAAVAWFRKAAEQGHALAQRQFARMLGQGRGIRKNDGEAFKWMKLAADSGLMDAQFDV 278
Query: 270 ---HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
+G G + + A + A G+ A V L + + RD A
Sbjct: 279 AMLYGNGNGVAKDEVSAAYWYRKAAEQGDREAQFNLAVRLMKGTGVLRDDA 329
>gi|167380701|ref|XP_001735416.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902596|gb|EDR28375.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 305
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L+ A GST+AM + G Y+ LG+ N +EAVK Y+++
Sbjct: 11 LQAANNGSTIAMFNVGCWYY-----------------LGENF--KMNKKEAVKWYYKSAK 51
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G +A L C G G++ N ++A +W+ R+A+ G V +N S CY +G+G +
Sbjct: 52 EGCGKAMCNLGRCYFDGEGIECNKKKAFKWFKRSAKKGVVSGQFNCSNCYYYGDGTQRNI 111
Query: 249 RQARKWMKRAADCGHGKAQLEHG 271
+A W K A+ GH +A + +G
Sbjct: 112 DKAMYWSKLASINGHARAFIIYG 134
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G A + + + G N +EA +WY ++A+ G +AM N CY GEG+
Sbjct: 12 QAANNGSTIAMFNVGCWYYLGENFKMNKKEAVKWYYKSAKEGCGKAMCNLGRCYFDGEGI 71
Query: 245 PLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAGETAA 298
+ ++A KW KR+A G Q + G T+ + KA+ + +LA+ G A
Sbjct: 72 ECNKKKAFKWFKRSAKKGVVSGQFNCSNCYYYGDGTQRNIDKAMYWSKLASINGHARA 129
>gi|432583904|ref|ZP_19820304.1| hypothetical protein A1SM_03125, partial [Escherichia coli KTE57]
gi|431116554|gb|ELE19997.1| hypothetical protein A1SM_03125, partial [Escherichia coli KTE57]
Length = 514
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 196 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 255
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 256 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 315
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 316 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 375
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 376 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 419
>gi|146343786|ref|YP_001208834.1| hypothetical protein BRADO7034 [Bradyrhizobium sp. ORS 278]
gi|146196592|emb|CAL80619.1| Conserved hypothetical protein; putative TPR repeats; putative
Beta-lactamase [Bradyrhizobium sp. ORS 278]
Length = 650
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 117/270 (43%), Gaps = 59/270 (21%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYR 161
R G+ +HGRG ++LD A D + K AA+G G +Y++ AAI YR
Sbjct: 160 RMGELCRHGRGCPRDLDAARDWYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYR 219
Query: 162 QAAVLGDPAAQPANAE-------------EAVKLLYQAS--------------------I 188
QAA G AQ A A EAV+L +A+ +
Sbjct: 220 QAAEAGHARAQVALASCYQNGTGVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGV 279
Query: 189 A----------------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
A GH+ A LA RG G + +L+EAA+WY AAE G V+A +
Sbjct: 280 AQSIDRAETALRKGARKGHLPAIQALAEFYARGLGGEPDLREAAQWYQAAAEKGDVQAQF 339
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYL 287
T Y+ G G+ S R+A KW RAA+ GH A + + +G ++ A+ +
Sbjct: 340 FTGRFYATGSGVAPSVREAAKWFLRAAEGGHATAAFNIAV-FYRDGTGIARDVPAAISWF 398
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRA 317
E A+ AG +AAD I + RD A
Sbjct: 399 EKASAAGISAADIQLGRIYAAGAGIERDPA 428
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F G GV +++D+A + KGA +G A+ A++ + + G
Sbjct: 270 GLAFLSGDGVAQSIDRAETALRKGARKGHLPAI--------------QALAEFYARGLGG 315
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+P + EA + A+ G V+AQ+ G GV +++EAA+W+LRAAEGG+
Sbjct: 316 EP-----DLREAAQWYQAAAEKGDVQAQFFTGRFYATGSGVAPSVREAAKWFLRAAEGGH 370
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKA 283
A +N ++ Y G G+ A W ++A+ G A ++ G G E + +A
Sbjct: 371 ATAAFNIAVFYRDGTGIARDVPAAISWFEKASAAGISAADIQLGRIYAAGAGIERDPARA 430
Query: 284 VVYLELATRAGETAADHVKNVILQQ 308
+L A G+ A ++L Q
Sbjct: 431 AHWLAKAAEGGDAEARTALALVLLQ 455
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A+ +A+ A +A+ AGH + +QL + G GVD +L + WY AA G+
Sbjct: 527 DTASALTDAKAAFAWFEKAARAGHAPSAFQLGVMYCTGNGVDMDLAQGVAWYEAAAREGH 586
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
A YN ++ S G+G +A +W++
Sbjct: 587 PFAQYNLAVMLSKGQGCERDQVKAVEWLR 615
>gi|221235062|ref|YP_002517498.1| polar development protein podJ [Caulobacter crescentus NA1000]
gi|29429226|sp|Q9ZG88.2|PODJ_CAUCR RecName: Full=Localization factor PodJL; AltName: Full=Polar
organelle development protein; Contains: RecName:
Full=Localization factor PodJS
gi|251764811|sp|B8GXA0.1|PODJ_CAUCN RecName: Full=Localization factor PodJL; AltName: Full=Polar
organelle development protein; Contains: RecName:
Full=Localization factor PodJS
gi|24110907|tpg|DAA00313.1| TPA_exp: polar organelle development protein [Caulobacter
vibrioides]
gi|220964234|gb|ACL95590.1| polar development protein podJ [Caulobacter crescentus NA1000]
Length = 974
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 28/177 (15%)
Query: 169 PAAQPANAEEA----------------VKLLYQASIAGHVRAQYQLALCLHRGR-GVDFN 211
PAA P N +A V+LL +A+ G+ AQ+ L+ G+ GV +
Sbjct: 718 PAAPPTNEAKALFEDAVRKIESGDRSGVELLKRAANGGYPAAQFYLSKMYEGGKNGVKVD 777
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL--- 268
+ EA RW RAA GG RAM+N +L Y GEG P + A W ++AAD G +Q
Sbjct: 778 MAEARRWSERAANGGDPRAMHNLALYYFKGEGGPRNSTTAASWFRKAADMGLVDSQFNLA 837
Query: 269 ---EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR---DRAML 319
E GLG+ +A + +A RAG++ A + QL+A ++ DR+ L
Sbjct: 838 QLYESGLGVSQ--NPAEAYKWYVIAGRAGDSTARGRATALRSQLTAEAQQTADRSAL 892
>gi|445493773|ref|ZP_21460817.1| TPR repeat-containing protein [Janthinobacterium sp. HH01]
gi|444789934|gb|ELX11481.1| TPR repeat-containing protein [Janthinobacterium sp. HH01]
Length = 544
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P+N EA ++A+ AGHV+AQ + G+GV + +A WYL+AAE G +A
Sbjct: 193 PSNQIEAAIWYHKAAEAGHVQAQVETGYRYEHGKGVAQDYAQAMEWYLKAAEQGDHQAEN 252
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
N L +++G G+PL A +W ++AA+ GH Q LG+F
Sbjct: 253 NIGLLHAYGRGVPLDRAVAAEWYRKAAEGGHAWGQAN--LGMF 293
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R++HG+GV ++ +A++ +LK A +G A + GL++ Y +
Sbjct: 219 GYRYEHGKGVAQDYAQAMEWYLKAAEQGDHQAENNIGLLH-----------AYGRGV--- 264
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + A + +A+ GH Q L + GRGV+ +L A +W RAA
Sbjct: 265 -----PLDRAVAAEWYRKAAEGGHAWGQANLGMFYLYGRGVEKDLPLAQQWLERAAAQRN 319
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTE-GEMMK 282
A + S Y GEG+ S + +++RAA G +Q+ GL GL E + ++
Sbjct: 320 PAAERDLSAMYLRGEGVFHSDEEGALYLRRAAQDGDIASQIRWGLVLTYGLLGEKADPVQ 379
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
+ + A + G AA + + + ++D A
Sbjct: 380 GLAFQRTAAKTGNAAAQNNIGYAFEIGNGVAQDYA 414
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F+ G GV ++ A D + + A+G+ A A L Y K A L + A+
Sbjct: 400 GYAFEIGNGVAQDYAAARDWYTRAVAQGNGNAQ--AALGYMHEQGKGMAKDLSKAAS--- 454
Query: 168 DPAAQPANAEEAVKLLYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
LYQAS A + Y+LA GR V + +A Y R+AE
Sbjct: 455 ---------------LYQASAAQNNPDGLYRLATLTEAGRAVPQSASDALDLYRRSAELN 499
Query: 227 YVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRA 258
++ AM + Y GE GL QA++W ++A
Sbjct: 500 FLSAMRRLATAYEKGELGLKPDAAQAQQWREKA 532
>gi|374328612|ref|YP_005078796.1| Sel1 domain-containing protein repeat-containing protein
[Pseudovibrio sp. FO-BEG1]
gi|359341400|gb|AEV34774.1| Sel1 domain protein repeat-containing protein [Pseudovibrio sp.
FO-BEG1]
Length = 601
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 29/235 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G+ ++ G GV ++ +AL +++ A +G A + +MY D EA ++ Y
Sbjct: 337 GRIYEIGLGVDQDYSEALKWYIRAAEQGVADAQFNLAVMYANGTGISQDLVEA-VAWYHF 395
Query: 163 AAVLGDPAAQ----------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
AA G P AQ A A V+L A+ GH AQY++ G
Sbjct: 396 AAKQGHPDAQYNLGFLYATGQGVEQDEATAARWVRL---AANQGHAEAQYRIGRAYEDGV 452
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV+ N EAA WY AA + +A + Y+ G G+P +A KW+ AA+ G+ +A
Sbjct: 453 GVEQNHTEAANWYYLAATQNHAKAQFTLGRVYAIGLGVPQDEVEAAKWVLHAAERGYLEA 512
Query: 267 QLEHGLGLF----TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
Q GL + + + +A ++ +A G A + +L+A + A
Sbjct: 513 QYRIGLAFYKGSGVKQNIERAYIWFYIAAENGSKPALKAQKEAADRLNANEIEHA 567
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 37/161 (22%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
S Y+ + + P + +A K A+ GHV AQY++A H+GRGV + +EA +
Sbjct: 44 SQYKLGIIYEEAQGVPQDYAKAAKWFRSAAEQGHVAAQYRIANLYHKGRGVPQSFKEAEK 103
Query: 218 WY------------------------------------LRAAEGGYVRAMYNTSLCYSFG 241
WY L A+ GY A Y +L Y G
Sbjct: 104 WYQLAADKGHPKALSELEYLFNKGLIGPQSDDKVAMWTLHKAKQGYASAQYRLALLYHDG 163
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+G+P + +A KW +RAA GH AQLE G ++ G+ ++
Sbjct: 164 KGVPKDYSEAEKWYRRAASNGHSGAQLELGY-MYANGQGVQ 203
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
PA AE+ K + ++ G +QY+L + +GV + +AA+W+ AAE G+V A Y
Sbjct: 24 PAYAED-FKTISASAEQGDFHSQYKLGIIYEEAQGVPQDYAKAAKWFRSAAEQGHVAAQY 82
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QLEHGLGLFTEG 278
+ Y G G+P S ++A KW + AAD GH KA +LE+ LF +G
Sbjct: 83 RIANLYHKGRGVPQSFKEAEKWYQLAADKGHPKALSELEY---LFNKG 127
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQY+LAL H G+GV + EA +WY RAA G+ A Y+ G+G+ ++
Sbjct: 148 GYASAQYRLALLYHDGKGVPKDYSEAEKWYRRAASNGHSGAQLELGYMYANGQGVQQDYQ 207
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA----DH 300
+A KW +AA G+ AQLE G ++ +G + KA + LA G A D
Sbjct: 208 EAEKWYLKAAKQGNADAQLELGH-IYADGRGVSRDYEKAKEWYVLAASQGNMGAHRSLDQ 266
Query: 301 VKNV 304
+ N+
Sbjct: 267 ISNL 270
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ F +G G +N KA + F A +G A + G +Y E + +
Sbjct: 301 GRTFTNGIGTPQNHPKAAEKFRLAAEQGHANAQFNLGRIY------EIGLGV-------- 346
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ EA+K +A+ G AQ+ LA+ G G+ +L EA WY AA+ G+
Sbjct: 347 -----DQDYSEALKWYIRAAEQGVADAQFNLAVMYANGTGISQDLVEAVAWYHFAAKQGH 401
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A YN Y+ G+G+ A +W++ AA+ GH +AQ E G+G+
Sbjct: 402 PDAQYNLGFLYATGQGVEQDEATAARWVRLAANQGHAEAQYRIGRAYEDGVGV 454
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 114/284 (40%), Gaps = 35/284 (12%)
Query: 68 VLNKIAASFTLPQLRAASL------VCKSWNDALRPLREAM------VLLRWGKRFKHGR 115
L+K + Q R A L V K +++A + R A L G + +G+
Sbjct: 141 TLHKAKQGYASAQYRLALLYHDGKGVPKDYSEAEKWYRRAASNGHSGAQLELGYMYANGQ 200
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAA 171
GV+++ +A +LK A +G+ A ++ G +Y + E A Y AA G+ A
Sbjct: 201 GVQQDYQEAEKWYLKAAKQGNADAQLELGHIYADGRGVSRDYEKAKEWYVLAASQGNMGA 260
Query: 172 -----QPANAEEAVKLLYQASIAGHVRA---------QYQLALCLHRGRGVDFNLQEAAR 217
Q +N E +K Y A IA R Y L G G N +AA
Sbjct: 261 HRSLDQISNLGEDLKQHY-ADIAKDYRKAAEKHLAGFHYSLGRTFTNGIGTPQNHPKAAE 319
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLG 273
+ AAE G+ A +N Y G G+ + +A KW RAA+ G AQ + G
Sbjct: 320 KFRLAAEQGHANAQFNLGRIYEIGLGVDQDYSEALKWYIRAAEQGVADAQFNLAVMYANG 379
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
++++AV + A + G A + + +D A
Sbjct: 380 TGISQDLVEAVAWYHFAAKQGHPDAQYNLGFLYATGQGVEQDEA 423
>gi|294054544|ref|YP_003548202.1| Sel1 domain-containing protein repeat-containing protein
[Coraliomargarita akajimensis DSM 45221]
gi|293613877|gb|ADE54032.1| Sel1 domain protein repeat-containing protein [Coraliomargarita
akajimensis DSM 45221]
Length = 1129
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R G +++G G + KA FL A G+ LA MY
Sbjct: 760 IRLGLMYRYGYGPAVDRSKAEALFLPAAKNGNALAQYSLAWMY----------------- 802
Query: 165 VLGDPAAQPA--NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
PA + + + E+A + QA+ GH +AQ + G+G++ + +AA+WYL A
Sbjct: 803 --NSPADENSTPDYEQANEWFLQAAENGHTKAQLEYGYHCESGKGMEVDYVKAAKWYLAA 860
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
AE G A N L Y++ G+P ++A KW +AA + KA
Sbjct: 861 AEQGNAIAQTNLGLAYTYARGVPEDAKEATKWFLKAAKQNNAKA 904
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L +G + G+G+ + KA +L A +G+ +A + GL Y Y +
Sbjct: 834 LEYGYHCESGKGMEVDYVKAAKWYLAAAEQGNAIAQTNLGLAY-----------TYARGV 882
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
P +A+EA K +A+ + +A Y L G G++ + + A Y +AA+
Sbjct: 883 --------PEDAKEATKWFLKAAKQNNAKALYYLGWNYQLGDGIEQDGRAALDAYQQAAD 934
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQA 251
GGY A C+ +G G+ + QA
Sbjct: 935 GGYAWAQVMLGRCHEYGIGVKADYTQA 961
>gi|46309573|ref|NP_035474.1| protein sel-1 homolog 1 isoform b precursor [Mus musculus]
gi|4159995|gb|AAD05210.1| SELlL [Mus musculus]
gi|20073079|gb|AAH26816.1| Sel-1 suppressor of lin-12-like (C. elegans) [Mus musculus]
gi|74144524|dbj|BAE36100.1| unnamed protein product [Mus musculus]
Length = 740
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 333 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 392
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 393 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 452
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 453 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 512
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 513 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 549
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 208 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 267
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 268 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 327
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 328 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 387
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 388 ADMGNPVGQ--SGLGM 401
>gi|223935677|ref|ZP_03627593.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
gi|223895685|gb|EEF62130.1| Sel1 domain protein repeat-containing protein [bacterium Ellin514]
Length = 254
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLY 160
G ++ G+G +++ +A+ + A + + A G+ Y E+ + A +
Sbjct: 30 GICYQTGQGTQQDYVEAVKWLRRAAEQEDSAAQCYLGVCYQAGLGVPQELGQ---ATRWF 86
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R+AA GDPAAQ P N EA K + A+ G +AQ+ L + G+
Sbjct: 87 REAAEQGDPAAQFNLGVCYETGQGVPQNYAEAFKWYHAAAERGEPQAQFNLGVFYESGQV 146
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +EA +WYL +AE A N LCY G G+ + A KW +AA G AQ
Sbjct: 147 VPQDYEEAVKWYLASAEQETAPAQCNLGLCYQTGRGVEKNEAMAVKWFCKAARQGDKTAQ 206
Query: 268 LEHGLGLF 275
H LGL+
Sbjct: 207 --HNLGLY 212
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK L +A+ AQ L +C G GV L +A RW+ AAE G A +N +C
Sbjct: 45 EAVKWLRRAAEQEDSAAQCYLGVCYQAGLGVPQELGQATRWFREAAEQGDPAAQFNLGVC 104
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE-----LATR 292
Y G+G+P ++ +A KW AA+ G+ Q + LG+F E + Y E LA+
Sbjct: 105 YETGQGVPQNYAEAFKWYHAAAE--RGEPQAQFNLGVFYESGQVVPQDYEEAVKWYLASA 162
Query: 293 AGETAADHVK-NVILQQLSATSRDRAMLV 320
ETA + Q ++ AM V
Sbjct: 163 EQETAPAQCNLGLCYQTGRGVEKNEAMAV 191
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G ++ G GV + L +A F + A +G A + G+ Y E + A Y
Sbjct: 66 GVCYQAGLGVPQELGQATRWFREAAEQGDPAAQFNLGVCY-ETGQGVPQNYAEAFKWYHA 124
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+P AQ P + EEAVK ++ AQ L LC GRGV+
Sbjct: 125 AAERGEPQAQFNLGVFYESGQVVPQDYEEAVKWYLASAEQETAPAQCNLGLCYQTGRGVE 184
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
N A +W+ +AA G A +N L Y+
Sbjct: 185 KNEAMAVKWFCKAARQGDKTAQHNLGLYYA 214
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ +G +Q L +C G+G + EA +W RAAE A +CY G
Sbjct: 14 LKKAAESGDAASQCYLGICYQTGQGTQQDYVEAVKWLRRAAEQEDSAAQCYLGVCYQAGL 73
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
G+P QA +W + AA+ G AQ G+
Sbjct: 74 GVPQELGQATRWFREAAEQGDPAAQFNLGV 103
>gi|334144575|ref|YP_004537731.1| Sel1 domain-containing protein repeat-containing protein
[Thioalkalimicrobium cyclicum ALM1]
gi|333965486|gb|AEG32252.1| Sel1 domain protein repeat-containing protein [Thioalkalimicrobium
cyclicum ALM1]
Length = 364
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G V ++ ++A + + A +G T A G++Y D K+A I Y QAA
Sbjct: 85 YLNGLYVEQDYNQAAYWYEQAAEQGDTDAQFHLGVLYRSGLGVAQDYKQA-IYWYEQAAK 143
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD AQ + +AV QA+ G + AQ++L + G GV +L
Sbjct: 144 QGDADAQYFLGDSYLYGQGVTKDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGVKQDL 203
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ AA WY +AA+ GYVRA + + Y+ G G+ + QA W ++AA G AQ +GL
Sbjct: 204 KAAAYWYEQAAKQGYVRAQFILGVMYTDGLGVAEDYTQAVYWYEQAAKQGLFDAQ--YGL 261
Query: 273 G-LFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G ++ G + +A + + A + G+ + + V+ S +D
Sbjct: 262 GVMYINGTGVAQDYKQAFYWFKKAAKQGDAVSQNSLGVMYANGSGVKQD 310
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
V L QA+ G AQ++L + + G GV+ + +AA WY +AA+ G+ A ++ ++ Y
Sbjct: 27 VSALEQAAKQGDAEAQFELGVKYYVGSGVEQDYNQAAYWYEQAAKQGFADAQFSLAVMYL 86
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGE 295
G + + QA W ++AA+ G AQ G+ GL + +A+ + E A + G+
Sbjct: 87 NGLYVEQDYNQAAYWYEQAAEQGDTDAQFHLGVLYRSGLGVAQDYKQAIYWYEQAAKQGD 146
Query: 296 TAADH 300
A +
Sbjct: 147 ADAQY 151
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKE--AAISLYRQA 163
G + +G+GV K+ ++A+ + + A +G A G+MY E K++ AA Y QA
Sbjct: 154 GDSYLYGQGVTKDYNQAVFWYEQAAKQGRIYAQFRLGVMYGNGEGVKQDLKAAAYWYEQA 213
Query: 164 A---------VLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A +LG D + +AV QA+ G AQY L + G GV
Sbjct: 214 AKQGYVRAQFILGVMYTDGLGVAEDYTQAVYWYEQAAKQGLFDAQYGLGVMYINGTGVAQ 273
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ ++A W+ +AA+ G + + + Y+ G G+ + A KW ++ G+
Sbjct: 274 DYKQAFYWFKKAAKQGDAVSQNSLGVMYANGSGVKQDYVAAYKWFNISSANGN 326
>gi|329119677|ref|ZP_08248358.1| TPR repeat protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464274|gb|EGF10578.1| TPR repeat protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 527
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 27/195 (13%)
Query: 96 RPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---E 149
+PL E A R GK + GRGV ++ +A+ F K AA+G+ LA + G+MY+
Sbjct: 58 QPLAETGNAQAQARLGKAYYQGRGVLQDYAQAVQWFEKSAAQGNALAQNNLGVMYYYGHG 117
Query: 150 MDKKEA-AISLYRQAAVLGDPAAQ---PANAEEAVKLL---------YQASIAGHVRAQ- 195
+ K A ++ R+AA G P AQ A+ E+ + Y+ ++AG+ +A
Sbjct: 118 VAKDPAKSVQWMRKAAEQGLPQAQRNLGADYEDGFGVAKDPREAAKWYKKALAGYEKAAA 177
Query: 196 -------YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
+ LA+ GRGV+ + +++ W +AA GY A Y L Y G G+
Sbjct: 178 QGSAQAQFNLAMMYSGGRGVEKSDEKSFEWLEKAARQGYTEAEYALGLRYGLGRGVAKDD 237
Query: 249 RQARKWMKRAADCGH 263
QA W ++AA+ GH
Sbjct: 238 AQAAAWYRKAAEKGH 252
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+ G GV K+ +A + F K AA+G A + GLMY +L R
Sbjct: 260 GSRYLTGNGVAKDDKQAAEWFAKAAAKGDAFAQYNLGLMY----------NLGRGV---- 305
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGG 226
P + ++ LL +A+ G + AQY L +GR GV + ++A+ W +AAE G
Sbjct: 306 -----PQDRTRSIDLLTKAAEQGRLSAQYLLYSLYAQGRNGVPQDDKQASYWLAKAAEQG 360
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
RA YN ++ Y G G+ +A +W+K+AA
Sbjct: 361 DPRAEYNMAVRYRIGRGVEKDDAKAIEWLKKAA 393
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
++DK E A + R A +AV + + G+ +AQ +L ++GRGV
Sbjct: 37 QLDKAETAFNAGRDA--------------DAVAIWQPLAETGNAQAQARLGKAYYQGRGV 82
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 267
+ +A +W+ ++A G A N + Y +G G+ ++ +WM++AA+ G +AQ
Sbjct: 83 LQDYAQAVQWFEKSAAQGNALAQNNLGVMYYYGHGVAKDPAKSVQWMRKAAEQGLPQAQR 142
Query: 268 -----LEHGLGL 274
E G G+
Sbjct: 143 NLGADYEDGFGV 154
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKK 153
+A G + GRGV ++ +++D K A +G A +Y + D K
Sbjct: 288 DAFAQYNLGLMYNLGRGVPQDRTRSIDLLTKAAEQGRLSAQYLLYSLYAQGRNGVPQDDK 347
Query: 154 EAAISLYRQAAVLGDPAAQ----------------PANAEEAVKLLYQASIAGHVRAQYQ 197
+A+ L + AA GDP A+ A A E +K + V AQY
Sbjct: 348 QASYWLAK-AAEQGDPRAEYNMAVRYRIGRGVEKDDAKAIEWLKKAAAHETSASVLAQYD 406
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L +G GV + ++AA W +AA Y+ A + G G P + + ++
Sbjct: 407 LGSLYLKGEGVAQDDKQAAEWLEKAAGHDYIHAQKKLAALVITGTGTPQDTAKGMELLRA 466
Query: 258 AADCGHGKAQ----LEHGLGLFTEG-EMMKAVVYLELATRAGETAA 298
AA+ G +Q + + GLF G + +A V+LE A G A
Sbjct: 467 AAEQGDATSQTLLGMAYNTGLFGIGQDPAQARVWLEKAAAQGSKEA 512
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E++ + L +A+ G+ A+Y L L GRGV + +AA WY +AAE G+ A
Sbjct: 202 EKSFEWLEKAARQGYTEAEYALGLRYGLGRGVAKDDAQAAAWYRKAAEKGHTAAAGLLGS 261
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y G G+ +QA +W +AA G AQ GL
Sbjct: 262 RYLTGNGVAKDDKQAAEWFAKAAAKGDAFAQYNLGL 297
>gi|296106681|ref|YP_003618381.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|295648582|gb|ADG24429.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 342
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 21/223 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
E M G + G+GV ++ KA+ F K A + ++ ++ G+MY +
Sbjct: 76 EVMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAALQNDAVSQLNLGVMYQKGMGTQQNDRE 135
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI +AA G P A+ + N EA K L++A+ AQY LA+
Sbjct: 136 AIKWIHKAAAQGFPEAERSLGILYSIAENGQQNYVEAFKWLHKAAEKEDAIAQYNLAVMY 195
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+GV N EA +W+ +A + G + A L Y+ G + QA KW + AA G
Sbjct: 196 VTGKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMYATGSNVQQDDFQAMKWFRLAAKQG 255
Query: 263 HGKAQLEHGLGLFTEGEMM----KAVVYLELATRAGETAADHV 301
AQ G+G ++ KA+ + LA G A +V
Sbjct: 256 DAVAQYNIGMGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G+GVR+N +A+ F K G +A GLMY G Q
Sbjct: 198 GKGVRQNDTEAVKWFRKAGKHGDLMAQRTLGLMY-----------------ATGSNVQQ- 239
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +A+K A+ G AQY + + G+GV N +A +W+ AA G +A Y
Sbjct: 240 -DDFQAMKWFRLAAKQGDAVAQYNIGMGFLNGKGVIRNHTKALKWFHLAASQGLPQAQYV 298
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G LP + +A KW+++AA GH +AQ
Sbjct: 299 LAALYHDGVSLPQNSMEAIKWLRKAAAQGHLQAQ 332
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+G AQ N EAVK +A+ G V AQ L L G+GV + +A +W+ +AA
Sbjct: 52 VIGKRVAQ--NDSEAVKWFCKAAKQGEVMAQRNLGLMYAAGKGVPQDNGKAMQWFRKAAL 109
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ N + Y G G + R+A KW+ +AA G +A E LG+
Sbjct: 110 QNDAVSQLNLGVMYQKGMGTQQNDREAIKWIHKAAAQGFPEA--ERSLGIL 158
>gi|350270102|ref|YP_004881410.1| hypothetical protein OBV_17060, partial [Oscillibacter
valericigenes Sjm18-20]
gi|348594944|dbj|BAK98904.1| hypothetical protein OBV_17060 [Oscillibacter valericigenes
Sjm18-20]
Length = 969
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
GK ++ G GV+K+ +A + + A +G + VD G+ Y W ++K E A + A
Sbjct: 529 GKCYEFGYGVKKDYAQAAEHYHISAGQGYAPSQVDLGVFYENGWGVEKNLETAFHFHMMA 588
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G Q N EA++ ++ H RAQY L LC G GV+
Sbjct: 589 AKQGFAIGQCNVGYCYEAGTGIEINYAEALRWYRLSAEQRHARAQYHLGLCYEDGIGVEP 648
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA WY AAE GYV + + Y G G+ + +A KW AA G ++
Sbjct: 649 DFSEAMAWYQLAAEQGYVYSQRSMGRFYEKGLGVGQDYEEAIKWFSLAAKQGDDESMCT- 707
Query: 271 GLGLF 275
LG+F
Sbjct: 708 -LGIF 711
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
++AQ++LA+C + G GV + ++A W+ RAAE G+V A YN CY G G+ L +A
Sbjct: 54 LQAQHELAICYYTGDGVKQDYEQAVYWFSRAAEQGHVVAQYNLGSCYENGVGVDLDDEKA 113
Query: 252 RKWMKRAADCGHGKAQLEHG 271
+W + AA+ AQ +G
Sbjct: 114 VRWYQEAAEQNFAPAQCAYG 133
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ ++ G G N KAL+ + + A +GS A + G Y+ +G
Sbjct: 277 GECYEFGYGTEPNPQKALELYRQAAEQGSVPAQCNVGYCYY-----------------VG 319
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
A + + EEAVK A+ G+ RAQ L CL G GV+ +AA ++ AA GY
Sbjct: 320 VGAEE--DEEEAVKWFSLAAERGYARAQCLLGECLLNGHGVEKGPIKAAEYFGAAAGQGY 377
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+A +N C+ G G+ +AR+ +++A+ G+ AQ G
Sbjct: 378 PQAQFNLGWCFECGIGVEQDLEKARELYRQSAEHGYVPAQCNLG 421
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 104/251 (41%), Gaps = 70/251 (27%)
Query: 85 SLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKA---------LDS-------- 127
SL K +D E+M L G FKHGRGV+++ KA LD
Sbjct: 694 SLAAKQGDD------ESMCTL--GIFFKHGRGVQQDYQKAIWWYQQAVDLDCARAQTCLA 745
Query: 128 --FLKG-----------------AARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQA 163
+ KG A G A+ + ++Y D+ EA + LYR A
Sbjct: 746 IMYEKGLEVDRDYGEAARLYRLAADNGDMHAVYNLAVLYDYGRGMPQDQVEA-VRLYRIA 804
Query: 164 AVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A G P+A +++EA +L A+ G+ AQ L + G V+
Sbjct: 805 AEQGQPSALANLGYAYNHAEGGLEKDSQEAFRLYRLAAEKGNAVAQCNLGVMYKNGENVE 864
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG----- 264
+LQEA R Y AAE G + A+ N CY GEG+ + QA + ++A + GH
Sbjct: 865 RDLQEAVRLYRLAAEQGNLTALNNLGECYENGEGVEQDYAQAMQLYRQAFERGHAFAASS 924
Query: 265 -KAQLEHGLGL 274
A E GLG+
Sbjct: 925 IGALYEKGLGV 935
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G GV+++ ++A+ F + A +G +A + G Y ++D E A+ Y++AA
Sbjct: 64 YYTGDGVKQDYEQAVYWFSRAAEQGHVVAQYNLGSCYENGVGVDLDD-EKAVRWYQEAAE 122
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
AQ A + E+A L ++ G+ AQ L + G V+ +
Sbjct: 123 QNFAPAQCAYGWYMELGRGIKEDKEQAAHLYLLSAEQGYAPAQCNLGFFYYHGITVEVDN 182
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
QEA W+ +AE GY RA + CY +G G+ +A + + AA+ AQ GL
Sbjct: 183 QEAVHWFSESAERGYPRARFLLGECYDYGYGVQQDRAKAVELYRLAAEDDFAMAQSRLGL 242
Query: 273 GLFTEGEMMK 282
L+ GE+++
Sbjct: 243 -LYLRGEVLE 251
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
F+ G GV ++L+KA + + + A G A + G +Y+ + E A + AA
Sbjct: 388 FECGIGVEQDLEKARELYRQSAEHGYVPAQCNLGNLYYSGIGVEENNEEAAKWFALAAER 447
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
P AQ E+A++L ++ G+ AQ ++ + + G V+ +
Sbjct: 448 RYPRAQFLLGECFENGFGVEKGNEKALELYRLSAEQGYATAQNRVGVFYYHGIVVEQDYP 507
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
A +W+ RAAE G++ A ++ CY FG G+ + QA + +A G+ +Q++ LG
Sbjct: 508 AAMKWFERAAEQGFISARHSLGKCYEFGYGVKKDYAQAAEHYHISAGQGYAPSQVD--LG 565
Query: 274 LFTE 277
+F E
Sbjct: 566 VFYE 569
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 11/173 (6%)
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+ E AI Y GD Q + E+AV +A+ GHV AQY L C G GVD +
Sbjct: 57 QHELAICYY-----TGDGVKQ--DYEQAVYWFSRAAEQGHVVAQYNLGSCYENGVGVDLD 109
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
++A RWY AAE + A G G+ QA +A+ G+ AQ G
Sbjct: 110 DEKAVRWYQEAAEQNFAPAQCAYGWYMELGRGIKEDKEQAAHLYLLSAEQGYAPAQCNLG 169
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G+ E + +AV + + G A + +DRA V
Sbjct: 170 FFYYHGITVEVDNQEAVHWFSESAERGYPRARFLLGECYDYGYGVQQDRAKAV 222
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+ ++ G GV ++ ++A+ F A +G +M G+ + + AI Y+QA
Sbjct: 673 GRFYEKGLGVGQDYEEAIKWFSLAAKQGDDESMCTLGIFFKHGRGVQQDYQKAIWWYQQA 732
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
L D A RAQ LA+ +G VD + EAAR Y AA
Sbjct: 733 VDL-DCA----------------------RAQTCLAIMYEKGLEVDRDYGEAARLYRLAA 769
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ G + A+YN ++ Y +G G+P +A + + AA+ G A
Sbjct: 770 DNGDMHAVYNLAVLYDYGRGMPQDQVEAVRLYRIAAEQGQPSA 812
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYR 161
+G + GRG++++ ++A +L A +G A + G Y+ E+D +EA + +
Sbjct: 132 YGWYMELGRGIKEDKEQAAHLYLLSAEQGYAPAQCNLGFFYYHGITVEVDNQEA-VHWFS 190
Query: 162 QAAVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
++A G P A+ E +AV+L A+ AQ +L L RG +
Sbjct: 191 ESAERGYPRARFLLGECYDYGYGVQQDRAKAVELYRLAAEDDFAMAQSRLGLLYLRGEVL 250
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + ++A W+ + AE A CY FG G + ++A + ++AA+ G AQ
Sbjct: 251 EQSDEQAFLWFSKGAEQEEPSAQCLLGECYEFGYGTEPNPQKALELYRQAAEQGSVPAQC 310
Query: 269 EHG----LGLFTEGEMMKAVVYLELATRAG 294
G +G+ E + +AV + LA G
Sbjct: 311 NVGYCYYVGVGAEEDEEEAVKWFSLAAERG 340
>gi|336453020|ref|YP_004607486.1| hypothetical protein HBZC1_07880 [Helicobacter bizzozeronii CIII-1]
gi|335333047|emb|CCB79774.1| hypothetical protein HBZC1_07880 [Helicobacter bizzozeronii CIII-1]
Length = 572
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKE 154
++A L G + +G+ K+ KAL+ F + A G A + G +Y E E
Sbjct: 338 QKAQELYNLGVVYSSDQGIAKDEQKALEYFTQAAKLGHAKAYYNLGTIYSEGLGVPKDLE 397
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A S +++AA LGD A P N +A+ +A+ + A + L
Sbjct: 398 QAFSCFQEAAKLGDDKAYYNLGLMCEYARGVPQNIPQALFFYEEAAKLENTSALHHLGSL 457
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
H G+ V ++++A ++ +AA+ G +R YN + YS G+G+ +QA + ++AAD
Sbjct: 458 YHVGKIVPKDMEKAFAYFYKAAQLGSIRDCYNLGVMYSKGDGVQKDIQQALSYFEKAADL 517
Query: 262 GHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAA 298
G A G+ ++ +GE + KA+ Y + + + G A
Sbjct: 518 GSSNALYNLGI-IYYQGEGVEKDLEKAISYFQRSCKLGNKKA 558
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM----------- 146
L A G + G GV K+L++A F + A G A + GLM
Sbjct: 373 LGHAKAYYNLGTIYSEGLGVPKDLEQAFSCFQEAAKLGDDKAYYNLGLMCEYARGVPQNI 432
Query: 147 ------YWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
Y E K E +L+ ++ P + E+A Y+A+ G +R Y L +
Sbjct: 433 PQALFFYEEAAKLENTSALHHLGSLYHVGKIVPKDMEKAFAYFYKAAQLGSIRDCYNLGV 492
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+G GV ++Q+A ++ +AA+ G A+YN + Y GEG+ +A + +R+
Sbjct: 493 MYSKGDGVQKDIQQALSYFEKAADLGSSNALYNLGIIYYQGEGVEKDLEKAISYFQRSCK 552
Query: 261 CGHGKAQ 267
G+ KAQ
Sbjct: 553 LGNKKAQ 559
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 23/201 (11%)
Query: 89 KSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
+ + +AL+ +A L+ G + +GRGV ++ +AL+ F + A G + V+
Sbjct: 52 RDYAEALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVN 111
Query: 143 AGLMY--WEMDKKE--AAISLYRQAAVLGDPAA-------------QPANAEEAVKLLYQ 185
G+MY + KK+ A+ ++Q A D A N ++A++L Q
Sbjct: 112 LGVMYNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGKGVGVNYQKALELYEQ 171
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G VR L + G GV N +A ++ RAA+ G RA YN ++ GEG+
Sbjct: 172 AANLGSVRVLVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAYYNLAIMCEGGEGMD 231
Query: 246 LSHRQARKWMKRAADCGHGKA 266
Q+R++ K +A G KA
Sbjct: 232 KDTEQSREFFKESARLGFTKA 252
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVLGDPA-------- 170
+AL ++ + A GS+ A+V G+MY + + +A A++ ++QAA LGD
Sbjct: 56 EALKNYEQAADLGSSRALVGLGVMYANGRGVSQDDARALNYFQQAANLGDSQGFVNLGVM 115
Query: 171 -----AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+ ++A+ Q + V A +AL G+GV N Q+A Y +AA
Sbjct: 116 YNLGKGIKKDYQKALDFFKQGAEFNDVNAINYMALMYRTGKGVGVNYQKALELYEQAANL 175
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
G VR + + + G G+ ++ QA ++ KRAAD G +A + L + EG
Sbjct: 176 GSVRVLVSLGTMHYNGHGVAKNYPQAIEYFKRAADMGDARAY--YNLAIMCEG 226
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 17/173 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
++ G+GV N KAL+ + + A GS +V G M++ AI +++AA +
Sbjct: 152 YRTGKGVGVNYQKALELYEQAANLGSVRVLVSLGTMHYNGHGVAKNYPQAIEYFKRAADM 211
Query: 167 GDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD A + E++ + +++ G +A Y LA G GVD +L
Sbjct: 212 GDARAYYNLAIMCEGGEGMDKDTEQSREFFKESARLGFTKATYTLASMYESGDGVDKDLD 271
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A Y A G A+ + + Y G+G+ A + K AAD G +A
Sbjct: 272 KAIELYQEAGNMGDADALASLANLYRVGKGVEQDKYTAIAYYKEAADLGDSQA 324
>gi|421596302|ref|ZP_16040153.1| hypothetical protein BCCGELA001_04002, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404271588|gb|EJZ35417.1| hypothetical protein BCCGELA001_04002, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +EA K +A+ AG V A ++L +G GV + A R+Y +AAE G +AM+N
Sbjct: 114 NYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADIARRYYTQAAERGNAKAMHNL 173
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
++ + G G +++ A +W ++AAD G +Q G+ G+ E + ++ + LA
Sbjct: 174 AVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKWFSLA 233
Query: 291 TRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
G+T A ++ + ++L + S A L + ++ A P
Sbjct: 234 AAQGDTDASGKRDDVAKRLDSQSLAAAKLAIQTFSAEP 271
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKKEAAI 157
+A G RF G+GV N D+A + + A G A G +Y + KK+A I
Sbjct: 94 DATAAYEIGMRFAEGKGVATNYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADI 153
Query: 158 S--LYRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+ Y QAA G D + AN + A + +A+ G +Q+ L +
Sbjct: 154 ARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILY 213
Query: 203 HRGRGVDFNLQEAARWY-LRAAEG 225
RG GV+ NL E+ +W+ L AA+G
Sbjct: 214 ARGIGVEQNLAESYKWFSLAAAQG 237
>gi|328544856|ref|YP_004304965.1| Sel1-like repeat protein [Polymorphum gilvum SL003B-26A1]
gi|326414598|gb|ADZ71661.1| Sel1 repeat family [Polymorphum gilvum SL003B-26A1]
Length = 1345
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 27/187 (14%)
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R AA G+PAA+ A+ EA K +A++ G AQY+LA +GRG
Sbjct: 1071 RSAAASGNPAAEFQVAVNYTEGRGVAADLSEAAKWYERAALQGLAPAQYRLASLYEKGRG 1130
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKA 266
V +L +A WY RAA+ G +AM+N ++ ++ G +G P QA +W AAD G +
Sbjct: 1131 VTKDLAKAREWYTRAAQAGNAKAMHNLAVLHAEGADGQP-DFEQAARWFTAAADYGIPDS 1189
Query: 267 QLEHGL----GLFTEGEMMKAVVYLELATRAGETAA----DHVKNVILQQLSATSRDRAM 318
G+ GL ++ ++ + +A R G+ A D V N++ + A +R
Sbjct: 1190 LFNLGILHARGLGVTKDLGESYKWFAVAARQGDRDAAKKRDEVANMLDKDQLAAAR---- 1245
Query: 319 LVVDSWR 325
L VDS++
Sbjct: 1246 LAVDSFK 1252
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 164 AVLGDPAAQPANAEEAVKL---------LYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A L PAA PA + L L A+ +G+ A++Q+A+ GRGV +L E
Sbjct: 1042 APLDPPAAGPAGGDVIAGLPPEEIGPMALRSAAASGNPAAEFQVAVNYTEGRGVAADLSE 1101
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA+WY RAA G A Y + Y G G+ +AR+W RAA G+ KA H L +
Sbjct: 1102 AAKWYERAALQGLAPAQYRLASLYEKGRGVTKDLAKAREWYTRAAQAGNAKAM--HNLAV 1159
Query: 275 F 275
Sbjct: 1160 L 1160
>gi|168334093|ref|ZP_02692306.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 349
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 23/190 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQA 163
G +++G G +KNL KA++ + K A +G+ AM D Y +DK A A++ +RQA
Sbjct: 129 GFCYQYGEGTKKNLTKAVEWYTKAAKQGNLPAMNDLAKCYKLGSGVDKDLAVALNYFRQA 188
Query: 164 AVLGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+P AQ A ++V+ A+ + AQ + + G GV
Sbjct: 189 ANHGNPDAQLNLAICYYEGSGVARSLHKSVEYCTMAAEQNNADAQLMMGMFYSMGEGVTE 248
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--- 267
NL A W+ AA+ A + + CY +G G+ R+A ++ +RAA+ H +AQ
Sbjct: 249 NLFTATLWFRAAADHNQPDATFQLANCYQYGLGVEQDSRKAAEYFERAANLNHPEAQYII 308
Query: 268 ---LEHGLGL 274
E+G+ +
Sbjct: 309 GQYYEYGISV 318
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAIS 158
A L G+ +++G G RKN+ +A D + K A +G + A + G Y E KK
Sbjct: 86 APALANLGECYEYGIGTRKNMFRAFDCYNKAAIKGISDAQYNVGFCYQYGEGTKK----- 140
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
N +AV+ +A+ G++ A LA C G GVD +L A +
Sbjct: 141 ----------------NLTKAVEWYTKAAKQGNLPAMNDLAKCYKLGSGVDKDLAVALNY 184
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AA G A N ++CY G G+ S ++ ++ AA+ + AQL G+ ++ G
Sbjct: 185 FRQAANHGNPDAQLNLAICYYEGSGVARSLHKSVEYCTMAAEQNNADAQLMMGM-FYSMG 243
Query: 279 EMMKAVVYLELATRAGETAADH 300
E + ++ AT AADH
Sbjct: 244 EGVTENLF--TATLWFRAAADH 263
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +++G G+ ++ +A + K A + A+ + G Y E I +
Sbjct: 57 GECYEYGFGIDEDTSEAFKWYQKSATQSYAPALANLGECY------EYGIGTRK------ 104
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N A +A+I G AQY + C G G NL +A WY +AA+ G
Sbjct: 105 -------NMFRAFDCYNKAAIKGISDAQYNVGFCYQYGEGTKKNLTKAVEWYTKAAKQGN 157
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
+ AM + + CY G G+ A + ++AA+ G+ AQL + + EG + K
Sbjct: 158 LPAMNDLAKCYKLGSGVDKDLAVALNYFRQAANHGNPDAQLNLAI-CYYEGSGVARSLHK 216
Query: 283 AVVYLELA 290
+V Y +A
Sbjct: 217 SVEYCTMA 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
AE A + + +I G +Q + C G G+D + EA +WY ++A Y A+ N
Sbjct: 34 AENAFAEVMELAIKGDPESQNNIGECYEYGFGIDEDTSEAFKWYQKSATQSYAPALANLG 93
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADC-------GHGKAQLEHGL----GLFTEGEMMKAV 284
CY +G G RK M RA DC G AQ G G T+ + KAV
Sbjct: 94 ECYEYGIG-------TRKNMFRAFDCYNKAAIKGISDAQYNVGFCYQYGEGTKKNLTKAV 146
Query: 285 VYLELATRAGETAA 298
+ A + G A
Sbjct: 147 EWYTKAAKQGNLPA 160
>gi|302879040|ref|YP_003847604.1| Sel1 domain-containing protein repeat-containing protein
[Gallionella capsiferriformans ES-2]
gi|302581829|gb|ADL55840.1| Sel1 domain protein repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 328
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 132 AARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ-------------P 173
A++G +A + G+MY + D K AA YR AAV G+ +AQ P
Sbjct: 49 ASQGDAVAQDNIGVMYDNGQGVQQDYKIAA-KWYRLAAVQGNASAQANLGMIYEHGEGVP 107
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +EA++ A+ G AQ L +G+G+ + +EA +WY AA+ G A N
Sbjct: 108 KDYKEAIRWYRLAAGQGDAVAQGNLGRIYAKGQGIPLDYKEAVKWYRLAADQGVDTAQQN 167
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLE 288
Y FG+G+ +++A KW + AA G +Q G+ ++ +G + M+A+ +
Sbjct: 168 LGNAYLFGKGVAQDYKEAAKWFQLAAKQGIASSQYNLGV-MYRDGRGVLQDYMEAIAWFL 226
Query: 289 LATRAGETAADH 300
+A G+ +A H
Sbjct: 227 VAADQGDASAQH 238
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++HG GV K+ +A+ + A +G +A + G +Y + +D KEA + YR
Sbjct: 97 GMIYEHGEGVPKDYKEAIRWYRLAAGQGDAVAQGNLGRIYAKGQGIPLDYKEA-VKWYRL 155
Query: 163 AAVLGDPAAQP--ANA-----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ NA +EA K A+ G +QY L + GRGV
Sbjct: 156 AADQGVDTAQQNLGNAYLFGKGVAQDYKEAAKWFQLAAKQGIASSQYNLGVMYRDGRGVL 215
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+ EA W+L AA+ G A +N Y+ G+G+
Sbjct: 216 QDYMEAIAWFLVAADQGDASAQHNLGAMYASGQGV 250
>gi|425701990|gb|AFX93152.1| putative Sel1-like repeat-containing protein [Megavirus courdo11]
Length = 570
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+ KA + A +G + A + G Y++ DK E AI ++++ G
Sbjct: 112 GFMYEENIGITGKTKKAKKWYALSANQGLSFAQYNLGYYYFKKDKYEKAIDCFQKSMQSG 171
Query: 168 DPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+ N +EA+KL ++ G++ +QY+L + + G + N+ EA
Sbjct: 172 CYVSNYMLAETYLKLSVPNHDEAIKLFTISANKGYIYSQYRLGILYYDGIHIPININEAI 231
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG--- 273
+W+L AA G + + Y G+ + + QA KW K +A G+ A E+GLG
Sbjct: 232 KWFLMAANQGCDMSQNKLGVIYFEGKYINVDMNQAYKWFKLSAKQGNYFA--EYGLGRVY 289
Query: 274 ---LFTEGEMMKAV 284
FT+ KA+
Sbjct: 290 DSKYFTKYNCQKAI 303
>gi|345329031|ref|XP_001515142.2| PREDICTED: protein sel-1 homolog 2-like [Ornithorhynchus anatinus]
Length = 900
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+G+ ++ KAL FLK A GST AM G+MY E + AA P
Sbjct: 365 KGLEQDFYKALYYFLKAAKAGSTNAMAFLGMMYLEGN------------------AAAPQ 406
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N A K A+ G+ Y L L G+G+ N EA +++ +AAE G+ A +
Sbjct: 407 NNATAFKYFSMAANKGNAIGFYGLGLLYFHGKGIPVNYVEAFKYFQKAAEKGWPNAQFQL 466
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 294
Y FG G+ ++ A K+ A+ G L ++ GEM + + + R+
Sbjct: 467 GFMYYFGLGVWKDYKLAFKYFYLASQSG-------QPLAIYYLGEMYASGIGV---LRSC 516
Query: 295 ETAADHVKNV 304
+TA + K V
Sbjct: 517 QTAVEFYKGV 526
>gi|237748051|ref|ZP_04578531.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379413|gb|EEO29504.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 511
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
AM L + G GVRKN +A + + K A + A G +Y + ++ KE
Sbjct: 139 NAMAQLYVAYMLEKGLGVRKNDREAFNWYKKAAEQNVPNAQYKLGTLYEKGIGTRINLKE 198
Query: 155 AAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALC 201
A ++ YR+AA G AQ + EA + Y A+ G V AQ LA
Sbjct: 199 A-LNWYRKAAEGGLSGAQVKLGRLYSEGIGVKRDYTEAARWFYPAAEKGDVMAQTALAFL 257
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV + A WY +AAE G+ A N Y G G+ + ARKW + AA
Sbjct: 258 FENGLGVQQDDAFAISWYSKAAEKGFAPAQNNLGYLYDNGIGVLRDYTTARKWYEAAAKQ 317
Query: 262 GHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 298
G+ +AQ G LG T + KA +LE A G A
Sbjct: 318 GNVEAQFNLGQLYTLGHGTVQDYGKAAEWLEKAAAKGHPKA 358
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 37/188 (19%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA------MVDAGLMYWEMDK 152
++ +V G F G GV N +KA D +LK A + + +A M++ GL + D+
Sbjct: 102 KDPLVQSALGNMFSMGLGVDVNQEKAFDWYLKAAKQNNAMAQLYVAYMLEKGLGVRKNDR 161
Query: 153 KEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+ A + Y++AA P AQY+L +G G NL
Sbjct: 162 E--AFNWYKKAAEQNVP-----------------------NAQYKLGTLYEKGIGTRINL 196
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----- 267
+EA WY +AAEGG A YS G G+ + +A +W AA+ G AQ
Sbjct: 197 KEALNWYRKAAEGGLSGAQVKLGRLYSEGIGVKRDYTEAARWFYPAAEKGDVMAQTALAF 256
Query: 268 -LEHGLGL 274
E+GLG+
Sbjct: 257 LFENGLGV 264
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLY 160
++ G+ + G GV+++ +A F A +G +A ++ + + +A AIS Y
Sbjct: 216 VKLGRLYSEGIGVKRDYTEAARWFYPAAEKGDVMAQTALAFLFENGLGVQQDDAFAISWY 275
Query: 161 RQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+AA G AQ + A K A+ G+V AQ+ L G G
Sbjct: 276 SKAAEKGFAPAQNNLGYLYDNGIGVLRDYTTARKWYEAAAKQGNVEAQFNLGQLYTLGHG 335
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ +AA W +AA G+ +A+ N + G G+P+ +A ++ ++AA G+ AQ
Sbjct: 336 TVQDYGKAAEWLEKAAAKGHPKALNNLGMASLDGMGVPMDRVKAGEYFRKAALLGNAHAQ 395
>gi|157962656|ref|YP_001502690.1| Sel1 domain-containing protein [Shewanella pealeana ATCC 700345]
gi|157847656|gb|ABV88155.1| Sel1 domain protein repeat-containing protein [Shewanella pealeana
ATCC 700345]
Length = 380
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 20/219 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMD---KKEAAISLYRQA 163
G + +G G+ +N +A+ + K A +G A G +Y + +D ++ A+ Y A
Sbjct: 85 GTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLA 144
Query: 164 AVLGDPAAQPA----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A A A + EA+ + +A+ G AQY LA L+ G G + N Q
Sbjct: 145 AEQNHVDALYAIGMIFHSTKEDYPEAIYWIKKAADKGLDEAQYDLARMLYFGVGTEENKQ 204
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-- 271
+A WYL+AAE G+V A + Y F +G+ + A W ++AA+ G+ KAQ G
Sbjct: 205 QAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKTNAFVWYQKAANEGYAKAQFHLGSM 264
Query: 272 --LGLFTEGEMMKAV-VYLELATRAGETAADHVKNVILQ 307
LG T KA+ YL+ A + G A H V+ +
Sbjct: 265 YELGEGTTVNKAKAIRCYLKAAEQ-GLPDAQHNLGVMFE 302
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A++L +A+ G AQY L G V N QEA +WY +AAE G A Y Y
Sbjct: 29 AIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADAQYTLGTIY 88
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+G G+P + ++A KW ++AA+ G AQ G
Sbjct: 89 DYGMGIPENRQEAIKWYRKAAEQGVADAQYTLG 121
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
AI L+R+AA G AQ P N +EA+K +A+ G AQY L
Sbjct: 29 AIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADAQYTLGTIY 88
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G G+ N QEA +WY +AAE G A Y Y +G + + ++A W AA+
Sbjct: 89 DYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLAAEQN 148
Query: 263 HGKAQLEHGLGLFTEGEMMKAVVY 286
H A G+ + E +Y
Sbjct: 149 HVDALYAIGMIFHSTKEDYPEAIY 172
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 68/170 (40%), Gaps = 17/170 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDP 169
G G +N +A +LK A +G A G Y + K A Y++AA G
Sbjct: 196 GVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKTNAFVWYQKAANEGYA 255
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ N +A++ +A+ G AQ+ L + G GV N+ EA
Sbjct: 256 KAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVMFELGDGVVKNMPEAI 315
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WY AA+ G + Y Y + P + A W + AA GH KA
Sbjct: 316 TWYTAAAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAALGHQKA 365
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L C+ R + + A + +AAE G A Y Y +G +P++ ++A KW ++
Sbjct: 12 LGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRK 71
Query: 258 AADCGHGKAQ------LEHGLGL 274
AA+ G AQ ++G+G+
Sbjct: 72 AAEQGVADAQYTLGTIYDYGMGI 94
>gi|268608125|ref|ZP_06141852.1| hypothetical protein RflaF_01309 [Ruminococcus flavefaciens FD-1]
Length = 520
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 114 GRGVRKNLDKA---------------LDSFLKGAARGSTLAMVDAGLMYW-----EMDKK 153
G G++KN+D A +D + A GS A G +YW D
Sbjct: 228 GTGLKKNIDTAEKLSERYGIPLSVSEIDELTEKAKSGSADAQFRLGNIYWLGSGTAADHA 287
Query: 154 EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
EA + Y+ AA GDP A P + +A +L +A++ G A LA
Sbjct: 288 EA-VKWYKMAADNGDPNAIYSLACCYYKGDGIPCDQSKAAELFMKAALQGDRDALNNLAK 346
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
C G GV + +AA ++ +AAE G+ A YN + C+ G G +++++A W K+AA+
Sbjct: 347 CYFMGEGVTRSRSKAAGYFRKAAESGHTAAQYNLAECFFHGWGEDVNYKKAIMWYKKAAE 406
Query: 261 CGHGKAQLEHG 271
+AQ +G
Sbjct: 407 QSMPEAQYSYG 417
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWEMDKKEAAISL--YRQA 163
G+RF +GRGV+++ +KA+ + + + RG S+ + L + ++ A++ Y QA
Sbjct: 149 GERFYYGRGVKQDYEKAVYWYTQSSDRGDCSSQKKLAECLRLGQGAPQDCALAAKRYTQA 208
Query: 164 AVLGDPAAQPA--------------NAEEAVKL---------------LYQASIAGHVRA 194
A GD +Q A N + A KL L + + +G A
Sbjct: 209 AEQGDYDSQKALILLYQNGGTGLKKNIDTAEKLSERYGIPLSVSEIDELTEKAKSGSADA 268
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
Q++L G G + EA +WY AA+ G A+Y+ + CY G+G+P +A +
Sbjct: 269 QFRLGNIYWLGSGTAADHAEAVKWYKMAADNGDPNAIYSLACCYYKGDGIPCDQSKAAEL 328
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
+AA G A L + + GE + KA Y A +G TAA +
Sbjct: 329 FMKAALQGDRDA-LNNLAKCYFMGEGVTRSRSKAAGYFRKAAESGHTAAQY 378
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 80 QLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLA 139
Q +AA L K+ AL+ R+A+ L K + G GV ++ KA F K A G T A
Sbjct: 322 QSKAAELFMKA---ALQGDRDALNNL--AKCYFMGEGVTRSRSKAAGYFRKAAESGHTAA 376
Query: 140 MVDAGLMY---WEMD-KKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKL 182
+ + W D + AI Y++AA P AQ + + EA ++
Sbjct: 377 QYNLAECFFHGWGEDVNYKKAIMWYKKAAEQSMPEAQYSYGWCCLNGLGIQRDLCEAKRM 436
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
A+ + A+ L C G G NL A W+ +AA G A +CY +G
Sbjct: 437 FEAAASQNYTPAKKMLGYCWMNGMGTAKNLTTAVEWFGKAANRGDAEAAEMMVVCYKYG- 495
Query: 243 GLPLSHRQAR 252
G L +A+
Sbjct: 496 GEYLEKNEAK 505
>gi|228471789|ref|ZP_04056562.1| sell protein, repeat-containing domain [Capnocytophaga gingivalis
ATCC 33624]
gi|228276942|gb|EEK15637.1| sell protein, repeat-containing domain [Capnocytophaga gingivalis
ATCC 33624]
Length = 368
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 72 IAASFTLPQL-RAASLVCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKA 124
I A F+L QL V K + +A++ R+A M + +K+G GV K+ +A
Sbjct: 137 IEAQFSLGQLYEEGKDVSKDYAEAVKWYRKAAEQGNPMAQSSLAEMYKNGIGVSKDYTEA 196
Query: 125 LDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVLGDPAAQ------ 172
+ + K A +G A G +Y+ ++ EA + YR+AA G Q
Sbjct: 197 VKWYRKAAEQGYAKAQNHLGDLYYLGYGIVSVNYTEA-VKWYRKAAEQGQEQGQFNLGKM 255
Query: 173 -------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAE 224
+ E +K +A+ G+V + + + G G + EA +WY +AAE
Sbjct: 256 YIEGKGVKKDFLEGIKWYKKAAEQGNVNTLIHIGMMYYEGLDGAKRDYTEAIKWYQKAAE 315
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
GY RA Y Y GEG+ +A KW ++AA GH
Sbjct: 316 QGYARAQYKVGDMYEKGEGVSKDVAEAIKWYRKAAKQGH 354
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
++ +GV K++ +A+ + A +G A G +Y E + K A A+ YR+AA
Sbjct: 111 YEGAKGVPKDIAEAIKWCRRLAEQGHIEAQFSLGQLYEEGKDVSKDYAEAVKWYRKAAEQ 170
Query: 167 GDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNL 212
G+P AQ + AE EAVK +A+ G+ +AQ L + G G V N
Sbjct: 171 GNPMAQSSLAEMYKNGIGVSKDYTEAVKWYRKAAEQGYAKAQNHLGDLYYLGYGIVSVNY 230
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EA +WY +AAE G + +N Y G+G+ + KW K+AA+ G+ + G+
Sbjct: 231 TEAVKWYRKAAEQGQEQGQFNLGKMYIEGKGVKKDFLEGIKWYKKAAEQGNVNTLIHIGM 290
Query: 273 GLFTEG------EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
++ EG + +A+ + + A G A + + ++ S+D A +
Sbjct: 291 -MYYEGLDGAKRDYTEAIKWYQKAAEQGYARAQYKVGDMYEKGEGVSKDVAEAI 343
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 140 MVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ--------------PANAEEAVKLLYQ 185
M G Y + A+ Y++AA G AQ P + EA+K +
Sbjct: 71 MFKKGEEYEDTSDYAKAVKWYQKAAEKGHIEAQSALIEIYYEGAKGVPKDIAEAIKWCRR 130
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
+ GH+ AQ+ L G+ V + EA +WY +AAE G A + + Y G G+
Sbjct: 131 LAEQGHIEAQFSLGQLYEEGKDVSKDYAEAVKWYRKAAEQGNPMAQSSLAEMYKNGIGVS 190
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
+ +A KW ++AA+ G+ KAQ H L+ G + +V Y E
Sbjct: 191 KDYTEAVKWYRKAAEQGYAKAQ-NHLGDLYYLGYGIVSVNYTE 232
>gi|432465751|ref|ZP_19707842.1| hypothetical protein A15K_01689 [Escherichia coli KTE205]
gi|433072872|ref|ZP_20259538.1| hypothetical protein WIS_01828 [Escherichia coli KTE129]
gi|433120302|ref|ZP_20305981.1| hypothetical protein WKC_01726 [Escherichia coli KTE157]
gi|433183321|ref|ZP_20367587.1| hypothetical protein WGO_01760 [Escherichia coli KTE85]
gi|430994232|gb|ELD10563.1| hypothetical protein A15K_01689 [Escherichia coli KTE205]
gi|431589435|gb|ELI60650.1| hypothetical protein WIS_01828 [Escherichia coli KTE129]
gi|431644060|gb|ELJ11747.1| hypothetical protein WKC_01726 [Escherichia coli KTE157]
gi|431708211|gb|ELJ72735.1| hypothetical protein WGO_01760 [Escherichia coli KTE85]
Length = 647
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 267
+ +A RW+L++AE GY+ A Y+T+ YS E + +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 346
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 347 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 391
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 392 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 439
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSTEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|52841586|ref|YP_095385.1| hypothetical protein lpg1356 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777221|ref|YP_005185658.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52628697|gb|AAU27438.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508035|gb|AEW51559.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 376
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G +Q + EA K +A+ G+ AQ + L G GV + +A W
Sbjct: 95 ------DTGKGVSQ--DFTEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFNW 146
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LGL G
Sbjct: 147 FKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLGLLYTG 204
Query: 279 E 279
+
Sbjct: 205 Q 205
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA +A+ + AQ L G+GV + EA +WY++AAE G A N
Sbjct: 67 NYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFTEAFKWYMKAAEQGNPIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ KA + + A
Sbjct: 127 GLMYATGDGVAASDDKAFNWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKA 186
Query: 291 TRAGETAADH 300
G+ ++
Sbjct: 187 AEQGDEKGEY 196
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W A+ L G + G+GV ++ +A ++K A +G+ +A + GLMY
Sbjct: 71 ARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFTEAFKWYMKAAEQGNPIAQRNIGLMY 130
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
GD A A+ ++A +A+ G+ +AQ L G+G
Sbjct: 131 -----------------ATGDGVA--ASDDKAFNWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA 266
++++A WY +AAE G + Y+ L Y+ E G+ + A W +AA+ GH A
Sbjct: 172 TPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGIGADDKAAFYWFSQAANHGHVNA 231
Query: 267 Q 267
Q
Sbjct: 232 Q 232
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA + F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFNWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD + A+ + A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGIGADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH--GKA 266
D + +AA WY AAE G A G G+ ++QA W ++A G+ G+A
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPIGQA 305
Query: 267 QLEHGL--GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 304
+L + GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
++G A + + A L QA+ G+ A Y L G GV N +EA WY +AA+
Sbjct: 21 LVGFAAFENGDYTTAYPHLMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAAD 80
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
A + Y G+G+ +A KW +AA+ G+ AQ GL ++ G+ + A
Sbjct: 81 KNNALAQLSLGFMYDTGKGVSQDFTEAFKWYMKAAEQGNPIAQRNIGL-MYATGDGVAA 138
>gi|145637537|ref|ZP_01793194.1| hypothetical protein CGSHiHH_04215 [Haemophilus influenzae PittHH]
gi|145269223|gb|EDK09169.1| hypothetical protein CGSHiHH_04215 [Haemophilus influenzae PittHH]
Length = 255
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + +N + A KL + G+ +AQY L + GRGV + +A WY +AAE G
Sbjct: 36 GLTAYEQSNYQTAFKLWLPLAEQGNAKAQYNLGVMYGNGRGVKQDYFKAVNWYRKAAEQG 95
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y +A +N Y+ G G+ +A W ++AA+ GH AQ G+ ++ +G+ +K
Sbjct: 96 YAKAQFNLGNMYANGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGV-MYDKGQGVK 150
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+++ KA++ + K A +G A + G MY
Sbjct: 68 GVMYGNGRGVKQDYFKAVNWYRKAAEQGYAKAQFNLGNMY-------------------A 108
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + EAV +A+ GH AQ+ L + +G+GV + EA +WY +AAE GY
Sbjct: 109 NGRGVKQDDFEAVNWFRKAAEQGHANAQFNLGVMYDKGQGVKQDDFEAVKWYRKAAEQGY 168
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A Y G G+ +A KW ++AA+ G AQ
Sbjct: 169 AKAQGGLGAMYQSGRGVKQDDVEAVKWFRKAAEQGAANAQ 208
>gi|300995889|ref|ZP_07181299.1| Sel1 repeat protein, partial [Escherichia coli MS 200-1]
gi|300304677|gb|EFJ59197.1| Sel1 repeat protein [Escherichia coli MS 200-1]
Length = 475
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 157 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 216
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + E+A K +++ G+ AQY LA GRGVD
Sbjct: 217 ANKNHPLAQHSLACMYRDGEGVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 276
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 277 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 336
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 337 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 380
>gi|432583903|ref|ZP_19820303.1| hypothetical protein A1SM_03124 [Escherichia coli KTE57]
gi|431116553|gb|ELE19996.1| hypothetical protein A1SM_03124 [Escherichia coli KTE57]
Length = 647
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A+ G+MY + + I R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH AQY+L +G GV+
Sbjct: 391 AQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVER 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQ 267
+ +A RW+L++AE GY+ A Y+T+ YS E + +A W +AA G G A
Sbjct: 451 DEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 66 FD--VLNKIAASFTLPQLRAASLV-CKSWNDALRPLREAMVLLRW--GKRF-----KHGR 115
FD VLNK+A F L A L+ C S++ LR+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVA-EFELSDNYMALLIECLSYS-----LRKEKMIRKWKLTERFNNLAMQHHS 290
Query: 116 GVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 291 GYKKLLNAIKLKGLFYYPSSVYQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL---- 346
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +A+ + A Y L + GRG D N+ EA +W+L AA
Sbjct: 347 ---------------AFNWFTRAAQHNVIDALYALGIMYSDGRGTDKNICEARKWFLLAA 391
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ G A Y + F ++ +A +W AA GH AQ E G
Sbjct: 392 QNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHEVAQYELG 439
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR L+W G+ + G GV ++ +A FL+ A +G
Sbjct: 409 AVEPLRNYEEALQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYL 468
Query: 138 LAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y + +E A+ + +AA G A P N
Sbjct: 469 HAQYHTARLYSGSESISQDQEKALYWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA + L A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EATQWLTGAAQRGRIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSTEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|418530669|ref|ZP_13096592.1| Sel1 domain-containing protein [Comamonas testosteroni ATCC 11996]
gi|371452388|gb|EHN65417.1| Sel1 domain-containing protein [Comamonas testosteroni ATCC 11996]
Length = 252
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
GRG KN D+A F+ A +G + + GLMY E A+ YR AA GD
Sbjct: 50 GRGGPKNDDEAAKWFMLAAKQGHAESQANMGLMYGRGRGVPQSDEEAVKWYRLAAEQGDA 109
Query: 170 AA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
N EEAV+L A HV +Q L GRGV + +EA
Sbjct: 110 DGLFNLAVMYDDGRGVAENPEEAVRLYRLAVAQNHVSSQSNLGYMYDHGRGVAQDSKEAF 169
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+WY+ AAE G + +N Y+ G G+ S QA W AA G
Sbjct: 170 KWYMIAAEQGDANSQFNVGSMYALGRGVSQSWPQAYFWALLAAKDGE 216
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L Q + AG +AQ++LA GRG N EAA+W++ AA+ G+ + N L Y G
Sbjct: 28 LLQKAQAGDAQAQFKLAAVYLTGRGGPKNDDEAAKWFMLAAKQGHAESQANMGLMYGRGR 87
Query: 243 GLPLSHRQARKWMKRAADCG 262
G+P S +A KW + AA+ G
Sbjct: 88 GVPQSDEEAVKWYRLAAEQG 107
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 72/193 (37%), Gaps = 40/193 (20%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG------ 226
P N +EA K A+ GH +Q + L RGRGV + +EA +WY AAE G
Sbjct: 54 PKNDDEAAKWFMLAAKQGHAESQANMGLMYGRGRGVPQSDEEAVKWYRLAAEQGDADGLF 113
Query: 227 ------------------------------YVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+V + N Y G G+ ++A KW
Sbjct: 114 NLAVMYDDGRGVAENPEEAVRLYRLAVAQNHVSSQSNLGYMYDHGRGVAQDSKEAFKWYM 173
Query: 257 RAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 312
AA+ G +Q G LG +A + LA + GE + + +I ++L
Sbjct: 174 IAAEQGDANSQFNVGSMYALGRGVSQSWPQAYFWALLAAKDGEKDSARQQEIIAKKLKPA 233
Query: 313 SRDRAMLVVDSWR 325
R + V W+
Sbjct: 234 QRAKIQQQVQEWK 246
>gi|323457143|gb|EGB13009.1| hypothetical protein AURANDRAFT_18516 [Aureococcus anophagefferens]
Length = 334
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGS-----TLAMVDAGL--MYWEMDKKEAAISLYRQA 163
+ +G G +L KA F + AA+G +LA++DA + ++DKK+A + LYR A
Sbjct: 88 YGNGEGTEVDLGKARYWFERAAAKGHEKAIRSLALLDASIDGEGVKLDKKKA-MKLYRAA 146
Query: 164 AVLGDPAAQPANA---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A GD AQ A EEA + ++ G+ A++ L +C G G ++
Sbjct: 147 ADRGDAVAQANLAFLLDSEKRFEEAFRYYALSADQGYTDAEHNLGVCYMEGEGT----EK 202
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA+ + RA E G AM + Y +GEG+ L ++A + + AAD GH AQ + L
Sbjct: 203 AAKIWKRAVELGDAEAMESLGEAYEYGEGVKLDKKKAERLYRAAADRGHALAQHNLAVLL 262
Query: 275 FTEGEMMKAVVYLELATRAGET 296
E + +A Y LA G T
Sbjct: 263 DAEEKFEEAFRYYALAADQGYT 284
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE- 177
K ++A + A +G T A + G+ Y E + E A ++++A LGD A + E
Sbjct: 166 KRFEEAFRYYALSADQGYTDAEHNLGVCYMEGEGTEKAAKIWKRAVELGDAEAMESLGEA 225
Query: 178 ----EAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
E VKL LY+A+ GH AQ+ LA+ L + +EA R+Y AA+
Sbjct: 226 YEYGEGVKLDKKKAERLYRAAADRGHALAQHNLAVLLD----AEEKFEEAFRYYALAADQ 281
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
GY N CY GEG + +AR W +RAA GH
Sbjct: 282 GYTDGETNLGCCYRDGEGTEVDLGKARYWFERAAAKGH 319
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 135 GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ--------PANAEEAVK 181
G+ AM G +YWE +DKK+A L R AA GD AQ EEA +
Sbjct: 9 GNVEAMRHLGKIYWEGSGVKLDKKKAE-RLVRMAAGRGDAVAQNNLGHLLSEERPEEAFR 67
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF- 240
A+ G A+ L C G G + +L +A W+ RAA G+ +A+ + +L +
Sbjct: 68 YYALAADQGFTCAENSLGCCYGNGEGTEVDLGKARYWFERAAAKGHEKAIRSLALLDASI 127
Query: 241 -GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
GEG+ L ++A K + AAD G AQ L +E +A Y L+ G T A+
Sbjct: 128 DGEGVKLDKKKAMKLYRAAADRGDAVAQANLAFLLDSEKRFEEAFRYYALSADQGYTDAE 187
Query: 300 HVKNVILQQLSATSR-----DRAMLVVDSWRAMPSL 330
H V + T + RA+ + D+ AM SL
Sbjct: 188 HNLGVCYMEGEGTEKAAKIWKRAVELGDA-EAMESL 222
>gi|334343014|ref|YP_004555618.1| Sel1 domain-containing protein repeat-containing protein
[Sphingobium chlorophenolicum L-1]
gi|334103689|gb|AEG51112.1| Sel1 domain protein repeat-containing protein [Sphingobium
chlorophenolicum L-1]
Length = 261
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ LY+ A GDP AQ + + + A+K +A+ G AQY L
Sbjct: 61 AMRLYQSLADDGDPRAQNSLGRMYLRGQGTGRDYKAAMKWFRRAAALGVADAQYNLGEIY 120
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
R GVD +L EAARWY RAAE G+V A + ++ Y G+G+ S +A W +RAA G
Sbjct: 121 LREFGVDQDLVEAARWYTRAAEQGHVGAQFTLAVLYMIGQGVSRSPLKAVYWFERAASQG 180
Query: 263 HGKAQLEHGL 272
+AQ++ G+
Sbjct: 181 SAEAQVQLGI 190
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 19/148 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + G+G ++ A+ F + AA G A + G +Y R+ V
Sbjct: 81 GRMYLRGQGTGRDYKAAMKWFRRAAALGVADAQYNLGEIY------------LREFGVDQ 128
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D EA + +A+ GHV AQ+ LA+ G+GV + +A W+ RAA G
Sbjct: 129 DLV-------EAARWYTRAAEQGHVGAQFTLAVLYMIGQGVSRSPLKAVYWFERAASQGS 181
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWM 255
A + Y G+G+ A KW
Sbjct: 182 AEAQVQLGIIYGAGQGVARDSVVAYKWF 209
>gi|292491596|ref|YP_003527035.1| Sel1 domain-containing protein repeat-containing protein
[Nitrosococcus halophilus Nc4]
gi|291580191|gb|ADE14648.1| Sel1 domain protein repeat-containing protein [Nitrosococcus
halophilus Nc4]
Length = 241
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 114 GRGVRKNLD--KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAA 171
GR KN D AL F+ A G+ A GLMY +
Sbjct: 38 GREAYKNQDYETALREFMPLAEEGNMNAQFYMGLMY-------------------ANGHG 78
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P + EEA + + S V A++ LA+ ++G+ V ++ +A W+ RAAE G A
Sbjct: 79 LPQDPEEAQRWFEKFSEQLDVSAKFNLAVMYYQGKSVPQDVPKAVYWFKRAAEEGDPEAQ 138
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVY 286
+N Y G G+ +A KW + AA+ G +AQ G+ +++EG + ++A +
Sbjct: 139 FNLGFIYDNGYGVAQDREEAIKWYEEAANQGIVEAQNNLGV-MYSEGQGVAKDYVQAYFW 197
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+A + G+ A+ ++ + + ++ + A+ + W+
Sbjct: 198 FNVAAKQGDKNAEKYRDTLAKDMNTSQVAEAIKLTHEWQ 236
>gi|375000842|ref|ZP_09725182.1| Sel1 repeat protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353075530|gb|EHB41290.1| Sel1 repeat protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
Length = 355
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q N E + + +A+ G V+AQ++L G G+ + +A +WY ++AE GY A
Sbjct: 40 QTENNSETLTQITKAAERGDVKAQFELGSFYEHGNGITQDYTQALKWYRKSAEQGYKYAQ 99
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELAT 291
YN Y +G+P S+ A+KW ++AA+ G AQ LGLF Y++ A
Sbjct: 100 YNLGTLYDSAKGVPQSYEYAKKWYRKAAEQGLDVAQFN--LGLFYSSGRGGEQDYVQSAE 157
Query: 292 RAGETAA 298
G++AA
Sbjct: 158 WYGKSAA 164
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 22/232 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G ++HG G+ ++ +AL + K A +G A + G +Y E A YR+A
Sbjct: 67 GSFYEHGNGITQDYTQALKWYRKSAEQGYKYAQYNLGTLYDSAKGVPQSYEYAKKWYRKA 126
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + ++ + +++ G+ RAQ L + G GV
Sbjct: 127 AEQGLDVAQFNLGLFYSSGRGGEQDYVQSAEWYGKSAAQGYGRAQTNLGMLYLHGLGVTQ 186
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q A W+ ++A RAM N Y++G G+P +A W ++AA G +A+ +
Sbjct: 187 DYQVARMWFEKSACSNDSRAMNNLGYMYNYGIGVPKDQAKAVVWYQKAAKFGSPEAKTDL 246
Query: 271 GLGLFT-----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
L F E K + L A + GE A + +I + + RD A
Sbjct: 247 ALLYFKGQGGLEHNDKKGMELLIQAAQQGEREAQNNLAIIYSKGDVSFRDYA 298
>gi|52841406|ref|YP_095205.1| hypothetical protein lpg1172 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777082|ref|YP_005185519.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|52628517|gb|AAU27258.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364507896|gb|AEW51420.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 495
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++ G GV K+L KA+ + K A +G A + G++Y + G
Sbjct: 56 GLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLY-----------------LKG 98
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P N+++A+ +AS G Q + + G GV + +A WY +AAEGG
Sbjct: 99 EGV--PQNSQQAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDPGQAFIWYQKAAEGGN 156
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
YN ++ Y +G G+P ++A W +AA+ G AQ G+ L+ GE
Sbjct: 157 SDGQYNLAVMYMYGNGIPKDIKKAIHWYIKAAEQGDLDAQNNLGV-LYERGE 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAAISLYRQAA 164
G ++ G G K++ KA+ + K A G TLA + G++Y E+ + A +++AA
Sbjct: 272 GYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNLGVLYSNDGELQDYKKAYLWFKKAA 331
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
G AQ N EAV +A+ G AQ+ LA+ +G G+ +
Sbjct: 332 DQGFAEAQNNLGLMYMKGNGLSVNYHEAVLWYKRAAEQGLPLAQHNLAIMYMKGLGIKKD 391
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +WY +AAE G A N ++ Y GEG+ ++A W ++AA+ G AQ+ G
Sbjct: 392 NKLAIKWYQKAAEKGLDLAQNNLAVMYIRGEGVKRDFKKAMYWYQKAAEQGLDLAQINLG 451
Query: 272 L----GLFTEGEMMKAVVYLELATRAGETAADHVKN 303
+ G+ + KA ++ A +G A + N
Sbjct: 452 IMYLDGMGVNKDFAKAKYWIGKAKDSGSQDALTIWN 487
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ++L L +G GV+ +L++A WY +AA+ G A N + Y GEG+P + +
Sbjct: 47 GDAQAQFELGLKYEKGDGVNKDLKKAIYWYQKAADQGQAEAQNNLGVLYLKGEGVPQNSQ 106
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
QA W K+A++ G Q G+ GL + + +A ++ + A G + + V+
Sbjct: 107 QAMYWFKKASEQGLAIGQNNIGILYENGLGVKKDPGQAFIWYQKAAEGGNSDGQYNLAVM 166
Query: 306 LQQLSATSRD 315
+ +D
Sbjct: 167 YMYGNGIPKD 176
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +++G GV+K+ +A + K A G++ + +MY + + AI Y +A
Sbjct: 128 GILYENGLGVKKDPGQAFIWYQKAAEGGNSDGQYNLAVMYMYGNGIPKDIKKAIHWYIKA 187
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ P + + A+ +A+ G + AQ L + G
Sbjct: 188 AEQGDLDAQNNLGVLYERGEEVPRDLKAAISWYTRAANEGSLIAQTNLGVLYMTGDPSIQ 247
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A WY +AA G +A N Y G G ++A W ++AA+ G AQ
Sbjct: 248 DGKKAIYWYEKAAAQGGEKAQNNLGYIYEQGIGTEKDMKKAIYWYEKAAENGFTLAQNNL 307
Query: 271 GLGLFTEGEMM---KAVVYLELATRAG 294
G+ +GE+ KA ++ + A G
Sbjct: 308 GVLYSNDGELQDYKKAYLWFKKAADQG 334
>gi|340363636|ref|ZP_08685959.1| Sel1 domain protein [Neisseria macacae ATCC 33926]
gi|339885315|gb|EGQ75044.1| Sel1 domain protein [Neisseria macacae ATCC 33926]
Length = 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GVR++ +A++ + K A +G A + G+MY +K + Y +A
Sbjct: 120 GAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQNNLGVMY---EKGQGVRQDYARA---- 172
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
V+ +A+ G AQ+ L L GRGV + +AA W+ +AAE G
Sbjct: 173 ------------VEWFLKAAEQGTATAQFNLGLMYETGRGVRQDYAQAAGWFRKAAEQGD 220
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A +N +L Y+FG G+P ++ A++W+ +A C +G Q
Sbjct: 221 AYAQHNLALMYAFGRGVPQNYTIAKEWLGKA--CTNGDQQ 258
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV ++ +A+ + K A +G+ A + GL+Y
Sbjct: 48 GVMYEKGLGVHQDYTQAMKWYRKAAEQGAAAAQYNLGLLY-------------------A 88
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ ++ + +A + +A+ GH AQ L G+GV + +A WY ++A+ GY
Sbjct: 89 NDSSNHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGY 148
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A N + Y G+G+ + +A +W +AA+ G AQ GL ++ G + +
Sbjct: 149 APAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGL-MYETGRGVRQDYAQ 207
Query: 283 AVVYLELATRAGETAADH 300
A + A G+ A H
Sbjct: 208 AAGWFRKAAEQGDAYAQH 225
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+V+AQ L + +G GV + +A +WY +AAE G A YN L Y+
Sbjct: 34 QAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAAAAQYNLGLLYANDSSN 93
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAAD 299
+ QA +W ++AA+ GH AQ G ++ G + ++A+ + + + G A
Sbjct: 94 HQDYAQAAEWYRKAAEQGHPSAQNNLG-AMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 300 HVKNVILQQLSATSRDRAMLV 320
+ V+ ++ +D A V
Sbjct: 153 NNLGVMYEKGQGVRQDYARAV 173
>gi|313202401|ref|YP_004041059.1| sel1 domain-containing protein repeat-containing protein
[Methylovorus sp. MP688]
gi|312441717|gb|ADQ85823.1| Sel1 domain protein repeat-containing protein [Methylovorus sp.
MP688]
Length = 251
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQAS 187
VDAG K A ++YR+ A GD AQ N +EAVK ++
Sbjct: 40 VDAG-------KFAQAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSA 92
Query: 188 IAGHVRAQYQLALC-LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
G V AQY L + R GV + EA +WY +AAE G+VR+ N + Y G+ +P
Sbjct: 93 EQGFVEAQYALGVIYFSRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQ 152
Query: 247 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
QA KW AA+ G AQ G ++ EGE + A
Sbjct: 153 DIPQALKWFGLAAEQGDSDAQFNLG-NMYLEGEGVPA 188
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + + + AG +AQY L L RG GV N QEA +WY +AE G+V A Y +
Sbjct: 47 QAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFVEAQYALGVI 106
Query: 238 Y-SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELAT 291
Y S G+ + + +A KW ++AA+ GH ++QL G+ ++ G+++ +A+ + LA
Sbjct: 107 YFSRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGI-VYLRGDVVPQDIPQALKWFGLAA 165
Query: 292 RAGETAAD-HVKNVILQ 307
G++ A ++ N+ L+
Sbjct: 166 EQGDSDAQFNLGNMYLE 182
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV++N +A+ + A +G A G++Y+ D A
Sbjct: 68 GLMYARGDGVQENPQEAVKWYRMSAEQGFVEAQYALGVIYFSRDGGVAM----------- 116
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +EA+K +A+ GHVR+Q L + RG V ++ +A +W+ AAE G
Sbjct: 117 -------DYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAEQGD 169
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQLEHGLGLFTEGEM 280
A +N Y GEG+P S W+ AA+ HG++ + ++ E +M
Sbjct: 170 SDAQFNLGNMYLEGEGVPASMVNGYMWIWLAAENPQDAHGRSGKRKKILMYLEAKM 225
>gi|405950337|gb|EKC18332.1| hypothetical protein CGI_10013666 [Crassostrea gigas]
Length = 604
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 22/158 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV+++ DKA+D + A +G A G+ Y E D ++ Y +AA + + A
Sbjct: 275 YREGEGVKQDTDKAIDLMERAAEQGLAQAQTYLGVHYTETDSQD-----YNKAASMFNEA 329
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ N E AQY L +C +G GV+ N +AA Y +AA+ G+ A
Sbjct: 330 AKQENPE----------------AQYFLGICYEQGLGVEVNECKAAHLYSQAAQSGHDGA 373
Query: 231 MYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQ 267
+YN ++ + +G GLP A + +++A G+ A+
Sbjct: 374 LYNLAVFHEYGIGGLPEDSISAEELYRKSAQLGNKMAE 411
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV + AS G+ R+Q+ L L G+GV + ++AA++Y AA + +AMYN +L
Sbjct: 215 DAVSMWKDASEMGYSRSQFNLGLSYETGQGVKKDAKKAAKYYKLAAAENHTQAMYNLALM 274
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y GEG+ +A M+RAA+ G +AQ G+
Sbjct: 275 YREGEGVKQDTDKAIDLMERAAEQGLAQAQTYLGV 309
>gi|291002059|ref|XP_002683596.1| predicted protein [Naegleria gruberi]
gi|284097225|gb|EFC50852.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F+ G+GV+++ KA + +LK A +G T A G +Y +K A + Q V
Sbjct: 105 GAFFEEGKGVQQDYVKAFEWYLKAAEKGDTDAQFVIGCIY----RKGAGV---EQDDV-- 155
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+A + +A+ G+ RAQ + +C G GV+ + +A WY +AAE G
Sbjct: 156 ----------KAFEWYLRAAEKGYARAQLNIGVCFDDGIGVEQDDVKAFEWYFKAAEKGC 205
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+N CY GEG+ + + A W+ + +
Sbjct: 206 KDGQFNLGCCYKKGEGVEMDLKLALYWLSKVVN 238
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
LK A +G T A + G + E G Q + +A + +A+
Sbjct: 90 LKAAEKGDTTAQFNVGAFFEE-----------------GKGVQQ--DYVKAFEWYLKAAE 130
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQ+ + +G GV+ + +A WYLRAAE GY RA N +C+ G G+
Sbjct: 131 KGDTDAQFVIGCIYRKGAGVEQDDVKAFEWYLRAAEKGYARAQLNIGVCFDDGIGVEQDD 190
Query: 249 RQARKWMKRAADCGHGKAQLEHG 271
+A +W +AA+ G Q G
Sbjct: 191 VKAFEWYFKAAEKGCKDGQFNLG 213
>gi|344924997|ref|ZP_08778458.1| hypothetical protein COdytL_10171 [Candidatus Odyssella
thessalonicensis L13]
Length = 529
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN E+AV+ QA+ G R Q L C G GV + A WY +AA GY A +
Sbjct: 276 ANFEKAVRWCQQAAEQGDARMQLSLGYCYELGIGVPQDDTHAVHWYQQAANQGYAWAQFY 335
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
LCY GE +P S QA W++ AA+ H AQ LG++ E
Sbjct: 336 LGLCYEHGECVPQSAEQAAYWLQEAANQVHADAQF--NLGIYYE 377
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV ++ +A F K A +G A + G Y + V
Sbjct: 373 GIYYEEGNGVTEDDAQAAYLFQKAANQGHAEAQNNLGFCYTYGE------------GVSQ 420
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DPA +AV QA+ G+ RAQ +L C G+GV + + WY +AA GY
Sbjct: 421 DPA-------QAVYWYQQAANQGYARAQKKLGTCYEHGQGVPQDDTQTVYWYQQAANQGY 473
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+N CY G+G+P + QA W +AA G G+A
Sbjct: 474 ADGQFNLGRCYRNGKGVPQNDIQADHWYLQAAMQGDGEA 512
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 78/192 (40%), Gaps = 23/192 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A + L G ++ G GV ++ A+ + + A +G A GL Y + E
Sbjct: 293 DARMQLSLGYCYELGIGVPQDDTHAVHWYQQAANQGYAWAQFYLGLCY---EHGECVPQS 349
Query: 160 YRQAAVLGDPAAQPANAE--------------------EAVKLLYQASIAGHVRAQYQLA 199
QAA AA +A+ +A L +A+ GH AQ L
Sbjct: 350 AEQAAYWLQEAANQVHADAQFNLGIYYEEGNGVTEDDAQAAYLFQKAANQGHAEAQNNLG 409
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
C G GV + +A WY +AA GY RA CY G+G+P Q W ++AA
Sbjct: 410 FCYTYGEGVSQDPAQAVYWYQQAANQGYARAQKKLGTCYEHGQGVPQDDTQTVYWYQQAA 469
Query: 260 DCGHGKAQLEHG 271
+ G+ Q G
Sbjct: 470 NQGYADGQFNLG 481
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
+ Y+L H G+ V+ N ++A RW +AAE G R + CY G G+P A
Sbjct: 258 INGLYRLGNAYHYGKSVNANFEKAVRWCQQAAEQGDARMQLSLGYCYELGIGVPQDDTHA 317
Query: 252 RKWMKRAADCGHGKAQLEHGLGLFTEGEMM 281
W ++AA+ G+ AQ GL + GE +
Sbjct: 318 VHWYQQAANQGYAWAQFYLGL-CYEHGECV 346
>gi|290972227|ref|XP_002668857.1| predicted protein [Naegleria gruberi]
gi|284082390|gb|EFC36113.1| predicted protein [Naegleria gruberi]
Length = 479
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+ G + +G V + KA++ +LK A G T +V G +Y+
Sbjct: 85 KIGYFYANGLEVDTDYSKAMEWYLKAAEMGFTKPIVQIGYLYF----------------- 127
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
G Q + EA+K +A G A + +G GV+ +L +A WYL+AAE
Sbjct: 128 FGKGVEQ--DYVEALKWFLKAVEKGSAEAYVSMGNLYSKGTGVERDLSKAMEWYLKAAEN 185
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
G A +N Y FG G+ ++ +A +W +AA+ G+ AQ + G LF G
Sbjct: 186 GCSTAQFNIGRSYYFGFGVERNYSKAVEWYLKAAENGNTSAQFKVGF-LFETG 237
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
+++ G + G+GV ++ +AL FLK +GS A V G +Y + E +S
Sbjct: 119 IVQIGYLYFFGKGVEQDYVEALKWFLKAVEKGSAEAYVSMGNLYSKGTGVERDLS----- 173
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+A++ +A+ G AQ+ + + G GV+ N +A WYL+AA
Sbjct: 174 --------------KAMEWYLKAAENGCSTAQFNIGRSYYFGFGVERNYSKAVEWYLKAA 219
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
E G A + + G+G+ + ++ W
Sbjct: 220 ENGNTSAQFKVGFLFETGKGIEKNFKKEVFW 250
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G + Y++ G VD + +A WYL+AAE G+ + + Y FG+G+ +
Sbjct: 78 GCAESTYKIGYFYANGLEVDTDYSKAMEWYLKAAEMGFTKPIVQIGYLYFFGKGVEQDYV 137
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+A KW +A + G +A + G L+++G
Sbjct: 138 EALKWFLKAVEKGSAEAYVSMG-NLYSKG 165
>gi|419798038|ref|ZP_14323481.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696379|gb|EIG26868.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 267
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GVR++ +A++ + K A +G A + G+MY +K + Y +A
Sbjct: 120 GAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQNNLGVMY---EKGQGVRQDYARA---- 172
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
V+ +A+ G AQ+ L L GRGV + +AA W+ +AAE G
Sbjct: 173 ------------VEWFLKAAEQGTATAQFNLGLMYETGRGVRQDYAQAAGWFRKAAEQGD 220
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A +N +L Y+FG G+P ++ A++W+ +A C +G Q
Sbjct: 221 AYAQHNLALMYAFGRGVPQNYTIAKEWLGKA--CTNGDQQ 258
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV ++ +A+ + K A +G+ A + GL+Y
Sbjct: 48 GVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLY-------------------A 88
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ ++ + +A + +A+ GH AQ L G+GV + +A WY ++A+ GY
Sbjct: 89 NDSSNHQDYAQAAEWYRKAAEQGHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQGY 148
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMK 282
A N + Y G+G+ + +A +W +AA+ G AQ GL ++ G + +
Sbjct: 149 APAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGL-MYETGRGVRQDYAQ 207
Query: 283 AVVYLELATRAGETAADH 300
A + A G+ A H
Sbjct: 208 AAGWFRKAAEQGDAYAQH 225
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+V+AQ L + +G GV + +A +WY +AAE G A YN L Y+
Sbjct: 34 QAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSSN 93
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAAD 299
+ QA +W ++AA+ GH AQ G ++ G+ ++A+ + + + G A
Sbjct: 94 HQDYAQAAEWYRKAAEQGHPSAQNNLG-AMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 300 HVKNVILQQLSATSRDRAMLV 320
+ V+ ++ +D A V
Sbjct: 153 NNLGVMYEKGQGVRQDYARAV 173
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
L+AAE G V+A N + Y G G+ + QA KW ++AA+ G AQ GL
Sbjct: 33 LQAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGL 85
>gi|148358886|ref|YP_001250093.1| TPR repeat-containing protein [Legionella pneumophila str. Corby]
gi|296106934|ref|YP_003618634.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
gi|148280659|gb|ABQ54747.1| TPR repeat protein [Legionella pneumophila str. Corby]
gi|295648835|gb|ADG24682.1| TPR repeat protein, SEL1 subfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G +Q + EA K +A+ G+ AQ + L G GV + +A W
Sbjct: 95 ------DTGKGVSQ--DFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTW 146
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LGL G
Sbjct: 147 FKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLGLLYTG 204
Query: 279 E 279
+
Sbjct: 205 Q 205
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA +A+ + AQ L G+GV + EA +WY++AAE G A N
Sbjct: 67 NYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ KA + + A
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKA 186
Query: 291 TRAGETAADHVKNVIL--QQLSATSRDRA 317
G+ ++ ++ Q+ ++ D+A
Sbjct: 187 AEQGDEKGEYSLGLLYTGQEGGISADDKA 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 26/234 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W A+ L G + G+GV ++ +A ++K A +G+ +A + GLMY
Sbjct: 71 ARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMY 130
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
GD A A+ ++A +A+ G+ +AQ L G+G
Sbjct: 131 -----------------ATGDGVA--ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA 266
++++A WY +AAE G + Y+ L Y+ E G+ + A W +AA+ GH A
Sbjct: 172 TPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNA 231
Query: 267 Q----LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
Q + G + + +KA + + A G+ A +L L+ T D+
Sbjct: 232 QTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLL--LTGTGVDK 283
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQY-MMGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD + A+ + A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 269 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 304
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
>gi|365879801|ref|ZP_09419202.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292160|emb|CCD91733.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 677
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 111 FKH--GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
F H G GV ++ +A F + A LA+ + GLMY D E ++
Sbjct: 233 FSHLKGSGVAEDHVEAARLFAEAAKHDDALALYNIGLMYLNGDGIEKSV----------- 281
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+ A L +A+ ++ A LA +G G + +++EA RWY AAE G V
Sbjct: 282 --------DRAETALRKAARKDYLPAIQTLAEFYAKGLGGEPDMREAVRWYEAAAERGDV 333
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 284
+A + Y+ G G+P S R A +W +AA+ GHG A G+ G ++ KA+
Sbjct: 334 QAQFLVGRFYAAGTGVPPSPRSAARWFLQAAEGGHGTAAFNIGIFHLNGTGVARDVAKAI 393
Query: 285 VYLELATRAGETAADHVKNVILQQLSATSRDRA 317
+ E A+ AG AA+ + + RD+A
Sbjct: 394 HWFEKASEAGLRAAEVQLGRLYASGTGVERDQA 426
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 23/195 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGS------TLAMVDAGLMYWEMDKK 153
+A+ L G + +G G+ K++D+A ++ L+ AAR TLA A + E D +
Sbjct: 260 DALALYNIGLMYLNGDGIEKSVDRA-ETALRKAARKDYLPAIQTLAEFYAKGLGGEPDMR 318
Query: 154 EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
EA + Y AA GD AQ P + A + QA+ GH A + + +
Sbjct: 319 EA-VRWYEAAAERGDVQAQFLVGRFYAAGTGVPPSPRSAARWFLQAAEGGHGTAAFNIGI 377
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G GV ++ +A W+ +A+E G A Y+ G G+ +A +W+ +AAD
Sbjct: 378 FHLNGTGVARDVAKAIHWFEKASEAGLRAAEVQLGRLYASGTGVERDQARAERWLGKAAD 437
Query: 261 CGHGKAQLEHGLGLF 275
G +A++ L LF
Sbjct: 438 SGDAEAKV--ALALF 450
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G +HGRG ++L A + + + AA+ G +Y ++ V
Sbjct: 158 RMGDLCRHGRGGPRDLAAAREWYARAAAQDLADGAFGLGDIY------------FQGLGV 205
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
DP E AV QA+ GHVRA+ LA +G GV + EAAR + AA+
Sbjct: 206 ETDP-------ETAVAWYRQAADGGHVRAKVALAFSHLKGSGVAEDHVEAARLFAEAAKH 258
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMM 281
A+YN L Y G+G+ S +A +++AA + A + GL E +M
Sbjct: 259 DDALALYNIGLMYLNGDGIEKSVDRAETALRKAARKDYLPAIQTLAEFYAKGLGGEPDMR 318
Query: 282 KAVVYLELATRAGETAA 298
+AV + E A G+ A
Sbjct: 319 EAVRWYEAAAERGDVQA 335
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
Q+ LA+ G GV +L++ WY AA+GG+ A YN ++ + G+G +A W
Sbjct: 552 QFDLAVLYCTGNGVAQSLEKGVAWYEAAAQGGHTFAQYNLAVMTAKGQGCARDPDKAMDW 611
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAA 298
+ AA+ G AQ+ G L T + K AV++ + A G A
Sbjct: 612 FRTAAESGMAAAQVALGDALATGNGLAKDLDAAVLWFDKAAAQGHEGA 659
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+ V A+ GH AQY LA+ +G+G + +A W+ AAE G A
Sbjct: 570 EKGVAWYEAAAQGGHTFAQYNLAVMTAKGQGCARDPDKAMDWFRTAAESGMAAAQVALGD 629
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGH 263
+ G GL A W +AA GH
Sbjct: 630 ALATGNGLAKDLDAAVLWFDKAAAQGH 656
>gi|315453384|ref|YP_004073654.1| Sel1-like repeat-containing protein [Helicobacter felis ATCC 49179]
gi|315132436|emb|CBY83064.1| Sel1-like repeat protein [Helicobacter felis ATCC 49179]
Length = 560
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK 153
++A L G + +G+GV K+ KALD F + A G A + G++Y E D
Sbjct: 328 QKAQTLYNLGVVYANGQGVPKDESKALDYFQQSAKLGHAKANYNLGVIYNRGLGVEKDTT 387
Query: 154 EAAISLYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+A S +++AA LGD A P + +A+ +A+ ++ A + L
Sbjct: 388 QA-FSYFQEAAKLGDDKAYYNLGVMCEHGRGTPKDIPQAIFYFEEAANMDNINALHHLGS 446
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
H G+ V+ + A ++ RAA+ G ++ YN + YS G+G+ +QA ++A+D
Sbjct: 447 LYHMGKEVEKDASRAFAYFYRAAQLGSIKDDYNVGVMYSQGDGVEKDMQQALLHFQKASD 506
Query: 261 CGHGKAQLEHGLGLFTEGE 279
G A G+ ++ +GE
Sbjct: 507 GGSSNAMYNMGV-IYYQGE 524
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 7/224 (3%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
+ +A L ++ G+GV ++ A+ + + A G T A + M +++ ++A
Sbjct: 272 EMGDAGALSSLANLYRTGKGVEQDKYTAIAYYKEAADLGDTQAFANLSAMNTQVNNQKAQ 331
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+LY V + P + +A+ Q++ GH +A Y L + +RG GV+ + +A
Sbjct: 332 -TLYNLGVVYANGQGVPKDESKALDYFQQSAKLGHAKANYNLGVIYNRGLGVEKDTTQAF 390
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG-----HGKAQLEHG 271
++ AA+ G +A YN + G G P QA + + AA+ H L H
Sbjct: 391 SYFQEAAKLGDDKAYYNLGVMCEHGRGTPKDIPQAIFYFEEAANMDNINALHHLGSLYH- 449
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+G E + +A Y A + G D+ V+ Q +D
Sbjct: 450 MGKEVEKDASRAFAYFYRAAQLGSIKDDYNVGVMYSQGDGVEKD 493
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKE--AAISL 159
L+ G + +GRGV ++ KALD F + A G + V+ G+MY + KK+ A+
Sbjct: 63 LVYLGVMYANGRGVAQDNTKALDYFQQAANLGDSQGFVNLGVMYNLGKGVKKDYQKALDY 122
Query: 160 YRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
++ AA L D A + +A++ QA+ G V+A L + G+
Sbjct: 123 FKHAASLDDVNALNYMGLMYRTGNGVGVDYAKALEFYQQAADRGSVKALVSLGSMHYAGQ 182
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
G+ + +A ++ +AA+ G RA YN ++ Y GEG+ ++ + K +A G KA
Sbjct: 183 GMAKDFAKALDYFQQAADLGDARASYNLAVMYENGEGVEKDGDKSLELFKESAQAGFAKA 242
Query: 267 ------QLEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
E G G+ E +M KA+ + A G+ A
Sbjct: 243 TCTLASMYEDGEGV--EKDMDKAIALYQEAGEMGDAGA 278
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 45/274 (16%)
Query: 87 VCKSWNDALRPLREAMVL-----LRW-GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K + AL + A L L + G ++ G GV + KAL+ + + A RGS A+
Sbjct: 112 VKKDYQKALDYFKHAASLDDVNALNYMGLMYRTGNGVGVDYAKALEFYQQAADRGSVKAL 171
Query: 141 VDAGLMYWE---MDKKEA-AISLYRQAAVLGDPAAQ-------------PANAEEAVKLL 183
V G M++ M K A A+ ++QAA LGD A + +++++L
Sbjct: 172 VSLGSMHYAGQGMAKDFAKALDYFQQAADLGDARASYNLAVMYENGEGVEKDGDKSLELF 231
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+++ AG +A LA G GV+ ++ +A Y A E G A+ + + Y G+G
Sbjct: 232 KESAQAGFAKATCTLASMYEDGEGVEKDMDKAIALYQEAGEMGDAGALSSLANLYRTGKG 291
Query: 244 LPLSHRQARKWMKRAADCG----------------HGKAQLEHGLG-LFTEGEMM----- 281
+ A + K AAD G + KAQ + LG ++ G+ +
Sbjct: 292 VEQDKYTAIAYYKEAADLGDTQAFANLSAMNTQVNNQKAQTLYNLGVVYANGQGVPKDES 351
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
KA+ Y + + + G A++ VI + +D
Sbjct: 352 KALDYFQQSAKLGHAKANYNLGVIYNRGLGVEKD 385
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQP 173
++ ++AL S+ A GS+ A+V G+MY A+ ++QAA LGD
Sbjct: 41 ERHYEEALASYQNAAELGSSRALVYLGVMYANGRGVAQDNTKALDYFQQAANLGDSQGFV 100
Query: 174 A-----NAEEAVKLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
N + VK YQ A+ V A + L G GV + +A +Y
Sbjct: 101 NLGVMYNLGKGVKKDYQKALDYFKHAASLDDVNALNYMGLMYRTGNGVGVDYAKALEFYQ 160
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
+AA+ G V+A+ + + G+G+ +A + ++AAD G +A E+G G+
Sbjct: 161 QAADRGSVKALVSLGSMHYAGQGMAKDFAKALDYFQQAADLGDARASYNLAVMYENGEGV 220
Query: 275 FTEGE 279
+G+
Sbjct: 221 EKDGD 225
>gi|281422834|ref|ZP_06253833.1| Sel1 repeat family protein [Prevotella copri DSM 18205]
gi|281403100|gb|EFB33780.1| Sel1 repeat family protein [Prevotella copri DSM 18205]
Length = 424
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+ + G+GV +NL +A+ F K A + + A + G Y+ + A+ Y +
Sbjct: 55 GEAYYDGKGVTENLTEAVKWFTKAAEQENAKAEYNLGNCYYYGYGVQYKDYGEAVKWYTK 114
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AQ + N +EAVK +A+ G AQ L C G V+
Sbjct: 115 AAEQEYAEAQNSLGYCYEFGEGVDKNLKEAVKWYTKAAEQGLPLAQCNLGACYENGDWVE 174
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
NL+EA +WY +AA GY +A Y Y GEG+ + +A KW +A + +A
Sbjct: 175 KNLEEAVKWYTKAANQGYAKAQYYLGKAYDKGEGVAKNDSEAMKWYLKAVKNNYPQAAYY 234
Query: 270 HGLGLFTEGEMMKAVV 285
+G + G+ K V
Sbjct: 235 YG-AMLLAGDKQKGVT 249
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL-S 247
+G AQ L + G+GV NL EA +W+ +AAE +A YN CY +G G+
Sbjct: 45 SGEAEAQNALGEAYYDGKGVTENLTEAVKWFTKAAEQENAKAEYNLGNCYYYGYGVQYKD 104
Query: 248 HRQARKWMKRAADCGHGKAQLEHGLGL---FTEG 278
+ +A KW +AA+ + +AQ + LG F EG
Sbjct: 105 YGEAVKWYTKAAEQEYAEAQ--NSLGYCYEFGEG 136
>gi|419798028|ref|ZP_14323471.1| Sel1 repeat protein [Neisseria sicca VK64]
gi|385696369|gb|EIG26858.1| Sel1 repeat protein [Neisseria sicca VK64]
Length = 305
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GV ++ KA F K AA+G A D GL+Y LG
Sbjct: 82 GGLYYQGKGVVQDYKKAKYWFQKAAAQGFAKAQYDLGLIY-----------------FLG 124
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q +A + +A+ G++ AQY LA+ G GV ++A +WY +AAE G
Sbjct: 125 KGIEQDYG--QAAQWYEKAAKQGYLDAQYDLAIMYDNGLGVGKAPEKAFQWYRKAAEQGD 182
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMM 281
+A Y + Y G G+ +QA W+ RAAD + KAQL+ HG G+ + +
Sbjct: 183 NQAQYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK-- 240
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+A+ + A G A + ++ ++ S +R
Sbjct: 241 QALYWYRKAAEQGNAEAQYNLGLMYEEGQGVSENR 275
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
L +A + +P L K N A + G + G+G K+ +A F
Sbjct: 15 LGHMANASNIPNFAETELEAKQGNAASQ--------FNLGLMYYSGKGAPKDYKQAEHWF 66
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ-AS 187
+ A +G A + G +Y++ + + Y++A K +Q A+
Sbjct: 67 RRAAEQGDVDAQTNLGGLYYQ---GKGVVQDYKKA-----------------KYWFQKAA 106
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G +AQY L L G+G++ + +AA+WY +AA+ GY+ A Y+ ++ Y G G+ +
Sbjct: 107 AQGFAKAQYDLGLIYFLGKGIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMYDNGLGVGKA 166
Query: 248 HRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELAT 291
+A +W ++AA+ G +AQ HGLG+ + + +AV++L A
Sbjct: 167 PEKAFQWYRKAAEQGDNQAQYTVATRYMHGLGV--QKDFKQAVLWLHRAA 214
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-------EAAISLYRQAAVL 166
G+G+ ++ +A + K A +G A D +MY D E A YR+AA
Sbjct: 124 GKGIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMY---DNGLGVGKAPEKAFQWYRKAAEQ 180
Query: 167 GDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ A ++AV L++A+ +++AQ L + G GV + +
Sbjct: 181 GDNQAQYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK 240
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+A WY +AAE G A YN L Y G+G+ + + A++W K+A D G
Sbjct: 241 QALYWYRKAAEQGNAEAQYNLGLMYEEGQGVSENRKVAKEWYKKACDNG 289
>gi|42526681|ref|NP_971779.1| hypothetical protein TDE1171 [Treponema denticola ATCC 35405]
gi|41816874|gb|AAS11660.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length = 267
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 113 HGRGVRKNLDK--ALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G +DK A+ + K A +G +A + MY +DKK+A Y +AA
Sbjct: 45 YDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIPIDKKQA-FYWYTKAAE 103
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ AAQ P + ++A +A+ G+ +AQ+ L ++G G+ +
Sbjct: 104 QGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYAKAQFNLGGMYYKGNGILTDK 163
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++A W+ +AAE GY A +N +L Y G+G+ +QA W ++A+ G AQ GL
Sbjct: 164 KQAFYWFKKAAEQGYAEAQFNLALMYYNGDGILADKKQAFYWYTKSAEKGLAFAQFNLGL 223
Query: 273 GLFTEGE 279
+++ G+
Sbjct: 224 -MYSNGD 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G G+ + +A + K A +G+ A GLMY D K+ A +++AA G
Sbjct: 84 GDGIPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYA 143
Query: 170 AAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ + ++A +A+ G+ AQ+ LAL + G G+ + ++A
Sbjct: 144 KAQFNLGGMYYKGNGILTDKKQAFYWFKKAAEQGYAEAQFNLALMYYNGDGILADKKQAF 203
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
WY ++AE G A +N L YS G+G+ +QA W+K+A + G+
Sbjct: 204 YWYTKSAEKGLAFAQFNLGLMYSNGDGILADKKQAAYWIKQAYENGY 250
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ LA +G + ++A WY +AAE GY A + Y G+G+P+ +
Sbjct: 33 GDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIPIDKK 92
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
QA W +AA+ G+ AQ GL +++ G+
Sbjct: 93 QAFYWYTKAAEQGNVAAQCILGL-MYSNGD 121
>gi|29122957|gb|AAO65770.1| SEL1L [Rattus norvegicus]
Length = 615
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 208 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 267
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 268 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 327
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 328 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 387
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 388 KDDDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 424
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 83 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 142
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 143 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 202
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 203 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 262
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 263 ADMGNPVGQ--SGLGM 276
>gi|237746480|ref|ZP_04576960.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377831|gb|EEO27922.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 290
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P ++E+A+ +++ G+ +A + + + G+G+ N Q A +W+L++A GY A Y
Sbjct: 82 PKDSEKALYWFLKSAKQGNAQAMFDIGVMYGNGQGITQNYQTARQWHLKSASKGYANAQY 141
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
L Y+ G+G+ S+ QAR W RAA GH A + G LF EG
Sbjct: 142 YLGLLYAQGDGVEQSYEQARFWYARAAAQGHASAIVNLG-NLFYEG 186
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRP--LREAMVLLRWGKRFKHGRGVRKNL 121
LPF L+ + T Q K+W +P R + V + G V K+
Sbjct: 26 LPFFRLSYADNASTGLQYYQDRQFEKAWQYFSKPDAQRNSRVQRNIAYMYLKGIVVPKDS 85
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVK 181
+KAL FLK A +G+ AM D G+MY G+ N + A +
Sbjct: 86 EKALYWFLKSAKQGNAQAMFDIGVMY-------------------GNGQGITQNYQTARQ 126
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
+++ G+ AQY L L +G GV+ + ++A WY RAA G+ A+ N L F
Sbjct: 127 WHLKSASKGYANAQYYLGLLYAQGDGVEQSYEQARFWYARAAAQGHASAIVN--LGNLFY 184
Query: 242 EGLPLSHRQARKWM--KRAADCGHGKAQL 268
EGL + +M K+AA+ G AQ
Sbjct: 185 EGLGGEQDRVLAFMLCKKAAELGDAYAQF 213
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
R Q +A +G V + ++A W+L++A+ G +AM++ + Y G+G+ +++ AR
Sbjct: 66 RVQRNIAYMYLKGIVVPKDSEKALYWFLKSAKQGNAQAMFDIGVMYGNGQGITQNYQTAR 125
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEGE 279
+W ++A G+ AQ GL L+ +G+
Sbjct: 126 QWHLKSASKGYANAQYYLGL-LYAQGD 151
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS-- 158
A + G + +G+G+ +N A LK A++G A GL+Y + D E +
Sbjct: 101 AQAMFDIGVMYGNGQGITQNYQTARQWHLKSASKGYANAQYYLGLLYAQGDGVEQSYEQA 160
Query: 159 --LYRQAAVLGDPAA---------QPANAEE----AVKLLYQASIAGHVRAQYQLALCLH 203
Y +AA G +A + E+ A L +A+ G AQ+ LA
Sbjct: 161 RFWYARAAAQGHASAIVNLGNLFYEGLGGEQDRVLAFMLCKKAAELGDAYAQFNLAELYR 220
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCG 262
GR N +A WY ++A+ G V+AM + + G G P++ AR+W +R AD
Sbjct: 221 TGRVTSENPGKALYWYRKSADQGTVKAMRKLATIHDRGWLGQPVNKPLAREW-ERKADAA 279
Query: 263 HGKAQLE 269
+ + E
Sbjct: 280 EARQRRE 286
>gi|114776923|ref|ZP_01451966.1| hypothetical protein SPV1_11926 [Mariprofundus ferrooxydans PV-1]
gi|114553009|gb|EAU55440.1| hypothetical protein SPV1_11926 [Mariprofundus ferrooxydans PV-1]
Length = 633
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
LY+Q L A+ ++A L Q+++ G+V AQ+ LA L G D N QEAA W
Sbjct: 204 LYQQGQGL------TADMQQAESWLRQSAVQGNVEAQFHLAELLISREG-DANAQEAAAW 256
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
YL+AA +V+A + Y+ G G+ +++A W+ AA G +AQ G+ G
Sbjct: 257 YLKAANQKHVKAAAAIGVLYATGRGIKQDNQKALHWLNIAATAGDVRAQANLGIMYAESG 316
Query: 279 EMMKAVVYLELATRAGETAADH 300
E +A+ +L A +AG T A++
Sbjct: 317 EDAQAIHWLTEAAKAGLTDAEN 338
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
V N + A+ + K A +G+ AM + ++Y+ + A L+ +AA GD AQ
Sbjct: 421 VVTNSEDAITWYQKAAEQGNADAMYNLAVLYYRKEDAARAFELFERAAKAGDSEAQ---- 476
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ +YQ R +G FN+ +A WY +AA+ GY A +N
Sbjct: 477 -NIIASMYQ------------------RAQGTAFNMPQAIAWYEKAAQSGYAPAQFNLGN 517
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y G+G+ +A W K+AA+ G AQ
Sbjct: 518 LYRKGDGVEQKDSKALYWYKKAAESGFAPAQ 548
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + GRG++++ KAL A G A + G+MY E + AI +AA G
Sbjct: 273 GVLYATGRGIKQDNQKALHWLNIAATAGDVRAQANLGIMYAESGEDAQAIHWLTEAAKAG 332
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A+ + A+ L +A++ H AQY LAL RG G N +
Sbjct: 333 LTDAENNLAVFSALGRGGKPDMRAALGWLKKAAVTDHT-AQYNLALMYLRGIGTIQNDEA 391
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA ++ + G RA L Y G G+ + A W ++AA+ G+ A +
Sbjct: 392 AAELLKQSLQDGNPRASLLLGLLYDLGRGVVTNSEDAITWYQKAAEQGNADAMYNLAVLY 451
Query: 275 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 313
+ + + +A E A +AG++ A ++ + Q+ T+
Sbjct: 452 YRKEDAARAFELFERAAKAGDSEAQNIIASMYQRAQGTA 490
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
DF+ AA W+ AA+GG +A Y ++ Y G+G+ QA +W++ AA GH +AQ
Sbjct: 47 DFDT--AAEWFKVAAKGGKAQAQYRFAMLYRDGKGVKQDDSQAVRWLQLAAAQGHTEAQY 104
Query: 269 EHGL 272
+ G+
Sbjct: 105 QLGV 108
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A Q + + A + A+ G +AQY+ A+ G+GV + +A RW AA G
Sbjct: 39 GKEAFQQGDFDTAAEWFKVAAKGGKAQAQYRFAMLYRDGKGVKQDDSQAVRWLQLAAAQG 98
Query: 227 YVRAMYNTSLCYSFGEGL 244
+ A Y + G G+
Sbjct: 99 HTEAQYQLGVLLENGRGV 116
>gi|54294242|ref|YP_126657.1| hypothetical protein lpl1307 [Legionella pneumophila str. Lens]
gi|53754074|emb|CAH15547.1| hypothetical protein lpl1307 [Legionella pneumophila str. Lens]
Length = 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNDALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G +Q + EA K +A+ G+ AQ + L G GV + +A W
Sbjct: 95 ------DTGKGVSQ--DFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVTASDDKAFTW 146
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LGL G
Sbjct: 147 FKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLGLLYTG 204
Query: 279 E 279
+
Sbjct: 205 Q 205
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA +A+ AQ L G+GV + EA +WY++AAE G A N
Sbjct: 67 NYEEARNWYQKAADKNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ KA + + A
Sbjct: 127 GLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKA 186
Query: 291 TRAGETAADHVKNVIL--QQLSATSRDRA 317
G+ ++ ++ Q+ ++ D+A
Sbjct: 187 AEQGDEKGEYSLGLLYTGQEGGISADDKA 215
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVTASDDKAFTWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD + A+ + A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 269 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 304
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W +A+ L G + G+GV ++ +A ++K A +G+ +A + GLMY
Sbjct: 71 ARNWYQKAADKNDALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMY 130
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
GD A+ ++A +A+ G+ +AQ L G+G
Sbjct: 131 -----------------ATGDGVT--ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA 266
++++A WY +AAE G + Y+ L Y+ E G+ + A W +AA+ GH A
Sbjct: 172 TPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNA 231
Query: 267 Q 267
Q
Sbjct: 232 Q 232
>gi|421626736|ref|ZP_16067564.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
gi|408695053|gb|EKL40612.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
Length = 301
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKE-- 154
EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y ++ KK+
Sbjct: 55 EAIFVL--ASMYATGEGEKLDQKKALELFEKSAQLGSSNAMLQLGLIYRNGNDLIKKDDL 112
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A+ + Q A G+P+A + +A K Q++ G +++Q +A
Sbjct: 113 KALKWFEQGAKKGNPSAIHNLGVSYYKGLGITEDKAKAFKYFSQSAELGLLQSQVIVAGL 172
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
L+ G GV + ++A W L+AA G V + N L Y G+G+ A+KW ++AA+
Sbjct: 173 LYNGEGVTKDHKKAFEWALKAANQGDVESQNNIGLAYENGDGVAKGPVLAKKWFEKAANN 232
Query: 262 GHGKAQLEHGLGLF----TEGEMMKAVVYLELATRAGETA 297
G Q L F E K++ Y E A A A
Sbjct: 233 GSVLGQYNLALKYFDGNGVEQNFSKSIEYAEKAANAQNKA 272
>gi|54297265|ref|YP_123634.1| hypothetical protein lpp1310 [Legionella pneumophila str. Paris]
gi|397666972|ref|YP_006508509.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
gi|53751050|emb|CAH12461.1| hypothetical protein lpp1310 [Legionella pneumophila str. Paris]
gi|395130383|emb|CCD08623.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
Length = 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G +Q + EA K +A+ G+ AQ + L G GV + +A W
Sbjct: 95 ------DTGKGVSQ--DFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTW 146
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LGL G
Sbjct: 147 FKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLGLLYTG 204
Query: 279 E 279
+
Sbjct: 205 Q 205
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA +A+ + AQ L G+GV + EA +WY++AAE G A N
Sbjct: 67 NYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ KA + + A
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKA 186
Query: 291 TRAGETAADHVKNVIL--QQLSATSRDRA 317
G+ ++ ++ Q+ ++ D+A
Sbjct: 187 AEQGDEKGEYSLGLLYTGQEGGISADDKA 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 26/234 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W A+ L G + G+GV ++ +A ++K A +G+ +A + GLMY
Sbjct: 71 ARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMY 130
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
GD A A+ ++A +A+ G+ +AQ L G+G
Sbjct: 131 -----------------ATGDGVA--ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA 266
++++A WY +AAE G + Y+ L Y+ E G+ + A W +AA+ GH A
Sbjct: 172 TPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNA 231
Query: 267 Q----LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
Q + G + + +KA + + A G+ A +L L+ T D+
Sbjct: 232 QTYLAYYYLKGYGVDADPVKAAYWYQSAAEKGQPEAQAQLGQLL--LTGTGVDK 283
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD + A+ + A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 269 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 304
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
>gi|237748158|ref|ZP_04578638.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379520|gb|EEO29611.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 404
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR 161
MV L G + HG+GV ++L+K+L K A RG A + GL A+ S Y
Sbjct: 179 MVQLYLGLMYGHGKGVPRDLNKSLFWVEKAADRGLPHAQLARGLF--------ASFSHYY 230
Query: 162 QAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
P + E+AV L +A+ G AQ+ LAL RGRGV+ + ++A W +
Sbjct: 231 -----------PRDDEKAVLYLTKAAKQGMPMAQFYLALMYQRGRGVEQSNEQALHWNML 279
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
AAE GY A Y S G G+ + W+ RAA G AQ G+ + EG+
Sbjct: 280 AAEQGYPDAEYAMSRMAELGIGVTADKAWSMMWLDRAAHHGMPLAQYLMGMA-YLEGK 336
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+E ++L+ +++ G VRAQ L G V + EA +W RAA G L
Sbjct: 127 DEGIRLIRRSAEGGFVRAQLYLGTLYANGTHVKADPHEAEKWLSRAAGQGSPMVQLYLGL 186
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
Y G+G+P ++ W+++AAD G AQL GL + + KAV+YL A +
Sbjct: 187 MYGHGKGVPRDLNKSLFWVEKAADRGLPHAQLARGLFASFSHYYPRDDEKAVLYLTKAAK 246
Query: 293 AG 294
G
Sbjct: 247 QG 248
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%)
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ E R R+AEGG+VRA Y+ G + +A KW+ RAA G QL
Sbjct: 125 TIDEGIRLIRRSAEGGFVRAQLYLGTLYANGTHVKADPHEAEKWLSRAAGQGSPMVQLYL 184
Query: 271 GL 272
GL
Sbjct: 185 GL 186
>gi|422022458|ref|ZP_16368966.1| Sel1 domain-containing protein [Providencia sneebia DSM 19967]
gi|414096951|gb|EKT58607.1| Sel1 domain-containing protein [Providencia sneebia DSM 19967]
Length = 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAA 156
++L W ++ G +K+ KA +L A + A+ G MY E++ ++A
Sbjct: 152 LMLAYW---YEKGITTKKDQQKAQKIYLSLAENNNPQALYLLGYQAATGMYDEVNYQQA- 207
Query: 157 ISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ ++A LG AQ + + + A+K L ++ G + AQ+ LAL
Sbjct: 208 YQYFSRSAQLGFSPAQNSLGMLYLHGQGGKKDVQTAIKWLTLSAEQGEISAQFNLALIYA 267
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
RG G+ + A RW++ AA+ G A Y + CY +G G+ S +QA KW K AA GH
Sbjct: 268 RGDGIPADQATACRWFISAAQHGSPDAQYASGACYQYGMGVTQSDKQALKWYKLAATQGH 327
Query: 264 GKA 266
+A
Sbjct: 328 ERA 330
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
+G AQ+ LA+ + + EA +WY +AAE G+ +A N +L Y G G+ +
Sbjct: 39 SGQTEAQFNLAMLYQS----ENKMTEAVKWYQQAAEKGFTKAQINLALLYQQGHGVKKDN 94
Query: 249 RQARKWMKRAADCG 262
Q WMK+AAD G
Sbjct: 95 AQMLYWMKQAADAG 108
>gi|303237418|ref|ZP_07323984.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
gi|302482368|gb|EFL45397.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
Length = 429
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E +L A+ AG V AQY + C G GV+ N EAA+WY +AAE G A +
Sbjct: 46 EEFQLYKDAAKAGDVDAQYNVGYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQHGLGYL 105
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHG 264
Y++G+G+ + +A KW +AA+ G+G
Sbjct: 106 YAYGQGVKENWTEAAKWFSKAAEQGYG 132
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 63/260 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------------------ 149
G + +G+GV++N +A F K A +G L++ G Y +
Sbjct: 103 GYLYAYGQGVKENWTEAAKWFSKAAEQGYGLSIFAMGACYEDGNGVPQNFVEAAKYYRKA 162
Query: 150 MDKK--EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+DK EA +L R + G P N EEAVKL + + + AQY L LC H G G
Sbjct: 163 VDKNVVEAYEALGRFYYIGG---GVPQNYEEAVKLFAKGAALRNPNAQYYLGLCYHFGNG 219
Query: 208 VDFNLQEAARWYLRAAEGGYV-----------------------------------RAMY 232
+ + EA + YL +AE G+ A +
Sbjct: 220 IKADTTEAVKLYLLSAEQGFAPAQNELGNFYLTDPTHKDYKKALEWLNQAVAQDLPDAFF 279
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVV-YL 287
N +LCY G G+ + + A +W ++AA G+ +A + G+ G E M AV YL
Sbjct: 280 NMALCYEEGWGVEQNLKTAVEWNRKAALAGNAEAITKMGIAYEEGKGVEQNMTDAVKWYL 339
Query: 288 ELATRAGETAADHVKNVILQ 307
+ A A + +LQ
Sbjct: 340 KGAELGNSDAQTNYAKCLLQ 359
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
LY+ AA GD AQ N EA K +A+ G AQ+ L
Sbjct: 48 FQLYKDAAKAGDVDAQYNVGYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQHGLGYLYA 107
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD--- 260
G+GV N EAA+W+ +AAE GY +++ CY G G+P + +A K+ ++A D
Sbjct: 108 YGQGVKENWTEAAKWFSKAAEQGYGLSIFAMGACYEDGNGVPQNFVEAAKYYRKAVDKNV 167
Query: 261 ------------CGHGKAQ-LEHGLGLFTEGEMMK---AVVYLELATRAGE-TAADHVKN 303
G G Q E + LF +G ++ A YL L G AD +
Sbjct: 168 VEAYEALGRFYYIGGGVPQNYEEAVKLFAKGAALRNPNAQYYLGLCYHFGNGIKADTTEA 227
Query: 304 VILQQLSA 311
V L LSA
Sbjct: 228 VKLYLLSA 235
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N + AV+ +A++AG+ A ++ + G+GV+ N+ +A +WYL+ AE G A N
Sbjct: 294 NLKTAVEWNRKAALAGNAEAITKMGIAYEEGKGVEQNMTDAVKWYLKGAELGNSDAQTNY 353
Query: 235 SLCYSFGEGLPLSHRQARKWMKRA 258
+ C G G+ ++ +A KW+++A
Sbjct: 354 AKCLLQGNGITQNYTEAIKWLEKA 377
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
E + Y AA+ G V A YN CY GEG+ ++ +A KW ++AA+ G AQ HGLG
Sbjct: 46 EEFQLYKDAAKAGDVDAQYNVGYCYENGEGVEQNYSEAAKWYRKAAEQGLSAAQ--HGLG 103
Query: 274 -LFTEGEMMK 282
L+ G+ +K
Sbjct: 104 YLYAYGQGVK 113
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
WN A + + G ++ G+GV +N+ A+ +LKGA G++ A +
Sbjct: 300 EWNRKAALAGNAEAITKMGIAYEEGKGVEQNMTDAVKWYLKGAELGNSDAQTN------- 352
Query: 150 MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
Y + + G+ Q N EA+K L +A + A L C G GV
Sbjct: 353 ----------YAKCLLQGNGITQ--NYTEAIKWLEKAVAQKNPIAINNLGFCYLNGFGVT 400
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSL 236
+L++A +++ +AA+ GY A N +
Sbjct: 401 ADLEKAEQYFQKAADMGYELAKENLKM 427
>gi|237748075|ref|ZP_04578555.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379437|gb|EEO29528.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 311
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQA 163
G + G GV K+ +KA F K A +G A GLMY + ++S R A
Sbjct: 108 GMLYSQGLGVAKDFEKAKYWFDKAAGQGFAPAQTLVGLMYAKGVGTAKSMSQAEKWLRLA 167
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+P AQ P + EA +LL +A++ G AQ L + G+GVD
Sbjct: 168 AKQGEPDAQTYLGLLYLDGTELPQDVGEAARLLKEAAVKGDPNAQSALGMMYFSGKGVDQ 227
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
++ E+ +W +AA G V A Y G G+ +AR W+++AA G AQ
Sbjct: 228 DMNESEKWLEKAAIAGNVDAQTFLGNLYYKGIGVAKDDTRARYWLQKAAIAGDPDAQ 284
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
++A L + + G+ +AQ L + G G+ N A RWY ++A+ A +
Sbjct: 50 KKAAPFLMKEAKKGNAKAQVCLGMMYQEGLGLKQNYMLARRWYEKSAKKNRADAQTFLGM 109
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
YS G G+ +A+ W +AA G AQ GL G+ T M +A +L LA +
Sbjct: 110 LYSQGLGVAKDFEKAKYWFDKAAGQGFAPAQTLVGLMYAKGVGTAKSMSQAEKWLRLAAK 169
Query: 293 AGETAA 298
GE A
Sbjct: 170 QGEPDA 175
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L + +G GV + ++A W+ +AA G+ A L Y+ G G S QA K
Sbjct: 103 AQTFLGMLYSQGLGVAKDFEKAKYWFDKAAGQGFAPAQTLVGLMYAKGVGTAKSMSQAEK 162
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETA 297
W++ AA G AQ GL L+ +G EL GE A
Sbjct: 163 WLRLAAKQGEPDAQTYLGL-LYLDGT--------ELPQDVGEAA 197
>gi|354594571|ref|ZP_09012610.1| hypothetical protein CIN_13060 [Commensalibacter intestini A911]
gi|353672247|gb|EHD13947.1| hypothetical protein CIN_13060 [Commensalibacter intestini A911]
Length = 256
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 54/222 (24%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G GV+KN+ KA++ K A G+ A G++Y E + E A Y++AA
Sbjct: 3 YSTGLGVQKNMQKAVEYLTKAAEHGNADAQFKLGVLYDEGNVFPQNSEKAFEYYKKAADQ 62
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ + E+A +L +A+ G AQY LA+ G+GV+ + Q
Sbjct: 63 GSIEAQYNLGWMYANGQGTTKDYEKAYELFQKAADEGLPAAQYSLAIMYWHGQGVEQDRQ 122
Query: 214 EAARWYLRAAEGGYVRA------------------------------------MYNTSLC 237
++ +Y +AA GY A +N ++
Sbjct: 123 KSIEYYEKAAAQGYPEAEANLGYFYKNGNEVTKDSFKAVELLQKAAAQGVPEAQFNLAMM 182
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y GEG+P + AR+W+++AAD G A+L G+ L+ G+
Sbjct: 183 YLDGEGIPQDYVAAREWLEKAADQGDKSAELNLGV-LYGNGQ 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N ++AV+ L +A+ G+ AQ++L + G N ++A +Y +AA+ G + A YN
Sbjct: 12 NMQKAVEYLTKAAEHGNADAQFKLGVLYDEGNVFPQNSEKAFEYYKKAADQGSIEAQYNL 71
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLE 288
Y+ G+G + +A + ++AAD G AQ HG G+ E + K++ Y E
Sbjct: 72 GWMYANGQGTTKDYEKAYELFQKAADEGLPAAQYSLAIMYWHGQGV--EQDRQKSIEYYE 129
Query: 289 LATRAGETAADHVKNVILQQLSATSRD 315
A G A+ + + ++D
Sbjct: 130 KAAAQGYPEAEANLGYFYKNGNEVTKD 156
>gi|220905150|ref|YP_002480462.1| Sel1 domain-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869449|gb|ACL49784.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 346
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAA-ISLYRQ 162
W G GV +N +A F K A +G +A + G +Y + K EAA I Y +
Sbjct: 104 WATALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDWYSR 163
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G +AQ + + +A +A+ H +AQ LA GRG
Sbjct: 164 AANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYA 223
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A +WY RAAE GY A YN Y G G+P + QA W ++AA+ AQ
Sbjct: 224 QDPAKAVQWYTRAAEQGYAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYS 283
Query: 270 HGLGLFTEG-----EMMKAVVYLELATRAGETAADHV 301
GL ++ +G + +A + LA + G+ A V
Sbjct: 284 LGL-MYDQGTGVPRNLSEANRWYNLAAKNGDPDARSV 319
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 90/229 (39%), Gaps = 28/229 (12%)
Query: 95 LRPLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
L+PL + A L G+ G+GV+KN +A + F A +G AM W
Sbjct: 53 LKPLVDGGNAEALYVMGRLILDGKGVKKNRTRAAEFFRLAAEKGDVSAMNS-----W--- 104
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
A L P N EA + +A+ G AQY L GRGV +
Sbjct: 105 -----------ATALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKD 153
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A WY RAA G A Y+ Y +G S +A W ++AA+ H KAQ
Sbjct: 154 EAAAIDWYSRAANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLA 213
Query: 272 LGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
++ EG + KAV + A G A + + +Q +D
Sbjct: 214 F-MYAEGRGYAQDPAKAVQWYTRAAEQGYAEAQYNLGFMYEQGRGVPQD 261
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV+LL G+ A Y + + G+GV N AA ++ AAE G V AM + +
Sbjct: 47 DEAVRLLKPLVDGGNAEALYVMGRLILDGKGVKKNRTRAAEFFRLAAEKGDVSAMNSWAT 106
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ G+G+P ++R+A +W ++AA+ G AQ G L+ G
Sbjct: 107 ALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGY-LYAHG 147
>gi|300115298|ref|YP_003761873.1| Sel1 domain-containing protein repeat-containing protein
[Nitrosococcus watsonii C-113]
gi|299541235|gb|ADJ29552.1| Sel1 domain protein repeat-containing protein [Nitrosococcus
watsonii C-113]
Length = 241
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 114 GRGVRKNLDK--ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAA 171
GR KN D AL F+ A +G A GLMY +
Sbjct: 38 GREAYKNQDYELALREFMPLAEQGDENAQFYMGLMY-------------------ANGYG 78
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P +AE A K + S V A++ L + ++G+ V ++++A W+ +AA G A
Sbjct: 79 LPKDAEAAEKWFEKFSKHLDVSAKFNLGIMYYQGKSVPQDIEKAIAWFKKAATEGDAEAQ 138
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVY 286
+N Y G +P +A KW + AA+ G +AQ G+ +++EG + ++A +
Sbjct: 139 FNLGFIYDNGNDIPQDREEALKWYREAANQGIVEAQNNLGV-MYSEGQGIAKDYVQAYFW 197
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+A + G+ A +++ + + ++ + A+ + W+
Sbjct: 198 FNVAAKQGDKNAAKIRDTLAKDMNTSQMAEAIRLTHEWQ 236
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 98 LREAMVLLRWGKR---------FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
LRE M L G + +G G+ K+ + A F K + A + G+MY
Sbjct: 51 LREFMPLAEQGDENAQFYMGLMYANGYGLPKDAEAAEKWFEKFSKHLDVSAKFNLGIMY- 109
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
Y+ +V P + E+A+ +A+ G AQ+ L G +
Sbjct: 110 -----------YQGKSV-------PQDIEKAIAWFKKAATEGDAEAQFNLGFIYDNGNDI 151
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ +EA +WY AA G V A N + YS G+G+ + QA W AA G A
Sbjct: 152 PQDREEALKWYREAANQGIVEAQNNLGVMYSEGQGIAKDYVQAYFWFNVAAKQGDKNA 209
>gi|303237422|ref|ZP_07323988.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
gi|302482372|gb|EFL45401.1| Sel1 repeat protein [Prevotella disiens FB035-09AN]
Length = 429
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 28/246 (11%)
Query: 87 VCKSWNDALRPLREAM------VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
+ +++ +AL+ R+A + G ++ G GV+ N+++AL FL+ A +G A
Sbjct: 183 IVQNYEEALKLYRQAAEQGYSESQYKLGVCYQKGTGVKANINEALKWFLRAAQQGYAPAQ 242
Query: 141 VDAGL---------------MYW--EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
D G ++W + ++E A ++Y A + + E A+
Sbjct: 243 NDYGTYFLDENNPKKDYPTALFWLHKAAEQENAQAMYNIAVSYENGWGVAQSLENAISWY 302
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A++AG A Q+ L GRGV + +A +W L+ AE G + +LC G+G
Sbjct: 303 RKAALAGDADAMLQMGLAYADGRGVKQSWTDATQWLLKGAEAGNAESQSYFALCLLQGKG 362
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG-ETAA 298
+ ++A KW+++A + G+ A G G E + KA Y + + G E A
Sbjct: 363 IATDAKKAVKWLEKAIEQGNAMAANNLGFCYLNGFGVEKDKEKAKYYFQKSAEMGYELAK 422
Query: 299 DHVKNV 304
++K +
Sbjct: 423 KNLKFI 428
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P E KL +I G +QY+LALC G GV N EA +WY ++AE G +A +
Sbjct: 40 PKTPAERKKLYESLAIMGDAVSQYKLALCYDDGIGVPQNYGEALKWYRKSAEQGVPQAQH 99
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
N Y+ G G+ + ++A KW ++AAD H AQ G
Sbjct: 100 NLGFMYALGNGVRQNWKEAAKWFQQAADQDHTLAQFALG 138
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 77/203 (37%), Gaps = 55/203 (27%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV +N +AL + K A +G A + G MY LG+
Sbjct: 69 YDDGIGVPQNYGEALKWYRKSAEQGVPQAQHNLGFMY-----------------ALGNGV 111
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL------------------ 212
Q N +EA K QA+ H AQ+ L C G GV+ N
Sbjct: 112 RQ--NWKEAAKWFQQAADQDHTLAQFALGSCYESGNGVEQNYVVAAKYFRAAAAKGLLPA 169
Query: 213 ------------------QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
+EA + Y +AAE GY + Y +CY G G+ + +A KW
Sbjct: 170 VNALASFYFEGTGIVQNYEEALKLYRQAAEQGYSESQYKLGVCYQKGTGVKANINEALKW 229
Query: 255 MKRAADCGHGKAQLEHGLGLFTE 277
RAA G+ AQ ++G E
Sbjct: 230 FLRAAQQGYAPAQNDYGTYFLDE 252
>gi|404493110|ref|YP_006717216.1| SEL1 repeat-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545174|gb|ABA88736.1| SEL1 repeat-containing protein [Pelobacter carbinolicus DSM 2380]
Length = 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEA 179
+ KA +L A +GS +A+ + G MY DK + P N++ A
Sbjct: 36 DFGKAYSLWLSAAKQGSVVAVYNIGTMY---DKGQGV----------------PQNSKRA 76
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
V L A+ G+V+AQY L + G+GV + EA +W AAE G+ Y
Sbjct: 77 VSLYQLAAEKGYVKAQYNLGVRYKEGQGVPQDYNEAVKWLRLAAEQGHASGQYLLGAMCC 136
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAG 294
G+G+ +++A KW++ AA+ GH Q G ++ G + +A +L LA G
Sbjct: 137 NGKGVLQDYKEAAKWLRLAAEQGHASGQYLLG-AMYCNGKGVLQDYKEAAKWLRLAAEQG 195
Query: 295 ETAADHV 301
H+
Sbjct: 196 HAGGQHI 202
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+GV +N +A+ + A +G A + G+ Y E D EA + R
Sbjct: 60 GTMYDKGQGVPQNSKRAVSLYQLAAEKGYVKAQYNLGVRYKEGQGVPQDYNEA-VKWLRL 118
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G + Q + +EA K L A+ GH QY L G+GV
Sbjct: 119 AAEQGHASGQYLLGAMCCNGKGVLQDYKEAAKWLRLAAEQGHASGQYLLGAMYCNGKGVL 178
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EAA+W AAE G+ + Y G+G+P +++A KW + AA+ G KAQL
Sbjct: 179 QDYKEAAKWLRLAAEQGHAGGQHILGTMYCNGKGVPQDYKEAAKWFRLAAEQGDAKAQLN 238
Query: 270 HGLGLFTEG 278
G L+ +G
Sbjct: 239 LGF-LYIQG 246
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G R+K G+GV ++ ++A+ A +G G M D KEAA L R
Sbjct: 96 GVRYKEGQGVPQDYNEAVKWLRLAAEQGHASGQYLLGAMCCNGKGVLQDYKEAAKWL-RL 154
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G + Q + +EA K L A+ GH Q+ L G+GV
Sbjct: 155 AAEQGHASGQYLLGAMYCNGKGVLQDYKEAAKWLRLAAEQGHAGGQHILGTMYCNGKGVP 214
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
+ +EAA+W+ AAE G +A N Y G G+ S+ A W
Sbjct: 215 QDYKEAAKWFRLAAEQGDAKAQLNLGFLYIQGLGVTQSNIDAYAW 259
>gi|397663782|ref|YP_006505320.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
gi|395127193|emb|CCD05383.1| TPR repeat protein [Legionella pneumophila subsp. pneumophila]
Length = 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G +Q + EA K +A+ G+ AQ + L G GV + +A W
Sbjct: 95 ------DTGKGVSQ--DFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFTW 146
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LGL G
Sbjct: 147 FKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLGLLYTG 204
Query: 279 E 279
+
Sbjct: 205 Q 205
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA +A+ + AQ L G+GV + EA +WY++AAE G A N
Sbjct: 67 NYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ KA + + A
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKA 186
Query: 291 TRAGETAADHVKNVIL--QQLSATSRDRA 317
G+ ++ ++ Q+ ++ D+A
Sbjct: 187 AEQGDEKGEYSLGLLYTGQEGGISADDKA 215
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W A+ L G + G+GV ++ +A ++K A +G+ +A + GLMY
Sbjct: 71 ARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMY 130
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
GD A A+ ++A +A+ G+ +AQ L G+G
Sbjct: 131 -----------------ATGDGVA--ASDDKAFTWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA 266
++++A WY +AAE G + Y+ L Y+ E G+ + A W +AA+ GH A
Sbjct: 172 TPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNA 231
Query: 267 Q 267
Q
Sbjct: 232 Q 232
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFTWFKKAAEQGYSKAQVNLGYQYM-MGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD + A+ + A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGISADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
D + +AA WY AAE G A G G+ ++QA W ++A G+ Q
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 269 EHGL----GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 304
+ G GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
>gi|440225478|ref|YP_007332569.1| peptidoglycan-binding domain-containing protein [Rhizobium tropici
CIAT 899]
gi|440036989|gb|AGB70023.1| peptidoglycan-binding domain-containing protein [Rhizobium tropici
CIAT 899]
Length = 1228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQY+LA +G GVD +L +A ++Y +AA G AM+N ++ Y+ G P +
Sbjct: 998 GYAPAQYRLASMYEKGNGVDRDLVKAKQYYEQAANQGNASAMHNLAVLYASGTAGPQDYN 1057
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNV 304
A W RAAD G +Q + L+ G ++ ++ + +A ++G+ A ++
Sbjct: 1058 SAANWFIRAADLGVSDSQFNLAI-LYARGNGVKQDLQESYKWFAIAAKSGDKDAAQKRDE 1116
Query: 305 ILQQLSATSRDRAMLVVDSWRAMPS 329
+ + + A VD W+ P+
Sbjct: 1117 VANAMKPADLENARAKVDLWKVQPA 1141
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----A 155
+ + L G R+ GRGV ++ +A + A +G A MY + + +
Sbjct: 963 DPVALFSIGARYTDGRGVAADMKQAASWYQLSADKGYAPAQYRLASMYEKGNGVDRDLVK 1022
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A Y QAA G+ A+A + +LY + AG D+N A
Sbjct: 1023 AKQYYEQAANQGN-----ASAMHNLAVLYASGTAGPQ----------------DYN--SA 1059
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
A W++RAA+ G + +N ++ Y+ G G+ +++ KW AA G A
Sbjct: 1060 ANWFIRAADLGVSDSQFNLAILYARGNGVKQDLQESYKWFAIAAKSGDKDA 1110
>gi|260753381|ref|YP_003226274.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552744|gb|ACV75690.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 599
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ G+ + ++ +A F K A +G A ++ G +Y++ D +AA +L+++ A
Sbjct: 353 KYYEGKEISQDFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAA-TLFQKTA 411
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
P AQ P + ++A+ L QA+ G AQ+ L G+ V N
Sbjct: 412 DQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFILGYHYGTGKIVPLN 471
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
L++AA WY +AA G +R N + Y G G+P + A W+++AA KA++ G
Sbjct: 472 LKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQAAKSDDIKAEINLG 531
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 132 AARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ-------------P 173
A +G A D L Y+E D K+AA +++AA GDP+A
Sbjct: 339 AEKGDKEAQYDFALKYYEGKEISQDFKQAAY-WFQKAADQGDPSATLNLGALYYDGKLGK 397
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +A L + + + +AQ L + RG GV + Q+A Y +AA G A +
Sbjct: 398 TDFSKAATLFQKTADQNYPKAQLFLGILYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 457
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 289
Y G+ +PL+ ++A W +AA G + Q+ G LG ++ A+ +L+
Sbjct: 458 LGYHYGTGKIVPLNLKKAASWYNKAAHAGSLRGQINLGIAYMLGAGVPKNILVAIYWLQQ 517
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
A ++ + A+ + L ++ A +++ + +D+
Sbjct: 518 AAKSDDIKAE----INLGKIYADPKNQEIFALDT 547
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G + +G V++N + + A G A + Y E D KE A + AA
Sbjct: 243 GAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSMFYQESDTLEDKEKAEFWLKTAA 302
Query: 165 VLGDPAAQ-----------PANAE---EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ GD AQ P +E + +KLL + + G AQY AL + G+ +
Sbjct: 303 LAGDKEAQKQVSILYTNKDPKISEIHPQIIKLLREKAEKGDKEAQYDFALKYYEGKEISQ 362
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++AA W+ +AA+ G A N Y G+ +A ++ AD + KAQL
Sbjct: 363 DFKQAAYWFQKAADQGDPSATLNLGALYYDGKLGKTDFSKAATLFQKTADQNYPKAQLFL 422
Query: 271 GLGLFTEGE-----MMKAVVYLELATRAGETAADHV 301
G+ L+ GE KA+ + A GE A +
Sbjct: 423 GI-LYERGEGVPQDTQKALSLYKQAANLGEAEAQFI 457
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVL 166
+ +G GV KN++K + + K G + G++YW D +E A+ +A
Sbjct: 102 YINGEGVPKNVEKGISWYKKAIQSGDIDSARRLGMLYWMGDDVPRDQEKALHWLENSANN 161
Query: 167 GD-PAAQ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD A+Q P + E+ + L +++ G V +Q LA + G+ + + +
Sbjct: 162 GDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQGGVISQEILADLYYSGQMLPLDKK 221
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+AA WY +AA+ A Y GE + + R W+++AA G +AQ +
Sbjct: 222 KAAYWYEQAAKEHNGSAAKMLGAIYYNGEDVKQNKELGRYWIEQAAKWGEPEAQRITSM- 280
Query: 274 LFTEGEMM----KAVVYLELATRAGETAA 298
+ E + + KA +L+ A AG+ A
Sbjct: 281 FYQESDTLEDKEKAEFWLKTAALAGDKEA 309
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GD P + A+ +A+ G A + L + G GV ++ +AA W+ +AA G
Sbjct: 31 GDVEGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGVPIDIAKAAYWFEKAANAG 90
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A + Y GEG+P + + W K+A G
Sbjct: 91 NWDAARRLATLYINGEGVPKNVEKGISWYKKAIQSG 126
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 23/200 (11%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVLGDPA 170
G+ K+ AL + + A G A GL+Y+ D I+ + +AA G+
Sbjct: 34 EGIPKDFHLALHWYQEAAKDGDKEAAQMIGLLYYNGDGVPIDIAKAAYWFEKAANAGNWD 93
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
A P N E+ + +A +G + + +L + G V + ++A
Sbjct: 94 AARRLATLYINGEGVPKNVEKGISWYKKAIQSGDIDSARRLGMLYWMGDDVPRDQEKALH 153
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
W +A G A S Y GE +P + W++++A G G E L+
Sbjct: 154 WLENSANNGDWDASQMLSRFYILGENIPFDKEKGLYWLEKSAKQG-GVISQEILADLYYS 212
Query: 278 GEMM-----KAVVYLELATR 292
G+M+ KA + E A +
Sbjct: 213 GQMLPLDKKKAAYWYEQAAK 232
>gi|265753706|ref|ZP_06089061.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
gi|423231363|ref|ZP_17217766.1| hypothetical protein HMPREF1063_03586 [Bacteroides dorei
CL02T00C15]
gi|423238520|ref|ZP_17219636.1| hypothetical protein HMPREF1065_00259 [Bacteroides dorei
CL03T12C01]
gi|423245952|ref|ZP_17227025.1| hypothetical protein HMPREF1064_03231 [Bacteroides dorei
CL02T12C06]
gi|263235420|gb|EEZ20944.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
gi|392628249|gb|EIY22282.1| hypothetical protein HMPREF1063_03586 [Bacteroides dorei
CL02T00C15]
gi|392637458|gb|EIY31326.1| hypothetical protein HMPREF1064_03231 [Bacteroides dorei
CL02T12C06]
gi|392648203|gb|EIY41893.1| hypothetical protein HMPREF1065_00259 [Bacteroides dorei
CL03T12C01]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------K 185
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + EEA +A+ + AQY + G G++ + + A+W +AA G
Sbjct: 186 NGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGN 245
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 246 APAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPK 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFLF 306
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q A E ++ + + A H AQY +G G + + +A + + ++A GG A
Sbjct: 48 QYEKARELLEKIARIDTAHH--AQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAE 105
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
N Y++G G+ + QA KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 106 NNIGFMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|345515304|ref|ZP_08794808.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
gi|229438003|gb|EEO48080.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------K 185
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + EEA +A+ + AQY + G G++ + + A+W +AA G
Sbjct: 186 NGLGVPQDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGN 245
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 246 APAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFLF 306
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 253 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|443724592|gb|ELU12527.1| hypothetical protein CAPTEDRAFT_96009 [Capitella teleta]
Length = 191
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A N EA +L AS G+ +A Y LA+C G+GV ++ +AA+ Y AA G ++
Sbjct: 11 ANKENYNEAFQLWEHASSKGYAKASYNLAICYETGKGVPQDMSQAAKLYHIAASQGCSKS 70
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG---EMMKAVVYL 287
+YN SL Y G G+ +A++ +++AA G +AQ E G+ ++TE +M KA
Sbjct: 71 LYNLSLMYMDGCGVTRDENKAKQLLEKAAASGLKQAQTELGV-IYTEHKHRDMQKAASLF 129
Query: 288 ELATRAGETAADHVKNVILQQ 308
A + ++AA + + +Q
Sbjct: 130 SWAAKQQDSAAQYYLGICYEQ 150
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD------KKEAAISLYRQAA 164
++ G+GV +++ +A + A++G + ++ + LMY MD + A L +AA
Sbjct: 42 YETGKGVPQDMSQAAKLYHIAASQGCSKSLYNLSLMY--MDGCGVTRDENKAKQLLEKAA 99
Query: 165 VLGDPAAQPA-----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ + ++A L A+ AQY L +C +G GV N
Sbjct: 100 ASGLKQAQTELGVIYTEHKHRDMQKAASLFSWAAKQQDSAAQYYLGICYEQGLGVPCNPC 159
Query: 214 EAARWYLRAAEGGYVRAMYN 233
+AA Y ++A GY+ A +N
Sbjct: 160 KAAELYRQSANAGYLSAYHN 179
>gi|294673103|ref|YP_003573719.1| hypothetical protein PRU_0335 [Prevotella ruminicola 23]
gi|294472071|gb|ADE81460.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
Length = 1106
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+GV KN A + + K A +G A + GL+Y E K
Sbjct: 878 GHMYEIGKGVEKNYVVAAEWYSKAAEQGDARAQYNLGLIY-EYGK--------------- 921
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+P N ++A++L A+ HV AQ QL + G+GV+ N ++A +AAEGGY
Sbjct: 922 --GIEP-NLDKAIELYRMAAEQSHVLAQNQLGVKYRLGQGVEQNGEKAFDLIYKAAEGGY 978
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
A N Y+ G G ++ +A +W K++A+ G+ KA L G +A+ +
Sbjct: 979 SVAQNNLGWMYANGCGTEQNYEKAIEWYKKSAENGYKKAYNGIAWTLHLSGRYEEALPWA 1038
Query: 288 ELATRA 293
E A A
Sbjct: 1039 EKAVAA 1044
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 86 LVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL 145
+V W +A G +++G+G+ NLDKA++ + A + LA G+
Sbjct: 892 VVAAEWYSKAAEQGDARAQYNLGLIYEYGKGIEPNLDKAIELYRMAAEQSHVLAQNQLGV 951
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y LG Q N E+A L+Y+A+ G+ AQ L G
Sbjct: 952 KY-----------------RLGQGVEQ--NGEKAFDLIYKAAEGGYSVAQNNLGWMYANG 992
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRA----MYNTSLCYSFGEGLPLSHR 249
G + N ++A WY ++AE GY +A + L + E LP + +
Sbjct: 993 CGTEQNYEKAIEWYKKSAENGYKKAYNGIAWTLHLSGRYEEALPWAEK 1040
>gi|237710057|ref|ZP_04540538.1| TPR repeat containing protein [Bacteroides sp. 9_1_42FAA]
gi|229456150|gb|EEO61871.1| TPR repeat containing protein [Bacteroides sp. 9_1_42FAA]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------K 185
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + EEA +A+ + AQY + G G++ + + A+W +AA G
Sbjct: 186 NGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGN 245
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 246 APAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPK 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFLF 306
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 177 EEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
E+A KLL + A I AQY +G G + + +A + + ++A GG A N
Sbjct: 50 EKARKLLEKIARIDTAHHAQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIG 109
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
Y++G G+ + QA KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 110 FMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|212693317|ref|ZP_03301445.1| hypothetical protein BACDOR_02829 [Bacteroides dorei DSM 17855]
gi|212664134|gb|EEB24706.1| Sel1 repeat protein [Bacteroides dorei DSM 17855]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------K 185
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + EEA +A+ + AQY + G G++ + + A+W +AA G
Sbjct: 186 NGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGN 245
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 246 APAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + A G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSATGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPK 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + KW+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAKWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G G E ++ +A + + A G A I LS + + L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSEKDTEDSFLF 306
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q A E ++ + + A H AQY +G G + + +A + + ++A GG A
Sbjct: 48 QYEKARELLEKIARIDTAHH--AQYLTGDMYLKGLGGEIDYDKALKLFHQSATGGNTYAE 105
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
N Y++G G+ + QA KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 106 NNIGFMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|254451995|ref|ZP_05065432.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
gi|198266401|gb|EDY90671.1| Sel1 domain protein repeat-containing protein [Octadecabacter
arcticus 238]
Length = 455
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 100/251 (39%), Gaps = 38/251 (15%)
Query: 78 LPQLRAASLVC--KSWNDALRPLREAMVL---LRWGKRFKHGRGVRKNLDKALDSFLKGA 132
L A V K W RPL E + +G+ F +G GV + ++A+ F A
Sbjct: 9 LAAYDAGDFVTALKEW----RPLAEQGDVDAQYNFGRLFDNGEGVLLDDEEAVRWFRLAA 64
Query: 133 ARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQAAVLGDPAAQPA-----NAEEAV 180
+G A G+MY D E AI YR AA GD AQ N V
Sbjct: 65 EQGHARAQNTLGVMY---DYGEGVIQDDAKAIRWYRLAAEQGDARAQSNLGGSYNNGNGV 121
Query: 181 KLLYQ--------ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
Y A+ GH AQ L G GV + EAA WY AAE G A
Sbjct: 122 VQDYAVAANWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQT 181
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYL 287
N Y+ G G+ + +A KW + AA+ GH AQ G ++ G + +A +
Sbjct: 182 NLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGF-MYDNGNGVMQDYSEAANWY 240
Query: 288 ELATRAGETAA 298
LA GE A
Sbjct: 241 RLAAEQGEANA 251
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA G + +G GV ++ +A + A +G A + G MY D E
Sbjct: 176 EANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSE 235
Query: 155 AAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALC 201
AA + YR AA G+ AQ + EA K A+ G AQ L
Sbjct: 236 AA-NWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNLGFM 294
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV + EAA WY AAE G A N Y+ G G+ + +A KW + AA+
Sbjct: 295 YDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQ 354
Query: 262 GHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAA 298
GH AQ G ++ G + +A + LA GE A
Sbjct: 355 GHANAQTNLGF-MYDNGNGVMQDYSEAANWYRLAAEQGEANA 395
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV ++ A + + A +G A + G MY D EAA + YR
Sbjct: 112 GGSYNNGNGVVQDYAVAANWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAA-NWYRL 170
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ + EA K A+ GH AQ L G GV
Sbjct: 171 AAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGFMYDNGNGVM 230
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EAA WY AAE G A N Y+ G G+ + +A KW + AA+ G AQ
Sbjct: 231 QDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGEANAQTN 290
Query: 270 HGLGLFTEG-----EMMKAVVYLELATRAGETAA 298
G ++ G + +A + LA GE A
Sbjct: 291 LGF-MYDNGNGVMQDYSEAANWYRLAAEQGEANA 323
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA G + +G GV ++ +A + A +G A + G MY D E
Sbjct: 248 EANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNLGFMYDNGNGVMQDYSE 307
Query: 155 AAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALC 201
AA + YR AA G+ AQ + EA K A+ GH AQ L
Sbjct: 308 AA-NWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQGHANAQTNLGFM 366
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV + EAA WY AAE G A N Y+ G G+ + +A KW + AA+
Sbjct: 367 YDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAAKWYRLAAEQ 426
Query: 262 GHGKAQLEHGLGLFTEG 278
G AQ G ++ G
Sbjct: 427 GEANAQTNLG-NMYNNG 442
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 68/173 (39%), Gaps = 19/173 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA G + +G GV ++ +A + + A +G A + G MY D E
Sbjct: 284 EANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAE 343
Query: 155 AAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALC 201
AA YR AA G AQ + EA A+ G AQ L
Sbjct: 344 AA-KWYRLAAEQGHANAQTNLGFMYDNGNGVMQDYSEAANWYRLAAEQGEANAQTNLGNM 402
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
+ G GV + EAA+WY AAE G A N Y+ G G+ + +A W
Sbjct: 403 YNNGNGVVQDYAEAAKWYRLAAEQGEANAQTNLGNMYNNGNGVVQDYAEAANW 455
>gi|328773958|gb|EGF83995.1| hypothetical protein BATDEDRAFT_8526, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 224
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQ 162
G + G G ++++ A + K A S A+ + G +Y E+ + A +Y++
Sbjct: 15 GVMLEFGLGRKRDMPNATKWYRKAAEGKSAEALNNLGRLY-ELGRGCQVSHVLATEMYKR 73
Query: 163 AAVLG--DPAAQPANAEE-----------AVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG D A E AV+L A+ G+ RAQ L C +RGRG+
Sbjct: 74 AAKLGHLDGITNYAFMIENGLGVAQDLRMAVELYRSAADMGYARAQNALGSCYYRGRGIR 133
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA WY AA+ G+ A N +CY G G+ + A+ + ++AAD H
Sbjct: 134 RDHTEAVIWYRAAADQGFPPAQNNLGICYEEGNGIGKDNIMAKAYYQKAADLRHPSGTNN 193
Query: 270 HGLGLFTEGEMMKAVVYLELATRAG 294
G L TEG+ + A+ Y +A G
Sbjct: 194 LGYMLLTEGDYIAAMQYFHVALSLG 218
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L + L G G ++ A +WY +AAEG A+ N Y G G +SH A + KR
Sbjct: 14 LGVMLEFGLGRKRDMPNATKWYRKAAEGKSAEALNNLGRLYELGRGCQVSHVLATEMYKR 73
Query: 258 AADCGHGKA------QLEHGLGL 274
AA GH +E+GLG+
Sbjct: 74 AAKLGHLDGITNYAFMIENGLGV 96
>gi|237746366|ref|ZP_04576846.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377717|gb|EEO27808.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 538
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 30/263 (11%)
Query: 55 STEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHG 114
+ +GH A +L RAASL+ + + + + LL + G
Sbjct: 187 ADQGHLKAQAKLGILYMEGRGVKRDDARAASLLSNAARHGIAVAQANLGLL-----YASG 241
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDP 169
RGV + +KAL+ + K A++G A G MY E D +AA+ YR+AA G+
Sbjct: 242 RGVAASTNKALEWYRKAASQGEAGAQFSLGNMYEDGTGVEKDLVKAAV-WYRKAAEQGNA 300
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ + +EA +A+ G AQ L + G GVD ++++A
Sbjct: 301 EAQNNLGRLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNLGVLYAYGLGVDQDVEKAV 360
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
WY +AAE G + + Y GEG+ R A KW + AA G ++Q GL ++T
Sbjct: 361 YWYRQAAEQGQPEGAFFLAEAYYRGEGVGRDDRLAVKWYEFAAKQGVPESQDRLGL-MYT 419
Query: 277 EG-----EMMKAVVYLELATRAG 294
G + KAV + A R G
Sbjct: 420 NGIGVKQDYGKAVSWFRKAARQG 442
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G+ ++ G GV +N KA + K A +G A G++Y E + + +A A SL A
Sbjct: 163 GELYEAGEGVERNDKKAAFWYQKAADQGHLKAQAKLGILYMEGRGVKRDDARAASLLSNA 222
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ A+ +A++ +A+ G AQ+ L G GV+
Sbjct: 223 ARHGIAVAQANLGLLYASGRGVAASTNKALEWYRKAASQGEAGAQFSLGNMYEDGTGVEK 282
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+L +AA WY +AAE G A N Y G+ +A W +RAAD G +AQ
Sbjct: 283 DLVKAAVWYRKAAEQGNAEAQNNLGRLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNL 342
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGE 295
G+ GL + ++ KAV + A G+
Sbjct: 343 GVLYAYGLGVDQDVEKAVYWYRQAAEQGQ 371
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAAQPA 174
K DKA SF K AA+G A G MY+ + E AA Y++AA G AQ A
Sbjct: 102 KEYDKAFSSFKKAAAKGHAAAQSALGAMYYNGEGTEENESAAAQWYQKAAEHGRMDAQFA 161
Query: 175 NAE-----EAVK-------LLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
E E V+ YQ A+ GH++AQ +L + GRGV + AA
Sbjct: 162 LGELYEAGEGVERNDKKAAFWYQKAADQGHLKAQAKLGILYMEGRGVKRDDARAASLLSN 221
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLF 275
AA G A N L Y+ G G+ S +A +W ++AA G AQ E G G+
Sbjct: 222 AARHGIAVAQANLGLLYASGRGVAASTNKALEWYRKAASQGEAGAQFSLGNMYEDGTGV- 280
Query: 276 TEGEMMKAVVYLELATRAGETAADH 300
E +++KA V+ A G A +
Sbjct: 281 -EKDLVKAAVWYRKAAEQGNAEAQN 304
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G+ + G + D+A F + A +G A + G++Y +D+ E A+ YRQA
Sbjct: 307 GRLYMEGDDFEGHEDEAFVWFQRAADQGFAEAQTNLGVLYAYGLGVDQDVEKAVYWYRQA 366
Query: 164 AVLGDPAAQPANAEE-------------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P AE AVK A+ G +Q +L L G GV
Sbjct: 367 AEQGQPEGAFFLAEAYYRGEGVGRDDRLAVKWYEFAAKQGVPESQDRLGLMYTNGIGVKQ 426
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A W+ +AA GY + N + ++ G G+ + +A W ++A +AQ
Sbjct: 427 DYGKAVSWFRKAARQGYAESQNNLGVLHARGLGVEQDYARAIAWYRKAIAQNLPQAQFNL 486
Query: 271 G 271
G
Sbjct: 487 G 487
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G GV ++++KA+ + + A +G Y+ + A+ Y A
Sbjct: 343 GVLYAYGLGVDQDVEKAVYWYRQAAEQGQPEGAFFLAEAYYRGEGVGRDDRLAVKWYEFA 402
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P +Q + +AV +A+ G+ +Q L + RG GV+
Sbjct: 403 AKQGVPESQDRLGLMYTNGIGVKQDYGKAVSWFRKAARQGYAESQNNLGVLHARGLGVEQ 462
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ A WY +A +A +N Y G G+ ARKW +AA G
Sbjct: 463 DYARAIAWYRKAIAQNLPQAQFNLGTMYLQGHGVRQDVDMARKWFMKAASQG 514
>gi|256424715|ref|YP_003125368.1| Sel1 domain-containing protein repeat-containing protein
[Chitinophaga pinensis DSM 2588]
gi|256039623|gb|ACU63167.1| Sel1 domain protein repeat-containing protein [Chitinophaga
pinensis DSM 2588]
Length = 211
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +G GV+++ A ++K A +G + + G Y E GD
Sbjct: 60 YDNGMGVQRDTAIAFKWYMKAALQGHMESQYNVGFFYRE-----------------GDVV 102
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q N ++AV AS G AQ L C G G++ ++ +A WY +AA +A
Sbjct: 103 RQ--NDKKAVYWFKLASAQGDTEAQRDLGYCYFYGLGIEKDVTQAIFWYKKAAAKDDPKA 160
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+YN LCY G+G+ S R A+ + +RAA G+ A L+
Sbjct: 161 LYNLGLCYKHGDGVGQSQRWAKYYFERAARLGNNAASLQ 199
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ ++Q ++ + V L + A+ G+ RAQ+ LA C G GV + A +WY++AA G+
Sbjct: 26 ETSSQRSSWRQIVMLWFSAASQGNKRAQFYLATCYDNGMGVQRDTAIAFKWYMKAALQGH 85
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKA 283
+ + YN Y G+ + + ++A W K A+ G +AQ + G GL E ++ +A
Sbjct: 86 MESQYNVGFFYREGDVVRQNDKKAVYWFKLASAQGDTEAQRDLGYCYFYGLGIEKDVTQA 145
Query: 284 VVYLELA 290
+ + + A
Sbjct: 146 IFWYKKA 152
>gi|189502271|ref|YP_001957988.1| hypothetical protein Aasi_0892 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497712|gb|ACE06259.1| hypothetical protein Aasi_0892 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1877
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAISLYRQA 163
+ +G G++++ +A K A +G A + G MY W+ DKK Y++
Sbjct: 487 YANGLGIKQDYTRAKGWLEKAAEQGHRAAQFNLGWMYYHGQGVKWD-DKKPKVCYQYKKE 545
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRA 222
A D V AQY+L + + + +D + ++A W+ +A
Sbjct: 546 AEQVD-----------------------VEAQYKLGVKYYNAKKNIDVDYEKAVAWFKKA 582
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEG 278
A+ +V A Y Y +GL S+++A KW ++AA GH +AQ G L +
Sbjct: 583 AKQNHVDAQYRIGWMYHHAQGLDQSYKKAIKWYEKAATRGHKEAQYNLGFIYDNKLGGQQ 642
Query: 279 EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
++MKA+V+ A+ G+T+ + ++ + +RD
Sbjct: 643 DVMKAIVWYAKASEQGQTSVQNNLGIMDYKGEGVARD 679
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G + H +G+ ++ KA+ + K A RG A + G +Y D K L Q V
Sbjct: 593 RIGWMYHHAQGLDQSYKKAIKWYEKAATRGHKEAQYNLGFIY---DNK-----LGGQQDV 644
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+ +A+ +AS G Q L + ++G GV + +AA WY +AA
Sbjct: 645 M-----------KAIVWYAKASEQGQTSVQNNLGIMDYKGEGVARDYLKAAAWYEKAANQ 693
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
G V A Y Y+ G G+ + A W K+A H +Q + G + + + KA+
Sbjct: 694 GLVEAQYELGTIYANGLGVEQDYMNAITWFKKATQQEHAPSQNKLGWIYYDQKDYTKAIT 753
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
+ + A + A + I Q + +D +V
Sbjct: 754 WFKKAAKQNHVNAQYNLGWIYQYIKDVGKDYEKAIV 789
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQAAVL 166
+++G+GV +N KA+ + K A +G A + G +Y +D+ + A + +AA+
Sbjct: 178 YENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLGWIYQNSLGVDQDYQKARGWFEKAAIQ 237
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ + +A + +A++ G AQY+L GV + +
Sbjct: 238 RHAGAQYNLGCMYKDKLGVAQDYAKAREWFEKAAVQGVADAQYKLGSLYQNSLGVAQDYK 297
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 267
+A W+ AA + RA N Y G G+ + +AR+W K+AAD GH AQ
Sbjct: 298 KAREWFEEAAAQRHARAQNNLGFLYQHGLGMNQDYEKAREWFKKAADQGHAHAQYNLGFL 357
Query: 268 LEHGLGL 274
+HGLG+
Sbjct: 358 YQHGLGM 364
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G++ AQY +A G+GVD N Q+A +WY +AA G+ A YN Y G+ ++
Sbjct: 166 GYIDAQYNVASMYENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLGWIYQNSLGVDQDYQ 225
Query: 250 QARKWMKRAADCGHGKAQLEHG 271
+AR W ++AA H AQ G
Sbjct: 226 KARGWFEKAAIQRHAGAQYNLG 247
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y A++ + N ++A+K +A+ GH AQY L GVD + Q+A W+
Sbjct: 172 YNVASMYENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLGWIYQNSLGVDQDYQKARGWF 231
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+AA + A YN Y G+ + +AR+W ++AA G AQ + G
Sbjct: 232 EKAAIQRHAGAQYNLGCMYKDKLGVAQDYAKAREWFEKAAVQGVADAQYKLG 283
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAAR---GSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
G ++HG G+ ++ KA + + K A + G+ + D L+ E K E A + QA
Sbjct: 355 GFLYQHGLGMNQDYTKAKEWYKKAAEKEHAGAERMLKD--LIEEEKIKDEQAEKDFLQAI 412
Query: 165 VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
PAN + L + A ++ AQY + + +GV+ + + Y +AA
Sbjct: 413 QGFQILDNPANPRDINPLHKESADQIENINAQYNVISMCEKEKGVEKDYGKERERYEKAA 472
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
E G + A Y + Y+ G G+ + +A+ W+++AA+ GH AQ G ++ G+ +K
Sbjct: 473 EQGDIEAQYELGIIYANGLGIKQDYTRAKGWLEKAAEQGHRAAQFNLGW-MYYHGQGVK 530
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A+ GY+ A YN + Y G+G+ ++++A KW +AA+ GH +AQ G
Sbjct: 161 KDADHGYIDAQYNVASMYENGKGVDQNYQKAIKWYTKAANKGHAEAQYNLG 211
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G + AQY+L + G G+ + A W +AAE G+ A +N Y G+G+
Sbjct: 470 KAAEQGDIEAQYELGIIYANGLGIKQDYTRAKGWLEKAAEQGHRAAQFNLGWMYYHGQGV 529
Query: 245 PLSHRQAR--KWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETA 297
++ + K+ A+ +AQ + G+ + + + KAV + + A +
Sbjct: 530 KWDDKKPKVCYQYKKEAEQVDVEAQYKLGVKYYNAKKNIDVDYEKAVAWFKKAAKQNHVD 589
Query: 298 ADH 300
A +
Sbjct: 590 AQY 592
>gi|332527784|ref|ZP_08403823.1| Sel1 domain-containing protein [Rubrivivax benzoatilyticus JA2]
gi|332112180|gb|EGJ12156.1| Sel1 domain-containing protein [Rubrivivax benzoatilyticus JA2]
Length = 526
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
+A+ +G+ +G GV+K++ A F K A +G A + W ++ +
Sbjct: 161 DAIAQRNFGRLLFNGSGVKKDVAAAAGWFRKSADQGDADAQ---NWIGWMSERGQGLPQD 217
Query: 156 ---AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA 199
A+ YR AA G AQ + E+A +A+ G RAQY L
Sbjct: 218 YVQAVVWYRYAAEQGLAMAQANLGVLLASGLGVTKDPEQAAAWYRKAAEQGEPRAQYLLG 277
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ L G GV + EA WY +AAE G RA + + Y+ GEG+ S R+A W +AA
Sbjct: 278 VALAGGDGVAKDAHEAVVWYRKAAEQGRARAQFKLAYAYASGEGVEKSPREAAAWYLKAA 337
Query: 260 DCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAG 294
+ G AQ GL L+ G+ ++ A + EL+ R G
Sbjct: 338 EQGDSDAQNNLGL-LYELGDGVRQDASEAARWYELSARQG 376
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 25/238 (10%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLG 167
+ G+G+ ++ +A+ + A +G +A + G++ E A + YR+AA G
Sbjct: 209 ERGQGLPQDYVQAVVWYRYAAEQGLAMAQANLGVLLASGLGVTKDPEQAAAWYRKAAEQG 268
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
+P AQ +A EAV +A+ G RAQ++LA G GV+ + +E
Sbjct: 269 EPRAQYLLGVALAGGDGVAKDAHEAVVWYRKAAEQGRARAQFKLAYAYASGEGVEKSPRE 328
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA WYL+AAE G A N L Y G+G+ +A +W + +A G+ Q L +
Sbjct: 329 AAAWYLKAAEQGDSDAQNNLGLLYELGDGVRQDASEAARWYELSARQGNAWGQRNIAL-M 387
Query: 275 FTEGEMM-----KAVVYLELATRAGETAADHV--KNVILQQLSATSRDRAMLVVDSWR 325
+GE + +A +L LA A D +N + +LS + +W+
Sbjct: 388 LRDGEGLPASPIQAYAWLNLAASADTPHPDAAEERNALAARLSKAQLQDGQRLARAWK 445
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
YQ ++AG Y +C+ R R ++AA WY +AA G+ + Y + Y GEG
Sbjct: 56 YQNALAGA----YYDGVCVQRSR------EDAAAWYRKAALQGHGASQYGVAYLYVKGEG 105
Query: 244 LPLSHRQARKWMKRAADCGH 263
LP + QA W ++AAD GH
Sbjct: 106 LPQDYAQAASWFRKAADQGH 125
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 153 KEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA 199
+E A + YR+AA+ G A+Q P + +A +A+ GH+ A +
Sbjct: 74 REDAAAWYRKAALQGHGASQYGVAYLYVKGEGLPQDYAQAASWFRKAADQGHLAAGNWIG 133
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+G GV ++ EA+RWY AAE G A N G G+ A W +++A
Sbjct: 134 WLHEQGLGVQKSVGEASRWYRWAAERGDAIAQRNFGRLLFNGSGVKKDVAAAAGWFRKSA 193
Query: 260 DCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 313
D G AQ E G GL + ++AVV+ A G A V+L +
Sbjct: 194 DQGDADAQNWIGWMSERGQGLPQ--DYVQAVVWYRYAAEQGLAMAQANLGVLLASGLGVT 251
Query: 314 RD 315
+D
Sbjct: 252 KD 253
>gi|93007054|ref|YP_581491.1| hypothetical protein Pcryo_2230 [Psychrobacter cryohalolentis K5]
gi|92394732|gb|ABE76007.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 264
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GVR++L KA+ K A +G+ A+ G+M+ + + +A Y Q+A G P+
Sbjct: 51 YYGGTGVRQDLPKAIQWAEKPARQGNAEALFVMGMMHTQKNDTKA-FEFYLQSANQGYPS 109
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ + +A + + +A+ G+ AQY+L+L +G GV + +A
Sbjct: 110 AQNMVGLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMYEKGIGVKQDNAKAFE 169
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
WYL++A G +A N Y G G+ + +A +W R+A G +AQ G
Sbjct: 170 WYLKSANQGNAQAQSNLGAMYDQGIGVQQDYAKAFEWYTRSASQGDARAQFNLG 223
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
P + MV G +K GRGV+++ KA + K A +G A + LMY E
Sbjct: 108 PSAQNMV----GLSYKEGRGVQQDYTKAFEWIQKAANQGYPSAQYELSLMY------EKG 157
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
I + + A +A + +++ G+ +AQ L +G GV + +A
Sbjct: 158 IGVKQDNA-------------KAFEWYLKSANQGNAQAQSNLGAMYDQGIGVQQDYAKAF 204
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
WY R+A G RA +N Y FG+G+ +AR W+ ++ G
Sbjct: 205 EWYTRSASQGDARAQFNLGRMYHFGKGVQQDDAKARDWLGKSCKNG 250
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 31/126 (24%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW------------------- 218
++ KL+ + + G RAQ LA+ + G GV +L +A +W
Sbjct: 27 DSFKLMERLASQGDARAQINLAMMYYGGTGVRQDLPKAIQWAEKPARQGNAEALFVMGMM 86
Query: 219 ------------YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
YL++A GY A L Y G G+ + +A +W+++AA+ G+ A
Sbjct: 87 HTQKNDTKAFEFYLQSANQGYPSAQNMVGLSYKEGRGVQQDYTKAFEWIQKAANQGYPSA 146
Query: 267 QLEHGL 272
Q E L
Sbjct: 147 QYELSL 152
>gi|254514665|ref|ZP_05126726.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium NOR5-3]
gi|219676908|gb|EED33273.1| Sel1 domain protein repeat-containing protein [gamma
proteobacterium NOR5-3]
Length = 199
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 158 SLYRQA-AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
S++ QA V+G A + + A+ + A+ G QY L G GV + + A
Sbjct: 19 SVWTQADTVMGFQAYMDGDYQSALAIFSSAAEEGDAVGQYGLGAMYRDGDGVPQDYKAAV 78
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGL 272
RWY AAE G A Y+ + YS G+G+P S + A +W AA+ G KAQ +GL
Sbjct: 79 RWYTAAAEQGLALAQYDLGVMYSEGKGVPQSDKAAVRWYTPAAEQGLAKAQNNLAAMYGL 138
Query: 273 GLFTEGEMMKAVVYLEL-ATRAGETAADHVKNVILQQLS 310
G + + A ++ + A+ +GE+A +++++ +Q+S
Sbjct: 139 GRGVPQDFVYAYMWSNIAASISGESATKSLRDIVARQMS 177
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A+ Y A+ D P + + AV+ A+ G AQY L + G+GV + + A
Sbjct: 54 AVGQYGLGAMYRDGDGVPQDYKAAVRWYTAAAEQGLALAQYDLGVMYSEGKGVPQSDKAA 113
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
RWY AAE G +A N + Y G G+P A W AA
Sbjct: 114 VRWYTPAAEQGLAKAQNNLAAMYGLGRGVPQDFVYAYMWSNIAA 157
>gi|393786768|ref|ZP_10374900.1| hypothetical protein HMPREF1068_01180 [Bacteroides nordii
CL02T12C05]
gi|392658003|gb|EIY51633.1| hypothetical protein HMPREF1068_01180 [Bacteroides nordii
CL02T12C05]
Length = 828
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 105 LRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G + +G G ++ +A++ + K A G+ LAM+ G Y ++ DK E A +
Sbjct: 606 FKMGDYYFYGYGPCLEDNKQAVEWYEKAIANGNALAMLRLGEYYLYDYDKLNESEKAFTY 665
Query: 160 YRQAAV-------------LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
++QAA +G + N EA K A+ G+ + Y+ LC + G
Sbjct: 666 FKQAAEQEFYNEGIGICYEMGIGVEE--NETEAFKYYTLAANNGNTMSMYRTGLCHYNGV 723
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV NLQEA RW+ AA + A Y +GEG + +W+++AA+ G KA
Sbjct: 724 GVKQNLQEAFRWFNDAAGNENIHACYYVGKMLMYGEGCTPNPENGLQWLQKAAEAGSDKA 783
Query: 267 QLEHG 271
Q E G
Sbjct: 784 QFELG 788
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA-------------VLGDP 169
K+ + + K AA+GS A+V+ G + E A L+ +AA L +
Sbjct: 448 KSKEYYEKAAAQGSPYALVELGFLQENEQNYEQAFELFSKAAEQEYPYGMYRVGYYLSEG 507
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A EE +A+ AG A + + C G GV+ + +A WY + E R
Sbjct: 508 IKGDAQPEEGAAWYLKAAEAGDTDAMFAMGRCYKNGYGVEEDPDKALAWYQKGEEKEDPR 567
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y G G+ + +A ++M +AA+ +G AQ + G F
Sbjct: 568 CITELGLAYENGYGVEENPHKAVEYMTKAAELNYGYAQFKMGDYYF 613
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 113 HGRGV---RKNLDKALDSFLKGAARGSTLAMVDAGLM----YWEMDKKEAAISLYRQAAV 165
+ RG+ + +KAL+ + K AA + A L Y + + + Y +AA
Sbjct: 399 YERGILSENPDYEKALEYYEKSAALENNDGYCRAALYLANGYAGITDEAKSKEYYEKAAA 458
Query: 166 LGDPAA---------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
G P A N E+A +L +A+ + Y++ L G D +E A
Sbjct: 459 QGSPYALVELGFLQENEQNYEQAFELFSKAAEQEYPYGMYRVGYYLSEGIKGDAQPEEGA 518
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL---- 272
WYL+AAE G AM+ CY G G+ +A W ++ + + E GL
Sbjct: 519 AWYLKAAEAGDTDAMFAMGRCYKNGYGVEEDPDKALAWYQKGEEKEDPRCITELGLAYEN 578
Query: 273 GLFTEGEMMKAVVYLELATRAGE 295
G E KAV Y+ T+A E
Sbjct: 579 GYGVEENPHKAVEYM---TKAAE 598
>gi|29612522|gb|AAH49959.1| Sel1l protein [Mus musculus]
Length = 569
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 162 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 221
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 222 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 281
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+++ A++GG++ A YN + ++ G G+ S A + K + G +L +
Sbjct: 282 LKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSY 341
Query: 276 TEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ + AVV YL LA + E A + IL Q AT
Sbjct: 342 KDEDYNAAVVQYLLLAEQGYEVAQSNAA-FILDQREAT 378
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 37 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHYRLV 96
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 97 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 156
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 157 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 216
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 217 ADMGNPVGQ--SGLGM 230
>gi|56550922|ref|YP_161761.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542496|gb|AAV88650.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 315
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EA 155
+A LL G + G+GV KN KA+ K A + A G +Y D E
Sbjct: 126 DAQTLL--GAAYHMGQGVPKNDQKAIFWLQKAADQAFPQAQNFLGEVYETGDPAVRNIEK 183
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
AIS Y++AA AQ P N E++ +A++ G + Q+ L
Sbjct: 184 AISWYQRAAEGNSVTAQAHLGMAYHEGTKLPKNYEKSTFWFKKAALQGDDQGQFFYGLAC 243
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV N +EA W+ +AA+ G ++A L Y+ GEG+P S +A W+++AA G
Sbjct: 244 LKGEGVAKNPREAVSWFQKAADQGNLQATTRLGLAYASGEGVPASKEKAVFWLRKAAGQG 303
Query: 263 HGKAQ 267
AQ
Sbjct: 304 EPNAQ 308
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKK------EA 155
G ++ G G+ KN +KA+ + K A +G+ A G Y + D+K +A
Sbjct: 96 GNAYQQGVGLPKNQEKAIFWYQKAADQGNLDAQTLLGAAYHMGQGVPKNDQKAIFWLQKA 155
Query: 156 AISLYRQAAVL-------GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
A + QA GDPA + N E+A+ +A+ V AQ L + H G +
Sbjct: 156 ADQAFPQAQNFLGEVYETGDPAVR--NIEKAISWYQRAAEGNSVTAQAHLGMAYHEGTKL 213
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +++ W+ +AA G + + L GEG+ + R+A W ++AAD G+ +A
Sbjct: 214 PKNYEKSTFWFKKAALQGDDQGQFFYGLACLKGEGVAKNPREAVSWFQKAADQGNLQATT 273
Query: 269 EHGLGLFTEGEMM-----KAVVYLELATRAGETAADHV 301
GL + GE + KAV +L A GE A +
Sbjct: 274 RLGLA-YASGEGVPASKEKAVFWLRKAAGQGEPNAQRI 310
>gi|46446343|ref|YP_007708.1| hypothetical protein pc0709 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399984|emb|CAF23433.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 309
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 27/198 (13%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
+G R+ +G+GV ++ +A F A + A G MY
Sbjct: 116 FGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYEN----------------- 158
Query: 167 GDPAAQP-ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
G AQ NA + +L A+ HV+AQY L + G+GV + QEAAR+Y AA+
Sbjct: 159 GQGVAQSDQNAAQCYQL---AANQNHVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQ 215
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---- 281
G+ +A ++ Y+ G+G+ S ++A K+ +RAA G+ AQ G+ +++ G +
Sbjct: 216 GHAKAQFSLGFIYAHGKGVEQSDQKAVKYYQRAAKQGNASAQCNLGV-MYSSGRGVPQSD 274
Query: 282 -KAVVYLELATRAGETAA 298
+A Y +LA G+ A
Sbjct: 275 QEAARYYQLAADQGDLIA 292
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
VKLL + G ++QY L G+GV + QEA +++ AA Y A Y+ Y
Sbjct: 101 VKLL---ADQGDAKSQYLFGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYE 157
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAG 294
G+G+ S + A + + AA+ H KAQ G+ ++ G+ + +A Y +LA + G
Sbjct: 158 NGQGVAQSDQNAAQCYQLAANQNHVKAQYNLGV-MYMHGQGVAQSDQEAARYYQLAAKQG 216
Query: 295 ETAA 298
A
Sbjct: 217 HAKA 220
>gi|402466818|gb|EJW02237.1| hypothetical protein EDEG_03321 [Edhazardia aedis USNM 41457]
Length = 587
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE 154
+ + + G ++ G+G KNL A + + K A G+ G Y E +K +
Sbjct: 199 MHDPVATYNLGYCYEEGKGTEKNLQYAFEWYKKAAEMGNAFGQNSLGFCYEEGIGTEKNQ 258
Query: 155 A-AISLYRQAAVLGDPAAQP----------ANAEEAV--KLLYQ-ASIAGHVRAQYQLAL 200
A A+ LY +A G P AQ A++ V L Y+ A+ G RAQ+ L
Sbjct: 259 AIALQLYMMSAEQGYPWAQSNLAYCYQKGIGTAKDYVLSCLWYKKAAYQGLSRAQHNLGH 318
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
C +G GV + ++A WYL+AAE V A ++ C+ G+G+P + ++A K+
Sbjct: 319 CYQQGLGVKKDKKQAVLWYLKAAEQNNVYAFHSLGNCFQNGDGVPKNEKEAVKY 372
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 25/242 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEAAISLYRQAA 164
G ++ G GV+K+ +A+ +LK A + + A G + D K E Y A
Sbjct: 317 GHCYQQGLGVKKDKKQAVLWYLKAAEQNNVYAFHSLGNCFQNGDGVPKNEKEAVKYYMLA 376
Query: 165 V----------------LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
V LG N E + + +A+ + AQ LA G G
Sbjct: 377 VRENFVPSLISLSFCYRLG--TGVDVNPEMSFNYMLKAACLNNSYAQNCLAFFFEEGFGT 434
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N+QEA +WY ++AE A N Y G+ + ++ +A + AA+ GH +A
Sbjct: 435 PVNIQEAIKWYEKSAEQNNPWAQCNLGCIYFEGQEVTMNREKAVRLFIAAANQGHTRAYN 494
Query: 269 EHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+ G G+ E + +KA A R G A + L+ +D + + +
Sbjct: 495 KLGYCYEEGIVLEKDPIKAFDLYNKACRKGYNRAYYNLGRCLENGIGCQKDVDISLCSFY 554
Query: 325 RA 326
+
Sbjct: 555 KG 556
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GV+KN + + + A + + A+ G Y E +++K+A Y+
Sbjct: 137 GGCYHDALGVKKNPKLCIYWYKRSAEQDNPCAIGILGYCYLEGFGVPLNEKKA-FECYKT 195
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA++ DP A Y L C G+G + NLQ A WY +A
Sbjct: 196 AALMHDPVAT-----------------------YNLGYCYEEGKGTEKNLQYAFEWYKKA 232
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFT 276
AE G + CY G G + A + +A+ G+ AQ + G+G T
Sbjct: 233 AEMGNAFGQNSLGFCYEEGIGTEKNQAIALQLYMMSAEQGYPWAQSNLAYCYQKGIG--T 290
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
+ + + ++ + A G + A H QQ +D+ V+
Sbjct: 291 AKDYVLSCLWYKKAAYQGLSRAQHNLGHCYQQGLGVKKDKKQAVL 335
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKK 153
EA+ +L + F G GV K++ +A ++ + LA+V + ++D++
Sbjct: 44 EALSILSFCYEF--GIGVNKDIKEAEKGYIIAGEKEVGLALVRLTFLRRFGRPGIKIDRR 101
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
EA ++ +G ++++ L +AS G+ AQY L C H GV N +
Sbjct: 102 EAQ-EMFNTLQKIG---------KKSISWLEKASNYGNSYAQYCLGGCYHDALGVKKNPK 151
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
WY R+AE A+ CY G G+PL+ ++A + K AA
Sbjct: 152 LCIYWYKRSAEQDNPCAIGILGYCYLEGFGVPLNEKKAFECYKTAA 197
>gi|349610785|ref|ZP_08890112.1| hypothetical protein HMPREF1028_02087 [Neisseria sp. GT4A_CT1]
gi|348615784|gb|EGY65294.1| hypothetical protein HMPREF1028_02087 [Neisseria sp. GT4A_CT1]
Length = 267
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GVR++ +A++ + K A +G A + G+MY +K + Y +A
Sbjct: 120 GAMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQNNLGVMY---EKGQGVRQDYARA---- 172
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
V+ +A+ G AQ+ L L GRGV + +AA W+ +AAE G
Sbjct: 173 ------------VEWFLKAAEQGTATAQFNLGLMYETGRGVRQDYAQAAGWFRKAAEQGD 220
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A +N +L Y+FG G+P ++ A++W+ +A C +G Q
Sbjct: 221 AYAQHNLALMYAFGRGVPQNYTIAKEWLGKA--CINGDQQ 258
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+V+AQ L + +G GV + +A +WY +AAE G A YN L Y+ +
Sbjct: 34 QAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLYANDSSI 93
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAAD 299
+ QA +W ++AA+ GH AQ G ++ G+ ++A+ + + + G A
Sbjct: 94 HQDYAQAAEWYRKAAEQGHPSAQNNLG-AMYANGQGVRQDYLQAMEWYHKSAKQGYAPAQ 152
Query: 300 HVKNVILQQLSATSRDRAMLV 320
+ V+ ++ +D A V
Sbjct: 153 NNLGVMYEKGQGVRQDYARAV 173
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL-YRQAAVL 166
G ++ G GV ++ +A+ + K A +G+ A + GL+Y +++I Y QAA
Sbjct: 48 GVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGLLY----ANDSSIHQDYAQAAEW 103
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
AA+ GH AQ L G+GV + +A WY ++A+ G
Sbjct: 104 YRKAAEQ----------------GHPSAQNNLGAMYANGQGVRQDYLQAMEWYHKSAKQG 147
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMM 281
Y A N + Y G+G+ + +A +W +AA+ G AQ GL ++ G +
Sbjct: 148 YAPAQNNLGVMYEKGQGVRQDYARAVEWFLKAAEQGTATAQFNLGL-MYETGRGVRQDYA 206
Query: 282 KAVVYLELATRAGETAADH 300
+A + A G+ A H
Sbjct: 207 QAAGWFRKAAEQGDAYAQH 225
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
L+AAE G V+A N + Y G G+ + QA KW ++AA+ G AQ GL
Sbjct: 33 LQAAERGNVKAQNNLGVMYEKGLGVHQDYTQAMKWYRKAAEQGAATAQYNLGL 85
>gi|270295371|ref|ZP_06201572.1| serine/threonine protein kinase [Bacteroides sp. D20]
gi|270274618|gb|EFA20479.1| serine/threonine protein kinase [Bacteroides sp. D20]
Length = 727
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + GR V KN +A + K A +G+ A + G +Y+ +++ R
Sbjct: 476 GRMYFLGRDVAKNATEAEKWYQKAANQGNAKAQNELGNLYY------TGLNVTR------ 523
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N EA+K +A+ G AQY+L G+G+ N EAA+WY +AAE
Sbjct: 524 -------NYSEAIKWYQKAAEQGIASAQYKLGYMYDYGQGISQNRVEAAKWYKKAAEQEN 576
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK---AV 284
V A Y + + G+P +A KW K+AA+ G KAQ + G +++ G K A+
Sbjct: 577 VDAQYRLGNMFFYKVGIPEDIDEAIKWYKKAAEQGDIKAQKKLG-EIYSNGARKKDPEAI 635
Query: 285 VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 327
+ ++A G+ A L+QL L W M
Sbjct: 636 KWYKMAAERGDAEA-------LKQLGDIYEKENALEAVKWYKM 671
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA 189
K A +G+T A + G MY+ LG A+ NA EA K +A+
Sbjct: 462 KAAEQGNTEAQYELGRMYF-----------------LGRDVAK--NATEAEKWYQKAANQ 502
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ +AQ +L + G V N EA +WY +AAE G A Y Y +G+G+ +
Sbjct: 503 GNAKAQNELGNLYYTGLNVTRNYSEAIKWYQKAAEQGIASAQYKLGYMYDYGQGISQNRV 562
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLF 275
+A KW K+AA+ + AQ G F
Sbjct: 563 EAAKWYKKAAEQENVDAQYRLGNMFF 588
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYR 161
+ G + +G+G+ +N +A + K A + + A G M++ + + AI Y+
Sbjct: 546 KLGYMYDYGQGISQNRVEAAKWYKKAAEQENVDAQYRLGNMFFYKVGIPEDIDEAIKWYK 605
Query: 162 QAAVLGDPAAQPANAE-----------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+AA GD AQ E EA+K A+ G A QL +
Sbjct: 606 KAAEQGDIKAQKKLGEIYSNGARKKDPEAIKWYKMAAERGDAEALKQLGDIYEKE----- 660
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKAQ 267
N EA +WY A E G A +N L Y +G+ G+P + +A KW ++AA+ G AQ
Sbjct: 661 NALEAVKWYKMAIEQGNASASFNLGLIYEYGKPGIPKNKAEAIKWYRKAAEQGSETAQ 718
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE--AAISLYRQA 163
R G F + G+ +++D+A+ + K A +G A G +Y +K+ AI Y+ A
Sbjct: 582 RLGNMFFYKVGIPEDIDEAIKWYKKAAEQGDIKAQKKLGEIYSNGARKKDPEAIKWYKMA 641
Query: 164 AVLGDPAA--------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQE 214
A GD A + NA EAVK A G+ A + L L G+ G+ N E
Sbjct: 642 AERGDAEALKQLGDIYEKENALEAVKWYKMAIEQGNASASFNLGLIYEYGKPGIPKNKAE 701
Query: 215 AARWYLRAAEGGYVRAMYN 233
A +WY +AAE G A N
Sbjct: 702 AIKWYRKAAEQGSETAQKN 720
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A P + K +A+ G+ AQY+L GR V N EA +WY +AA G +
Sbjct: 447 ANMPPKKKNGFKETAKAAEQGNTEAQYELGRMYFLGRDVAKNATEAEKWYQKAANQGNAK 506
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A Y G + ++ +A KW ++AA+ G AQ + G
Sbjct: 507 AQNELGNLYYTGLNVTRNYSEAIKWYQKAAEQGIASAQYKLG 548
>gi|46446347|ref|YP_007712.1| hypothetical protein pc0713 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399988|emb|CAF23437.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 447
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+ G +K G GV ++ +A+ F A +G A + MY + +
Sbjct: 258 KLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRV------------ 305
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
P + +EA+K + G AQ L +G+G+ + QEAA+++ AA+
Sbjct: 306 -------PQSHQEAIKYFELIADQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQ 358
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMM 281
G A Y+ G G+ S ++A K+ K AAD GH AQ E G GL E
Sbjct: 359 GEADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQYELGTMYKKGLGVEQSSQ 418
Query: 282 KAVVYLELATRAGET-AADHVKNVILQQ 308
+A+ Y +LA G T AA + ++I Q+
Sbjct: 419 EALRYYQLAAEQGNTQAAIKIDSIISQK 446
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+K GRGV ++ +A F A +G A ++ L+ D +
Sbjct: 189 GIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQ------------- 235
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+E K A+ G V AQ +L +G GV+ + QEA +++ AA+ G
Sbjct: 236 -------TNQETFKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGD 288
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 282
V A YN + Y+ G+ +P SH++A K+ + AD G AQ G ++ +G+ + +
Sbjct: 289 VNAQYNLAFMYAKGKRVPQSHQEAIKYFELIADQGEAIAQCALGF-MYFQGKGITQSHQE 347
Query: 283 AVVYLELATRAGETAA 298
A Y + A GE A
Sbjct: 348 AAKYFKFAADQGEADA 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA K A+ G V+AQY L GRGV + QEA +++ AA+ G+ A + +
Sbjct: 132 EAFKYFKLAADQGDVKAQYNLGCMYINGRGVVHSEQEAIKYFKFAADQGHADAQFIIGIR 191
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 292
Y G G+ S+++A K+ + AA GH +AQLE L L E + + Y +LA
Sbjct: 192 YKKGRGVSQSNQEATKYFQLAAKQGHAEAQLE--LKLIIESHDIAQTNQETFKYFKLAAD 249
Query: 293 AGETAA 298
G+ A
Sbjct: 250 QGDVNA 255
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 22/190 (11%)
Query: 132 AARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQPA------------- 174
A +G A + GLMY A ++ AA GD AQ
Sbjct: 105 ADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGRGVVH 164
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ +EA+K A+ GH AQ+ + + +GRGV + QEA +++ AA+ G+ A
Sbjct: 165 SEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLEL 224
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
L + ++++ K+ K AAD G AQ + G GL E +A+ Y +LA
Sbjct: 225 KLIIE-SHDIAQTNQETFKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLA 283
Query: 291 TRAGETAADH 300
G+ A +
Sbjct: 284 ADQGDVNAQY 293
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQ +L L G+ V + EA +++ AA+ G V+A YN Y G G+ S +
Sbjct: 108 GDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGRGVVHSEQ 167
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A K+ K AAD GH AQ G+ G +A Y +LA + G A +I
Sbjct: 168 EAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLI 227
Query: 306 LQ 307
++
Sbjct: 228 IE 229
>gi|428169149|gb|EKX38086.1| hypothetical protein GUITHDRAFT_77568, partial [Guillardia theta
CCMP2712]
Length = 288
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKKEAAISLYRQAAVLGDP 169
G+ N A+ +K A RGS AM GLMY E D ++A L R A +
Sbjct: 103 GLEPNASAAVPLLIKAADRGSKRAMTWVGLMYAEGRYGMLQDDEKAEWYLLRSAREYKE- 161
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
+Q I RA ++LA GRGV N ++A WY RA+ GY
Sbjct: 162 GSQVGK-----------EIRAGARALFKLAQRFAEGRGVKQNYEKAIDWYSRASIKGYSP 210
Query: 230 AMYNTSLCY--SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A Y +CY G GL S A +W RA++ GH KAQ + LGLF
Sbjct: 211 AFYELGMCYIKGLGHGLDQSDSAAVEWYARASEEGHAKAQFK--LGLF 256
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+ ++ G+ +AQY L +C G GV+ + + AA W+ ++A G+V+A Y +LCY +G+G+
Sbjct: 8 EGALKGNDKAQYHLGICYAEGLGVEKSYKRAAGWFSKSARQGHVKATYELALCYRYGDGV 67
Query: 245 PLSHRQARKWMKRAADCG 262
S+ + R+ ++ A+ G
Sbjct: 68 SKSYTKCRRLLQSASRKG 85
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
A L + +RF GRGV++N +KA+D + + + +G + A + G+ Y
Sbjct: 173 ARALFKLAQRFAEGRGVKQNYEKAIDWYSRASIKGYSPAFYELGMCY------------- 219
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
LG Q +A AV+ +AS GH +AQ++L L +GR + + A W++
Sbjct: 220 --IKGLGHGLDQSDSA--AVEWYARASEEGHAKAQFKLGLFYLKGRSMPKDEFMATEWFM 275
Query: 221 RAAEGG 226
AAE G
Sbjct: 276 EAAEQG 281
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A W+L A G +A Y+ +CY+ G G+ S+++A W ++A GH KA E L
Sbjct: 3 ASWFLEGALKGNDKAQYHLGICYAEGLGVEKSYKRAAGWFSKSARQGHVKATYELAL 59
>gi|408379852|ref|ZP_11177443.1| hemaglutinin protein [Agrobacterium albertimagni AOL15]
gi|407746229|gb|EKF57754.1| hemaglutinin protein [Agrobacterium albertimagni AOL15]
Length = 1261
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA K A+ G AQY+LA L +G GV N+ +A R+Y AA G AM+N ++
Sbjct: 1020 EAAKWYRLAADKGFAPAQYRLANFLEKGTGVAPNIGDAKRYYEMAANAGNASAMHNLAVI 1079
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y+ G+ + +A +W +AAD G +Q + G T +++ + + +A +
Sbjct: 1080 YASGKDGAQDYAKAVEWFGKAADYGISDSQFNLAILSARGNGTAPDLVTSYKWFAIAAKG 1139
Query: 294 GETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
G+T A ++ + L +RA VD W+A
Sbjct: 1140 GDTDAAQKRDEVANALKPGELERARAEVDLWKA 1172
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 72 IAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKG 131
+ A T P L S+ K+ + + L G R+ GRGV+ + +A +
Sbjct: 980 VPAEITPPSL---SIAAKNGD--------PVALFEIGARYTEGRGVKNDFAEAAKWYRLA 1028
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH 191
A +G A YR A L N +A + A+ AG+
Sbjct: 1029 ADKGFAPAQ-------------------YRLANFLEKGTGVAPNIGDAKRYYEMAANAGN 1069
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
A + LA+ G+ + +A W+ +AA+ G + +N ++ + G G +
Sbjct: 1070 ASAMHNLAVIYASGKDGAQDYAKAVEWFGKAADYGISDSQFNLAILSARGNGTAPDLVTS 1129
Query: 252 RKWMKRAADCGHGKA 266
KW AA G A
Sbjct: 1130 YKWFAIAAKGGDTDA 1144
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLF 275
AA+ G A++ Y+ G G+ +A KW + AAD G AQ LE G G+
Sbjct: 992 AAKNGDPVALFEIGARYTEGRGVKNDFAEAAKWYRLAADKGFAPAQYRLANFLEKGTGVA 1051
Query: 276 TEGEMMKAVVYLELATRAGETAADHVKNVI 305
+ A Y E+A AG +A H VI
Sbjct: 1052 P--NIGDAKRYYEMAANAGNASAMHNLAVI 1079
>gi|237748172|ref|ZP_04578652.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379534|gb|EEO29625.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 537
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ F+ G GV+++ KA + K A +G +A G++Y E D +AA +L
Sbjct: 162 GEMFEAGEGVKRDYKKAAFWYKKAADKGHLMAATKLGILYMEGRGVKQDDAKAA-ALLSH 220
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ ++ + A++ +A++ G+ +AQ+ L G GV+
Sbjct: 221 AAKRGIALAQSNLGVLYASGRGVESSPKRALEWYKKAAVQGNSQAQFSLGNMYEDGSGVE 280
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
NL AA WY ++AE G A N Y G +A W RAAD G+ +AQ
Sbjct: 281 KNLAVAAAWYQKSAEQGNAEAQNNLGRLYMEGGEFEGREDEAFMWFSRAADQGYAEAQTN 340
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAGE 295
G+ GL + ++ KA + + A G+
Sbjct: 341 LGVLYSYGLGVDKDLSKAFYWYQQAAEKGQ 370
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G + GRGV + +AL+ + K A +G++ A G MY + E +++ Y+++
Sbjct: 234 GVLYASGRGVESSPKRALEWYKKAAVQGNSQAQFSLGNMYEDGSGVEKNLAVAAAWYQKS 293
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ +EA +A+ G+ AQ L + G GVD
Sbjct: 294 AEQGNAEAQNNLGRLYMEGGEFEGREDEAFMWFSRAADQGYAEAQTNLGVLYSYGLGVDK 353
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+L +A WY +AAE G + + Y GEG+ +QA W ++AA G ++Q
Sbjct: 354 DLSKAFYWYQQAAEKGQAEGAFFLAEAYYKGEGVHRDDKQAVFWYQKAAKLGVPESQDRL 413
Query: 271 GLGLFTEGEMMK 282
GL + T G +K
Sbjct: 414 GL-MLTNGVGVK 424
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G GV K+L KA + + A +G Y++ + + A+ Y++A
Sbjct: 342 GVLYSYGLGVDKDLSKAFYWYQQAAEKGQAEGAFFLAEAYYKGEGVHRDDKQAVFWYQKA 401
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LG P +Q + ++A +A+ G+ +Q L + RG GV+
Sbjct: 402 AKLGVPESQDRLGLMLTNGVGVKQDYKQAYSWFRKAARQGYAESQNNLGVLYARGLGVEK 461
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ ++A WY +A +A +N Y G G+ +QAR W +AA G +AQ
Sbjct: 462 DYKQAVAWYRKAVMQNLPQAQFNLGTMYLQGHGVKQDVKQARHWFTKAAAQGLPEAQ 518
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 101 AMVLLRWGKRFKHGRGVRKNL----DKALDSFLKGAARGSTLAMVDAGLMY-----WEMD 151
+M L R G F GRG + N+ DK +D L G R TLA+V G ++ W D
Sbjct: 37 SMSLFRGG--FFSGRGAQGNVVMPRDK-MDWNL-GRVRQGTLAVV--GCLFLANAAWAND 90
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+ + Y Q + E+A +A+ G+ AQ LA + G GV+ +
Sbjct: 91 YSDG-MQFY-----------QDKDYEKAFSSFQKAADKGNAAAQSALAALYYNGEGVEED 138
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
AA WY RAAE G A + + GEG+ +++A W K+AAD GH A + G
Sbjct: 139 EAAAALWYSRAAEHGRTDAQFALGEMFEAGEGVKRDYKKAAFWYKKAADKGHLMAATKLG 198
Query: 272 LGLFTEGEMMK 282
+ L+ EG +K
Sbjct: 199 I-LYMEGRGVK 208
>gi|432861889|ref|ZP_20086649.1| hypothetical protein A311_02381 [Escherichia coli KTE146]
gi|431405636|gb|ELG88869.1| hypothetical protein A311_02381 [Escherichia coli KTE146]
Length = 655
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ GRG KN+ +A FL A G+T A + A IS +
Sbjct: 375 GIMYRDGRGTDKNISEARKWFLLAAQNGNTSAQYEI-----------ARISRF------- 416
Query: 168 DPAAQPA-NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
A +P N EEA++ A+ GH RAQY L G GV + +A RW L++AE G
Sbjct: 417 --AVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVARDKVQAHRWLLQSAEQG 474
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH---GKAQLEHGLGLFTEGE 279
Y+ A Y+T+ YS E + +A W + A G G+A E G T +
Sbjct: 475 YLYAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAMYELGKYYLTNND 530
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+G+ S L A +G +LA G MY+E D+ + L
Sbjct: 310 KGLYYYPSSVFQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL--------------- 354
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
A +A+ + AQY L + GRG D N+ EA +W+L AA+ G A Y
Sbjct: 355 ----AFNWFTRAAQHNDIDAQYALGIMYRDGRGTDKNISEARKWFLLAAQNGNTSAQYEI 410
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 274
+ F ++ +A +W AA GH +AQ + HG+G+
Sbjct: 411 ARISRFAVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGV 456
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR LRW G+ + HG GV ++ +A L+ A +G
Sbjct: 417 AVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVARDKVQAHRWLLQSAEQGYL 476
Query: 138 LAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y E + +E A+ + + A G A P N
Sbjct: 477 YAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAMYELGKYYLTNNDDPENNA 536
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA++ + A+ G + A + LA + L+ + + + A WY +AA G A + T++
Sbjct: 537 EAIQWITGAAQRGRIEAIFLLAEMYLYGTKDIAKDENHALHWYEKAARLGSTEAQHQTAV 596
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 597 MYAQGTGTKIDNKQAWMWLTIAGN 620
>gi|149908090|ref|ZP_01896758.1| hypothetical protein PE36_20520 [Moritella sp. PE36]
gi|149809096|gb|EDM69027.1| hypothetical protein PE36_20520 [Moritella sp. PE36]
Length = 291
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQPANA-- 176
K +++F+ A G++ A + G MY + A+S YR++A G AQ A
Sbjct: 28 KYIETFI-AAKHGNSQAQYNLGFMYANGSGFLKNNHKAVSWYRKSAEQGCAIAQSTLAYM 86
Query: 177 -----------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+EA ++A+ AQ L++ GRGV N EA W +AAE
Sbjct: 87 YGSGKGTYQSDQEAAIWCHKAAEQNIALAQLMLSVMYVNGRGVAQNDNEAVLWCRKAAEQ 146
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGE 279
Y RA YN Y+ G+G+ S++ A W K+A++ G+ KAQ G+G+ E
Sbjct: 147 NYARAQYNLGFMYTKGKGVTQSYKIAVSWFKKASEQGYAKAQSNLGYMYSKGIGILKNDE 206
Query: 280 MMKAVVYLELATRAGETAADHVKNVI 305
+ A + A G A + +V+
Sbjct: 207 L--AAYWFRKAGEQGNAKAQYCLSVM 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +GRGV +N ++A+ K A + A + G MY K + Y+
Sbjct: 123 YVNGRGVAQNDNEAVLWCRKAAEQNYARAQYNLGFMY---TKGKGVTQSYK--------- 170
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
AV +AS G+ +AQ L +G G+ N + AA W+ +A E G +A
Sbjct: 171 -------IAVSWFKKASEQGYAKAQSNLGYMYSKGIGILKNDELAAYWFRKAGEQGNAKA 223
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y S+ Y G G+P + A W+ A G+ A
Sbjct: 224 QYCLSVMYYKGHGVPRCDKHAYAWVSLALINGYENAH 260
>gi|153869990|ref|ZP_01999482.1| Sel1-like repeat [Beggiatoa sp. PS]
gi|152073542|gb|EDN70516.1| Sel1-like repeat [Beggiatoa sp. PS]
Length = 174
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A +L +A+ G+ AQ+QL L +G+GV + +AA+W+ AAE G++ A Y L Y
Sbjct: 39 AAQLYLKAAEKGYTEAQFQLGLMYLQGKGVPQSFIQAAQWFYTAAEFGHIDAQYQLGLRY 98
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKA 266
GEG+P + +A KW K+AA+ G +A
Sbjct: 99 EKGEGVPQNRLKAFKWYKKAAEQGQYQA 126
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 20/139 (14%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
+L+P EA GK F G ++L A +LK A +G T A GLMY +
Sbjct: 8 QQSLKP-EEAGFSFEIGKLFYQGEETTQDLTLAAQLYLKAAEKGYTEAQFQLGLMYLQ-- 64
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
P + +A + Y A+ GH+ AQYQL L +G GV N
Sbjct: 65 -----------------GKGVPQSFIQAAQWFYTAAEFGHIDAQYQLGLRYEKGEGVPQN 107
Query: 212 LQEAARWYLRAAEGGYVRA 230
+A +WY +AAE G +A
Sbjct: 108 RLKAFKWYKKAAEQGQYQA 126
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+++ ++G +L AA+ YL+AAE GY A + L Y G+G+P S QA +W
Sbjct: 20 FEIGKLFYQGEETTQDLTLAAQLYLKAAEKGYTEAQFQLGLMYLQGKGVPQSFIQAAQWF 79
Query: 256 KRAADCGHGKAQLEHGL 272
AA+ GH AQ + GL
Sbjct: 80 YTAAEFGHIDAQYQLGL 96
>gi|193213277|ref|YP_001999230.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193086754|gb|ACF12030.1| Sel1 domain protein repeat-containing protein [Chlorobaculum parvum
NCIB 8327]
Length = 524
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GVR++ +AL + AA+G + A + GLMY + D EA + Y +
Sbjct: 229 GLMYANGEGVRQDYVEALKWYRLSAAKGDSDAQFNLGLMYAKGYGVRQDYAEA-LKWYHK 287
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ + EA+K ++ G+ AQ+ + + +G GV
Sbjct: 288 AAAQGDAKAQYNIGWFYKNGYSVRQDYIEALKWYRLSAAQGNTEAQFNIGVMYEKGYGVR 347
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WYL +A G A YNT + Y G G+ + +A KW + +A G+ AQ
Sbjct: 348 QDYVEALKWYLLSATQGNALAQYNTGVMYHKGMGVRQDYTEALKWYRLSAAQGNAGAQSN 407
Query: 270 HGL 272
G+
Sbjct: 408 LGV 410
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+++G GVR++ ++AL + AA+G++ A G+ Y++ D EA + R +A
Sbjct: 124 YENGHGVRQDYEEALKWYHLSAAQGNSEAQRRIGVFYYKGYGVKQDYVEA-LKWLRLSAA 182
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ AQ + EA+K ++ G+ AQY + L G GV +
Sbjct: 183 QGNAGAQRDIGLSYVKGEGVSQDYAEALKWFRLSAAQGNAGAQYDIGLMYANGEGVRQDY 242
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EA +WY +A G A +N L Y+ G G+ + +A KW +AA G KAQ G
Sbjct: 243 VEALKWYRLSAAKGDSDAQFNLGLMYAKGYGVRQDYAEALKWYHKAAAQGDAKAQYNIGW 302
Query: 273 ----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G + ++A+ + L+ G T A V+ ++ +D
Sbjct: 303 FYKNGYSVRQDYIEALKWYRLSAAQGNTEAQFNIGVMYEKGYGVRQD 349
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GVR++ +AL +L A +G+ LA + G+MY + D EA + YR
Sbjct: 337 GVMYEKGYGVRQDYVEALKWYLLSATQGNALAQYNTGVMYHKGMGVRQDYTEA-LKWYRL 395
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G+ AQ + EA++LL ++ G+ AQ L RG GV
Sbjct: 396 SAAQGNAGAQSNLGVMYVMGVGVRQDYAEALRLLRLSAEKGYDFAQCNLGTMYARGEGVK 455
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ EA +WY +A G A +N Y G+G+ A++W ++A D
Sbjct: 456 QDYGEALKWYRLSAAQGNAEAQFNIGETYEKGQGVIQDESTAKEWYRKACD 506
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGVR++ +AL F AA+G + G +Y E A+ Y +
Sbjct: 85 GVMYANGRGVRQDYAEALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYEEALKWYHLS 144
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + EA+K L ++ G+ AQ + L +G GV
Sbjct: 145 AAQGNSEAQRRIGVFYYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLSYVKGEGVSQ 204
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA +W+ +A G A Y+ L Y+ GEG+ + +A KW + +A G AQ
Sbjct: 205 DYAEALKWFRLSAAQGNAGAQYDIGLMYANGEGVRQDYVEALKWYRLSAAKGDSDAQFNL 264
Query: 271 GL 272
GL
Sbjct: 265 GL 266
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV ++ +AL F AA+G+ A D GLMY D E A+ YR
Sbjct: 193 GLSYVKGEGVSQDYAEALKWFRLSAAQGNAGAQYDIGLMYANGEGVRQDYVE-ALKWYRL 251
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A GD AQ + EA+K ++A+ G +AQY + G V
Sbjct: 252 SAAKGDSDAQFNLGLMYAKGYGVRQDYAEALKWYHKAAAQGDAKAQYNIGWFYKNGYSVR 311
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +A G A +N + Y G G+ + +A KW +A G+ AQ
Sbjct: 312 QDYIEALKWYRLSAAQGNTEAQFNIGVMYEKGYGVRQDYVEALKWYLLSATQGNALAQYN 371
Query: 270 HGL----GLFTEGEMMKAVVYLELATRAGETAA 298
G+ G+ + +A+ + L+ G A
Sbjct: 372 TGVMYHKGMGVRQDYTEALKWYRLSAAQGNAGA 404
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GVR++ +AL + K AA+G A + G Y D EA + YR
Sbjct: 265 GLMYAKGYGVRQDYAEALKWYHKAAAQGDAKAQYNIGWFYKNGYSVRQDYIEA-LKWYRL 323
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G+ AQ + EA+K ++ G+ AQY + H+G GV
Sbjct: 324 SAAQGNTEAQFNIGVMYEKGYGVRQDYVEALKWYLLSATQGNALAQYNTGVMYHKGMGVR 383
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EA +WY +A G A N + Y G G+ + +A + ++ +A+ G+ AQ
Sbjct: 384 QDYTEALKWYRLSAAQGNAGAQSNLGVMYVMGVGVRQDYAEALRLLRLSAEKGYDFAQCN 443
Query: 270 HGLGLFTEGEMMK 282
G ++ GE +K
Sbjct: 444 LGT-MYARGEGVK 455
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
+A + G + G+ VR++ +AL F AA+G+ A + G+MY D E
Sbjct: 41 DAEAQFKIGLMYALGKEVRQDYVEALKWFRLSAAQGNAGAQGNLGVMYANGRGVRQDYAE 100
Query: 155 AAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALC 201
A+ +R +A G Q + + EEA+K + ++ G+ AQ ++ +
Sbjct: 101 -ALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYEEALKWYHLSAAQGNSEAQRRIGVF 159
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
++G GV + EA +W +A G A + L Y GEG+ + +A KW + +A
Sbjct: 160 YYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLSYVKGEGVSQDYAEALKWFRLSAAQ 219
Query: 262 GHGKAQLEHGLGLFTEGEMMK 282
G+ AQ + GL ++ GE ++
Sbjct: 220 GNAGAQYDIGL-MYANGEGVR 239
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA 189
KGA +G A GLMY LG Q + EA+K ++
Sbjct: 35 KGAEQGDAEAQFKIGLMY-----------------ALGKEVRQ--DYVEALKWFRLSAAQ 75
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ L + GRGV + EA +W+ +A GY Y+ Y G G+ +
Sbjct: 76 GNAGAQGNLGVMYANGRGVRQDYAEALKWFRLSAAQGYDVPQYSIGFIYENGHGVRQDYE 135
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A KW +A G+ +AQ G+ G + + ++A+ +L L+ G A +
Sbjct: 136 EALKWYHLSAAQGNSEAQRRIGVFYYKGYGVKQDYVEALKWLRLSAAQGNAGAQRDIGLS 195
Query: 306 LQQLSATSRDRA 317
+ S+D A
Sbjct: 196 YVKGEGVSQDYA 207
>gi|329123580|ref|ZP_08252142.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
gi|327470322|gb|EGF15782.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
Length = 219
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + ++ + A KL + G +AQY L + GRGV + EA +WY +AAE G
Sbjct: 36 GLTAYEQSDYQTAFKLWLPLAEQGDAKAQYNLGVMYGNGRGVKQDDFEAVKWYRKAAEQG 95
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK---- 282
Y A + + Y G G+ +A KW ++AA+ GH KAQ + G+ ++ G+ +K
Sbjct: 96 YASAQFYLGMKYENGSGVKQDVFEAVKWYRKAAEQGHAKAQFDLGV-MYDNGQSVKQDDV 154
Query: 283 -AVVYLELATRAGETAADHV 301
AV + A G A +
Sbjct: 155 EAVKWFRKAAEQGNANAQAI 174
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAG 190
GL +E + A L+ A GD AQ + EAVK +A+ G
Sbjct: 36 GLTAYEQSDYQTAFKLWLPLAEQGDAKAQYNLGVMYGNGRGVKQDDFEAVKWYRKAAEQG 95
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ AQ+ L + G GV ++ EA +WY +AAE G+ +A ++ + Y G+ + +
Sbjct: 96 YASAQFYLGMKYENGSGVKQDVFEAVKWYRKAAEQGHAKAQFDLGVMYDNGQSVKQDDVE 155
Query: 251 ARKWMKRAADCGHGKAQ 267
A KW ++AA+ G+ AQ
Sbjct: 156 AVKWFRKAAEQGNANAQ 172
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 132 AARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQ-------------P 173
A +G A + G+MY + D EA + YR+AA G +AQ
Sbjct: 56 AEQGDAKAQYNLGVMYGNGRGVKQDDFEA-VKWYRKAAEQGYASAQFYLGMKYENGSGVK 114
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ EAVK +A+ GH +AQ+ L + G+ V + EA +W+ +AAE G A
Sbjct: 115 QDVFEAVKWYRKAAEQGHAKAQFDLGVMYDNGQSVKQDDVEAVKWFRKAAEQGNANAQAI 174
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
Y G+G+ ++ A++W +A D G+
Sbjct: 175 LGFSYLLGKGVQVNKSLAKEWFGKACDNGN 204
>gi|282858109|ref|ZP_06267304.1| Sel1 repeat protein [Pyramidobacter piscolens W5455]
gi|282584031|gb|EFB89404.1| Sel1 repeat protein [Pyramidobacter piscolens W5455]
Length = 452
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 29/172 (16%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
EAM +L W R+++G GV K+ +AL + A RG A+ G++Y+ A
Sbjct: 269 EAMNILAW--RYENGEGVTKSPTQALQWYKAAAERGEHNALFRLGVLYYTGKHVAADHAL 326
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A +++AA LGD V A Y +A G G N +EA
Sbjct: 327 AFEYFKKAAELGD-----------------------VAAWYNVAWLNKTGDGTAQNFREA 363
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
W+ RAA G RA N + Y+ GEG P+ +A W + + CG+ AQ
Sbjct: 364 KTWFERAALTGNSRAQVNLGVMYANGEGFPVDLEEACFWFELSKLCGNEDAQ 415
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L EA +LL + ++ G V+K+ +A+ + K A GS+ AM ++ W + E
Sbjct: 231 LPEAQLLL--AQLYQKGIFVKKDAKQAVRWYEKAARNGSSEAM---NILAWRYENGEG-- 283
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
V P +A++ A+ G A ++L + + G+ V + A
Sbjct: 284 -------VTKSPT-------QALQWYKAAAERGEHNALFRLGVLYYTGKHVAADHALAFE 329
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
++ +AAE G V A YN + G+G + R+A+ W +RAA G+ +AQ+ G+ ++
Sbjct: 330 YFKKAAELGDVAAWYNVAWLNKTGDGTAQNFREAKTWFERAALTGNSRAQVNLGV-MYAN 388
Query: 278 GE-----MMKAVVYLELATRAGETAADHVKNVILQQLS 310
GE + +A + EL+ G A + + QL
Sbjct: 389 GEGFPVDLEEACFWFELSKLCGNEDAQQGLDFVAPQLD 426
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 135 GSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAA------------QPANAEE 178
G A + GL+Y ++ E A++LY +AA D A PA
Sbjct: 159 GYAQAQRELGLLYETGERLEKDTARAVALYSEAAAQNDAFAMKFLAVLYLNGNNPAYRRT 218
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A +LL +A A AQ LA +G V + ++A RWY +AA G AM + Y
Sbjct: 219 AFELLKRADRANLPEAQLLLAQLYQKGIFVKKDAKQAVRWYEKAARNGSSEAMNILAWRY 278
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAG 294
GEG+ S QA +W K AA+ G A G+ +T + A Y + A G
Sbjct: 279 ENGEGVTKSPTQALQWYKAAAERGEHNALFRLGVLYYTGKHVAADHALAFEYFKKAAELG 338
Query: 295 ETAA 298
+ AA
Sbjct: 339 DVAA 342
>gi|158522728|ref|YP_001530598.1| Sel1 domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511554|gb|ABW68521.1| Sel1 domain protein repeat-containing protein [Desulfococcus
oleovorans Hxd3]
Length = 254
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 81 LRAASLVCKSWNDALRPLREAMVLLRW-----GKRFKHGRGVRKNLDKALDSFLKGAARG 135
L AAS+ +S +D L++A W G + G GV ++ +KAL K A +G
Sbjct: 14 LFAASVNAES-DDFTETLKKAEQGKCWAQTLIGYMYYLGDGVEQDFEKALFWTKKAAEQG 72
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQ 195
A + GL Y+ K + N EE+++ +A+ GH AQ
Sbjct: 73 GKDAQENLGLFYYVEGLKGMEV-----------------NKEESLQWFEKAAEQGHSGAQ 115
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
L + G GV N Q+A W+ +AAE G A Y Y +G G+P +++A +W
Sbjct: 116 LDLGRMYYLGHGVPQNYQKAFEWFTKAAEQGESDAEYLLGGMYFYGTGVPQDYKKAFEWY 175
Query: 256 KRAADCGHGKAQLEHGLGLF 275
+AA+ G +AQ G F
Sbjct: 176 SKAAEQGQPEAQASLGAMYF 195
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG--EGLPLS 247
G AQ + + G GV+ + ++A W +AAE G A N L Y +G+ ++
Sbjct: 36 GKCWAQTLIGYMYYLGDGVEQDFEKALFWTKKAAEQGGKDAQENLGLFYYVEGLKGMEVN 95
Query: 248 HRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHV 301
++ +W ++AA+ GH AQL+ G LG KA + A GE+ A+++
Sbjct: 96 KEESLQWFEKAAEQGHSGAQLDLGRMYYLGHGVPQNYQKAFEWFTKAAEQGESDAEYL 153
>gi|397676942|ref|YP_006518480.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397631|gb|AFN56958.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 373
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV K+ +KA+ + K A +G A + GL Y + ++ + +
Sbjct: 179 GNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAY-----RNLGLAYRKGEGISQ 233
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A +A +A+ GHV+AQ + ++ RGV + Y +AAE G
Sbjct: 234 DDA-------KAAFWYKKAADQGHVKAQLNMGFAYYQARGVAQDYARGIFLYRKAAEQGD 286
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EGEMM----- 281
+A YN ++ Y EG P Q+ W +RAA HG+ ++ LG+F +GE +
Sbjct: 287 SKAEYNLAIAYYNAEGEPRDLAQSIDWFQRAAS--HGEVSAQYNLGIFYLKGEGVPKDRN 344
Query: 282 KAVVYLELATRAGETAA 298
+A+ +LE A G A
Sbjct: 345 QAIFWLEKAAARGNVEA 361
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++AA WY +AAE G A YN +L Y G+G+ S+ +A W+K+AAD KA+ GL
Sbjct: 12 KQAAFWYEKAAEQGIDEAEYNLALAYEQGKGVEQSYERAFFWLKKAADQNFFKAETHLGL 71
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAM-------VDAGLMYWEMDKKEAAI------ 157
++ G+GV ++ ++A +LK AA + AG+M DKK A+
Sbjct: 37 YEQGKGVEQSYERAF-FWLKKAADQNFFKAETHLGLAYQAGIMLPRDDKKAVALFMKADR 95
Query: 158 -SLYRQAAV-LGDP----AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+ Y +A + LG+ A + ++AV +A+ G A L + GRGV N
Sbjct: 96 QAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFYMTGRGVPQN 155
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ + +AA+ A N Y G G+P +A W ++AAD G A+ E+
Sbjct: 156 YERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAAD--KGDAEAEYN 213
Query: 272 LGLFTEGEMMKAVVYLELATRAGE 295
LGL A L LA R GE
Sbjct: 214 LGL--------AYRNLGLAYRKGE 229
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G A+Y LAL +G+GV+ + + A W +AA+ + +A + L Y G L
Sbjct: 20 KAAEQGIDEAEYNLALAYEQGKGVEQSYERAFFWLKKAADQNFFKAETHLGLAYQAGIML 79
Query: 245 PLSHRQARK-WMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 298
P ++A +MK + +AQ+ G G + + KAV Y + A G+ A
Sbjct: 80 PRDDKKAVALFMKADRQAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGEA 138
>gi|349610784|ref|ZP_08890111.1| hypothetical protein HMPREF1028_02086 [Neisseria sp. GT4A_CT1]
gi|348615783|gb|EGY65293.1| hypothetical protein HMPREF1028_02086 [Neisseria sp. GT4A_CT1]
Length = 305
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GV ++ KA F K AA+G A D GL+Y LG
Sbjct: 82 GGLYYQGKGVVQDYKKAKYWFQKAAAQGFAKAQYDLGLIY-----------------FLG 124
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q +A + +A+ G++ AQY LA+ G GV ++A +WY +AAE G
Sbjct: 125 KGIEQDYG--QAAQWYEKAAKQGYLDAQYDLAIMYDNGLGVGKAPEKAFQWYRKAAEQGD 182
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMM 281
+A Y + Y G G+ +QA W+ RAAD + KAQL+ HG G+ + +
Sbjct: 183 NQAQYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK-- 240
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+A+ + A G A + ++ ++ S++R
Sbjct: 241 QALYWYRKAAEQGIGEAQYNLGLMYEEGQGVSKNR 275
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
L +A + +P L K N A + G + G+G K+ +A F
Sbjct: 15 LGHMANASNIPNFAETELEAKQGNAASQ--------FNLGLMYYSGKGAPKDYKQAEHWF 66
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ-AS 187
+ A +G A + G +Y++ + + Y++A K +Q A+
Sbjct: 67 RRAAEQGDVDAQTNLGGLYYQ---GKGVVQDYKKA-----------------KYWFQKAA 106
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G +AQY L L G+G++ + +AA+WY +AA+ GY+ A Y+ ++ Y G G+ +
Sbjct: 107 AQGFAKAQYDLGLIYFLGKGIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMYDNGLGVGKA 166
Query: 248 HRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLELAT 291
+A +W ++AA+ G +AQ HGLG+ + + +AV++L A
Sbjct: 167 PEKAFQWYRKAAEQGDNQAQYTVATRYMHGLGV--QKDFKQAVLWLHRAA 214
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-------EAAISLYRQAAVL 166
G+G+ ++ +A + K A +G A D +MY D E A YR+AA
Sbjct: 124 GKGIEQDYGQAAQWYEKAAKQGYLDAQYDLAIMY---DNGLGVGKAPEKAFQWYRKAAEQ 180
Query: 167 GDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ A ++AV L++A+ +++AQ L + G GV + +
Sbjct: 181 GDNQAQYTVATRYMHGLGVQKDFKQAVLWLHRAADQENIKAQLDLGVAYSHGFGVRQDDK 240
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+A WY +AAE G A YN L Y G+G+ + + A++W K+A D G
Sbjct: 241 QALYWYRKAAEQGIGEAQYNLGLMYEEGQGVSKNRKVAKEWYKKACDNG 289
>gi|432713475|ref|ZP_19948516.1| hypothetical protein WCI_01840 [Escherichia coli KTE8]
gi|431257278|gb|ELF50202.1| hypothetical protein WCI_01840 [Escherichia coli KTE8]
Length = 649
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G + G ++K+ +A F K A +G+ A+++ LMY + ++K + AISLY A
Sbjct: 331 GAMYYIGEIIKKDFVQAKYWFEKSAGQGNNDALLNLALMYRDGKGVNKNPQKAISLYLNA 390
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A P AQ + +A K +++ G+ AQY LA GRGVD
Sbjct: 391 ANKNHPLAQHSLACMYRDGEGVEVDDGQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDV 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ Q+ W +A+ Y +A Y G +P A +K AAD G A L
Sbjct: 451 DYQQVVYWLNLSADQKYSKAECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVL 510
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
HG + ++ +A+ YL A GE + + +I Q
Sbjct: 511 GQLYVHGREGYLPKDIHQAIAYLNQAQEGGEEQSAEILGMIYYQ 554
>gi|307610058|emb|CBW99593.1| hypothetical protein LPW_13631 [Legionella pneumophila 130b]
Length = 376
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EAM LL G+ +++G GV N ++A + + K A + + LA + G MY
Sbjct: 48 EEAMYLL--GRMYQYGYGVTTNYEEARNWYQKAADKNNALAQLSLGFMY----------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G +Q + EA K +A+ G+ AQ + L G GV + +A W
Sbjct: 95 ------DTGKGVSQ--DFAEAFKWYMKAAEQGNPIAQRNIGLMYATGDGVAASDDKAFIW 146
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ +AAE GY +A N Y G+G P ++A +W ++AA+ G K E+ LGL G
Sbjct: 147 FKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKAAEQGDEKG--EYSLGLLYTG 204
Query: 279 E 279
+
Sbjct: 205 Q 205
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA +A+ + AQ L G+GV + EA +WY++AAE G A N
Sbjct: 67 NYEEARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNI 126
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
L Y+ G+G+ S +A W K+AA+ G+ KAQ+ G +G T ++ KA + + A
Sbjct: 127 GLMYATGDGVAASDDKAFIWFKKAAEQGYSKAQVNLGYQYMMGKGTPKDVKKAFEWYQKA 186
Query: 291 TRAGETAADHVKNVIL--QQLSATSRDRA 317
G+ ++ ++ Q+ ++ D+A
Sbjct: 187 AEQGDEKGEYSLGLLYTGQEGGVSADDKA 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQ 162
G + G GV + DKA F K A +G + A V+ G Y M K + A Y++
Sbjct: 127 GLMYATGDGVAASDDKAFIWFKKAAEQGYSKAQVNLGYQY-MMGKGTPKDVKKAFEWYQK 185
Query: 163 AAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA GD + A+ + A QA+ GHV AQ LA +G GV
Sbjct: 186 AAEQGDEKGEYSLGLLYTGQEGGVSADDKAAFYWFSQAANHGHVNAQTYLAYYYLKGYGV 245
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH--GKA 266
D + +AA WY AAE G A G G+ ++QA W ++A G+ G+A
Sbjct: 246 DADPVKAAYWYQSAAEKGQPEAQAQLGQLLLTGTGVDKDYQQAAYWFGKSAHQGNPVGQA 305
Query: 267 QLEHGL--GLFTEGEMMKAVVYLELATR-AGETAADHVKNV 304
+L + GL ++KA +L++A E AA +K++
Sbjct: 306 KLGYMYLAGLGVNKSLVKAYAWLKIAAENKNEEAAKQLKSL 346
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W A+ L G + G+GV ++ +A ++K A +G+ +A + GLMY
Sbjct: 71 ARNWYQKAADKNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGLMY 130
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
GD A A+ ++A +A+ G+ +AQ L G+G
Sbjct: 131 -----------------ATGDGVA--ASDDKAFIWFKKAAEQGYSKAQVNLGYQYMMGKG 171
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA 266
++++A WY +AAE G + Y+ L Y+ E G+ + A W +AA+ GH A
Sbjct: 172 TPKDVKKAFEWYQKAAEQGDEKGEYSLGLLYTGQEGGVSADDKAAFYWFSQAANHGHVNA 231
Query: 267 Q 267
Q
Sbjct: 232 Q 232
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
++G A + + A L QA+ G+ A Y L G GV N +EA WY +AA+
Sbjct: 21 LVGFAAFENGDYTTAYPHLMQAAKEGNEEAMYLLGRMYQYGYGVTTNYEEARNWYQKAAD 80
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM--- 281
A + Y G+G+ +A KW +AA+ G+ AQ GL ++ G+ +
Sbjct: 81 KNNALAQLSLGFMYDTGKGVSQDFAEAFKWYMKAAEQGNPIAQRNIGL-MYATGDGVAAS 139
Query: 282 --KAVVYLELATRAGETAA 298
KA ++ + A G + A
Sbjct: 140 DDKAFIWFKKAAEQGYSKA 158
>gi|291562354|emb|CBL41170.1| FOG: TPR repeat, SEL1 subfamily [butyrate-producing bacterium
SS3/4]
Length = 291
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G + G GV + +A + + GS A+ G+ Y E A LY +A
Sbjct: 81 GICMEQGNGVEADPVQAFWLYQQAVEMGSLNAVCCLGVCYQYGIGTAPDAEKAAELYCKA 140
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P Q A+A EAV + A+ + Y+L +C G GV+
Sbjct: 141 AEYGSPRGQMLLARAFHDGIGVEADAAEAVHWVRAAAYQRYGEGMYRLGVCYEYGDGVEQ 200
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N + A W+ AAE G AM + CY G G+ S QA W +R A+CG ++ H
Sbjct: 201 NWEHAVHWFREAAESGVSVAMTDLGYCYEKGCGVEQSWEQAFSWYRRGAECGDLRSM--H 258
Query: 271 GLGLFTE 277
LG E
Sbjct: 259 NLGYCYE 265
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 99/261 (37%), Gaps = 42/261 (16%)
Query: 11 TGSRFTALQFPITEKD-NRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVL 69
TG +TAL + + + + + + RKA + C+ I +G+ + P
Sbjct: 39 TGDDWTALGNTLWDAEASDKKRMVDCFRKAAYLGSAWGVCNLGICMEQGNGVEADPVQAF 98
Query: 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
+ + L A + G +++G G + +KA + +
Sbjct: 99 WLYQQAVEMGSLNAVCCL--------------------GVCYQYGIGTAPDAEKAAELYC 138
Query: 130 KGAARGST-----LAMVDAGLMYWEMDKKEA------------AISLYRQAAVL--GDPA 170
K A GS LA + E D EA +YR GD
Sbjct: 139 KAAEYGSPRGQMLLARAFHDGIGVEADAAEAVHWVRAAAYQRYGEGMYRLGVCYEYGDGV 198
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q N E AV +A+ +G A L C +G GV+ + ++A WY R AE G +R+
Sbjct: 199 EQ--NWEHAVHWFREAAESGVSVAMTDLGYCYEKGCGVEQSWEQAFSWYRRGAECGDLRS 256
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
M+N CY G G+ S QA
Sbjct: 257 MHNLGYCYEKGRGVEQSWEQA 277
>gi|395009218|ref|ZP_10392781.1| TPR repeat-containing protein [Acidovorax sp. CF316]
gi|394312755|gb|EJE49867.1| TPR repeat-containing protein [Acidovorax sp. CF316]
Length = 236
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ ++A L +A+ AG+ + L L +G GV ++Q A + AAE G V+A ++
Sbjct: 75 DVKKAAALFTEAADAGYTPSMANLGLMYSKGDGVPQDMQRAQHYATLAAEKGDVQAQFDL 134
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLEL 289
Y G G+P SH +A W ++AA+ G AQ E+GL LF +G + ++A ++++
Sbjct: 135 GQSYRMGVGVPQSHEKAAHWYRKAAEAGSLAAQNEYGL-LFAQGHGVPQDYVQAFAWIDM 193
Query: 290 ATRAGETAADHVKN 303
AGE A +KN
Sbjct: 194 PASAGEPQA--IKN 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV K++ KA F + A G T +M + GLMY + D
Sbjct: 66 YYTGQGVGKDVKKAAALFTEAADAGYTPSMANLGLMYSKGD------------------- 106
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + + A A+ G V+AQ+ L G GV + ++AA WY +AAE G + A
Sbjct: 107 GVPQDMQRAQHYATLAAEKGDVQAQFDLGQSYRMGVGVPQSHEKAAHWYRKAAEAGSLAA 166
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
L ++ G G+P + QA W+ A G +A
Sbjct: 167 QNEYGLLFAQGHGVPQDYVQAFAWIDMPASAGEPQA 202
>gi|237746450|ref|ZP_04576930.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377801|gb|EEO27892.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 1527
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 117/280 (41%), Gaps = 63/280 (22%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA---- 155
EA LL G+ ++ GRGV ++ KA K AA+ A LM + A
Sbjct: 471 EAQYLL--GQAYRDGRGVPEDKQKARQWLEKAAAQNHAAAKSAYALMLGNGEGGPADPKT 528
Query: 156 AISLYRQAAVLGDPA-------------AQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
L +AA GDP + P +A+ A++ + +A+ G+ AQY +
Sbjct: 529 GARLLLEAAQQGDPQGMYFRGQAILAHDSSPESAKTALRWISEAAQKGYANAQYWMGTEN 588
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC------------------------- 237
H G+ + NL+ A WY RAAE GY A Y + C
Sbjct: 589 HTGKRIPKNLKAACEWYRRAAEQGYATAQYWYAHCLQEGTSDAQDVSKALVWFEKAAKNG 648
Query: 238 -----YSF------GEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEM 280
Y+ GEG+P + AR+W ++AA+ GH KAQ L GLG E
Sbjct: 649 NADAQYTLGILNHNGEGIPKNLEAARRWYRQAAEQGHVKAQYWLATCLLEGLGGPENPE- 707
Query: 281 MKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
+A E A R G+T A + ++ S T+++ AM +
Sbjct: 708 -EAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDAMAL 746
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ G +++ KAL F K A G+ A G++ + EAA YRQAA
Sbjct: 624 LQEGTSDAQDVSKALVWFEKAAKNGNADAQYTLGILNHNGEGIPKNLEAARRWYRQAAEQ 683
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ P N EEA L +A+ G +AQY+LAL G N
Sbjct: 684 GHVKAQYWLATCLLEGLGGPENPEEAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDA 743
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
A +W +AAE G A Y + G+ LP + AR+W ++AAD H +AQ + LG
Sbjct: 744 MALQWLEKAAENGDPAAQYRLGVENHIGKRLPENPEAARQWYRKAADQSHAEAQ--YWLG 801
Query: 274 LFT------EGEMMKAVVYLELATRAGETAADH 300
+ T E +A ++E + + G A +
Sbjct: 802 VLTLNGEGGEKNPAEAFRWMEKSAKNGHAEAQY 834
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---KKEA-AISLYRQAAVLGD 168
G G +N ++A + K A +G T A L+Y K +A A+ +AA GD
Sbjct: 698 EGLGGPENPEEAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDAMALQWLEKAAENGD 757
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
PAAQ P N E A + +A+ H AQY L + G G + N EA
Sbjct: 758 PAAQYRLGVENHIGKRLPENPEAARQWYRKAADQSHAEAQYWLGVLTLNGEGGEKNPAEA 817
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
RW ++A+ G+ A Y L + G+ +P + +AR+W+++AA H AQ +GL L
Sbjct: 818 FRWMEKSAKNGHAEAQYQLGLAFRDGDIIPENKPKARQWLEKAAAQNHANAQHAYGLMLL 877
Query: 276 T 276
Sbjct: 878 N 878
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ--------- 172
D L L GA R S LA G W AA + +AA G+P AQ
Sbjct: 68 DDPLMKTLTGAIRASGLA----GKPDWH-----AARLRFEEAAKAGEPYAQYFLGLMYLS 118
Query: 173 ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
N ++A Q++ AQY LA C +GRG + +EA WY AAE G+V
Sbjct: 119 GKGTTVNPQKAFDWFLQSARQNLPDAQYWLAGCYAKGRGTAKSEREAMYWYRIAAENGHV 178
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A L +G GLP + ++A W+++AA G+ +AQ
Sbjct: 179 GAQTGMGLALLYGVGLPQNEKEAAGWLEKAAHAGNAQAQ 217
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G GV K+ KALD + A +G A G++Y K + P
Sbjct: 1133 GNGVPKDTGKALDILVPVAEKGQPEAQNLLGVLY----SKGMGV---------------P 1173
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
NA+ A +A+ Q+ LA C G G + + +AA WY R+AE G+ +A Y
Sbjct: 1174 QNAKMACLWFEKAARQDEPGGQFGLARCYDTGDGGEQDFAKAAHWYTRSAEAGFPKAQYA 1233
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVYLEL 289
+ Y G GL QA W ++A G+ +A E GL L T + + L
Sbjct: 1234 LGILYREGLGLARDDAQAFYWYSQSAASGNVEAMREAGLALIDGRGTAKDESRGATLLHA 1293
Query: 290 ATRAGETAADH 300
A R + AA +
Sbjct: 1294 AARQDDPAAQY 1304
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 29/182 (15%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----------EMDKKEAAISLYRQA 163
G+ + KNL A + + + A +G A YW + A+ + +A
Sbjct: 591 GKRIPKNLKAACEWYRRAAEQGYATAQ------YWYAHCLQEGTSDAQDVSKALVWFEKA 644
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ P N E A + QA+ GHV+AQY LA CL G G
Sbjct: 645 AKNGNADAQYTLGILNHNGEGIPKNLEAARRWYRQAAEQGHVKAQYWLATCLLEGLGGPE 704
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N +EA Y +AA G +A Y +L Y+ G + A +W+++AA+ G AQ
Sbjct: 705 NPEEAFALYEKAARQGDTKAQYKLALLYTNASGTAKNDAMALQWLEKAAENGDPAAQYRL 764
Query: 271 GL 272
G+
Sbjct: 765 GV 766
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 25/164 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+G N KA D FL+ A + + DA YW + G
Sbjct: 113 GLMYLSGKGTTVNPQKAFDWFLQSARQN----LPDA--QYW----------------LAG 150
Query: 168 DPAAQPANAEEAVKLLYQASIA---GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
A A+ + +Y IA GHV AQ + L L G G+ N +EAA W +AA
Sbjct: 151 CYAKGRGTAKSEREAMYWYRIAAENGHVGAQTGMGLALLYGVGLPQNEKEAAGWLEKAAH 210
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
G +A Y+ Y G GLP + +ARKW+ R+A G +AQL
Sbjct: 211 AGNAQAQYHLYKQYKNGAGLPQNPDEARKWLVRSAKGGWPQAQL 254
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ AG AQY L L G+G N Q+A W+L++A A Y + CY+ G G
Sbjct: 99 EAAKAGEPYAQYFLGLMYLSGKGTTVNPQKAFDWFLQSARQNLPDAQYWLAGCYAKGRGT 158
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
S R+A W + AA+ GH AQ GL G+ +A +LE A AG A +
Sbjct: 159 AKSEREAMYWYRIAAENGHVGAQTGMGLALLYGVGLPQNEKEAAGWLEKAAHAGNAQAQY 218
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL- 166
G ++ G G+ ++ +A + + AA G+ AM +AGL +D + A R A +L
Sbjct: 1235 GILYREGLGLARDDAQAFYWYSQSAASGNVEAMREAGLAL--IDGRGTAKDESRGATLLH 1292
Query: 167 -----GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
DPAAQ P + L +A+ AQY+LA +G V
Sbjct: 1293 AAARQDDPAAQYHLALLYIYGIGLPQDRATGFGWLEKAANGDDEIAQYRLARAYDKGFYV 1352
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ- 267
+ + ++A W +AA+ + A Y+ + Y G G+P H +A W AA GH AQ
Sbjct: 1353 EKDEKKAFYWTEKAAQHDFAEARYDLGMRYQMGLGVPKDHAKAFHWHLLAAKAGHRDAQS 1412
Query: 268 -----LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
E GLG T+ + KA + R G+ A
Sbjct: 1413 ALAFLYEQGLG--TQKDTKKAFYWYTEGARDGDPTA 1446
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +A LL A+ G A + L C GRG + ++A +L+AAE GY A Y T
Sbjct: 1031 NDGKAFALLENAAQTGDPTALHYLGYCYQEGRGTPQDPKKAFASFLQAAEAGYAEAQYMT 1090
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
G G+ + +QA W+++A+ G+ A G LG + KA+ L
Sbjct: 1091 GKALWNGHGVAKNEKQAAFWIEKASRNGNLDASFVLGYMTLLGNGVPKDTGKALDILVPV 1150
Query: 291 TRAGETAADHVKNVI 305
G+ A ++ V+
Sbjct: 1151 AEKGQPEAQNLLGVL 1165
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 21/159 (13%)
Query: 156 AISLYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A +L AA GDP A P + ++A QA+ AG+ AQY L
Sbjct: 1035 AFALLENAAQTGDPTALHYLGYCYQEGRGTPQDPKKAFASFLQAAEAGYAEAQYMTGKAL 1094
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV N ++AA W +A+ G + A + G G+P +A + A+ G
Sbjct: 1095 WNGHGVAKNEKQAAFWIEKASRNGNLDASFVLGYMTLLGNGVPKDTGKALDILVPVAEKG 1154
Query: 263 HGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGE 295
+AQ G+G+ +M A ++ E A R E
Sbjct: 1155 QPEAQNLLGVLYSKGMGVPQNAKM--ACLWFEKAARQDE 1191
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQ 162
+GK G GV +N +A+ K AA+ T A + G + + + E AI +
Sbjct: 332 YGKMLTAGVGVAQNRKEAVLWLEKAAAQDHTEAGLLLGALLFHDESGVADPEKAIPYLKS 391
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD AQ + +A +A+ G +Q LA H G+GV
Sbjct: 392 AAEKGDIQAQNMMGGAYFAGKGVAKDEGQAFIWFEKAAQYGDPLSQLNLARMYHAGQGVA 451
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ +A +W RAAE G A Y Y G G+P ++AR+W+++
Sbjct: 452 KDETKARKWLSRAAENGQPEAQYLLGQAYRDGRGVPEDKQKARQWLEK 499
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
K++K+G G+ +N D+A ++ A G A + + Y + RQ
Sbjct: 222 KQYKNGAGLPQNPDEARKWLVRSAKGGWPQAQLSLAMAY--------LLRYSRQKD---- 269
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
P A++AV+ + +A+ + A + G V ++++AA WY RAAE G
Sbjct: 270 ---NPDEAKQAVQWVEEAAERNDLEATRLMGSLYQSGLAVGVDMKKAAYWYRRAAEAGDA 326
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE----GEMMKAV 284
+ + G G+ + ++A W+++AA H +A L G LF + + KA+
Sbjct: 327 ESQNLYGKMLTAGVGVAQNRKEAVLWLEKAAAQDHTEAGLLLGALLFHDESGVADPEKAI 386
Query: 285 VYLELATRAGETAADHV 301
YL+ A G+ A ++
Sbjct: 387 PYLKSAAEKGDIQAQNM 403
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ AGH AQ LA +G G + ++A WY A G A++ CY G G P
Sbjct: 1402 AAKAGHRDAQSALAFLYEQGLGTQKDTKKAFYWYTEGARDGDPTALFLLGNCYLSGTGTP 1461
Query: 246 LSHRQARKWMKRAADCGHGKAQ 267
+ ++ ++ AA+ G AQ
Sbjct: 1462 IDKKKGLALVREAAERGQPGAQ 1483
>gi|409202098|ref|ZP_11230301.1| hypothetical protein PflaJ_12210, partial [Pseudoalteromonas
flavipulchra JG1]
Length = 737
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV ++ +KA++ A +G+ G+MY E A+ YR A
Sbjct: 61 GVMYEYGQGVAQSDEKAVEYHRLAAEQGNARGQCCLGVMYEYGQGVAQSDEKAVEYYRLA 120
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD AQ + + ++AVK A+ G+ R Q+ + + +G+GV
Sbjct: 121 AEQGDANAQCSLGIMYEFGQGVAQSDKKAVKYYRLAAEQGNARGQFCVGVMYKQGKGVAQ 180
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
+ ++A ++ AAE G R + + Y G+G+ S +A ++ + AA+ G+ + Q
Sbjct: 181 SDEKAVEYFQLAAEQGNARGQFCVGVMYKQGKGVAQSDEKAVEYYQLAAEQGNARGQCCL 240
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAA 298
HG+G+ E KA+ Y +LA GE A
Sbjct: 241 GVMYTHGIGVAQSDE--KAIEYFQLAAEQGEADA 272
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G+GV ++ +KA++ F A +G+ G+MY + E A+ Y+ A
Sbjct: 169 GVMYKQGKGVAQSDEKAVEYFQLAAEQGNARGQFCVGVMYKQGKGVAQSDEKAVEYYQLA 228
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ Q + E+A++ A+ G AQ+ L + RG+GV
Sbjct: 229 AEQGNARGQCCLGVMYTHGIGVAQSDEKAIEYFQLAAEQGEADAQFNLGVMYERGKGVAQ 288
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A +Y AAE G A N + Y G+G+ S +A ++ + AA+ G AQ
Sbjct: 289 SDVKAVEYYQLAAEQGGAEAQCNLGVMYERGKGVAQSDEKAVEYYQLAAEQGDADAQCNL 348
Query: 271 GLGLFTEGEMM-----KAVVYLELATR 292
G+ ++ G+ + KAV Y +LA
Sbjct: 349 GV-MYINGQGVAQSDEKAVEYFQLAAE 374
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+GV ++ +KA++ + A +G+ G+MY Y Q
Sbjct: 25 GVMYRQGKGVAQSDEKAVEYYRLAAEQGNARGQCCLGVMYE-----------YGQGVAQS 73
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D E+AV+ A+ G+ R Q L + G+GV + ++A +Y AAE G
Sbjct: 74 D--------EKAVEYHRLAAEQGNARGQCCLGVMYEYGQGVAQSDEKAVEYYRLAAEQGD 125
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 282
A + + Y FG+G+ S ++A K+ + AA+ G+ + Q G+ ++ +G+ + K
Sbjct: 126 ANAQCSLGIMYEFGQGVAQSDKKAVKYYRLAAEQGNARGQFCVGV-MYKQGKGVAQSDEK 184
Query: 283 AVVYLELATRAGETAADHVKNVILQQ 308
AV Y +LA G V+ +Q
Sbjct: 185 AVEYFQLAAEQGNARGQFCVGVMYKQ 210
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+AV+ A+ G+ R Q L + +G+GV + ++A +Y AAE G R +
Sbjct: 3 EKAVEYYRLAAEQGNARGQCYLGVMYRQGKGVAQSDEKAVEYYRLAAEQGNARGQCCLGV 62
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELA 290
Y +G+G+ S +A ++ + AA+ G+ + Q E+G G+ E KAV Y LA
Sbjct: 63 MYEYGQGVAQSDEKAVEYHRLAAEQGNARGQCCLGVMYEYGQGVAQSDE--KAVEYYRLA 120
Query: 291 TRAGETAA 298
G+ A
Sbjct: 121 AEQGDANA 128
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G + HG GV ++ +KA++ F A +G A + G+MY E K A A+ Y+
Sbjct: 241 GVMYTHGIGVAQSDEKAIEYFQLAAEQGEADAQFNLGVMY-ERGKGVAQSDVKAVEYYQL 299
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + E+AV+ A+ G AQ L + G+GV
Sbjct: 300 AAEQGGAEAQCNLGVMYERGKGVAQSDEKAVEYYQLAAEQGDADAQCNLGVMYINGQGVA 359
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+ ++A ++ AAE RA++ + CY G+G+ S + +
Sbjct: 360 QSDEKAVEYFQLAAEQENARAIFTLAYCYFRGKGVTQSFTETK 402
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA G ++ G+GV ++ KA++ + A +G A + G+MY E
Sbjct: 269 EADAQFNLGVMYERGKGVAQSDVKAVEYYQLAAEQGGAEAQCNLGVMYERGKGVAQSDEK 328
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y+ AA GD AQ + E+AV+ A+ + RA + LA C
Sbjct: 329 AVEYYQLAAEQGDADAQCNLGVMYINGQGVAQSDEKAVEYFQLAAEQENARAIFTLAYCY 388
Query: 203 HRGRGV 208
RG+GV
Sbjct: 389 FRGKGV 394
>gi|323455770|gb|EGB11638.1| hypothetical protein AURANDRAFT_36347 [Aureococcus anophagefferens]
Length = 558
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQ- 172
K+ KA + + G A+V+ G +Y ++DKK+A L+R AA GD AQ
Sbjct: 214 KSDKKAAKIYRRAVELGDVQAIVNLGTLYVTGSGVKLDKKKAE-ELFRMAADRGDAFAQC 272
Query: 173 --------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
EEA + A+ G A+ L C G G + + ++AA+ + RA E
Sbjct: 273 NLGFLLDSEQRFEEAFRYYALAADQGDTGAECNLGCCYRDGDGTEQSAKKAAKLFRRAVE 332
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
G +RAM +L Y GEG+ S+++A + + AAD G Q G EG+ + A
Sbjct: 333 RGNLRAMCALALLYVHGEGVKQSNQKANQLYRIAADRGSALGQCNLGSRYALEGKFVDAA 392
Query: 285 VYLELATRAGETAAD 299
Y +L+ G + A+
Sbjct: 393 RYYKLSAEQGYSKAE 407
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 18/177 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G ++ G G ++ KA F + RG+ AM L+Y + + A LYR A
Sbjct: 307 GCCYRDGDGTEQSAKKAAKLFRRAVERGNLRAMCALALLYVHGEGVKQSNQKANQLYRIA 366
Query: 164 A---------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A LG A +A + ++ G+ +A++ LA C H G GV+ +L+
Sbjct: 367 ADRGSALGQCNLGSRYALEGKFVDAARYYKLSAEQGYSKAEFNLAQCYHHGDGVERDLEI 426
Query: 215 AARWYLRAAEGGYVRAMYNTSLCY-----SFGEGLPLSHRQARKWMKRAADCGHGKA 266
A RW+ RA+ G AMY+ LC + R+A +W++ A GH A
Sbjct: 427 AKRWFARASAKGDSDAMYSLGLCCVDLSGEVTQNTAEHMREAIRWLESAVAAGHETA 483
>gi|188590842|ref|YP_001795442.1| hypothetical protein RALTA_A0047 [Cupriavidus taiwanensis LMG
19424]
gi|170937736|emb|CAP62720.1| conserved hypothetical protein, tetratricopeptide repeats; putative
exported protein [Cupriavidus taiwanensis LMG 19424]
Length = 233
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAV 180
D+AL F A +G+ LA + +M L R AA+P +EA+
Sbjct: 51 FDEALRGFAGAARQGNRLAQFNYAMM------------LLRGEGT----AARP---QEAL 91
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
L +A+ G AQY RG+ V +L+EA RWY RAA+GG+V+A + Y
Sbjct: 92 VWLRKAADNGMTHAQYTWGDLYERGQLVPKSLEEANRWYERAAQGGHVQAQMELATNYFT 151
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAG 294
G G+P + QA W +RAA G G AQ E G + ++ +A ++ A G
Sbjct: 152 GRGVPRDYGQAFAWYQRAASAGDGGAQYIVGSFYERGEPGVVDQDIEQAKIWYARAAARG 211
Query: 295 ETAA 298
+T A
Sbjct: 212 DTGA 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EA++ A+ G+ AQ+ A+ L RG G QEA W +AA+ G A Y
Sbjct: 52 DEALRGFAGAARQGNRLAQFNYAMMLLRGEGTAARPQEALVWLRKAADNGMTHAQYTWGD 111
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATR 292
Y G+ +P S +A +W +RAA GH +AQ+E FT + +A + + A
Sbjct: 112 LYERGQLVPKSLEEANRWYERAAQGGHVQAQMELATNYFTGRGVPRDYGQAFAWYQRAAS 171
Query: 293 AGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
AG+ A ++ ++ D+ + W A
Sbjct: 172 AGDGGAQYIVGSFYERGEPGVVDQDIEQAKIWYA 205
>gi|226329222|ref|ZP_03804740.1| hypothetical protein PROPEN_03125 [Proteus penneri ATCC 35198]
gi|225202408|gb|EEG84762.1| Sel1 repeat protein [Proteus penneri ATCC 35198]
Length = 242
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ 172
+ ++ +KA+ + K A +G +LA + + Y + D E A+ Y +A GD AQ
Sbjct: 8 IDRDAEKAVYWYNKAAVQGVSLAQYNLAVSYDDGDGVEQDHEKAVYWYTKAGEQGDSDAQ 67
Query: 173 -------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ E+AV +A+ GH AQY LA+ G GV+ N +A WY
Sbjct: 68 YNLGISYDEGIGVAQDHEKAVVWYTKAAEQGHSDAQYNLAVSYDDGEGVERNGTKAVFWY 127
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLF 275
+AA G A N + Y G+G+ R+A +W +++A G+G AQ L + G
Sbjct: 128 TKAANQGNRDAQNNLGVMYDEGDGVAKDARKAVEWYRKSAIQGNGLAQNNLALNYYYGKG 187
Query: 276 TEGEMMKAVVYLELATRAGE 295
+ ++ +A + +A G+
Sbjct: 188 VKRDLKEAYAWFAVAVENGD 207
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+AE+AV +A++ G AQY LA+ G GV+ + ++A WY +A E G A YN
Sbjct: 11 DAEKAVYWYNKAAVQGVSLAQYNLAVSYDDGDGVEQDHEKAVYWYTKAGEQGDSDAQYNL 70
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLEL 289
+ Y G G+ H +A W +AA+ GH AQ + + +GE + KAV +
Sbjct: 71 GISYDEGIGVAQDHEKAVVWYTKAAEQGHSDAQYNLAVS-YDDGEGVERNGTKAVFWYTK 129
Query: 290 ATRAGETAADHVKNVILQQLSATSRD 315
A G A + V+ + ++D
Sbjct: 130 AANQGNRDAQNNLGVMYDEGDGVAKD 155
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ G GV ++ +KA+ + K +G + A + G+ Y E E A+ Y +AA
Sbjct: 38 YDDGDGVEQDHEKAVYWYTKAGEQGDSDAQYNLGISYDEGIGVAQDHEKAVVWYTKAAEQ 97
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ N +AV +A+ G+ AQ L + G GV + +
Sbjct: 98 GHSDAQYNLAVSYDDGEGVERNGTKAVFWYTKAANQGNRDAQNNLGVMYDEGDGVAKDAR 157
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
+A WY ++A G A N +L Y +G+G+ ++A W A + G G
Sbjct: 158 KAVEWYRKSAIQGNGLAQNNLALNYYYGKGVKRDLKEAYAWFAVAVENGDG 208
>gi|428173955|gb|EKX42854.1| hypothetical protein GUITHDRAFT_58106, partial [Guillardia theta
CCMP2712]
Length = 212
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYR 161
R G + GRGVR++ +A+ FL+ A A + G +Y + E AI R
Sbjct: 30 RLGMYYLEGRGVRRSTREAV-RFLERAGETVAAAALLLGRLYADGSLVEKNVVMAIGWLR 88
Query: 162 QAAVLGDPAAQP----------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+A LG P A+ A V LL Q + +G V A+ +LA G+GV +
Sbjct: 89 KAQDLGHPGAEKELKSRFQQEVAGRRLKVGLLQQQAASGDVDAKCKLAALHFEGQGVQKD 148
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+A + Y AA GG + AM LCY G G+ S + ++W+ RAA GHG AQLE
Sbjct: 149 EPKAFQLYKEAAVGGQLEAMCCVGLCYLSGRGVKSSVEEGKRWVMRAAYLGHGIAQLE 206
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+I GH AQY+L + GRGV + +EA R+ RA E A+ L Y+ G +
Sbjct: 19 AAIQGHAEAQYRLGMYYLEGRGVRRSTREAVRFLERAGETVAAAALLLGRL-YADGSLVE 77
Query: 246 LSHRQARKWMKRAADCGHGKAQLE 269
+ A W+++A D GH A+ E
Sbjct: 78 KNVVMAIGWLRKAQDLGHPGAEKE 101
>gi|225575064|ref|ZP_03783674.1| hypothetical protein RUMHYD_03153 [Blautia hydrogenotrophica DSM
10507]
gi|225037734|gb|EEG47980.1| Sel1 repeat protein [Blautia hydrogenotrophica DSM 10507]
Length = 521
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +G G ++ +A+ + K A + ++ G Y+ E+A+ Y+ +
Sbjct: 263 GNCYYYGWGTEQDYSEAVKWYQKSADQDNSYGQYMLGECYYNGFGATQDYESAVKWYQAS 322
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A +P Q AN EEA + +A+ G+ Q +L C G GV+
Sbjct: 323 AEQDNPYGQVGLGTCYFFGDGTEANFEEAAQWYEKAAKQGNAVGQNELGACYSSGLGVEE 382
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A W+ +AA G+ + YN Y GEG+ +++A +W ++AA+ G AQ E
Sbjct: 383 DAAKAVEWFQKAANQGHAVSQYNLGKHYYDGEGVERDYQKAVQWYEKAANQGDADAQREL 442
Query: 271 GLGLF----TEGEMMKAVVYLELATRAGETAA 298
G + E + AV + E A G+ +A
Sbjct: 443 GNCYYDGKGVEQDYETAVEWYEKAAEQGDMSA 474
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G+ + +G G ++ + A+ + A + + V G Y+ D EA A Y +A
Sbjct: 299 GECYYNGFGATQDYESAVKWYQASAEQDNPYGQVGLGTCYFFGDGTEANFEEAAQWYEKA 358
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ Q +A +AV+ +A+ GH +QY L + G GV+
Sbjct: 359 AKQGNAVGQNELGACYSSGLGVEEDAAKAVEWFQKAANQGHAVSQYNLGKHYYDGEGVER 418
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Q+A +WY +AA G A CY G+G+ + A +W ++AA+ G AQ
Sbjct: 419 DYQKAVQWYEKAANQGDADAQRELGNCYYDGKGVEQDYETAVEWYEKAAEQGDMSAQ 475
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G + G GV ++ KA++ F K A +G ++ + G Y++ + E A+ Y +A
Sbjct: 371 GACYSSGLGVEEDAAKAVEWFQKAANQGHAVSQYNLGKHYYDGEGVERDYQKAVQWYEKA 430
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A GD AQ +L C + G+GV+ + + A WY +AA
Sbjct: 431 ANQGDADAQR-----------------------ELGNCYYDGKGVEQDYETAVEWYEKAA 467
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
E G + A CY G+G+ R+A +W+ R D
Sbjct: 468 EQGDMSAQEKLIQCYRNGKGVEKDERKAVEWISRLND 504
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +++G V ++ +A + K A +G A G Y Y+ V
Sbjct: 155 GRAYEYGIEVDQDYTEAAKWYEKAAEQGHDGAQNSLGDCY------------YKGQGV-- 200
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N E A K +A+ + AQ L C G GV+ + A +WY ++A+ GY
Sbjct: 201 -----PQNYETAAKWYQKAADQENFYAQSSLGSCYREGNGVERDYAAAMKWYGKSADQGY 255
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
A Y CY +G G + +A KW +++AD
Sbjct: 256 SYAQYYLGNCYYYGWGTEQDYSEAVKWYQKSAD 288
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA K +A+ GH AQ L C ++G+GV N + AA+WY +AA+ A + C
Sbjct: 170 EAAKWYEKAAEQGHDGAQNSLGDCYYKGQGVPQNYETAAKWYQKAADQENFYAQSSLGSC 229
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLE 288
Y G G+ + A KW ++AD G+ AQ G G TE + +AV + +
Sbjct: 230 YREGNGVERDYAAAMKWYGKSADQGYSYAQYYLGNCYYYGWGTEQDYSEAVKWYQ 284
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
YQL G VD + EAA+WY +AAE G+ A + CY G+G+P ++ A KW
Sbjct: 152 YQLGRAYEYGIEVDQDYTEAAKWYEKAAEQGHDGAQNSLGDCYYKGQGVPQNYETAAKWY 211
Query: 256 KRAAD 260
++AAD
Sbjct: 212 QKAAD 216
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 25/192 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA-AVL 166
G + G+GV +N + A + K A + + A G S YR+ V
Sbjct: 191 GDCYYKGQGVPQNYETAAKWYQKAADQENFYAQSSLG-------------SCYREGNGVE 237
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
D AA A+K +++ G+ AQY L C + G G + + EA +WY ++A+
Sbjct: 238 RDYAA-------AMKWYGKSADQGYSYAQYYLGNCYYYGWGTEQDYSEAVKWYQKSADQD 290
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEMMK 282
Y CY G G + A KW + +A+ + Q+ G F TE +
Sbjct: 291 NSYGQYMLGECYYNGFGATQDYESAVKWYQASAEQDNPYGQVGLGTCYFFGDGTEANFEE 350
Query: 283 AVVYLELATRAG 294
A + E A + G
Sbjct: 351 AAQWYEKAAKQG 362
>gi|296120929|ref|YP_003628707.1| Sel1 domain-containing protein repeat-containing protein
[Planctomyces limnophilus DSM 3776]
gi|296013269|gb|ADG66508.1| Sel1 domain protein repeat-containing protein [Planctomyces
limnophilus DSM 3776]
Length = 512
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDP 169
G GV KN+ + A RG+ LAM G +Y AI Y +AA LG P
Sbjct: 264 GSGVAKNVQTCQTHYRTAADRGNALAMKRLGDLYLNNQALPRDLPKAIEWYEKAAKLGQP 323
Query: 170 AAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEA 215
A + ++A++ Q++ AG+ A A GRG V N +
Sbjct: 324 DALNTMGVLYVTGTGVTLDEKKALEYFLQSANAGNPLAMLHAAKFFAMGRGGVKQNFKTY 383
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A W ++A+ GY MY LC+++G+G+ + + A W+++AAD G+ +A+
Sbjct: 384 AAWVRKSADLGYPEGMYEYGLCFAYGDGVKRNDKTAALWIRKAADAGYAQAK 435
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 21/230 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---------W--------EM 150
G + GRGV+ KA D + + AA G+ + Y W E
Sbjct: 114 GNMYHFGRGVKAESTKAFDLYRQSAATGNLTGQTNLARCYLEGKGVTKNWAKGEELLREA 173
Query: 151 DKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
K A ++ AAVL D ++ +A E+ + + QA+ A L G G
Sbjct: 174 AAKNHADAMVTLAAVLIDSRSKKVDAAESFRWMKQAAELQDPEAMTLLGHMYREGVGTSA 233
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N A WY +AA M + CY G G+ + + + + AAD G+ A
Sbjct: 234 NPSSAVEWYRKAAAANDTNGMVGLADCYLLGSGVAKNVQTCQTHYRTAADRGNALAMKRL 293
Query: 271 G-LGLFTEG---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
G L L + ++ KA+ + E A + G+ A + V+ + + D
Sbjct: 294 GDLYLNNQALPRDLPKAIEWYEKAAKLGQPDALNTMGVLYVTGTGVTLDE 343
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV---DAGLMYWEMDKK-EA 155
EAM LL G ++ G G N A++ + K AA T MV D L+ + K +
Sbjct: 216 EAMTLL--GHMYREGVGTSANPSSAVEWYRKAAAANDTNGMVGLADCYLLGSGVAKNVQT 273
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+ YR AA G+ A P + +A++ +A+ G A + +
Sbjct: 274 CQTHYRTAADRGNALAMKRLGDLYLNNQALPRDLPKAIEWYEKAAKLGQPDALNTMGVLY 333
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADC 261
G GV + ++A ++L++A G AM + + ++ G G + + + W++++AD
Sbjct: 334 VTGTGVTLDEKKALEYFLQSANAGNPLAMLHAAKFFAMGRGGVKQNFKTYAAWVRKSADL 393
Query: 262 GHGKAQLEHGLGLFTEGEMMK 282
G+ + E+GL F G+ +K
Sbjct: 394 GYPEGMYEYGL-CFAYGDGVK 413
>gi|290982293|ref|XP_002673865.1| Sel1 domain protein repeat-containing protein [Naegleria gruberi]
gi|284087451|gb|EFC41121.1| Sel1 domain protein repeat-containing protein [Naegleria gruberi]
Length = 404
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 25/182 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
++ +LL W ++ GRGV +N + AL + K A GS A+ G +Y+ D A+S
Sbjct: 119 DSQILLGW--FYESGRGVEENQEMALYWYKKAADNGSVDAIYRCGNVYYMGDDYSNALSW 176
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIA------------------GHVRAQYQLALC 201
+ + LGD A + E + L+Y+ G + +++
Sbjct: 177 FWKGNALGD-----AQSMEKIGLMYRHGFGLKRDLKKAFEYFENSADLGCIDGIFRVGYA 231
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
H G GV + EA +YL AAE G A N + Y G+G+ + + A KW+K A +
Sbjct: 232 FHSGEGVKLDYSEAMEYYLDAAEMGDALAKNNIADMYLKGQGVQQNFQTALKWIKEAMEQ 291
Query: 262 GH 263
G+
Sbjct: 292 GN 293
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 82/217 (37%), Gaps = 36/217 (16%)
Query: 85 SLVCKSWNDA-LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDA 143
+L KS ND L+P ++ G R++ N K + LKGA +G
Sbjct: 33 TLFEKSENDPNLQPELVIELIAVIGDRYES----ENNKQKEFEWRLKGAEKGCPEFQSIV 88
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
G MY D N E+A L +A+ + +Q L
Sbjct: 89 GRMY-------------------DDGNGVEENVEKAFYWLKKAAEGEELDSQILLGWFYE 129
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
GRGV+ N + A WY +AA+ G V A+Y Y G+ + A W + G
Sbjct: 130 SGRGVEENQEMALYWYKKAADNGSVDAIYRCGNVYYMGD----DYSNALSWFWKGNALGD 185
Query: 264 GKA------QLEHGLGLFTEGEMMKAVVYLELATRAG 294
++ HG GL + ++ KA Y E + G
Sbjct: 186 AQSMEKIGLMYRHGFGL--KRDLKKAFEYFENSADLG 220
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW- 148
SW L +A + + G ++HG G++++L KA + F A G + G +
Sbjct: 175 SWFWKGNALGDAQSMEKIGLMYRHGFGLKRDLKKAFEYFENSADLGCIDGIFRVGYAFHS 234
Query: 149 ----EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGH 191
++D EA + Y AA +GD A+ N + A+K + +A G+
Sbjct: 235 GEGVKLDYSEA-MEYYLDAAEMGDALAKNNIADMYLKGQGVQQNFQTALKWIKEAMEQGN 293
Query: 192 VR--AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A Y LC G GV+ + +A + R+++ GY
Sbjct: 294 FDSIATYGEMLC--NGNGVEQDYNKAFDHFKRSSDSGYCE 331
>gi|254000442|ref|YP_003052505.1| Sel1 domain-containing protein repeat-containing protein
[Methylovorus glucosetrophus SIP3-4]
gi|253987121|gb|ACT51978.1| Sel1 domain protein repeat-containing protein [Methylovorus
glucosetrophus SIP3-4]
Length = 255
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQ 185
A VDAG K A ++YR+ A GD AQ N +EAVK
Sbjct: 42 AAVDAG-------KFAQAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRM 94
Query: 186 ASIAGHVRAQYQLALC-LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
++ G AQY L + R GV + EA +WY +AAE G+VR+ N + Y G+ +
Sbjct: 95 SAEQGFAEAQYALGVIYFRRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVV 154
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
P QA KW AA+ G AQ G ++ EGE + A
Sbjct: 155 PQDIPQALKWFGLAAEQGDSDAQFNLG-NMYLEGEGVPA 192
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + + + AG +AQY L L RG GV N QEA +WY +AE G+ A Y +
Sbjct: 51 QAAAMYRELAAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFAEAQYALGVI 110
Query: 238 YSFGE-GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
Y + G+ + + +A KW ++AA+ GH ++QL G+ G ++ +A+ + LA
Sbjct: 111 YFRRDGGVAMDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAE 170
Query: 293 AGETAAD-HVKNVILQ 307
G++ A ++ N+ L+
Sbjct: 171 QGDSDAQFNLGNMYLE 186
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 132 AARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQPA------------- 174
AA G A + GLMY D + A+ YR +A G AQ A
Sbjct: 60 AAAGDAKAQYNLGLMYARGDGVQENPQEAVKWYRMSAEQGFAEAQYALGVIYFRRDGGVA 119
Query: 175 -NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +EA+K +A+ GHVR+Q L + RG V ++ +A +W+ AAE G A +N
Sbjct: 120 MDYDEAIKWYRKAAEQGHVRSQLNLGIVYLRGDVVPQDIPQALKWFGLAAEQGDSDAQFN 179
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADC---GHGKAQLEHGLGLFTEGEM 280
Y GEG+P S W+ AA+ HG++ + ++ E +M
Sbjct: 180 LGNMYLEGEGVPASMVNGYMWIWLAAENPQDAHGRSGKRKKILMYLEAKM 229
>gi|348676736|gb|EGZ16553.1| hypothetical protein PHYSODRAFT_501566 [Phytophthora sojae]
Length = 322
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVLGDPAAQ 172
V ++L++AL + + A G A D G MY + E A+ LYRQAA P A
Sbjct: 139 VPQDLERALHYWTRAAESGHMAASYDLGYMYAQGLHVGQDDEKAVQLYRQAAKQNMPEAH 198
Query: 173 PA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
A +AE+AV +A+ AG+ AQ+ L C GRG++ + +AA+++
Sbjct: 199 RALGAACLHGRGVEQSAEQAVTHFRRAAEAGNALAQFDLGACYMLGRGIEQDHSKAAQFF 258
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
AAEGG +A + + G+G+P +A ++ + AA G
Sbjct: 259 FLAAEGGVPQAQLCLAQLFENGQGIPADREKAVQYYQLAAQGG 301
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 88/225 (39%), Gaps = 54/225 (24%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD-----PA 170
GV+ L KA GA + A V +++W A + R LG A
Sbjct: 49 GVKYLLGKA-----DGAGEVGSAASVHGAVLHW---TNAAELGHVRAQGALGSLYLKGHA 100
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVR 229
P N A + L QA+ AGH + +++ L +G V +L+ A ++ RAAE G++
Sbjct: 101 GIPRNVALATQFLQQAADAGHDGSCHEIGKLLFQGSDEVPQDLERALHYWTRAAESGHMA 160
Query: 230 AMYNTSLCYSFG-------------------EGLPLSHR-----------------QARK 253
A Y+ Y+ G + +P +HR QA
Sbjct: 161 ASYDLGYMYAQGLHVGQDDEKAVQLYRQAAKQNMPEAHRALGAACLHGRGVEQSAEQAVT 220
Query: 254 WMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAG 294
+RAA+ G+ AQ + G LG E + KA + LA G
Sbjct: 221 HFRRAAEAGNALAQFDLGACYMLGRGIEQDHSKAAQFFFLAAEGG 265
>gi|56551033|ref|YP_161872.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56542607|gb|AAV88761.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 418
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 21/235 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G + G+GV + +KA + K A +G+T A G Y++ D ++AA+ +
Sbjct: 90 GSAYYQGKGVPQGYEKAALWWQKAAGQGNTAAQYVLGSAYYQGKGIPRDYEKAALWWQKA 149
Query: 163 AAV--------LGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LG+ Q P + +A+ +A+ GH AQY L ++G GV
Sbjct: 150 AGQGDAAAQYDLGNAYYQGAGVPRDYAKALSWYQKAADQGHAAAQYDLGSAYYQGAGVPQ 209
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
++A W+ +AA+ GY A +N Y G G+P + +A W ++AAD G+ AQ
Sbjct: 210 GYEKAVFWWQKAADQGYAAAQFNLGNAYYQGAGVPQDYAKAVFWYQKAADQGYADAQFNL 269
Query: 271 GLGLFTE----GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
G E + KAV + + A G+ AA + V + + +DRA V
Sbjct: 270 GDAYHDEEGVPQDYAKAVFWYQKAADQGDAAAQNNLGVAYARGAGVPQDRAKAVF 324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G+GV+++ +KA + K A +G A D G Y++ E A +++A
Sbjct: 54 GGAYYQGKGVQRDYEKAAFWYQKAADQGKAEAQYDLGSAYYQGKGVPQGYEKAALWWQKA 113
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AAQ P + E+A +A+ G AQY L ++G GV
Sbjct: 114 AGQGNTAAQYVLGSAYYQGKGIPRDYEKAALWWQKAAGQGDAAAQYDLGNAYYQGAGVPR 173
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A WY +AA+ G+ A Y+ Y G G+P + +A W ++AAD G+ AQ
Sbjct: 174 DYAKALSWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWWQKAADQGYAAAQFNL 233
Query: 271 GLGLFTEG----EMMKAVVYLELATRAG 294
G + + KAV + + A G
Sbjct: 234 GNAYYQGAGVPQDYAKAVFWYQKAADQG 261
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 86/220 (39%), Gaps = 55/220 (25%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV ++ KAL + K A +G A D G Y++ E A+ +++A
Sbjct: 162 GNAYYQGAGVPRDYAKALSWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWWQKA 221
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH------- 203
A G AAQ P + +AV +A+ G+ AQ+ L H
Sbjct: 222 ADQGYAAAQFNLGNAYYQGAGVPQDYAKAVFWYQKAADQGYADAQFNLGDAYHDEEGVPQ 281
Query: 204 -----------------------------RGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
RG GV + +A WY +AA+ G A Y
Sbjct: 282 DYAKAVFWYQKAADQGDAAAQNNLGVAYARGAGVPQDRAKAVFWYQKAADQGDANAQYAL 341
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
Y G G+P SH +A W ++AAD G A E+ LG+
Sbjct: 342 GNAYYQGAGVPQSHEKAVFWWQKAADQGFVAA--EYNLGV 379
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQY L ++G+GV + ++AA WY +AA+ G A Y+ Y G+G+P +
Sbjct: 45 GDADAQYALGGAYYQGKGVQRDYEKAAFWYQKAADQGKAEAQYDLGSAYYQGKGVPQGYE 104
Query: 250 QARKWMKRAADCGHGKAQL 268
+A W ++AA G+ AQ
Sbjct: 105 KAALWWQKAAGQGNTAAQY 123
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + +AV +A+ G AQY L ++G GV + ++A W+ +AA+ G+V A Y
Sbjct: 316 PQDRAKAVFWYQKAADQGDANAQYALGNAYYQGAGVPQSHEKAVFWWQKAADQGFVAAEY 375
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAAD 260
N + Y G+G+ + + W+++AAD
Sbjct: 376 NLGVAYLKGQGIAQDKGRGQFWLQKAAD 403
>gi|163794217|ref|ZP_02188189.1| Sel1-like repeat [alpha proteobacterium BAL199]
gi|159180385|gb|EDP64906.1| Sel1-like repeat [alpha proteobacterium BAL199]
Length = 216
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 156 AISLYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR +A GDP A +EAV +++ AG AQ++L +
Sbjct: 25 AMRWYRDSARAGDPKAMFYLGLTLEQGLQDRPRPQEAVNWYRRSAEAGFALAQFKLGVLY 84
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+ V+ +L +A WY RAA G A YN ++ +G P +A ++AA+ G
Sbjct: 85 QTGQAVERDLAKARAWYERAAGQGMPSAQYNLAVLLETDDGGPADPARALDLYRKAAEFG 144
Query: 263 HGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
+A L G L+ GE ++A+ +L LA AG AA+ ++ +L L T R RA
Sbjct: 145 VSEAFLNLG-NLYARGEGVEADAVEALKWLNLAVDAGVEAAETLRQSVLVVLDETDRARA 203
Query: 318 MLVVDSWRA 326
D W++
Sbjct: 204 REEADRWKS 212
>gi|83644132|ref|YP_432567.1| hypothetical protein HCH_01274 [Hahella chejuensis KCTC 2396]
gi|83632175|gb|ABC28142.1| FOG: TPR repeat, SEL1 subfamily [Hahella chejuensis KCTC 2396]
Length = 237
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
H AQ+ LA+ +GRG + NL++AA WY AAE G+ A N + Y+ G G+P +++
Sbjct: 55 HPDAQFLLAMMYEKGRGTEANLEKAAEWYKAAAEQGHPSAQNNLAQLYNQGRGVPQDYKE 114
Query: 251 ARKWMKRAADCGHGKAQLEHGLGL-FTEGE 279
A KW +AA G+ AQ + L L + +GE
Sbjct: 115 AVKWFSKAAGSGNATAQ--YNLALRYAKGE 142
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 117 VRKN-LDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDPAA 171
++KN +DKA D A + A +MY + EA A Y+ AA G P+A
Sbjct: 35 IKKNDMDKAFDGLQVLANQKHPDAQFLLAMMYEKGRGTEANLEKAAEWYKAAAEQGHPSA 94
Query: 172 Q-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
Q P + +EAVK +A+ +G+ AQY LAL +G GV+ NL +A
Sbjct: 95 QNNLAQLYNQGRGVPQDYKEAVKWFSKAAGSGNATAQYNLALRYAKGEGVEKNLSKAFEL 154
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
Y +AE V +N + Y+ GEG + +A +W +A+
Sbjct: 155 YRSSAEQNNVFGQFNLAYSYATGEGTDKNMVEALRWAMLSAE 196
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN E+A + A+ GH AQ LA ++GRGV + +EA +W+ +AA G A YN
Sbjct: 74 ANLEKAAEWYKAAAEQGHPSAQNNLAQLYNQGRGVPQDYKEAVKWFSKAAGSGNATAQYN 133
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLEL 289
+L Y+ GEG+ + +A + + +A+ + Q + G T+ M++A+ + L
Sbjct: 134 LALRYAKGEGVEKNLSKAFELYRSSAEQNNVFGQFNLAYSYATGEGTDKNMVEALRWAML 193
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+ A + + ++S +A + + WR
Sbjct: 194 SAEKKFPRAIQFVSFLGSKMSQEEISKAEALANEWR 229
>gi|150005685|ref|YP_001300429.1| hypothetical protein BVU_3175 [Bacteroides vulgatus ATCC 8482]
gi|149934109|gb|ABR40807.1| TPR repeat protein [Bacteroides vulgatus ATCC 8482]
Length = 307
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K ++ A + L +A + G +K+G GVRK+ A+ +L+ A G+T AM
Sbjct: 118 VTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAM 177
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+ G +Y + P + EEA +A+ + AQY +
Sbjct: 178 NNIGYLY-------------------KNGLGVPQDFEEAFFWFKKAADKNNPIAQYNIGN 218
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G G++ + + A W +AA G A YN Y +G+G+ +QAR W ++A D
Sbjct: 219 MYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAID 278
Query: 261 CGHGKAQ 267
GH KA+
Sbjct: 279 NGHEKAK 285
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 92/235 (39%), Gaps = 21/235 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + AA G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + +W+ +AA G+ AQ
Sbjct: 193 DFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
G G E ++ +A + + A G A I LS + +L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEAPLLFT 307
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 253 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|189346826|ref|YP_001943355.1| Sel1 domain-containing protein repeat-containing protein
[Chlorobium limicola DSM 245]
gi|189340973|gb|ACD90376.1| Sel1 domain protein repeat-containing protein [Chlorobium limicola
DSM 245]
Length = 341
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G+GV+++ +A F K A + LA G+MY+ + D EAA + +R+
Sbjct: 157 GLMYYSGQGVKQDYVEAATWFRKAAVQEFALAQNSLGVMYYTGQGVKQDHAEAA-TWFRK 215
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G A+ + EA +A++ G AQ + + + G+GV+
Sbjct: 216 AAGHGLSVAENKLGLMYYTGQSVKQDYTEAAGWFRKAAVKGLAEAQLNIGMQYYAGQGVN 275
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ EAA WY +AAE G A YN Y G G+ ++AR+W K+A + G+
Sbjct: 276 QDYTEAAGWYRKAAEQGLAEAQYNLGAVYLNGSGITKDEQKAREWYKKACNNGY 329
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G+GV+++ +AL + A + A V G+MY+ + D EAA + +R+
Sbjct: 49 GLLYYTGQGVKRDYVEALRWYRMAAEQQRAWAQVSLGVMYYTGQGVKQDHAEAA-TWFRK 107
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G P + + EA +A+ G AQ +L L + G+GV
Sbjct: 108 AAEQGLPKGEYYLGVVYEKGQGVKQDHAEAATWFRRAAGQGLAEAQNKLGLMYYSGQGVK 167
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EAA W+ +AA + A + + Y G+G+ H +A W ++AA GHG + E
Sbjct: 168 QDYVEAATWFRKAAVQEFALAQNSLGVMYYTGQGVKQDHAEAATWFRKAA--GHGLSVAE 225
Query: 270 HGLGL-FTEGEMMK 282
+ LGL + G+ +K
Sbjct: 226 NKLGLMYYTGQSVK 239
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G+GV+++ +A F + A +G A GLMY+ + D EAA + +R+
Sbjct: 121 GVVYEKGQGVKQDHAEAATWFRRAAGQGLAEAQNKLGLMYYSGQGVKQDYVEAA-TWFRK 179
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AAV AQ + + EA +A+ G A+ +L L + G+ V
Sbjct: 180 AAVQEFALAQNSLGVMYYTGQGVKQDHAEAATWFRKAAGHGLSVAENKLGLMYYTGQSVK 239
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ EAA W+ +AA G A N + Y G+G+ + +A W ++AA+ G +AQ
Sbjct: 240 QDYTEAAGWFRKAAVKGLAEAQLNIGMQYYAGQGVNQDYTEAAGWYRKAAEQGLAEAQYN 299
Query: 270 HG 271
G
Sbjct: 300 LG 301
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L + + G+GV + EAA W+ +AAE G + Y + Y G+G+ H +A
Sbjct: 80 AQVSLGVMYYTGQGVKQDHAEAATWFRKAAEQGLPKGEYYLGVVYEKGQGVKQDHAEAAT 139
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELAT 291
W +RAA G +AQ + GL ++ G+ +K Y+E AT
Sbjct: 140 WFRRAAGQGLAEAQNKLGL-MYYSGQGVKQ-DYVEAAT 175
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 172 QPANAEEAVKLLYQASI------AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
QPA A + LL S G+ AQ +L L + G+GV + EA RWY AAE
Sbjct: 16 QPAGARCEIPLLDNISQLQKEAQQGNAVAQNKLGLLYYTGQGVKRDYVEALRWYRMAAEQ 75
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A + + Y G+G+ H +A W ++AA+ G K + G+ ++ +G+ +K
Sbjct: 76 QRAWAQVSLGVMYYTGQGVKQDHAEAATWFRKAAEQGLPKGEYYLGV-VYEKGQGVK 131
>gi|384411625|ref|YP_005620990.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931999|gb|AEH62539.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 455
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EA 155
EA+ L G + GRGV +N ++ LD F K A + + A + G Y + + K E
Sbjct: 226 EALTAL--GVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEK 283
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLY------------------QASIAGHVRAQYQ 197
A+ Y++AA GD A AE + L Y +A+ GHV+AQ
Sbjct: 284 AVYWYQKAADKGD-----AEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLN 338
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ ++ RGV + Y +AAE G +A YN ++ Y G G P Q+ W +R
Sbjct: 339 MGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEPKDLAQSIYWFQR 398
Query: 258 AADCGHGKAQLEHGLGLFT---EG---EMMKAVVYLELATRAGETAA 298
AA HG+ ++ LG F EG + +A+ +LE A G+ A
Sbjct: 399 AAS--HGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEA 443
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 74 ASFTLPQ--LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKG 131
A LP+ +A +L K A R + A + G ++ G GV+++ KA+ + K
Sbjct: 164 AGIMLPRDDKKAVALFMK----ADRQVYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKA 219
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH 191
A +G A+ G+ Y M + P N E + +A+
Sbjct: 220 ADQGDGEALTALGVFY--MTGR-----------------GVPQNYERGLDCFRKAADKDV 260
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
A+ L G GV + ++A WY +AA+ G A YN L Y GEG+ +A
Sbjct: 261 SAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKA 320
Query: 252 RKWMKRAADCGHGKAQLEHGLGLF 275
W K+AAD GH KAQL G +
Sbjct: 321 AFWYKKAADQGHVKAQLNMGFAYY 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++HG GV K+ +KA+ + K A +G A + GL Y D +AA Y++
Sbjct: 268 GNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAF-WYKK 326
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + + L +A+ G +A+Y LA+ + G G
Sbjct: 327 AADQGHVKAQLNMGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEP 386
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+L ++ W+ RAA G + A YN Y GEG+P +A W+++AA G +AQ
Sbjct: 387 KDLAQSIYWFQRAASHGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEAQ 444
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+QAA GD AAQ P +A A +A+ G AQY LA G G
Sbjct: 36 KQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYATGEG 95
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++AA WY +AAE G A YN +L Y G+G+ ++ +A W+K+AAD KA+
Sbjct: 96 VAQSDKQAAFWYEKAAEQGIDEAEYNLALAYEQGKGVEQNYERALFWLKKAADQNFFKAE 155
Query: 268 LEHGL 272
GL
Sbjct: 156 THLGL 160
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L QA+ AG + AQ L L + G V + AA W+ +AA G+ A YN + Y+ GE
Sbjct: 35 LKQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYATGE 94
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
G+ S +QA W ++AA+ G +A E+ L L E
Sbjct: 95 GVAQSDKQAAFWYEKAAEQGIDEA--EYNLALAYE 127
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N ++AL K A + A GL Y +A I L
Sbjct: 126 YEQGKGVEQNYERALFWLKKAADQNFFKAETHLGLAY------QAGIML----------- 168
Query: 171 AQPANAEEAVKLLYQAS-IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P + ++AV L +A + AQ L RG GV + Q+A +Y +AA+ G
Sbjct: 169 --PRDDKKAVALFMKADRQVYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGE 226
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKA 283
A+ + Y G G+P ++ + ++AAD A+ HG G+ + E KA
Sbjct: 227 ALTALGVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDE--KA 284
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
V + + A G+ A++ + ++ S+D A
Sbjct: 285 VYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDA 318
>gi|304320118|ref|YP_003853761.1| Sel1-like repeat protein [Parvularcula bermudensis HTCC2503]
gi|303299021|gb|ADM08620.1| Sel1-like repeat protein [Parvularcula bermudensis HTCC2503]
Length = 411
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGD 168
G+GV K+L +A + F A+ G TLA G+MY E + A L AA G+
Sbjct: 102 DGQGVEKDLTRAAEWFNLAASAGHTLAKTRLGIMYAEGLSVPQDPQRAAQLLEAAAEEGN 161
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P AQ P N A K A+ G + Y AL L GR +L EA
Sbjct: 162 PTAQFRLGRLYLEGEGLPTNYRLAAKWFRAAADQGDAESMYNYALLLESGRVGGADLSEA 221
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
W RAAE G + A + L G G+ S ++A KW + +A+ G + + +GL
Sbjct: 222 VVWMRRAAEAGVLPAKVSMGLLAFNGRGMERSDQEALKWFRESANEGSPEGMFLYAVGL- 280
Query: 276 TEGEMMKAVV--YLELATRAGETAADHVKNVILQQLS 310
TEG + L ATRA E + D + +++++
Sbjct: 281 TEGLAGDPQLDEALRWATRAVEASTDEPRQAQIERVA 317
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 40/158 (25%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA------ 230
++ + L +A+ G V AQY L G+GV+ +L AA W+ AA G+ A
Sbjct: 75 QKGIGLYVRAASNGQVNAQYALGDLAFDGQGVEKDLTRAAEWFNLAASAGHTLAKTRLGI 134
Query: 231 MYNTSLC------------------------------YSFGEGLPLSHRQARKWMKRAAD 260
MY L Y GEGLP ++R A KW + AAD
Sbjct: 135 MYAEGLSVPQDPQRAAQLLEAAAEEGNPTAQFRLGRLYLEGEGLPTNYRLAAKWFRAAAD 194
Query: 261 CGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
G ++ + L G ++ +AVV++ A AG
Sbjct: 195 QGDAESMYNYALLLESGRVGGADLSEAVVWMRRAAEAG 232
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L G+GV +LQ+ Y+RAA G V A Y G+G+ +A +W
Sbjct: 58 YILGALYTNGQGVAQDLQKGIGLYVRAASNGQVNAQYALGDLAFDGQGVEKDLTRAAEWF 117
Query: 256 KRAADCGHGKAQLEHGLGLFTEG 278
AA GH A+ G+ ++ EG
Sbjct: 118 NLAASAGHTLAKTRLGI-MYAEG 139
>gi|421653723|ref|ZP_16094055.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408512425|gb|EKK14068.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 230
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K++ +A + F K A + A + ++Y D+ G
Sbjct: 83 GMMYFTGTGVEKDMKRAFEYFAKAADKSHAKAQYNLAVLY---DR--------------G 125
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AQ N E+A + +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 126 EGTAQ--NYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A YN + Y GEG P + + A+KW ++AAD G+
Sbjct: 184 RDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGN 219
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY+ E
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEK------------------- 94
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ + A + +A+ H +AQY LA+ RG G N ++A WY RAAE GY A YN
Sbjct: 95 DMKRAFEYFAKAADKSHAKAQYNLAVLYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S QA KW +AA+ H + ++ L ++ GE L+LA +
Sbjct: 155 AHLYKKGHGVAQSDEQALKWYTKAAE--HNERDAQYNLAQMYLNGEGTPKN--LQLAKKW 210
Query: 294 GETAAD 299
+ AAD
Sbjct: 211 FQQAAD 216
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 190 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY L + L G +GV N ++A +W A + G V A Y+ + Y G G+
Sbjct: 37 GQSVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDM 96
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++A ++ +AAD H KAQ + L+ GE
Sbjct: 97 KRAFEYFAKAADKSHAKAQYNLAV-LYDRGE 126
>gi|429753148|ref|ZP_19285964.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429174242|gb|EKY15724.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 807
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 24/195 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA ++ G+ + +G+GV ++ KA++ F K AA+G+ A+ Y
Sbjct: 213 EAQAMI--GESYLNGKGVEQSESKAIEWFEKAAAKGNATALYHLANFY-----------F 259
Query: 160 YRQAAVLGD-PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
Y + ++G P ++A+ QA+ G+V AQ QLA+CL+ G G + ++A W
Sbjct: 260 YGNSPLIGKFP-------KKALDYYTQAANKGNVDAQRQLAVCLYNGIGGTASQRDAFNW 312
Query: 219 YLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
L+A N ++CY+ G G S QA + ++AAD G AQ G L E
Sbjct: 313 ILKAVNANPSPITENNLAVCYATGNGTRQSVAQAVELFRKAADAGDVAAQYNLGALLLEE 372
Query: 278 --GEMMKAVVYLELA 290
++ KA YLE A
Sbjct: 373 PQQDVKKAFEYLEKA 387
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ +VK L + + G V+AQ +LA +G+GV + Q+AA W + AE G +A Y +
Sbjct: 20 DTSVKKLMKLAEKGDVKAQSELAEAYLKGKGVKRSFQDAALWLEKVAETGDAQAQYQLAH 79
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ G+G+P S + +W+ +AA+ G+ KA+ E L
Sbjct: 80 LHLDGKGMPKSEEKGTEWLAKAAENGNQKAEQELAL 115
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV +A+ + QY+L C + G G++ + ++AA +Y RAA GY A + C
Sbjct: 708 QAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRLGNC 767
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKA 266
Y GEG+ S +A W +A D G +A
Sbjct: 768 YYHGEGIQQSDTRAIDWFDQACDSGEKQA 796
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ 185
+++LKG +G + DA L ++ + A + Y+ A + D P + E+ + L +
Sbjct: 43 EAYLKG--KGVKRSFQDAALWLEKVAETGDAQAQYQLAHLHLDGKGMPKSEEKGTEWLAK 100
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G+ +A+ +LALC GRGV + ++ W + A+ + + + Y G+G+
Sbjct: 101 AAENGNQKAEQELALCYRDGRGVPQSTEKYYAWIEKNADKEKAETLLDLAKAYYAGDGVT 160
Query: 246 LSHRQARKWMKRAADCGHGKAQL 268
+A+ W +AA G+ +A+L
Sbjct: 161 KDVNKAKFWADKAAKKGNKEAEL 183
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ GRGV ++ +K K A + ++D Y+ D ++ +A D A
Sbjct: 117 YRDGRGVPQSTEKYYAWIEKNADKEKAETLLDLAKAYYAGDGVTKDVN---KAKFWADKA 173
Query: 171 AQPANAE-----------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A+ N E EA++ L Q + G AQ + G+GV+ +
Sbjct: 174 AKKGNKEAELLLATWVYEINPSNPEAIQRLMQVAEKGDTEAQAMIGESYLNGKGVEQSES 233
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK---WMKRAADCGHGKAQLEH 270
+A W+ +AA G A+Y+ + Y +G PL + +K + +AA+ G+ AQ +
Sbjct: 234 KAIEWFEKAAAKGNATALYHLANFYFYGNS-PLIGKFPKKALDYYTQAANKGNVDAQRQL 292
Query: 271 GLGLFT 276
+ L+
Sbjct: 293 AVCLYN 298
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 29/137 (21%)
Query: 156 AISLYRQAAVLGDPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
A+ L+R+AA GD AAQ + ++A + L +A+ H+ A +L
Sbjct: 346 AVELFRKAADAGDVAAQYNLGALLLEEPQQDVKKAFEYLEKAAAQNHLLALKKLGDLNFT 405
Query: 205 GRGVDFNLQEAARWYLRAAE------------------GGYVRAMYNTSLCYSFGEGLPL 246
G+ + + A +Y +AA+ Y ++ S CY+ G+G+
Sbjct: 406 GKYTNQSYTRAFEYYNKAAKLTPTPENQMLDYFYQGQADAYADVLFTLSQCYADGKGVKK 465
Query: 247 SHRQARKWMKRAADCGH 263
S +A KW +AAD H
Sbjct: 466 SPHEAAKWAMKAADLSH 482
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE- 269
+ +A Y +AA Y Y CY G GL S+ +A + KRAA G+ AQ
Sbjct: 705 DFGQAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRL 764
Query: 270 -----HGLGLFTEGEMMKAVVYLELATRAGETAA 298
HG G+ + +A+ + + A +GE A
Sbjct: 765 GNCYYHGEGI--QQSDTRAIDWFDQACDSGEKQA 796
>gi|307610906|emb|CBX00523.1| TPR repeat protein [Legionella pneumophila 130b]
Length = 305
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G+ N +A+ K A +G A G++Y AI +R+A
Sbjct: 120 GVLYIEGIGISHNDGEAVKWIHKAAEQGFPDAERTLGILYLTGKGVKQNDGEAIIWFRKA 179
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
GD A+Q N EA++ Y A+ G AQY +A+ G+G+
Sbjct: 180 GEHGDLASQRTLSAMYVEGNHTQQNDFEAMRWFYLAAKQGDPIAQYNIAIGFLVGKGMKQ 239
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N EA +W+ AA G +A Y + Y G+G+P +H +A KW+++AA+ G+ AQ
Sbjct: 240 NNIEAMKWFHLAANQGLPQAQYALAAIYHDGQGVPQNHDEALKWLQKAAEQGYPAAQ 296
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V +N +A+ F K A +G T+A + GL Y A+ +R+A
Sbjct: 48 GIDYMIGKKVPQNYSEAVKWFQKAAEQGDTMAQRNLGLTYTTGTGVAQNHSKAMKWFRKA 107
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A DP A+ N EAVK +++A+ G A+ L + G+GV
Sbjct: 108 AEKNDPVAEFNLGVLYIEGIGISHNDGEAVKWIHKAAEQGFPDAERTLGILYLTGKGVKQ 167
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EA W+ +A E G + + S Y G + +A +W AA G AQ
Sbjct: 168 NDGEAIIWFRKAGEHGDLASQRTLSAMYVEGNHTQQNDFEAMRWFYLAAKQGDPIAQYNI 227
Query: 271 GLGLFTEGEMMK-----AVVYLELATRAG 294
+G F G+ MK A+ + LA G
Sbjct: 228 AIG-FLVGKGMKQNNIEAMKWFHLAANQG 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N EAVK +A+ G AQ L L G GV N +A +W+ +AAE A +
Sbjct: 58 PQNYSEAVKWFQKAAEQGDTMAQRNLGLTYTTGTGVAQNHSKAMKWFRKAAEKNDPVAEF 117
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYL 287
N + Y G G+ + +A KW+ +AA+ G A+ G+ L+ G+ +K A+++
Sbjct: 118 NLGVLYIEGIGISHNDGEAVKWIHKAAEQGFPDAERTLGI-LYLTGKGVKQNDGEAIIWF 176
Query: 288 ELATRAGETAA 298
A G+ A+
Sbjct: 177 RKAGEHGDLAS 187
>gi|423315265|ref|ZP_17293196.1| hypothetical protein HMPREF1058_03808 [Bacteroides vulgatus
CL09T03C04]
gi|392680282|gb|EIY73655.1| hypothetical protein HMPREF1058_03808 [Bacteroides vulgatus
CL09T03C04]
Length = 307
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 87 VCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V K ++ A + L +A + G +K+G GVRK+ A+ +L+ A G+T AM
Sbjct: 118 VTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAM 177
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+ G +Y + P + EEA +A+ + AQY +
Sbjct: 178 NNIGYLY-------------------KNGLGVPQDFEEAYFWFKKAADKNNPIAQYNIGN 218
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G G++ + + A W +AA G A YN Y +G+G+ +QAR W ++A D
Sbjct: 219 MYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAID 278
Query: 261 CGHGKAQ 267
GH KA+
Sbjct: 279 NGHEKAK 285
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 92/235 (39%), Gaps = 21/235 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + AA G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + +W+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
G G E ++ +A + + A G A I LS + +L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEDPLLFT 307
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 253 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|260753304|ref|YP_003226197.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552667|gb|ACV75613.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 455
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EA 155
EA+ L G + GRGV +N ++ LD F K A + + A + G Y + + K E
Sbjct: 226 EALTAL--GVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEK 283
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLY------------------QASIAGHVRAQYQ 197
A+ Y++AA GD A AE + L Y +A+ GHV+AQ
Sbjct: 284 AVYWYQKAADKGD-----AEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLN 338
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ ++ RGV + Y +AAE G +A YN ++ Y G G P Q+ W +R
Sbjct: 339 MGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEPKDLAQSIYWFQR 398
Query: 258 AADCGHGKAQLEHGLGLFT---EG---EMMKAVVYLELATRAGETAA 298
AA HG+ ++ LG F EG + +A+ +LE A G+ A
Sbjct: 399 AAS--HGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEA 443
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++HG GV K+ +KA+ + K A +G A + GL Y D +AA Y++
Sbjct: 268 GNAYRHGYGVPKDDEKAVYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDAKAAF-WYKK 326
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + + L +A+ G +A+Y LA+ + G G
Sbjct: 327 AADQGHVKAQLNMGFAYYQARGVAQDYARGIFLYRKAAEQGDSKAEYNLAIAYYNGVGEP 386
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+L ++ W+ RAA G + A YN Y GEG+P +A W+++AA G +AQ
Sbjct: 387 KDLAQSIYWFQRAASHGEMSAQYNLGAFYMRGEGVPKDRNEAIFWLEKAAAQGDVEAQ 444
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV+++ KA+ + K A +G A+ G+ Y M +
Sbjct: 196 GNAYRRGAGVKQDDQKAVSYYQKAADQGDGEALTALGVFY--MTGR-------------- 239
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N E + +A+ A+ L G GV + ++A WY +AA+ G
Sbjct: 240 ---GVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDEKAVYWYQKAADKGD 296
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A YN L Y GEG+ +A W K+AAD GH KAQL G +
Sbjct: 297 AEAEYNLGLAYRKGEGISQDDAKAAFWYKKAADQGHVKAQLNMGFAYY 344
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+QAA GD AAQ P +A A +A+ G AQY LA G G
Sbjct: 36 KQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYSTGEG 95
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++AA WY +AAE G A YN +L Y G+G+ ++ +A W+K+AAD KA+
Sbjct: 96 VAQSDKQAAFWYEKAAEQGIDEAEYNLALAYEQGKGVEQNYERALFWLKKAADQNFFKAE 155
Query: 268 LEHGL 272
GL
Sbjct: 156 THLGL 160
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L QA+ AG + AQ L L + G V + AA W+ +AA G+ A YN + YS GE
Sbjct: 35 LKQAAEAGDIAAQSNLGLAYYVGAAVPKDAAMAAFWFEKAASKGFSAAQYNLAGLYSTGE 94
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
G+ S +QA W ++AA+ G +A E+ L L E
Sbjct: 95 GVAQSDKQAAFWYEKAAEQGIDEA--EYNLALAYE 127
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N ++AL K A + A GL Y +A I L
Sbjct: 126 YEQGKGVEQNYERALFWLKKAADQNFFKAETHLGLAY------QAGIML----------- 168
Query: 171 AQPANAEEAVKLLYQAS-IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P + ++AV L +A A + AQ L RG GV + Q+A +Y +AA+ G
Sbjct: 169 --PRDDKKAVALFMKADRQAYYAEAQMALGNAYRRGAGVKQDDQKAVSYYQKAADQGDGE 226
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKA 283
A+ + Y G G+P ++ + ++AAD A+ HG G+ + E KA
Sbjct: 227 ALTALGVFYMTGRGVPQNYERGLDCFRKAADKDVSAAEDNLGNAYRHGYGVPKDDE--KA 284
Query: 284 VVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
V + + A G+ A++ + ++ S+D A
Sbjct: 285 VYWYQKAADKGDAEAEYNLGLAYRKGEGISQDDA 318
>gi|445496963|ref|ZP_21463818.1| Sel1 domain protein repeat-containing protein [Janthinobacterium
sp. HH01]
gi|444786958|gb|ELX08506.1| Sel1 domain protein repeat-containing protein [Janthinobacterium
sp. HH01]
Length = 461
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 96/232 (41%), Gaps = 59/232 (25%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G+ + HGRGVR+N AL F K A + A ++ GLMY + + +A A++ YRQA
Sbjct: 141 GEAYVHGRGVRRNYPLALAWFRKAALQNDASAQLNLGLMYRNGHGVARNDAQALAWYRQA 200
Query: 164 AVLGDPAAQ-------------------------------PANA---------------- 176
A G AQ A+A
Sbjct: 201 AAQGCAVAQRMVGVAYAEGLGVAPDLLRAYAWLLRAAEQEDADAQFNLGIMLANGKGVDR 260
Query: 177 --EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
E A +A+ +GH AQY L RGRGV + Q A WY AAE G A +N
Sbjct: 261 DDELAFTWYRRAAESGHALAQYNLGGMYARGRGVQRDEQRALEWYRMAAEQGAPNAQFNV 320
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEM 280
+ Y+ G+G+ +A W + AA+ G AQ HGLG+ + E+
Sbjct: 321 GVMYANGQGVAKDEARAVAWYRCAAEQGDASAQNNLGVMYAHGLGVACDEEV 372
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 21/245 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G+ V ++ +A LK A +G A G+MY+ + A+ +R A
Sbjct: 33 GLVYKKGQDVARDDTRAFYWMLKAAQQGLAFAQNHLGVMYYNGRGVASNDKEAVRWFRAA 92
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ G+ +AQ N E A+ Y+AS G AQ L GRGV
Sbjct: 93 ALQGEVSAQQNLGQMYKKGRGVARNDETALSWFYRASEQGVASAQTLLGEAYVHGRGVRR 152
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N A W+ +AA A N L Y G G+ + QA W ++AA G AQ
Sbjct: 153 NYPLALAWFRKAALQNDASAQLNLGLMYRNGHGVARNDAQALAWYRQAAAQGCAVAQRMV 212
Query: 271 GL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
G+ GL ++++A +L A + A ++L RD + RA
Sbjct: 213 GVAYAEGLGVAPDLLRAYAWLLRAAEQEDADAQFNLGIMLANGKGVDRDDELAFTWYRRA 272
Query: 327 MPSLH 331
S H
Sbjct: 273 AESGH 277
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 54/232 (23%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---------- 149
+A L G +++G GV +N +AL + + AA+G +A G+ Y E
Sbjct: 169 DASAQLNLGLMYRNGHGVARNDAQALAWYRQAAAQGCAVAQRMVGVAYAEGLGVAPDLLR 228
Query: 150 -------MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
++E A + + +L + + E A +A+ +GH AQY L
Sbjct: 229 AYAWLLRAAEQEDADAQFNLGIMLANGKGVDRDDELAFTWYRRAAESGHALAQYNLGGMY 288
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP----------------- 245
RGRGV + Q A WY AAE G A +N + Y+ G+G+
Sbjct: 289 ARGRGVQRDEQRALEWYRMAAEQGAPNAQFNVGVMYANGQGVAKDEARAVAWYRCAAEQG 348
Query: 246 -------------------LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A W +RAA+ GH AQ G++ G
Sbjct: 349 DASAQNNLGVMYAHGLGVACDEEVAVSWYRRAAEQGHALAQFNLA-GMYGSG 399
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
YR+AA GDP AQ + A + +A+ G AQ L + + GR
Sbjct: 17 YREAAERGDPYAQFNLGLVYKKGQDVARDDTRAFYWMLKAAQQGLAFAQNHLGVMYYNGR 76
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
GV N +EA RW+ AA G V A N Y G G+ + A W RA++ G A
Sbjct: 77 GVASNDKEAVRWFRAAALQGEVSAQQNLGQMYKKGRGVARNDETALSWFYRASEQGVASA 136
Query: 267 Q 267
Q
Sbjct: 137 Q 137
>gi|195449906|ref|XP_002072278.1| GK22768 [Drosophila willistoni]
gi|194168363|gb|EDW83264.1| GK22768 [Drosophila willistoni]
Length = 817
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F + A G+ + G +Y E ++ E A + +A+
Sbjct: 335 YQGGKAIQQDHQKALEYFTQAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 394
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+GDP Q P + +A+ QA+ G V Q QL G GV +
Sbjct: 395 MGDPVGQSGLGLMYLKGLGMPKDTNKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 454
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G +L H
Sbjct: 455 KLAMKYFNLATQSGHVLAYYNLGVMHAYGMGMLRSCPAAVEFFKNVAERGRWSTRLMHAY 514
Query: 273 GLFTEGEMMKAVVYLELATRAGETAA 298
+ + + +A + L G A
Sbjct: 515 SDYKQNRIDEAYMQYALMAEVGYEVA 540
>gi|344924771|ref|ZP_08778232.1| hypothetical protein COdytL_09001 [Candidatus Odyssella
thessalonicensis L13]
Length = 1945
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +GRG ++ KA+ K A + + A GLMY E D AA L +
Sbjct: 1432 GLMYANGRGTEQDYAKAIYWLGKAAQQRNVNAQFMLGLMYASGRGVEQDYTNAAYWL-GE 1490
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GDP AQ N E+A+ L +A G++ AQ L+L G+GV
Sbjct: 1491 AAQQGDPDAQLRLGFMHLNGLGVDMNGEKAIDWLTRAGEQGNLEAQNSLSLMYLNGQGVK 1550
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +AA W++ AA+ G A + Y G G+ QA W +A + G+ AQL
Sbjct: 1551 QDDTKAAYWFIAAAQQGDSDAQFRLGFMYLNGRGVGKDEDQAIVWFLKAVEQGNAYAQLN 1610
Query: 270 HGLGLFTEGEMMK 282
GL ++ G+ +K
Sbjct: 1611 LGL-MYANGQSVK 1622
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 21/195 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQA----- 163
G G K+ DKA+ + K A +G+ A + GLMY + D +AA L + A
Sbjct: 1258 GEGAAKDEDKAIRLYTKAAEQGNASAQSNLGLMYMNGQGVDKDDTKAAYWLAKAAKQGNA 1317
Query: 164 -------AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
A+ G + +A++ +A+ + AQY L + G+G++ N A
Sbjct: 1318 FAQTNLGAMYGKGQGVKQDDTKAIEWYTKAAQQENAGAQYNLGVSYLSGQGIEQNYGNAF 1377
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL---- 272
W +AAE G A Y L Y G+G+ +A+ +AA+ G+ AQ GL
Sbjct: 1378 YWLTKAAEQGIADAQYTLGLMYLKGQGIKQDDTRAKDLFIQAAEQGNADAQNNLGLMYAN 1437
Query: 273 GLFTEGEMMKAVVYL 287
G TE + KA+ +L
Sbjct: 1438 GRGTEQDYAKAIYWL 1452
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +GRGV K+ D+A+ FLK +G+ A ++ GLMY S+ R A
Sbjct: 1573 FRLGFMYLNGRGVGKDEDQAIVWFLKAVEQGNAYAQLNLGLMY------ANGQSVKRDYA 1626
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
EA+ L ++ G+ AQ+ LAL +G GV+ N A Y +AA+
Sbjct: 1627 -------------EAINLYTMSAEQGNACAQFSLALMYEKGEGVEQNEARAIEIYNKAAQ 1673
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
G A + + Y + + + +A W + A+ G+ AQ G
Sbjct: 1674 QGLESAQTHLAEMYLYAQREKQDYVKATYWFTKLAEQGNADAQYHLG 1720
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 84/204 (41%), Gaps = 30/204 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+G+ +N A K A +G A GLMY L Q
Sbjct: 1360 GVSYLSGQGIEQNYGNAFYWLTKAAEQGIADAQYTLGLMY-----------LKGQGIKQD 1408
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A+ L QA+ G+ AQ L L GRG + + +A W +AA+
Sbjct: 1409 DTRAK--------DLFIQAAEQGNADAQNNLGLMYANGRGTEQDYAKAIYWLGKAAQQRN 1460
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMM 281
V A + L Y+ G G+ + A W+ AA G AQL +GLG+ GE
Sbjct: 1461 VNAQFMLGLMYASGRGVEQDYTNAAYWLGEAAQQGDPDAQLRLGFMHLNGLGVDMNGE-- 1518
Query: 282 KAVVYLELATRAGETAADHVKNVI 305
KA+ +L TRAGE +N +
Sbjct: 1519 KAIDWL---TRAGEQGNLEAQNSL 1539
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K G GV ++L +AL K A + G Y + LYR +
Sbjct: 1796 GGMYKEGWGVLQDLQEALQWIQKAATQNDQ-----TGQYYLAL--------LYRDGEGI- 1841
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRA--QYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+ A A + ++ + S+ +RA QY L GRGVD +L+EA++WY A G
Sbjct: 1842 --QSNDAYALDGLRNAAKQSVRADIRASAQYTLGWMYENGRGVDKDLEEASKWYKLAERG 1899
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
A+Y+ Y +G + L+ A +W K+AA+
Sbjct: 1900 CPAHALYSLGRMYEYGLNVDLNLGTAIEWYKKAAE 1934
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR G +G GV N +KA+D + +G+ A LMY L Q
Sbjct: 1501 LRLGFMHLNGLGVDMNGEKAIDWLTRAGEQGNLEAQNSLSLMY-----------LNGQGV 1549
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
D +A A+ G AQ++L GRGV + +A W+L+A E
Sbjct: 1550 KQDDT--------KAAYWFIAAAQQGDSDAQFRLGFMYLNGRGVGKDEDQAIVWFLKAVE 1601
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-- 282
G A N L Y+ G+ + + +A +A+ G+ AQ L ++ +GE ++
Sbjct: 1602 QGNAYAQLNLGLMYANGQSVKRDYAEAINLYTMSAEQGNACAQFSLAL-MYEKGEGVEQN 1660
Query: 283 ----AVVYLELATRAGETAADHVKNVIL 306
+Y + A + E+A H+ + L
Sbjct: 1661 EARAIEIYNKAAQQGLESAQTHLAEMYL 1688
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A+S+ G+ AA+ + ++A++L +A+ G+ AQ L L G+GVD + +A
Sbjct: 1247 ALSILGYICATGEGAAK--DEDKAIRLYTKAAEQGNASAQSNLGLMYMNGQGVDKDDTKA 1304
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
A W +AA+ G A N Y G+G+ +A +W +AA + AQ G+
Sbjct: 1305 AYWLAKAAKQGNAFAQTNLGAMYGKGQGVKQDDTKAIEWYTKAAQQENAGAQYNLGVSYL 1364
Query: 276 T 276
+
Sbjct: 1365 S 1365
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
EA W L+ A+ Y +CY +G +PLSH++A KW+ RAA+ G+
Sbjct: 1195 EALEWLLKIAKQSNSSVQYAIGVCYYYGHWVPLSHKRALKWLTRAAEQGN 1244
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA++ L + + + QY + +C + G V + + A +W RAAE G + A+
Sbjct: 1195 EALEWLLKIAKQSNSSVQYAIGVCYYYGHWVPLSHKRALKWLTRAAEQGNLDALSILGYI 1254
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
+ GEG +A + +AA+ G+ AQ GL G + + KA +L A +
Sbjct: 1255 CATGEGAAKDEDKAIRLYTKAAEQGNASAQSNLGLMYMNGQGVDKDDTKAAYWLAKAAKQ 1314
Query: 294 GETAA 298
G A
Sbjct: 1315 GNAFA 1319
>gi|398824728|ref|ZP_10583049.1| Sel1 repeat protein [Bradyrhizobium sp. YR681]
gi|398224595|gb|EJN10896.1| Sel1 repeat protein [Bradyrhizobium sp. YR681]
Length = 1133
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +EA K +A+ AG V A ++L +G GV + A R+Y +AAE G +AM+N
Sbjct: 935 ANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADTARRYYTQAAERGNAKAMHN 994
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ + G G +++ A +W ++AAD G +Q G+ G+ E + ++ + L
Sbjct: 995 LAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKWFSL 1054
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A G+ A ++ + ++L S A L + ++ A P
Sbjct: 1055 AAAQGDADASGKRDDVAKRLDPQSLAAAKLAIQTFSAEP 1093
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y++ + G+GV N EAA+WY RAA+ G V A + Y G G+ AR++
Sbjct: 921 YEIGVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADTARRYY 980
Query: 256 KRAADCGHGKAQLEHGLGLF 275
+AA+ G+ KA H L +
Sbjct: 981 TQAAERGNAKAM--HNLAVL 998
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKKEAAIS--LYRQA 163
G RF G+GV N D+A + + A G A G +Y + KK+A + Y QA
Sbjct: 924 GVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADTARRYYTQA 983
Query: 164 AVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G D + AN + A + +A+ G +Q+ L + RG GV+
Sbjct: 984 AERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQ 1043
Query: 211 NLQEAARWY-LRAAEG 225
NL E+ +W+ L AA+G
Sbjct: 1044 NLAESYKWFSLAAAQG 1059
>gi|124004620|ref|ZP_01689464.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
gi|123989743|gb|EAY29272.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
Length = 963
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ HGRGV+ N KA+ + + A +G A + G MY D K I
Sbjct: 752 YHHGRGVKVNFSKAVFWYHQAAEQGHASAAANLGWMY--ADGKGVTI------------- 796
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N A +A++ G AQ LA L G GVD N EA WY +AA G A
Sbjct: 797 ----NKSLAADYYRKAALKGQQDAQRNLAHLLRDGDGVDKNEAEAFNWYEKAASKGDASA 852
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVY 286
+ N Y G+G + +A K+ AA+ GH +AQ G LG T + +A +
Sbjct: 853 LVNLGWMYQKGKGCRQDYIKALKYYTEAANKGHSRAQYNTGVMYQLGKGTFRNLSEAFAW 912
Query: 287 LELATRAGETAA 298
+LA G A
Sbjct: 913 YKLAAEQGYANA 924
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N +A Q+ G + QY AL H GRGV N +A WY +AAE G+ A N
Sbjct: 724 VNLTKATHWFEQSGALGLISGQYNAALMYHHGRGVKVNFSKAVFWYHQAAEQGHASAAAN 783
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y+ G+G+ ++ A + ++AA G AQ
Sbjct: 784 LGWMYADGKGVTINKSLAADYYRKAALKGQQDAQ 817
>gi|407068627|ref|ZP_11099465.1| hypothetical protein VcycZ_03657 [Vibrio cyclitrophicus ZF14]
Length = 529
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G G K+ DKA K A A AG+ + G
Sbjct: 247 GRYYLYGIGTEKDTDKAFKLLSKVANENKYAAYNLAGMYF------------------NG 288
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ Q + +++ AS + + + Y +A ++G G D NL +A +WYL+AAE G
Sbjct: 289 NGVKQ--DYQKSFDWYSIASKSDNAASDYFIAQHYYKGLGRDKNLTQAYKWYLQAAEKGD 346
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 283
V A + S GEG+P S R+A KW ++AA+ G AQ G+ G TE + +A
Sbjct: 347 VDAQFRLGWMLSDGEGVPASSRKAFKWYQKAAEQGSVSAQNNLGVMYDQGRGTEKDRYQA 406
Query: 284 VVYLELATRAGETAADHVKNVILQQ 308
+ E + R G A + V+ +
Sbjct: 407 FKWYEKSARQGNDVAQNNLGVMYEN 431
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
+ + G G KNL +A +L+ A +G A G M L D
Sbjct: 319 QHYYKGLGRDKNLTQAYKWYLQAAEKGDVDAQFRLGWM-------------------LSD 359
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
PA++ +A K +A+ G V AQ L + +GRG + + +A +WY ++A G
Sbjct: 360 GEGVPASSRKAFKWYQKAAEQGSVSAQNNLGVMYDQGRGTEKDRYQAFKWYEKSARQGND 419
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A N + Y G G+ S++ A W ++A H +AQ
Sbjct: 420 VAQNNLGVMYENGTGVRKSNQLAAFWYAKSAQQNHKEAQ 458
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
Y+ + + + + L G GV + +A WY ++A+ G + N + Y G+G
Sbjct: 160 YEQCVDSYTYCSFYMGLAFDNGHGVPQDYNKAIHWYSKSAKDGNRDSARNLAWLYENGQG 219
Query: 244 LPLSHRQARKWMKRAADCG 262
+ A WM +AA G
Sbjct: 220 TNIDKESAFYWMSKAASSG 238
>gi|213963117|ref|ZP_03391375.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
sputigena Capno]
gi|213954201|gb|EEB65525.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
sputigena Capno]
Length = 810
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA ++ G+ + +G+GV ++ KA++ F K AA+G+ A+ Y
Sbjct: 213 EAQAMI--GESYLNGKGVEQSESKAIEWFEKAAAKGNATALYHLANFY-----------F 259
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y + ++G ++A+ QA+ G+V AQ QLA+CL+ G G + ++A W
Sbjct: 260 YGNSPLIGK------FPKKALDYYTQAANKGNVDAQRQLAVCLYNGIGGAASQRDAFNWI 313
Query: 220 LRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
L+A N ++CY+ G G S QA + ++AAD G AQ G L E
Sbjct: 314 LKAVNANPSPITENNLAVCYATGNGTRQSVAQAVELFRKAADAGDVTAQYNLGTLLLEEP 373
Query: 279 --EMMKAVVYLELA 290
++ KA YLE A
Sbjct: 374 QQDVKKAFEYLEKA 387
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+ +VK L + + G V+AQ +LA +G+GV + Q+AA W + AE G +A Y +
Sbjct: 20 DSSVKKLMKLAEKGDVKAQSELAEAYLKGKGVKRSFQDAALWLEKVAETGDAQAQYQLAH 79
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ G+G+P S + +W+ +AA+ G+ KA+ E L
Sbjct: 80 LHLDGKGMPKSEEKGAEWLAKAAENGNQKAEQELAL 115
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV +A+ + QY+L C + G G++ + ++AA +Y RAA GY A + C
Sbjct: 711 QAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRLGNC 770
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKA 266
Y GEG+ S +A W +A D G +A
Sbjct: 771 YYHGEGIQQSDARAIDWFDQACDSGEKQA 799
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ 185
+++LKG +G + DA L ++ + A + Y+ A + D P + E+ + L +
Sbjct: 43 EAYLKG--KGVKRSFQDAALWLEKVAETGDAQAQYQLAHLHLDGKGMPKSEEKGAEWLAK 100
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G+ +A+ +LALC GRGV + ++ W + A+ + + + Y G+G+
Sbjct: 101 AAENGNQKAEQELALCYRDGRGVAQSTEKYYAWIEKNADNEKAETLLDLAKAYYAGDGVT 160
Query: 246 LSHRQARKWMKRAADCGHGKAQL 268
+A+ W ++AA G A
Sbjct: 161 KDVNKAKFWAEKAAKKGSKDADF 183
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 29/137 (21%)
Query: 156 AISLYRQAAVLGDPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
A+ L+R+AA GD AQ + ++A + L +A+ H+ A +L
Sbjct: 346 AVELFRKAADAGDVTAQYNLGTLLLEEPQQDVKKAFEYLEKAAAQNHLLALKKLGDLNFT 405
Query: 205 GRGVDFNLQEAARWYLRAAE------------------GGYVRAMYNTSLCYSFGEGLPL 246
G+ + + A +Y +AA+ Y ++ S CY+ G+G+
Sbjct: 406 GKYTNQSYARAFEYYNKAAKLTPTPENQMLDYFYQGQADAYADVLFTLSQCYADGKGVKK 465
Query: 247 SHRQARKWMKRAADCGH 263
S R+A KW +AAD H
Sbjct: 466 SPREAAKWAMKAADLSH 482
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
+A LL K + G GV K+++KA K A +GS A D L W +
Sbjct: 141 EKAETLLDLAKAYYAGDGVTKDVNKAKFWAEKAAKKGSKDA--DFLLATWVYE------- 191
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
P+N + ++ L Q + G AQ + G+GV+ + +A W
Sbjct: 192 ------------TNPSNPD-GIQRLMQVAEKGDAEAQAMIGESYLNGKGVEQSESKAIEW 238
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK---WMKRAADCGHGKAQLEHGLGLF 275
+ +AA G A+Y+ + Y +G PL + +K + +AA+ G+ AQ + + L+
Sbjct: 239 FEKAAAKGNATALYHLANFYFYGNS-PLIGKFPKKALDYYTQAANKGNVDAQRQLAVCLY 297
Query: 276 T 276
Sbjct: 298 N 298
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A Y +AA Y Y CY G GL S+ +A + KRAA G+ AQ
Sbjct: 708 DFGQAVTQYQKAAHREYAEGQYKLGNCYYNGSGLERSNEKAADYYKRAARQGYAPAQFRL 767
Query: 271 GLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G + GE + +A+ + + A +GE A
Sbjct: 768 G-NCYYHGEGIQQSDARAIDWFDQACDSGEKQA 799
>gi|85713621|ref|ZP_01044611.1| sel1-like repeat protein [Nitrobacter sp. Nb-311A]
gi|85699525|gb|EAQ37392.1| sel1-like repeat protein [Nitrobacter sp. Nb-311A]
Length = 653
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAAVL 166
+G GV K++D+A ++ L+ AAR + A ++ D +EAA+ Y +AA
Sbjct: 253 NGHGVAKDIDRA-ETALRKAARRDYFPAIQALAEFYSHGAGFAPDLREAAV-WYEKAAER 310
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
D AQ N +A + +A+ GH A + +A+ G GV+ N++
Sbjct: 311 DDVQAQFFMGRFYATGTGVGPNIRQAARWFERAARNGHATAAFNIAVFYLNGSGVERNVE 370
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
A W+ RA+EGG A YS G G+P H++A +W+ RAA G A+ + L
Sbjct: 371 SAIEWFERASEGGIRAAQLQLGRLYSAGNGIPRDHKRAEEWLSRAAVGGDPDAKTAYALF 430
Query: 274 LF 275
L
Sbjct: 431 LL 432
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAA-- 164
F HG V +N+D A A RG A G MY E + A + Y AA
Sbjct: 107 FPHGTSVERNVDAAFHWISVAAERGKAEAQTVLGNMYSEGLGCEKNLQIAFAWYGVAAEQ 166
Query: 165 -------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
LGD Q P + E+A +A+ HVRAQ LA +G G+ NL
Sbjct: 167 NCAAAEFALGDIYFQGKGVPIDFEQAAAWYRKAAEQDHVRAQVALAFMNLKGTGMPENLA 226
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
EAAR + AA V A+YN L G G+ +A +++AA
Sbjct: 227 EAARLFQSAAMHDDVIALYNIGLLRLNGHGVAKDIDRAETALRKAA 272
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---SLYRQ 162
R G + G G+ +++ A + + A RG+ A GL++ +K +RQ
Sbjct: 30 RIGMLYAKGEGIDRSVPDAAIWYERAARRGNVEAQFHLGLIFLRGEKPLLGPHRHETWRQ 89
Query: 163 AAV--LGDPAAQ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
++ LGD A+ N + A + A+ G AQ L G G
Sbjct: 90 SSAVRLGDRASNIHQLVFPHGTSVERNVDAAFHWISVAAERGKAEAQTVLGNMYSEGLGC 149
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ NLQ A WY AAE A + Y G+G+P+ QA W ++AA+ H +AQ+
Sbjct: 150 EKNLQIAFAWYGVAAEQNCAAAEFALGDIYFQGKGVPIDFEQAAAWYRKAAEQDHVRAQV 209
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 154 EAAISLYRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
EAA+ + +AA G +P ++A+ A L +A+ AGH AQ+QLA+
Sbjct: 478 EAAVGWFARAASAGYVDAQYTLALLHLEPKNGLSDAKAAASWLTKAAHAGHAGAQFQLAV 537
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G G+ ++++ A+WY AA G+ A +N ++ G+G +A +W +RAA
Sbjct: 538 LYCTGAGLARDVEQGAQWYEAAARQGHKVAQFNLAVMLGKGQGCEPDPGKAVEWFERAAQ 597
Query: 261 CGHGKAQLEHGLGLFT 276
+AQ+ G L +
Sbjct: 598 QDMAEAQVALGDALMS 613
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ E+ + A+ GH AQ+ LA+ L +G+G + + +A W+ RAA+ A
Sbjct: 548 DVEQGAQWYEAAARQGHKVAQFNLAVMLGKGQGCEPDPGKAVEWFERAAQQDMAEAQVAL 607
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G G+ A +W RAA H AQ
Sbjct: 608 GDALMSGSGVAKDEGAAVQWYLRAASQNHEGAQ 640
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y++ + +G G+D ++ +AA WY RAA G V A ++ L + GE L + W
Sbjct: 29 YRIGMLYAKGEGIDRSVPDAAIWYERAARRGNVEAQFHLGLIFLRGEKPLLGPHRHETWR 88
Query: 256 KRAA 259
+ +A
Sbjct: 89 QSSA 92
>gi|189502471|ref|YP_001958188.1| hypothetical protein Aasi_1118 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497912|gb|ACE06459.1| hypothetical protein Aasi_1118 [Candidatus Amoebophilus asiaticus
5a2]
Length = 329
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 52/270 (19%)
Query: 93 DALRPLREAMVLLRW--GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--- 147
D++ +E W GK +++G G+ K+ KA+ + + + T A G +Y
Sbjct: 21 DSMSKDKEVTGSAEWHLGKLYENGWGITKDCKKAIAWYQSASYQNHTEAQCRLGRIYENG 80
Query: 148 ------WEMDKKEAAISLYRQAAVLGDPAAQPA--------------------------- 174
E D++EA Y +AA G A+ A
Sbjct: 81 IINGMITEKDEQEAR-DWYEKAAERGSSVARNALCSMYEKAVRVRQEDMEAQYNLGVMYY 139
Query: 175 -------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N +EA + +A+ G+ +AQ+ LA G GV+ + +A +W +AA+ GY
Sbjct: 140 KCWGVDKNYQEAKEWYEKAAEQGYAKAQHTLAAMYINGEGVEKDHVKAFKWCQKAAKQGY 199
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 282
RA +N + Y GEG+ H +A KW ++AA G+ KAQ ++ ++ GE + K
Sbjct: 200 ARAQHNLAAMYINGEGVEKDHAKAFKWCQKAAKQGYAKAQ-DNLAAMYINGEGVEKDHAK 258
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSAT 312
A + + A G +A + + Q+++ T
Sbjct: 259 AFKWCQKAAEQGNVSAQYNRAAAKQKINKT 288
>gi|284006465|emb|CBA71725.1| conserved Sel1 repeat protein [Arsenophonus nasoniae]
Length = 487
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K+W + ++A G +++G GV +N +KA + + K A G A+ + +Y
Sbjct: 160 AKNWYEKAALQQDAYAQFVLGYLYQNGFGVSQNYNKAKEWYEKSADLGDLGALNNLAQIY 219
Query: 148 ---WEMDKKEA-AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ + K A AI LYR+AA GD AQ Y +
Sbjct: 220 EKGYGVKKNPAYAIELYRRAAYSGDAIAQ-----------------------YNMGFIYD 256
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G ++ N +A WY RAAE G++ A Y+ + Y G G+ + AR+W + A+ G+
Sbjct: 257 DGEYLEKNNYQAFYWYKRAAEQGHIDAQYHLAEFYQHGYGVEQNAILARQWYEVLANAGY 316
Query: 264 GKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
A + E G+G+ + +++KA ++ +GE A +
Sbjct: 317 ADASMKVAYYYEKGIGI--KKDLIKAAELYQIMANSGEAEAQY 357
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+ +++++ KA F K G++ A G++ +AAI+ ++ A GDP AQ
Sbjct: 83 KDIQEDIGKASFWFEKAIKEGNSDAFYYMGVINQRKKDYKAAITWLQRGANKGDPYAQSG 142
Query: 175 -------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
+ ++A +A++ AQ+ L G GV N +A WY +
Sbjct: 143 LGYMYTVGLGVDKDYKQAKNWYEKAALQQDAYAQFVLGYLYQNGFGVSQNYNKAKEWYEK 202
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 281
+A+ G + A+ N + Y G G+ + A + +RAA G AQ G ++ +GE +
Sbjct: 203 SADLGDLGALNNLAQIYEKGYGVKKNPAYAIELYRRAAYSGDAIAQYNMGF-IYDDGEYL 261
Query: 282 KAVVY 286
+ Y
Sbjct: 262 EKNNY 266
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
K W + L + L + ++ G GV+KN A++ + + A G +A + G +Y
Sbjct: 196 AKEWYEKSADLGDLGALNNLAQIYEKGYGVKKNPAYAIELYRRAAYSGDAIAQYNMGFIY 255
Query: 148 WEMDKKE----AAISLYRQAAVLGDPAAQPANAE--------EAVKLL----YQA-SIAG 190
+ + E A Y++AA G AQ AE E +L Y+ + AG
Sbjct: 256 DDGEYLEKNNYQAFYWYKRAAEQGHIDAQYHLAEFYQHGYGVEQNAILARQWYEVLANAG 315
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ A ++A +G G+ +L +AA Y A G A Y + Y G+G+ +
Sbjct: 316 YADASMKVAYYYEKGIGIKKDLIKAAELYQIMANSGEAEAQYRLAQLYLVGQGINKQPKN 375
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLF 275
A M++AA Q ++ LGLF
Sbjct: 376 AFSLMQKAA---QKIPQAKNQLGLF 397
>gi|421654930|ref|ZP_16095255.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
gi|408509684|gb|EKK11354.1| Sel1 repeat protein [Acinetobacter baumannii Naval-72]
Length = 301
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKLDQKKALELFEKSAQLGSSNAMLQLGLIYRNGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAA--------------QPANAEEAVKLLYQASIAGHV 192
++ KK+ A+ + Q A G+P+A NA+ A K Q++ G +
Sbjct: 105 DLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYKGLGITEDNAK-AFKYFSQSAELGLL 163
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
++Q +A L+ G GV + ++A W L+AA G V + N L Y G+G+ A+
Sbjct: 164 QSQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDVESQNNIGLAYENGDGVAKDPVLAK 223
Query: 253 KWMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVYLE 288
KW ++AA+ G Q L F E K++ Y E
Sbjct: 224 KWFEKAANNGSVLGQYNLALKYFDGNGVEQNFSKSIEYAE 263
>gi|417547764|ref|ZP_12198846.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
gi|417563991|ref|ZP_12214865.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|395555747|gb|EJG21748.1| Sel1 repeat protein [Acinetobacter baumannii OIFC143]
gi|400389513|gb|EJP52584.1| Sel1 repeat protein [Acinetobacter baumannii Naval-18]
Length = 301
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---W 148
NDA EA+ +L + G G + + KAL+ F K A GS+ AM+ GL+Y
Sbjct: 52 NDA-----EAIFVL--ASMYATGEGEKLDQKKALELFEKSAQLGSSNAMLQLGLIYRNGN 104
Query: 149 EMDKKE--AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVR 193
++ KK+ A+ + Q A G+P+A + +A K Q++ G ++
Sbjct: 105 DLIKKDDLKALKWFEQGAKKGNPSAIHNLGVSYYKGLGITEDKAKAFKYFSQSAELGLLQ 164
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
+Q +A L+ G GV + ++A W L+AA G V + N L Y G+G+ A+K
Sbjct: 165 SQVIVAGLLYNGEGVTKDHKKAFEWALKAANQGDVESQNNIGLAYENGDGVAKDPVLAKK 224
Query: 254 WMKRAADCGHGKAQLEHGLGLF----TEGEMMKAVVYLE 288
W ++AA+ G Q L F E K++ Y E
Sbjct: 225 WFEKAANNGSVLGQYNLALKYFDGNGVEQNFSKSIEYAE 263
>gi|309751055|gb|ADO81039.1| Putative TPR repeat protein [Haemophilus influenzae R2866]
Length = 219
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK +A+ GH +AQ+ L + +G+GV + +A +WY +AAE GY A N
Sbjct: 83 EAVKWYRKAAEQGHAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANLGSA 142
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
YS G G+ + +A KW K+AA+ G Q + GL
Sbjct: 143 YSAGRGVRQDYIEAVKWFKKAAENGSADGQFKLGL 177
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A + ++ + A KL + G Q+ L + +G+GV + EA +WY +AAE G
Sbjct: 36 GSTAYEQSDYQTAFKLWLPMAEQGDANVQFNLGVMYAKGQGVKQDDFEAVKWYRKAAEQG 95
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ +A +N + Y+ G+G+ +A KW ++AA+ G+ AQ G
Sbjct: 96 HAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANLG 140
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A V G + G+GV+++ +A+ + K A +G A + G+MY
Sbjct: 60 DANVQFNLGVMYAKGQGVKQDDFEAVKWYRKAAEQGHAKAQFNLGVMY------------ 107
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
G Q + +AVK +A+ G+ AQ L GRGV + EA +W+
Sbjct: 108 -----AKGQGVKQ--DDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGVRQDYIEAVKWF 160
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+AAE G + L Y G+ + A++W +A D G
Sbjct: 161 KKAAENGSADGQFKLGLVYLIGQSIQKDRTLAKEWFGKACDNGE 204
>gi|92116632|ref|YP_576361.1| Sel1-like protein [Nitrobacter hamburgensis X14]
gi|91799526|gb|ABE61901.1| Sel1-like protein [Nitrobacter hamburgensis X14]
Length = 679
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW------EMDKKEAAISLYRQAAVL 166
+G GV K++D+A ++ L+ AAR V A ++ E D +EAA+ Y +AA
Sbjct: 279 NGHGVAKDIDRA-ETALRKAARKDYFPAVQALADFYSHGAGSEPDLREAAV-WYEKAAER 336
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
D AQ N +A K +A+ GH A + +A+ G GV+ N++
Sbjct: 337 DDVQAQFFMGRFYATGTGVGPNIRQAAKWFERAAGNGHATAAFNIAIFYLNGSGVERNVE 396
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
A W+ RA+E G A YS G G+P H++A +W+ +AA G A+ +
Sbjct: 397 AAIEWFERASESGIRAAQLQLGRLYSAGNGVPRDHKRAGEWLSKAASGGEPDAKTAYAFF 456
Query: 274 LF 275
L
Sbjct: 457 LL 458
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 154 EAAISLYRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
EAA+S + +AA G DP ++A+ AV + +A+ AGH AQ+QLA+
Sbjct: 504 EAAVSWFSRAAGAGHVEGQYTLALLYLDPNNAVSDAKAAVSWMTRAAHAGHAGAQFQLAV 563
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G GV ++ + A WY AA G+ A +N ++ G+G +A +W ++AA+
Sbjct: 564 IYCTGAGVAQDVAQGANWYEAAARQGHKVAQFNLAVMLGKGQGCEADPGKAVEWFEKAAE 623
Query: 261 CGHGKAQLEHGLGLFT 276
+AQ+ G L +
Sbjct: 624 QDMAEAQVALGDALMS 639
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 79/203 (38%), Gaps = 25/203 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA------ 164
F HG V +N+D A A RG A G MY E E
Sbjct: 133 FPHGTSVERNVDAAFGWIAVAAERGKAEAQTVLGNMYCEGVGCEKDFRAALAWYRAAADQ 192
Query: 165 -------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
LGD Q P + E+A +A+ HVRAQ LA +G G+ +
Sbjct: 193 NCAAAEFALGDVHYQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAFMNLKGTGLPEDPA 252
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------ 267
EAAR + AA A+YN L G G+ +A +++AA + A
Sbjct: 253 EAARLFQGAARQDDTIALYNIGLLRLNGHGVAKDIDRAETALRKAARKDYFPAVQALADF 312
Query: 268 LEHGLGLFTEGEMMKAVVYLELA 290
HG G +E ++ +A V+ E A
Sbjct: 313 YSHGAG--SEPDLREAAVWYEKA 333
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA+KL AS AG A Y++ + RG GV ++ +A WY AA G V AM+ L
Sbjct: 37 EAIKLWKLASEAGEAEAGYRIGMLYVRGEGVVRSVPDAVVWYEWAARLGNVEAMFQLGLI 96
Query: 238 YSFGEGLPLSHRQARKWMKRAA 259
+ G+ L + W + +A
Sbjct: 97 FLHGDKPLLGPCRHETWRQSSA 118
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G GV +N++ A++ F + + G A + G +Y D K A L + AA
Sbjct: 385 YLNGSGVERNVEAAIEWFERASESGIRAAQLQLGRLYSAGNGVPRDHKRAGEWLSK-AAS 443
Query: 166 LGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFN 211
G+P A+ A A E+ LL +A+ AGH A +QL + L GR G +
Sbjct: 444 GGEPDAKTAYAFFLLHHDDSTERLEQVRSLLSEAAEAGHAPAAFQLGV-LEMGRFGGSVD 502
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE-- 269
++ A W+ RAA G+V Y +L Y + A WM RAA GH AQ +
Sbjct: 503 VEAAVSWFSRAAGAGHVEGQYTLALLYLDPNNAVSDAKAAVSWMTRAAHAGHAGAQFQLA 562
Query: 270 --HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 306
+ G ++ + + E A R G A V+L
Sbjct: 563 VIYCTGAGVAQDVAQGANWYEAAARQGHKVAQFNLAVML 601
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
+Y A + AQ AN EA A+ GH AQ+ LA+ L +G+G + + +A W
Sbjct: 564 IYCTGAGVAQDVAQGANWYEA------AARQGHKVAQFNLAVMLGKGQGCEADPGKAVEW 617
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ +AAE A G G+ A W ++AA H
Sbjct: 618 FEKAAEQDMAEAQVALGDALMSGSGVAQDRDAAVHWYQQAARQNH 662
>gi|323455583|gb|EGB11451.1| hypothetical protein AURANDRAFT_21269, partial [Aureococcus
anophagefferens]
Length = 220
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 135 GSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGDPAAQ---------PANAEEAV 180
G AM G MY ++DKK+ LYR AA G AQ EEA
Sbjct: 1 GDVDAMPFLGEMYGNGLGVKLDKKKKE-RLYRMAADRGSAFAQYNLGTFLHFEEKFEEAF 59
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
+ A+ GH ++ L C GRG ++AA+ Y RA E G V AM N Y
Sbjct: 60 RYYVLAANQGHTEGEHGLGYCYRLGRGT----EKAAKIYRRAVELGDVEAMRNLGFMYET 115
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
G G+ L ++A + + AAD G AQ G L E + +A+ Y LA G A +H
Sbjct: 116 GSGVKLDKKKAERLYRMAADRGDATAQFNLGAFLHAEAKFEEAIRYFVLAADQGLAAGEH 175
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++ GRG +KA + + G AM + G MY ++DKK+A LYR AA
Sbjct: 81 YRLGRGT----EKAAKIYRRAVELGDVEAMRNLGFMYETGSGVKLDKKKAE-RLYRMAAD 135
Query: 166 LGDPAAQ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
GD AQ A EEA++ A+ G ++ L C GRG + +L +A
Sbjct: 136 RGDATAQFNLGAFLHAEAKFEEAIRYFVLAADQGLAAGEHGLGYCYRLGRGTEVDLGKAR 195
Query: 217 RWYLRAAEGGYVRAMYNTS 235
WY RAA GY +A N +
Sbjct: 196 YWYARAAAKGYEKATRNLA 214
>gi|78777396|ref|YP_393711.1| Sel1 repeat-containing protein [Sulfurimonas denitrificans DSM
1251]
gi|78497936|gb|ABB44476.1| Sel1-like repeat [Sulfurimonas denitrificans DSM 1251]
Length = 303
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 80 QLRAASLVCKSWNDALRPLRE--AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
QL A K+++ LR ++ + + G + +G GV KN +KA + + + + +G+
Sbjct: 17 QLFADINSTKTFDKYLREAKDGNSSAMFNVGLSYFNGVGVEKNHNKAFEWYNRASDKGNL 76
Query: 138 LAMVDAGLMYWEMDKKEAAISL----YRQAAVLGDPAAQ------------PANAEEAVK 181
A+ + G MY D SL Y AA G AQ N ++A
Sbjct: 77 EALNNLGTMYDNGDATLQNSSLAQKYYEMAANAGLATAQLNLGLFFEKNPTSENMKKAAS 136
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
+A++ G+ AQ LA + G G+ +NL+ A W+ AA A YN S+ Y
Sbjct: 137 WYEKAALQGNSIAQNNLAKLYYFGNGIGYNLERAFYWFQEAAWQDDPIAQYNLSMMYYKA 196
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
E P + W++R+A G AQ + G +TEG ++K
Sbjct: 197 EHTPYDASKTLFWLERSAKNGSQHAQTKLG-DFYTEGLIVK 236
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ-- 172
+N+ KA + K A +G+++A + +Y+ + E A +++AA DP AQ
Sbjct: 129 ENMKKAASWYEKAALQGNSIAQNNLAKLYYFGNGIGYNLERAFYWFQEAAWQDDPIAQYN 188
Query: 173 -----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
P +A + + L +++ G AQ +L G V NL+ A WY+R
Sbjct: 189 LSMMYYKAEHTPYDASKTLFWLERSAKNGSQHAQTKLGDFYTEGLIVKKNLEIAFEWYMR 248
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
AA Y +A+Y + Y +G G+ + +A++W+++A++ G+ A L
Sbjct: 249 AALKNYQKALYQVGVFYFYGHGVNKNSIKAKEWLEKASESGYEDATL 295
>gi|75674735|ref|YP_317156.1| Sel1 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
gi|74419605|gb|ABA03804.1| sel1-like repeat protein [Nitrobacter winogradskyi Nb-255]
Length = 680
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM------DKKEAAISLYRQAAVLG 167
G GV K++DKA ++ L+ AAR + A ++ D +EAA+ Y +AA
Sbjct: 281 GHGVAKDIDKA-ETALRKAARKDYFPAIQALAEFYSHGGGFAPDLREAAV-WYEKAAERD 338
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
D AQ N +A K +A+ GH A + +A+ G GV+ ++
Sbjct: 339 DVQAQFFMGRFYAMGTGVGPNIRQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDR 398
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A W+ RA+EGG A YS G G+P + AR+W+ +AA+ G AQ + L L
Sbjct: 399 AIEWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFL 458
Query: 275 FTE 277
+
Sbjct: 459 LRQ 461
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 25/238 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKE 154
EA +L G + G G KNL AL + A + A G ++++ +D ++
Sbjct: 161 EAQTVL--GNMYSEGLGCEKNLQIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQ 218
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
AA+ YR+AA AQ P N EA +L A++ + A Y + L
Sbjct: 219 AAV-WYRKAAEQDHVRAQVALAFMNLKGTGMPENPAEAARLFQGAAMHDDIIALYNIGLL 277
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
+G GV ++ +A +AA Y A+ + YS G G R+A W ++AA+
Sbjct: 278 RLKGHGVAKDIDKAETALRKAARKDYFPAIQALAEFYSHGGGFAPDLREAAVWYEKAAER 337
Query: 262 GHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+AQ G +G + +A + E A R G A + S RD
Sbjct: 338 DDVQAQFFMGRFYAMGTGVGPNIRQAAKWFERAARNGHATAAFNIAIFYLNGSGVERD 395
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 59/264 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----AAVL 166
+ +G GV +++D+A++ F + + G A + G +Y + L R+ AA
Sbjct: 386 YLNGSGVERDVDRAIEWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANG 445
Query: 167 GDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNL 212
GDP AQ A A E+A LL +A+ A H A +QL + LH G+ G + ++
Sbjct: 446 GDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAEADHAPAAFQLGV-LHMGKFGGETDI 504
Query: 213 QEAARWYLRAAEGGYVRAMYNTSL------------------------------------ 236
A W+ RAA G+V A Y +L
Sbjct: 505 AAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDAKAAASWMTKAAHAGHAGAQFQLAV 564
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
Y G GL Q +W + AA GH AQ G G E ++ KAV + E A R
Sbjct: 565 LYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAAR 624
Query: 293 AGETAADHVKNVILQQLSATSRDR 316
A L S ++D+
Sbjct: 625 QDVAEAQIALGDALMSGSGVTKDQ 648
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI---SLYRQ 162
R G+ + G GV +++ A + + A G A GL++ + +K +RQ
Sbjct: 57 RIGRLYVKGEGVVRSVPDAAIWYERAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQ 116
Query: 163 AAV--LGDPAAQ------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
++ LGD A+ N + A + A+ G AQ L G G
Sbjct: 117 SSAIRLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKAEAQTVLGNMYSEGLGC 176
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ NLQ A WY AAE A + + G+G+P+ QA W ++AA+ H +AQ+
Sbjct: 177 EKNLQIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQV 236
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP + ++A+ A + +A+ AGH AQ+QLA+ G G+ ++ + RWY AA+ G+
Sbjct: 532 DPGSGMSDAKAAASWMTKAAHAGHAGAQFQLAVLYCTGAGLAQDVAQGVRWYEAAAQQGH 591
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----A 283
A +N ++ G+G + +A +W ++AA +AQ+ G L + + K A
Sbjct: 592 RIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAARQDVAEAQIALGDALMSGSGVTKDQDAA 651
Query: 284 VVYLELATRAGETAADHVKNVI 305
V + A A H N I
Sbjct: 652 VQWYRRAAGHNHEGARHRLNAI 673
>gi|421538567|ref|ZP_15984742.1| sel1 repeat protein [Neisseria meningitidis 93003]
gi|402316237|gb|EJU51786.1| sel1 repeat protein [Neisseria meningitidis 93003]
Length = 272
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEAAISLY-RQAAVL 166
+ +G+GVR++ +A+ F K A +G+ A ++ G+MY++ + + +A L+ R+AA
Sbjct: 89 YANGQGVRQDDAQAVQWFRKAAEQGNAQAQLNLGVMYYKGRGVRQDDAQAELWTRKAAEQ 148
Query: 167 GDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ + ++V+ +A+ G AQY L + +G GV +
Sbjct: 149 GGANAQNNLGAMYAQGLGARQDYAQSVQWYRKAAEQGDAEAQYNLGVMYAQGLGVRQDYT 208
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+A +WY +AAE G A YN L Y GEG+ A++W+ +A G+ K +H
Sbjct: 209 QAVQWYRKAAEQGDAEAQYNLGLMYYKGEGVRQDLALAQEWLGKACQNGYQKGCDKH 265
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
A L G + +G+GVR++ +A F K A +G+ A + GLMY D +A
Sbjct: 43 AQAQLNLGWMYANGQGVRQDDAQATQWFRKSAEQGNAKAQFNLGLMYANGQGVRQDDAQA 102
Query: 156 AISLYRQAAVLGDPAAQ-----------PANAEEAVKLLY--QASIAGHVRAQYQLALCL 202
+ +R+AA G+ AQ ++A L+ +A+ G AQ L
Sbjct: 103 -VQWFRKAAEQGNAQAQLNLGVMYYKGRGVRQDDAQAELWTRKAAEQGGANAQNNLGAMY 161
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G G + ++ +WY +AAE G A YN + Y+ G G+ + QA +W ++AA+ G
Sbjct: 162 AQGLGARQDYAQSVQWYRKAAEQGDAEAQYNLGVMYAQGLGVRQDYTQAVQWYRKAAEQG 221
Query: 263 HGKAQLEHGLGLFTEGEMMK 282
+AQ GL ++ +GE ++
Sbjct: 222 DAEAQYNLGL-MYYKGEGVR 240
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+ +AQ L G+GV + +A +W+ ++AE G +A +N L Y+ G+G+
Sbjct: 36 QAAEQGNAQAQLNLGWMYANGQGVRQDDAQATQWFRKSAEQGNAKAQFNLGLMYANGQGV 95
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR-AGETAADHVKN 303
QA +W ++AA+ G+ +AQL G+ + + + EL TR A E + +N
Sbjct: 96 RQDDAQAVQWFRKAAEQGNAQAQLNLGVMYYKGRGVRQDDAQAELWTRKAAEQGGANAQN 155
Query: 304 VI 305
+
Sbjct: 156 NL 157
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + +++ G+ +AQ+ L L G+GV + +A +W+ +AAE G +A N +
Sbjct: 65 QATQWFRKSAEQGNAKAQFNLGLMYANGQGVRQDDAQAVQWFRKAAEQGNAQAQLNLGVM 124
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y G G+ QA W ++AA+ G AQ G GL + ++V + A
Sbjct: 125 YYKGRGVRQDDAQAELWTRKAAEQGGANAQNNLGAMYAQGLGARQDYAQSVQWYRKAAEQ 184
Query: 294 GETAADHVKNVILQQLSATSRDRAMLV 320
G+ A + V+ Q +D V
Sbjct: 185 GDAEAQYNLGVMYAQGLGVRQDYTQAV 211
>gi|339483599|ref|YP_004695385.1| Sel1 domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338805744|gb|AEJ01986.1| Sel1 domain protein repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 224
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV---------DFNLQEAARWYLRAAEGG 226
AEE K L + + AG+ AQ L + + G V D + + AA W+ RAAE G
Sbjct: 77 AEEKFKALMEDAKAGNPAAQNGLGVMYYTGEAVSKSPSGQLLDNDPEVAAGWFFRAAEQG 136
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
Y A +N L Y+ GEG+P QA + K+AA+ GH AQ G FT
Sbjct: 137 YADAQFNLGLMYANGEGIPQDMAQAAELFKKAAEQGHVDAQNNLGAMYFT 186
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 28/219 (12%)
Query: 47 FSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLR 106
C KS + + +SLP N++ +P L N+ L+E ++
Sbjct: 17 IGCGEESKSDK-SEISSLP-KPTNEVTKLGEIPSFIGEGLT----NEEKAELKEQIL--- 67
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
G G K ++ + ++ A G+ A G+MY Y AV
Sbjct: 68 -----PAGVGDVKTAEEKFKALMEDAKAGNPAAQNGLGVMY------------YTGEAVS 110
Query: 167 GDPAAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
P+ Q + E A ++A+ G+ AQ+ L L G G+ ++ +AA + +AAE
Sbjct: 111 KSPSGQLLDNDPEVAAGWFFRAAEQGYADAQFNLGLMYANGEGIPQDMAQAAELFKKAAE 170
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G+V A N Y G+G+ ++A +W ++AA G+
Sbjct: 171 QGHVDAQNNLGAMYFTGDGVARDEKKAIEWFEKAAAQGN 209
>gi|71064936|ref|YP_263663.1| hypothetical protein Psyc_0360 [Psychrobacter arcticus 273-4]
gi|71037921|gb|AAZ18229.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 305
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 18/192 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQA 163
G ++ G+GV+++ A + + K A +G + + G +Y + + SL Y++A
Sbjct: 82 GSLYRDGKGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKA 141
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G A+Q + AVK +A+ GH+ +Q+ L G+ V
Sbjct: 142 AEQGHIASQFNLGSLYQDGKGIQQDFALAVKWYQKAAEQGHIASQFNLGSLYQEGKDVQQ 201
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ AA+WY +AAE G++ + +N Y G+ + A KW ++AA+ GH +Q
Sbjct: 202 DFALAAKWYQKAAEQGHIASQFNLGSLYQEGKDVQQDFALAAKWYQKAAEQGHIASQFNL 261
Query: 271 GLGLFTEGEMMK 282
G L+ EG+ ++
Sbjct: 262 G-SLYQEGKGLR 272
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G ++ G+GV+++ A + + K A +G + + G +Y + + A+ Y++A
Sbjct: 118 GSLYRDGKGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYQDGKGIQQDFALAVKWYQKA 177
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G A+Q + A K +A+ GH+ +Q+ L G+ V
Sbjct: 178 AEQGHIASQFNLGSLYQEGKDVQQDFALAAKWYQKAAEQGHIASQFNLGSLYQEGKDVQQ 237
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ AA+WY +AAE G++ + +N Y G+GL QA++W +A D G
Sbjct: 238 DFALAAKWYQKAAEQGHIASQFNLGSLYQEGKGLRQDKNQAKEWFGKACDNG 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
LY++AA GD AQ + AVK +A+ GH+ +Q+ L G
Sbjct: 29 LYQKAAHNGDAEAQFNLGLTYKDGQDVQQDNSMAVKWYQKAAEQGHIASQFNLGSLYRDG 88
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
+GV + AA WY +AAE G++ + +N Y G+G+ A +W ++AA+ GH
Sbjct: 89 KGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKAAEQGHIA 148
Query: 266 AQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
+Q G L+ +G+ ++ AV + + A G A+ + Q+ +D A+
Sbjct: 149 SQFNLG-SLYQDGKGIQQDFALAVKWYQKAAEQGHIASQFNLGSLYQEGKDVQQDFAL 205
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
L R+ L +P+ KL +A+ G AQ+ L L G+ V + A +W
Sbjct: 6 LKRKLDSLKNPSYTAQRLNPTTKLYQKAAHNGDAEAQFNLGLTYKDGQDVQQDNSMAVKW 65
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
Y +AAE G++ + +N Y G+G+ A +W ++AA+ GH +Q G L+ +G
Sbjct: 66 YQKAAEQGHIASQFNLGSLYRDGKGVQQDFSLAAEWYQKAAEQGHIASQFNLG-SLYRDG 124
Query: 279 EMMK-----AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
+ ++ A + + A G A+ + Q +D A+ V
Sbjct: 125 KGVQQDFSLAAEWYQKAAEQGHIASQFNLGSLYQDGKGIQQDFALAV 171
>gi|384411620|ref|YP_005620985.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931994|gb|AEH62534.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 202
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A +G + G+GV ++ +KA+ + K A +G+ A G+ Y
Sbjct: 46 DAAAQFVFGFAYSQGKGVARDYEKAVFWWQKAADQGNAKAQYALGVAY------------ 93
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
G AQ + E+AV +A+ GH AQY L ++G GV ++A WY
Sbjct: 94 -----ANGMGVAQ--DYEKAVFWYQKAADQGHAAAQYDLGSAYYQGAGVPQGYEKAVFWY 146
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+AA G A YN + Y FG+G+ AR W ++AAD G KA+
Sbjct: 147 QKAANQGDADAQYNLGVAYYFGQGVVQDKGIARFWFQQAADKGEAKAK 194
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+AV +A+ G+ +AQY L + G GV + ++A WY +AA+ G+ A Y+
Sbjct: 68 EKAVFWWQKAADQGNAKAQYALGVAYANGMGVAQDYEKAVFWYQKAADQGHAAAQYDLGS 127
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
Y G G+P + +A W ++AA+ G AQ G+ +
Sbjct: 128 AYYQGAGVPQGYEKAVFWYQKAANQGDADAQYNLGVAYY 166
>gi|255066185|ref|ZP_05318040.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
gi|255049730|gb|EET45194.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
Length = 140
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 156 AISLYRQAAVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR+AA GD AQ AN + +AV+ +A+ GH +AQY L
Sbjct: 5 AVQWYRKAAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGMY 64
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+GV NL +A +WY +AAE G A YN + Y G+G+ +++ A++W +A D G
Sbjct: 65 ANGKGVLQNLVQAEQWYRKAAEQGIAEAQYNLGVMYDNGQGVRQNYKIAKEWFGKACDNG 124
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV+ +A+ G AQY L + G+GV + +A +WY +AA G+ +A YN
Sbjct: 4 QAVQWYRKAAEQGDAPAQYNLGVMYANGQGVRQDDAQAVQWYRKAAGQGHAKAQYNLGGM 63
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y+ G+G+ + QA +W ++AA+ G +AQ G+ ++ G+ ++
Sbjct: 64 YANGKGVLQNLVQAEQWYRKAAEQGIAEAQYNLGV-MYDNGQGVR 107
>gi|242280592|ref|YP_002992721.1| Sel1 domain-containing protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
gi|242123486|gb|ACS81182.1| Sel1 domain protein repeat-containing protein [Desulfovibrio
salexigens DSM 2638]
Length = 417
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEA 155
A + G F G G++++ KA F K A +GS A + +MY + D +A
Sbjct: 59 AKAMYNLGIMFSSGSGMQRDFSKAAMWFRKAADQGSVGAQYNLAMMYANGIGVKQDHAQA 118
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A LY A G AQ N E A+ +A+ G AQY L +
Sbjct: 119 A-QLYLPIAEQGLAEAQNNLAAMYENGLGVTQNLETALSWYRKAAEQGLPIAQYNLGIMY 177
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G G+D + +A WY +AAE V A N Y+ G+G+ + A W +RAA+ G
Sbjct: 178 AHGMGIDQDFNQAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVEQDYSIAAYWYRRAAEQG 237
Query: 263 HGKAQL------EHGLGL 274
AQL E+GLGL
Sbjct: 238 FAGAQLNLGRLYENGLGL 255
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV +NL+ AL + K A +G +A + G+MY G
Sbjct: 141 YENGLGVTQNLETALSWYRKAAEQGLPIAQYNLGIMY-----------------AHGMGI 183
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q N +AV +A+ +V AQ L + G+GV+ + AA WY RAAE G+ A
Sbjct: 184 DQDFN--QAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVEQDYSIAAYWYRRAAEQGFAGA 241
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
N Y G GL + QA +W +AA+ G KAQ + + ++ EG
Sbjct: 242 QLNLGRLYENGLGLAQDYAQASQWYTKAAEQGLPKAQHDLAI-MYAEG 288
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
+ + +N A+ R+A M G + +G+GV ++ A + + A +G A
Sbjct: 183 IDQDFNQAVHWYRKAAEQDNVMAQNNLGSMYNNGKGVEQDYSIAAYWYRRAAEQGFAGAQ 242
Query: 141 VDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKL 182
++ G +Y D +A+ Y +AA G P AQ P N AV
Sbjct: 243 LNLGRLYENGLGLAQDYAQAS-QWYTKAAEQGLPKAQHDLAIMYAEGLGVPQNYSHAVLW 301
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
A+ G+ +QY L L G GV + AA+WYL+AA+ G A YN + Y G+
Sbjct: 302 YLTAAEQGYALSQYNLGLMFDSGLGVKQDRTRAAQWYLKAAKQGVPEAQYNIAAMYESGQ 361
Query: 243 GLPLSHRQARKWMKRAADCG 262
+ + QA W +A+ G
Sbjct: 362 DITQDYIQAYMWFSLSAERG 381
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A Q + E A +L +A+ H +A Y L + G G+ + +AA W+ +AA+ G
Sbjct: 34 GFAAYQQGDYELASRLFLKAAEQDHAKAMYNLGIMFSSGSGMQRDFSKAAMWFRKAADQG 93
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
V A YN ++ Y+ G G+ H QA + A+ G +AQ E+GLG+
Sbjct: 94 SVGAQYNLAMMYANGIGVKQDHAQAAQLYLPIAEQGLAEAQNNLAAMYENGLGV 147
>gi|119945229|ref|YP_942909.1| TPR repeat- and Sel1 domain-containing protein [Psychromonas
ingrahamii 37]
gi|119863833|gb|ABM03310.1| Sel1 domain and tetratricopeptide repeat-containing protein
[Psychromonas ingrahamii 37]
Length = 193
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G G+ ++ AL F K A +G A V+ G MY K+ ++
Sbjct: 42 GVMYMMGNGIPQSYPLALKWFSKAAKQGLASAQVNLGSMY----KESLGVT--------- 88
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N EA +A++ GH Q LAL G GV N EA+RW+L+AA+ G+
Sbjct: 89 ------QNNAEAFIWYQKAALQGHAAGQNNLALMYMLGLGVTPNPIEASRWWLKAAQQGH 142
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V A + Y G G+P + +A KW ++AA G A+
Sbjct: 143 VSAQLSLGTLYELGLGVPKNSDEAIKWWRKAAMQGDSSAK 182
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + A+K +A+ G AQ L GV N EA WY +AA G+
Sbjct: 52 PQSYPLALKWFSKAAKQGLASAQVNLGSMYKESLGVTQNNAEAFIWYQKAALQGHAAGQN 111
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLE 288
N +L Y G G+ + +A +W +AA GH AQL G LGL +A+ +
Sbjct: 112 NLALMYMLGLGVTPNPIEASRWWLKAAQQGHVSAQLSLGTLYELGLGVPKNSDEAIKWWR 171
Query: 289 LATRAGETAA 298
A G+++A
Sbjct: 172 KAAMQGDSSA 181
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
A + E VK+ ++ G +Q+ L + G G+ + A +W+ +AA+ G A N
Sbjct: 17 AESGEQVKIDTLSAEYGDAASQHNLGVMYMMGNGIPQSYPLALKWFSKAAKQGLASAQVN 76
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGL 274
Y G+ ++ +A W ++AA GH Q L + LGL
Sbjct: 77 LGSMYKESLGVTQNNAEAFIWYQKAALQGHAAGQNNLALMYMLGL 121
>gi|88857844|ref|ZP_01132486.1| hypothetical protein PTD2_10679 [Pseudoalteromonas tunicata D2]
gi|88819461|gb|EAR29274.1| hypothetical protein PTD2_10679 [Pseudoalteromonas tunicata D2]
Length = 432
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N ++++ L A+ H A + LA+ GRGV+ + +A WY +AAE ++ A
Sbjct: 90 NVDQSISYLTYAAELKHPEAMFNLAVAFELGRGVNKSASDAVGWYQKAAEADFLPAQRKL 149
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV----VYLELA 290
+L Y G+G P+ +Q+ W K+AA+ G AQL+ G L + + K + ++E A
Sbjct: 150 ALMYEKGKGTPVDAKQSYFWYKKAAEAGQSYAQLKLGAILLQDKVVPKDIEAGLSWIEKA 209
Query: 291 TRAGETAA 298
ET A
Sbjct: 210 ALQNETEA 217
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDK 152
L+ + F+ GRGV K+ A+ + K A A LMY + +D
Sbjct: 104 LKHPEAMFNLAVAFELGRGVNKSASDAVGWYQKAAEADFLPAQRKLALMYEKGKGTPVDA 163
Query: 153 KEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA 199
K++ Y++AA G AQ P + E + + +A++ AQ+ LA
Sbjct: 164 KQSYF-WYKKAAEAGQSYAQLKLGAILLQDKVVPKDIEAGLSWIEKAALQNETEAQFALA 222
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
L R +D +L WY +AAE G AM+N + Y GE +PL ++ ++ K++
Sbjct: 223 TLLW-NRDIDKSL----YWYEKAAENGNSFAMHNLASIYLKGEKVPLDLDKSERYAKQSI 277
Query: 260 DCGHGKAQ 267
G ++
Sbjct: 278 ASGQTASE 285
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+AS + +A + +A +G V N+ ++ + AAE + AM+N ++ + G G+
Sbjct: 64 EASDSADAQASFIMATIYAKGLSVAPNVDQSISYLTYAAELKHPEAMFNLAVAFELGRGV 123
Query: 245 PLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
S A W ++AA+ AQ L + G T + ++ + + A AG++ A
Sbjct: 124 NKSASDAVGWYQKAAEADFLPAQRKLALMYEKGKGTPVDAKQSYFWYKKAAEAGQSYAQL 183
Query: 301 VKNVILQQLSATSRD 315
IL Q +D
Sbjct: 184 KLGAILLQDKVVPKD 198
>gi|291613675|ref|YP_003523832.1| Sel1 domain protein repeat-containing protein [Sideroxydans
lithotrophicus ES-1]
gi|291583787|gb|ADE11445.1| Sel1 domain protein repeat-containing protein [Sideroxydans
lithotrophicus ES-1]
Length = 317
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 31/202 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +GRGV K+ +A+ + K A + + + G MY + + +A A+ LYR+A
Sbjct: 132 GAMYANGRGVVKDDVQAVQWYRKAAESNNANGLQNLGWMYANGLGVKRDDAHAVVLYRKA 191
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A LG H AQ L + GRGV + AA+WYL+AA
Sbjct: 192 AKLG-----------------------HAGAQNCLGVMYASGRGVAKDEAVAAQWYLKAA 228
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGE 279
+ G + A N L Y G+G+ QA KW RAA+ G AQ + +G G + +
Sbjct: 229 KKGDLDAQDNLGLMYIRGQGVARDTAQAYKWFSRAAEHGFANAQRNLGVMYGTGDGVKQD 288
Query: 280 MMKAVVYLELATRAGETAADHV 301
M KAV + A G A +
Sbjct: 289 MKKAVYWYRKAADQGHVEAQEI 310
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N A K ++++ G+ AQ LA RG G++ + +A WY +AAE G+ A N
Sbjct: 72 NYSLAAKWYRESAMQGYAPAQNNLATMYERGLGIEKDDVQAVMWYRKAAEQGFSIAQQNL 131
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
Y+ G G+ QA +W ++AA+ + G GL + + AVV A
Sbjct: 132 GAMYANGRGVVKDDVQAVQWYRKAAESNNANGLQNLGWMYANGLGVKRDDAHAVVLYRKA 191
Query: 291 TRAGETAADHVKNVILQQLSATSRDRAM 318
+ G A + V+ ++D A+
Sbjct: 192 AKLGHAGAQNCLGVMYASGRGVAKDEAV 219
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAM 231
PAN ++L + G A++ LA G G V N AA+WY +A GY A
Sbjct: 36 PANT---FQVLISLAERGDAIAEHDLAHIYENGTGGVSINYSLAAKWYRESAMQGYAPAQ 92
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
N + Y G G+ QA W ++AA+ G AQ G
Sbjct: 93 NNLATMYERGLGIEKDDVQAVMWYRKAAEQGFSIAQQNLG 132
>gi|149909665|ref|ZP_01898318.1| hypothetical protein PE36_12787 [Moritella sp. PE36]
gi|149807369|gb|EDM67322.1| hypothetical protein PE36_12787 [Moritella sp. PE36]
Length = 1046
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A A + +MY E DK++AA +LY++AA L
Sbjct: 384 GDGIEQDKQKAAALYQKAADLDHPGATCNLAIMYDNGDGIEQDKQKAA-ALYQKAADLDH 442
Query: 169 PAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P A + ++A L +A+ H + Y LA+ G++ + Q+A
Sbjct: 443 PGATSNLAIMYDNGDGIEQDKQKAAALYQKAANLDHPGSTYNLAIMYDSSDGIEQDKQKA 502
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL--- 272
A Y +AA+ G++ AMYN ++ Y G+G+ ++A ++AAD GH A +
Sbjct: 503 AALYQKAADLGHLGAMYNLAIMYDIGDGIEQDKQKAAALYQKAADLGHPDATCNLAIMYD 562
Query: 273 -GLFTEGEMMKAVVYLELATRAGETAA 298
G E + KA + A G + A
Sbjct: 563 NGDDIEQDKQKAAALYQKAADLGHSGA 589
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + K A A + +MY E DK++AA +LY++AA
Sbjct: 417 YDNGDGIEQDKQKAAALYQKAADLDHPGATSNLAIMYDNGDGIEQDKQKAA-ALYQKAAN 475
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
L P + + ++A L +A+ GH+ A Y LA+ G G++ +
Sbjct: 476 LDHPGSTYNLAIMYDSSDGIEQDKQKAAALYQKAADLGHLGAMYNLAIMYDIGDGIEQDK 535
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
Q+AA Y +AA+ G+ A N ++ Y G+ + ++A ++AAD GH A L
Sbjct: 536 QKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDKQKAAALYQKAADLGHSGATL 591
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ HG G+ ++ KA + K A A + +MY E DK++AA +LY++AA
Sbjct: 201 YDHGDGIEQDKQKAAALYQKAANLDHPGATCNLAIMYDIGDGIEQDKQKAA-ALYQKAAD 259
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
L P A + ++A L +A GH+ A LA+ H G G++ +
Sbjct: 260 LDHPGATCNLAVMYDHGEGIEQDKQKAAALYQKAVNLGHLGATCNLAVMYHHGDGIEQDK 319
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
Q+AA Y +AA + A N ++ Y GEG+ ++A ++AAD H A
Sbjct: 320 QKAAALYQKAANLDHPGATCNLAVMYDHGEGIEQDKQKAAALYQKAADLDHPGA 373
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + K A + + +MY E DK++AA +LY++AA
Sbjct: 453 YDNGDGIEQDKQKAAALYQKAANLDHPGSTYNLAIMYDSSDGIEQDKQKAA-ALYQKAAD 511
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG A + ++A L +A+ GH A LA+ G ++ +
Sbjct: 512 LGHLGAMYNLAIMYDIGDGIEQDKQKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDK 571
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Q+AA Y +AA+ G+ A N ++ Y G+G+ ++A ++AAD GH A L +
Sbjct: 572 QKAAALYQKAADLGHSGATLNLAIMYDSGDGIEQDKQKAADLYQKAADLGHSGATLNLAI 631
Query: 273 GLFTEGE-----MMKAVVYLELATRAG 294
++ +G+ + K++ E A G
Sbjct: 632 -MYNDGDGIEQNIQKSISLFERAIELG 657
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A G A + +MY E DK++AA +LY++AA LG
Sbjct: 528 GDGIEQDKQKAAALYQKAADLGHPDATCNLAIMYDNGDDIEQDKQKAA-ALYQKAADLGH 586
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + ++A L +A+ GH A LA+ + G G++ N+Q++
Sbjct: 587 SGATLNLAIMYDSGDGIEQDKQKAADLYQKAADLGHSGATLNLAIMYNDGDGIEQNIQKS 646
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ RA E G + +MY L Y G+ +++A + RAA GH K+ L
Sbjct: 647 ISLFERAIELGNIESMYALGLIYRNGK--VQDYKKAAELFTRAAQKGHQKSTL 697
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
E DK++AA +LY++AA LG A + ++A L +A+ GH+ A
Sbjct: 28 EQDKQKAA-ALYQKAADLGHLGATCNLAVMYHNGDGIEQDKQKAAALYQKAADLGHLGAT 86
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
LA+ H G G++ + Q+AA Y ++A+ G++ A N ++ Y+ G+G+ ++A
Sbjct: 87 CNLAVMYHNGDGIEQDKQKAAALYQKSADLGHLGATCNLAVMYNNGDGIEQDKQKAAALY 146
Query: 256 KRAADCGH 263
++AAD GH
Sbjct: 147 QKAADLGH 154
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 25/185 (13%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAVLGD 168
G G+ ++ KA + K A G A + +MY E DK++AA +LY++AA LG
Sbjct: 24 GDGIEQDKQKAAALYQKAADLGHLGATCNLAVMYHNGDGIEQDKQKAA-ALYQKAADLGH 82
Query: 169 PAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + ++A L +++ GH+ A LA+ + G G++ + Q+A
Sbjct: 83 LGATCNLAVMYHNGDGIEQDKQKAAALYQKSADLGHLGATCNLAVMYNNGDGIEQDKQKA 142
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLE 269
A Y +AA+ G++ A N ++ Y+ G+G+ ++A ++AA+ H A +
Sbjct: 143 AALYQKAADLGHLGATCNLAVMYNNGDGIEQDKQKAAALYQKAANLDHPGATCNLAVMYD 202
Query: 270 HGLGL 274
HG G+
Sbjct: 203 HGDGI 207
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +G G+ ++ KA + K A G A + +MY E DK++AA +LY++AA
Sbjct: 93 YHNGDGIEQDKQKAAALYQKSADLGHLGATCNLAVMYNNGDGIEQDKQKAA-ALYQKAAD 151
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG A + ++A L +A+ H A LA+ G G++ +
Sbjct: 152 LGHLGATCNLAVMYNNGDGIEQDKQKAAALYQKAANLDHPGATCNLAVMYDHGDGIEQDK 211
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA------ 266
Q+AA Y +AA + A N ++ Y G+G+ ++A ++AAD H A
Sbjct: 212 QKAAALYQKAANLDHPGATCNLAIMYDIGDGIEQDKQKAAALYQKAADLDHPGATCNLAV 271
Query: 267 QLEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+HG G+ E + KA + A G A
Sbjct: 272 MYDHGEGI--EQDKQKAAALYQKAVNLGHLGA 301
Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
+ HG G+ ++ KA + K G A + +MY E DK++AA +LY++AA
Sbjct: 273 YDHGEGIEQDKQKAAALYQKAVNLGHLGATCNLAVMYHHGDGIEQDKQKAA-ALYQKAAN 331
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
L P A + ++A L +A+ H A LA+ G G++ +
Sbjct: 332 LDHPGATCNLAVMYDHGEGIEQDKQKAAALYQKAADLDHPGATCNLAIMYDIGDGIEQDK 391
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
Q+AA Y +AA+ + A N ++ Y G+G+ ++A ++AAD H A
Sbjct: 392 QKAAALYQKAADLDHPGATCNLAIMYDNGDGIEQDKQKAAALYQKAADLDHPGA 445
Score = 44.7 bits (104), Expect = 0.067, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y A L+ G G++ + Q+AA Y +AA+ G++ A N ++ Y G+G+ ++A
Sbjct: 15 YDYAFNLYTGDGIEQDKQKAAALYQKAADLGHLGATCNLAVMYHNGDGIEQDKQKAAALY 74
Query: 256 KRAADCGH 263
++AAD GH
Sbjct: 75 QKAADLGH 82
>gi|269468898|gb|EEZ80485.1| hypothetical protein Sup05_0100 [uncultured SUP05 cluster
bacterium]
Length = 187
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 23/163 (14%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYW-------EMDKKEAAISLYRQAAVLGDPAAQ---- 172
AL F+ A +G+T A + GLM+ +M+K AI + +AA GD AQ
Sbjct: 12 ALKEFVPLAKKGNTKAQLSLGLMHQYGTGLPVDMNK---AIQWFLKAAHGGDKIAQSWLA 68
Query: 173 ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
P + EA K +A+ GH +Q L L G+G++ + +++ WY AA
Sbjct: 69 MMYTFGNGVPLDNTEAFKWFSKAANQGHPSSQDMLGLMYQSGKGIEVDYKKSFYWYNLAA 128
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
G+ +A +N + Y+ G G+ + +A KW ++AD G+ A
Sbjct: 129 NQGHAQAQFNLAEMYAKGLGVEMDKNKALKWHSKSADQGYSDA 171
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ +AQ L L G G+ ++ +A +W+L+AA GG A ++ Y+FG G+PL +
Sbjct: 23 GNTKAQLSLGLMHQYGTGLPVDMNKAIQWFLKAAHGGDKIAQSWLAMMYTFGNGVPLDNT 82
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
+A KW +AA+ GH +Q GL G E + K+ + LA G A
Sbjct: 83 EAFKWFSKAANQGHPSSQDMLGLMYQSGKGIEVDYKKSFYWYNLAANQGHAQA 135
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 29/150 (19%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISL 159
L G ++G G+ +++KA+ FLK A G +A +MY +D EA
Sbjct: 29 LSLGLMHQYGTGLPVDMNKAIQWFLKAAHGGDKIAQSWLAMMYTFGNGVPLDNTEA-FKW 87
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQ------------------ASIAGHVRAQYQLALC 201
+ +AA G P++Q + + L+YQ A+ GH +AQ+ LA
Sbjct: 88 FSKAANQGHPSSQ-----DMLGLMYQSGKGIEVDYKKSFYWYNLAANQGHAQAQFNLAEM 142
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
+G GV+ + +A +W+ ++A+ GY A+
Sbjct: 143 YAKGLGVEMDKNKALKWHSKSADQGYSDAI 172
>gi|145629738|ref|ZP_01785534.1| hypothetical protein CGSHi22121_00677 [Haemophilus influenzae
22.1-21]
gi|144978075|gb|EDJ87854.1| hypothetical protein CGSHi22121_00677 [Haemophilus influenzae
22.1-21]
Length = 219
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK +A+ GH +AQ+ L + +G+GV + +A +WY +AAE GY A N
Sbjct: 83 EAVKWYRKAAEQGHAKAQFNLGVMYAKGQGVKQDDFKAVKWYRKAAEQGYADAQANLGSA 142
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
YS G G+ + +A KW K+AA+ G Q + GL
Sbjct: 143 YSAGRGVRQDYIEAVKWFKKAAENGSADGQFKLGL 177
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A V G ++ G GV+++ +A+ + K A +G A + G+MY
Sbjct: 60 DANVQFNLGVMYEDGLGVKQDDFEAVKWYRKAAEQGHAKAQFNLGVMY------------ 107
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
G Q + +AVK +A+ G+ AQ L GRGV + EA +W+
Sbjct: 108 -----AKGQGVKQ--DDFKAVKWYRKAAEQGYADAQANLGSAYSAGRGVRQDYIEAVKWF 160
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+AAE G + L Y G+ + A++W +A D G
Sbjct: 161 KKAAENGSADGQFKLGLVYLIGQSIQKDRTLAKEWFGKACDNGE 204
>gi|114777221|ref|ZP_01452232.1| Sel1-like repeat [Mariprofundus ferrooxydans PV-1]
gi|114552366|gb|EAU54849.1| Sel1-like repeat [Mariprofundus ferrooxydans PV-1]
Length = 370
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
+I G+ AQ L + + GRGV N E A W +RAA GY A YN S+ Y G G+ +
Sbjct: 137 AIDGNASAQATLGVMYYEGRGVTQNYSEGADWLIRAANSGYANAQYNLSIAYGQGNGVAI 196
Query: 247 SHRQARKWMKRAADCGHGKAQ 267
+A WM++AA GH A+
Sbjct: 197 DIDEAIIWMEKAASQGHAAAK 217
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGST-----LAMVDAGLMYWEMDKKEAAISLYRQAAV 165
+ G GV ++D+A+ K A++G L MV K + +S+Y AA
Sbjct: 188 YGQGNGVAIDIDEAIIWMEKAASQGHAAAKRALPMVKQEQARLANSKLDKDVSVYLSAAE 247
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+P A N +EA+K +++ G Q + + +GRGV N
Sbjct: 248 SGNPEAMFRYGMLFEDGTGVARNMDEAIKWYKKSAEKGFAVGQTYMGVIYDKGRGVRQNN 307
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A WY + A GG +A +N +CY G G +W++++A+ G+ A+
Sbjct: 308 TTAFEWYKKGATGGDAQAQFNLGICYITGRGTQKDEAIGSEWIRKSANNGYESAK 362
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + GRGV +N + D ++ A G A + + Y + +D EA I + +
Sbjct: 149 GVMYYEGRGVTQNYSEGADWLIRAANSGYANAQYNLSIAYGQGNGVAIDIDEAIIWM-EK 207
Query: 163 AAVLGDPAAQPA--------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
AA G AA+ A ++ V + A+ +G+ A ++ + G GV
Sbjct: 208 AASQGHAAAKRALPMVKQEQARLANSKLDKDVSVYLSAAESGNPEAMFRYGMLFEDGTGV 267
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N+ EA +WY ++AE G+ + Y G G+ ++ A +W K+ A G +AQ
Sbjct: 268 ARNMDEAIKWYKKSAEKGFAVGQTYMGVIYDKGRGVRQNNTTAFEWYKKGATGGDAQAQF 327
Query: 269 EHGLGLFT 276
G+ T
Sbjct: 328 NLGICYIT 335
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
+ R+G F+ G GV +N+D+A+ + K A +G + G++Y DK RQ
Sbjct: 254 MFRYGMLFEDGTGVARNMDEAIKWYKKSAEKGFAVGQTYMGVIY---DKGRGV----RQ- 305
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
N A + + + G +AQ+ L +C GRG + + W ++A
Sbjct: 306 -----------NNTTAFEWYKKGATGGDAQAQFNLGICYITGRGTQKDEAIGSEWIRKSA 354
Query: 224 EGGYVRA 230
GY A
Sbjct: 355 NNGYESA 361
>gi|294776573|ref|ZP_06742043.1| Sel1 repeat protein [Bacteroides vulgatus PC510]
gi|294449561|gb|EFG18091.1| Sel1 repeat protein [Bacteroides vulgatus PC510]
Length = 281
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 119 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------K 159
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + EEA +A+ + AQY + G G++ + + A W +AA G
Sbjct: 160 NGLGVPKDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKAALQGN 219
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 220 APAQYNLGRMYQWGKGVKKDLQQARFWFQKAIDNGHEKAK 259
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 95/236 (40%), Gaps = 23/236 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + G G + DKAL F + AA G+T A + G MY D +A L R
Sbjct: 47 GDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNR- 105
Query: 163 AAVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVD 209
AA G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 106 AATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVP 165
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EA W+ +AA+ A YN Y +GEG+ + +W+ +AA G+ AQ
Sbjct: 166 KDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKAALQGNAPAQYN 225
Query: 270 HG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
G G + ++ +A + + A G A I LS + +L
Sbjct: 226 LGRMYQWGKGVKKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEDPLLFT 281
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q A E ++ + A H AQY +G G + + +A + + ++A GG A
Sbjct: 22 QYEKARELLEKIAHIDTAHH--AQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAE 79
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
N Y++G G+ + QA KW+ RAA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 80 NNIGFMYTYGLGVTKDYSQAFKWLNRAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 136
>gi|393779651|ref|ZP_10367888.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392609846|gb|EIW92644.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 811
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV K+ KA++ K A G A+ G Y+ Y + ++G
Sbjct: 222 YLEGKGVEKSEAKAIEMLEKAAKGGDAEALYQLGNFYF-----------YGNSPLIGK-- 268
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV-R 229
++A+ QA+ G+ AQ QLALC + G G + + +EA W L++ +
Sbjct: 269 ----YYKKAINYYTQAANKGNAVAQAQLALCFYNGIGTNASPKEAFSWILKSVNTNPTPK 324
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM--MKAVVYL 287
A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++ K YL
Sbjct: 325 AQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNILLQEGQLDVKKGFDYL 384
Query: 288 E 288
E
Sbjct: 385 E 385
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q AN ++ +KL + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 19 QDANVKKLIKL----AEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 725 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 784
Query: 251 ARKWMKRAADCGHGKA 266
A W ++A D G KA
Sbjct: 785 AADWFEQACDNGEKKA 800
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV L + + G + AQYQLA C G+GV + Q+ W + A+ G A +L
Sbjct: 56 QEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G+G+ S + +++ A+ + + QL+ + G ++ KA + E A++
Sbjct: 116 CYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASK 175
Query: 293 AGETAAD 299
G + A+
Sbjct: 176 NGNSEAE 182
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 88/233 (37%), Gaps = 74/233 (31%)
Query: 100 EAMVLLRWGKRFKHGRG--VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDK 152
+A L + G + +G + K KA++ + + A +G+ +A L ++
Sbjct: 247 DAEALYQLGNFYFYGNSPLIGKYYKKAINYYTQAANKGNAVAQAQLALCFYNGIGTNASP 306
Query: 153 KEAAISLYRQAAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQL 198
KEA + + P AQ P+NA+ A++ +A+ AG V AQY L
Sbjct: 307 KEAFSWILKSVNTNPTPKAQNNLGVCYAVGIGAHPSNAQ-ALEFFQKAAEAGDVTAQYNL 365
Query: 199 A-LCLHRG-----RGVDF----------------------------NLQEAARWYLRAA- 223
+ L G +G D+ + + A +Y +A+
Sbjct: 366 GNILLQEGQLDVKKGFDYLEKAAAANHLLALKKLGDLYFNGKYTNQSFERAFEYYTKASK 425
Query: 224 -----------------EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
E Y +YN S CY+ G+G+ S R+A KW +AA
Sbjct: 426 QTPTPQKEMLDYFYQGQEEAYADVLYNLSQCYAEGKGVKKSMREASKWAVKAA 478
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL---RAAEGGYVR 229
P + ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y + AE
Sbjct: 88 PKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIEKHAEKENPE 144
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 26/177 (14%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
V L K + G GV K+++KA + + G++ A + +E++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEMLLASWTYEVN----------- 193
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
A+ P EA+K L Q + G+ AQ LA G+GV+ + +A +A
Sbjct: 194 -------ASNP----EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKA 242
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPL---SHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
A+GG A+Y Y +G PL +++A + +AA+ G+ AQ + L +
Sbjct: 243 AKGGDAEALYQLGNFYFYGNS-PLIGKYYKKAINYYTQAANKGNAVAQAQLALCFYN 298
>gi|396082401|gb|AFN84010.1| Sel1 repeat-containing protein [Encephalitozoon romaleae SJ-2008]
Length = 588
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G F G GV KN + A++ F + + + A+ + G Y E E A +Y+ +
Sbjct: 174 GYCFLKGFGVEKNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNFFKAFEMYKLS 233
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ + + AQ A + ++A + ++++ G+ Q LA C +G G
Sbjct: 234 SKMENSYAQNALGNCYEEGKGVNRDLQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKK 293
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA---- 266
LQ+A WY RAA G RA +N CY G G P +A W K +A + +
Sbjct: 294 CLQKAFEWYKRAAVQGLSRAKHNIGYCYQNGLGTPQCMSKAIYWYKESASESNKHSIHAL 353
Query: 267 --QLEHGLGL----------FTEGE---MMKAVVYLELATRAG 294
+HG G+ F EG +A++ L L R+G
Sbjct: 354 GVCYQHGYGVSRDERLAVRYFNEGAKAGFDEAIISLALCYRSG 396
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKK--EAAISLYRQA 163
G ++ G+GV ++L KA + + K A +G + Y + KK + A Y++A
Sbjct: 246 GNCYEEGKGVNRDLQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKKCLQKAFEWYKRA 305
Query: 164 AVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AV G + P +A+ +++ + + + L +C G GV
Sbjct: 306 AVQGLSRAKHNIGYCYQNGLGTPQCMSKAIYWYKESASESNKHSIHALGVCYQHGYGVSR 365
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + A R++ A+ G+ A+ + +LCY G G+ +S ++ MKRAA+ + AQ +
Sbjct: 366 DERLAVRYFNEGAKAGFDEAIISLALCYRSGTGVRISPEKSFSLMKRAAEMNNASAQ--N 423
Query: 271 GLGLFTE 277
LG + E
Sbjct: 424 TLGYYYE 430
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 137 TLAMVDAGLMYWEMD-KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQ 195
TL + + ++EM K++ + +L+ +++ + P + + V LL+++ G+ RA
Sbjct: 435 TLKNIREAIRWYEMSAKQDNSWALFNLSSLYFNGVHIPPDEKLGVSLLFRSRDLGNPRAA 494
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
L C +G GV+ N + A Y +A GY +A YN CY G G + +A +
Sbjct: 495 NTLGYCFEKGIGVEKNPKLAFEHYTQAFINGYSKAGYNLGRCYENGIGTGIDLDKALYYF 554
Query: 256 KRAADCG 262
+++ G
Sbjct: 555 YKSSSVG 561
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV ++ A+ F +GA G A++ L Y + + +
Sbjct: 354 GVCYQHGYGVSRDERLAVRYFNEGAKAGFDEAIISLALCY----RSGTGVRI-------- 401
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ E++ L+ +A+ + AQ L G G N++EA RWY +A+
Sbjct: 402 -------SPEKSFSLMKRAAEMNNASAQNTLGYYYEEGYGTLKNIREAIRWYEMSAKQDN 454
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A++N S Y G +P + + R+ D G+ +A E G+G+
Sbjct: 455 SWALFNLSSLYFNGVHIPPDEKLGVSLLFRSRDLGNPRAANTLGYCFEKGIGV 507
>gi|451981429|ref|ZP_21929785.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
gi|451761383|emb|CCQ91045.1| putative Beta-lactamase [Nitrospina gracilis 3/211]
Length = 373
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++GRGV +++ A++ F K A A+ + G Y K R A V
Sbjct: 170 YQNGRGVERDVSTAVEWFKKAAQEKQPWALFEIGWYY-----KNGTGGFKRSAPV----- 219
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+K ++ G+V QY AL G G D ++ + W + AA+ G++ +
Sbjct: 220 --------ALKWFEESGKGGYVMGQYHAALAYMEGIGTDKDINKGREWLILAADQGHLDS 271
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVV 285
Y G + + ++A ++K AA+ GH AQ+ + ++ G+++K A
Sbjct: 272 QAILGDMYYHGTSVVIDDKKAHTYLKPAAERGHPLAQMNLAM-MYENGDVVKKDIVQAYQ 330
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 327
+ LA G A I ++ + + +A V SW+ +
Sbjct: 331 WYSLAAARGNKDAQRSLEFITPRIKTSKKQKADAWVASWKPI 372
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 62/172 (36%), Gaps = 56/172 (32%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE------------------------- 224
G+ A + +A GRGV+ ++ A W+ +AA+
Sbjct: 158 GNPEAMWYVANMYQNGRGVERDVSTAVEWFKKAAQEKQPWALFEIGWYYKNGTGGFKRSA 217
Query: 225 ------------GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----- 267
GGYV Y+ +L Y G G + R+W+ AAD GH +Q
Sbjct: 218 PVALKWFEESGKGGYVMGQYHAALAYMEGIGTDKDINKGREWLILAADQGHLDSQAILGD 277
Query: 268 -LEHGLGLFTEGEMMKAVVYLELATRAGETAA-----------DHVKNVILQ 307
HG + + + KA YL+ A G A D VK I+Q
Sbjct: 278 MYYHGTSVVIDDK--KAHTYLKPAAERGHPLAQMNLAMMYENGDVVKKDIVQ 327
>gi|254293295|ref|YP_003059318.1| Sel1 domain-containing protein repeat-containing protein [Hirschia
baltica ATCC 49814]
gi|254041826|gb|ACT58621.1| Sel1 domain protein repeat-containing protein [Hirschia baltica ATCC
49814]
Length = 1303
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A + + +A+ G AQY++ RG GV +++E+ +W AAE G V+AM++ ++ Y
Sbjct: 1068 AAETMRKAADQGLAAAQYRMGKLYERGEGVPRSIKESRKWTKLAAENGNVKAMHDLAVFY 1127
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATR 292
+ GEG S +W RAA+ G +Q E GLG+ T ++ KA + E+A
Sbjct: 1128 AEGEGGEQSFLSGVEWFSRAAEYGLIDSQYNLGVLYEQGLGVST--DLAKAAYWFEVAGH 1185
Query: 293 AGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G+ IL+ L +T ++ + D++
Sbjct: 1186 NGDADGTRRAREILRNLPSTEANKIIADADAF 1217
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEE 178
AA GS +A+ + + +K A R+AA G AAQ P + +E
Sbjct: 1044 AASGSPIALHELAIKQLASGEKRIAAETMRKAADQGLAAAQYRMGKLYERGEGVPRSIKE 1103
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
+ K A+ G+V+A + LA+ G G + + W+ RAAE G + + YN + Y
Sbjct: 1104 SRKWTKLAAENGNVKAMHDLAVFYAEGEGGEQSFLSGVEWFSRAAEYGLIDSQYNLGVLY 1163
Query: 239 SFGEGLPLSHRQARKWMKRAADCG 262
G G+ +A W + A G
Sbjct: 1164 EQGLGVSTDLAKAAYWFEVAGHNG 1187
>gi|421358796|ref|ZP_15809093.1| hypothetical protein SEEE3139_12155 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421362764|ref|ZP_15813016.1| hypothetical protein SEEE0166_09112 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421367966|ref|ZP_15818159.1| hypothetical protein SEEE0631_12331 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421387807|ref|ZP_15837806.1| hypothetical protein SEEE6622_21043 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391911|ref|ZP_15841877.1| hypothetical protein SEEE6670_18996 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394886|ref|ZP_15844825.1| hypothetical protein SEEE6426_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421403249|ref|ZP_15853103.1| hypothetical protein SEEE7246_08361 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421425856|ref|ZP_15875490.1| hypothetical protein SEEE5101_08578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421433483|ref|ZP_15883043.1| hypothetical protein SEEE5518_00947 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441178|ref|ZP_15890648.1| hypothetical protein SEEE1618_16969 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|436811250|ref|ZP_20530130.1| hypothetical protein SEEE1882_20062 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436815624|ref|ZP_20533175.1| hypothetical protein SEEE1884_12578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436846951|ref|ZP_20539583.1| hypothetical protein SEEE1594_22300 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851213|ref|ZP_20541812.1| hypothetical protein SEEE1566_10588 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436857978|ref|ZP_20546498.1| hypothetical protein SEEE1580_11685 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865154|ref|ZP_20551121.1| hypothetical protein SEEE1543_12485 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436875673|ref|ZP_20557580.1| hypothetical protein SEEE1441_22716 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436883203|ref|ZP_20561632.1| hypothetical protein SEEE1810_20559 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887936|ref|ZP_20564265.1| hypothetical protein SEEE1558_10994 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896275|ref|ZP_20569031.1| hypothetical protein SEEE1018_12147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436906253|ref|ZP_20575099.1| hypothetical protein SEEE1010_20306 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911799|ref|ZP_20577628.1| hypothetical protein SEEE1729_10470 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920036|ref|ZP_20582775.1| hypothetical protein SEEE0895_13655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436930343|ref|ZP_20588568.1| hypothetical protein SEEE0899_20031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436935751|ref|ZP_20591191.1| hypothetical protein SEEE1457_10511 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942940|ref|ZP_20595886.1| hypothetical protein SEEE1747_11677 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436951567|ref|ZP_20600622.1| hypothetical protein SEEE0968_12729 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436964725|ref|ZP_20606361.1| hypothetical protein SEEE1444_18941 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436971300|ref|ZP_20609693.1| hypothetical protein SEEE1445_12921 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985369|ref|ZP_20614889.1| hypothetical protein SEEE1559_16657 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436991662|ref|ZP_20617673.1| hypothetical protein SEEE1565_07860 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437012123|ref|ZP_20624636.1| hypothetical protein SEEE1808_20573 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437020907|ref|ZP_20627718.1| hypothetical protein SEEE1811_13214 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437029802|ref|ZP_20630984.1| hypothetical protein SEEE0956_06831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437042559|ref|ZP_20636150.1| hypothetical protein SEEE1455_10136 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052277|ref|ZP_20641700.1| hypothetical protein SEEE1575_15591 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058271|ref|ZP_20645118.1| hypothetical protein SEEE1725_10304 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437069250|ref|ZP_20651205.1| hypothetical protein SEEE1745_18316 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075961|ref|ZP_20654324.1| hypothetical protein SEEE1791_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437086478|ref|ZP_20660487.1| hypothetical protein SEEE1795_19797 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437095549|ref|ZP_20664653.1| hypothetical protein SEEE6709_18262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437117626|ref|ZP_20670069.1| hypothetical protein SEEE9058_22759 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437123720|ref|ZP_20673086.1| hypothetical protein SEEE0816_15282 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437134682|ref|ZP_20679106.1| hypothetical protein SEEE0819_22919 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437146934|ref|ZP_20686486.1| hypothetical protein SEEE3089_14441 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437167217|ref|ZP_20698535.1| hypothetical protein SEEEN202_07122 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437265924|ref|ZP_20720739.1| hypothetical protein SEEEL909_02688 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437282154|ref|ZP_20729155.1| hypothetical protein SEEEL913_22561 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437308258|ref|ZP_20735299.1| hypothetical protein SEEE7015_08262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437424589|ref|ZP_20755253.1| hypothetical protein SEEE2217_18397 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437462423|ref|ZP_20762574.1| hypothetical protein SEEE6211_09499 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437478353|ref|ZP_20767366.1| hypothetical protein SEEE4441_10999 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437487488|ref|ZP_20769900.1| hypothetical protein SEEE4647_00956 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437503696|ref|ZP_20774861.1| hypothetical protein SEEE9845_03593 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437557102|ref|ZP_20785063.1| hypothetical protein SEEE0116_09594 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437581089|ref|ZP_20792235.1| hypothetical protein SEEE1117_23006 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437584789|ref|ZP_20792847.1| hypothetical protein SEEE1392_03164 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437624665|ref|ZP_20805301.1| hypothetical protein SEEE0316_20891 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437641806|ref|ZP_20807998.1| hypothetical protein SEEE0436_11640 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437660158|ref|ZP_20812395.1| hypothetical protein SEEE1319_10307 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437680855|ref|ZP_20818426.1| hypothetical protein SEEE4481_18368 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437695535|ref|ZP_20822176.1| hypothetical protein SEEE6297_13709 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437726703|ref|ZP_20830186.1| hypothetical protein SEEE1616_08346 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|395986486|gb|EJH95650.1| hypothetical protein SEEE0631_12331 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395987236|gb|EJH96399.1| hypothetical protein SEEE3139_12155 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395990588|gb|EJH99719.1| hypothetical protein SEEE0166_09112 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|396008632|gb|EJI17566.1| hypothetical protein SEEE6622_21043 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396010874|gb|EJI19786.1| hypothetical protein SEEE6670_18996 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396013623|gb|EJI22510.1| hypothetical protein SEEE6426_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396030280|gb|EJI39015.1| hypothetical protein SEEE7246_08361 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396055709|gb|EJI64186.1| hypothetical protein SEEE5101_08578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396061887|gb|EJI70303.1| hypothetical protein SEEE5518_00947 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396064781|gb|EJI73164.1| hypothetical protein SEEE1618_16969 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|434963881|gb|ELL56903.1| hypothetical protein SEEE1882_20062 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434973740|gb|ELL66128.1| hypothetical protein SEEE1884_12578 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434977115|gb|ELL69264.1| hypothetical protein SEEE1594_22300 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434986515|gb|ELL78166.1| hypothetical protein SEEE1566_10588 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990130|gb|ELL81680.1| hypothetical protein SEEE1580_11685 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995264|gb|ELL86581.1| hypothetical protein SEEE1441_22716 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|434996189|gb|ELL87505.1| hypothetical protein SEEE1543_12485 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001648|gb|ELL92737.1| hypothetical protein SEEE1810_20559 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435009646|gb|ELM00432.1| hypothetical protein SEEE1558_10994 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014830|gb|ELM05387.1| hypothetical protein SEEE1010_20306 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435016164|gb|ELM06690.1| hypothetical protein SEEE1018_12147 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435026044|gb|ELM16175.1| hypothetical protein SEEE1729_10470 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435028101|gb|ELM18181.1| hypothetical protein SEEE0895_13655 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435031998|gb|ELM21942.1| hypothetical protein SEEE0899_20031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435038589|gb|ELM28370.1| hypothetical protein SEEE1457_10511 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435043139|gb|ELM32856.1| hypothetical protein SEEE1747_11677 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435048582|gb|ELM38147.1| hypothetical protein SEEE1444_18941 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435052034|gb|ELM41536.1| hypothetical protein SEEE0968_12729 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435057589|gb|ELM46958.1| hypothetical protein SEEE1445_12921 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435062209|gb|ELM51391.1| hypothetical protein SEEE1559_16657 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435063443|gb|ELM52591.1| hypothetical protein SEEE1808_20573 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068239|gb|ELM57268.1| hypothetical protein SEEE1565_07860 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435079535|gb|ELM68246.1| hypothetical protein SEEE1811_13214 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435082836|gb|ELM71447.1| hypothetical protein SEEE0956_06831 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435084484|gb|ELM73070.1| hypothetical protein SEEE1455_10136 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435090877|gb|ELM79278.1| hypothetical protein SEEE1575_15591 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435092668|gb|ELM81023.1| hypothetical protein SEEE1745_18316 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435094084|gb|ELM82423.1| hypothetical protein SEEE1725_10304 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435102624|gb|ELM90727.1| hypothetical protein SEEE1795_19797 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435105258|gb|ELM93295.1| hypothetical protein SEEE1791_11197 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435109926|gb|ELM97872.1| hypothetical protein SEEE6709_18262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435113064|gb|ELN00922.1| hypothetical protein SEEE9058_22759 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435120161|gb|ELN07763.1| hypothetical protein SEEE0819_22919 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435120959|gb|ELN08519.1| hypothetical protein SEEE0816_15282 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435134564|gb|ELN21690.1| hypothetical protein SEEE3089_14441 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435151839|gb|ELN38478.1| hypothetical protein SEEEN202_07122 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435168772|gb|ELN54604.1| hypothetical protein SEEEL913_22561 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177288|gb|ELN62620.1| hypothetical protein SEEEL909_02688 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435185853|gb|ELN70709.1| hypothetical protein SEEE7015_08262 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435200154|gb|ELN84167.1| hypothetical protein SEEE2217_18397 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435219089|gb|ELO01452.1| hypothetical protein SEEE6211_09499 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435221172|gb|ELO03445.1| hypothetical protein SEEE4441_10999 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435232896|gb|ELO13973.1| hypothetical protein SEEE4647_00956 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435236815|gb|ELO17531.1| hypothetical protein SEEE9845_03593 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435240403|gb|ELO20807.1| hypothetical protein SEEE1117_23006 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435241208|gb|ELO21574.1| hypothetical protein SEEE0116_09594 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435253859|gb|ELO33280.1| hypothetical protein SEEE0316_20891 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435262332|gb|ELO41444.1| hypothetical protein SEEE1392_03164 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435269354|gb|ELO47898.1| hypothetical protein SEEE1319_10307 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435271171|gb|ELO49642.1| hypothetical protein SEEE4481_18368 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435275895|gb|ELO53938.1| hypothetical protein SEEE0436_11640 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435277811|gb|ELO55743.1| hypothetical protein SEEE6297_13709 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435291634|gb|ELO68446.1| hypothetical protein SEEE1616_08346 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
Length = 356
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 23/221 (10%)
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
+G DF+ +F L + +A W L ++ G + +G G
Sbjct: 84 QGSDFSYFILGYHYNYGENFPLSRQKALE-----WYRKAAELGDSSTQEILGDAYMYGDG 138
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ 172
+N AL+ + + AA+G A G+M+ + + + A++ YR+AA G PAAQ
Sbjct: 139 FPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQ 198
Query: 173 P-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ +A+ +A+ +AQYQL + GRGV N + A +WY
Sbjct: 199 THLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWY 258
Query: 220 LRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
L+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 259 LKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 299
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LGD + Q P N + A++ +A+ G AQ + + +G GV
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQ 177
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 178 DYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQL 237
Query: 271 GLGLFT 276
G+ T
Sbjct: 238 GVAYST 243
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRA---GETAADHVKNVILQQLSATSRD 315
RA G A V+ Q S+D
Sbjct: 150 YRRAAAQGLAEAQDAIGVMFMQGEGVSQD 178
>gi|123380240|ref|XP_001298406.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878955|gb|EAX85476.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 494
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
++ G+G+ +NL +A F A + A GLMY + D E A YR AA
Sbjct: 119 YQLGKGIEQNLPEAAKYFRMAADQNLAAAQFCLGLMYEQGDGVEQNPEEAARYYRLAADQ 178
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ P N EA K + ++ +Q A L +G GV N+
Sbjct: 179 GDVDAQCNLAAMLYKGAGIPQNLREAAKYFKRGAVQNDPDSQCNYATMLLKGEGVRPNVA 238
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
EAAR++ AA+ G A + L G G L A ++ ++AAD GH AQ
Sbjct: 239 EAARYFKSAADQGLPEAQFCYGLMLETGNGERLDSEAAIRYYRKAADAGHPLAQ 292
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G +++G G +N +A + A +G A +MY E + EAA +R
Sbjct: 80 GVMYENGEGCNQNFQQAAHYYKLAADKGIAAAQNYLAIMYQLGKGIEQNLPEAA-KYFRM 138
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AAQ N EEA + A+ G V AQ LA L++G G+
Sbjct: 139 AADQNLAAAQFCLGLMYEQGDGVEQNPEEAARYYRLAADQGDVDAQCNLAAMLYKGAGIP 198
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
NL+EAA+++ R A + N + GEG+ + +A ++ K AAD G +AQ
Sbjct: 199 QNLREAAKYFKRGAVQNDPDSQCNYATMLLKGEGVRPNVAEAARYFKSAADQGLPEAQFC 258
Query: 270 HGLGLFT-EGEMMK---AVVYLELATRAG 294
+GL L T GE + A+ Y A AG
Sbjct: 259 YGLMLETGNGERLDSEAAIRYYRKAADAG 287
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N++ Q + G +Q+ L + G G + N Q+AA +Y AA+ G A
Sbjct: 54 PKNSKTGFSRYLQKAEHGDTESQFYLGVMYENGEGCNQNFQQAAHYYKLAADKGIAAAQN 113
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYL 287
++ Y G+G+ + +A K+ + AAD AQ GL ++ +G+ + +A Y
Sbjct: 114 YLAIMYQLGKGIEQNLPEAAKYFRMAADQNLAAAQFCLGL-MYEQGDGVEQNPEEAARYY 172
Query: 288 ELATRAGETAA 298
LA G+ A
Sbjct: 173 RLAADQGDVDA 183
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA 176
+ KN +L+ A G T + G+MY + E ++QAA
Sbjct: 53 IPKNSKTGFSRYLQKAEHGDTESQFYLGVMY---ENGEGCNQNFQQAA------------ 97
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
KL IA AQ LA+ G+G++ NL EAA+++ AA+ A + L
Sbjct: 98 -HYYKLAADKGIAA---AQNYLAIMYQLGKGIEQNLPEAAKYFRMAADQNLAAAQFCLGL 153
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y G+G+ + +A ++ + AAD G AQ
Sbjct: 154 MYEQGDGVEQNPEEAARYYRLAADQGDVDAQ 184
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 87/225 (38%), Gaps = 38/225 (16%)
Query: 78 LPQ-LRAASLVCK---SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA 133
+PQ LR A+ K ND A +LL+ G GVR N+ +A F A
Sbjct: 197 IPQNLREAAKYFKRGAVQNDPDSQCNYATMLLK-------GEGVRPNVAEAARYFKSAAD 249
Query: 134 RGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA 189
+G A GLM E EAAI YR+AA A
Sbjct: 250 QGLPEAQFCYGLMLETGNGERLDSEAAIRYYRKAAD-----------------------A 286
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH AQ LA + GRG N QEAA ++ +A + + A GEG
Sbjct: 287 GHPLAQTNLAKMMRVGRGAMKNPQEAANFFEKAYKSNNIEATAYFGEMKFLGEGTSKDEN 346
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAG 294
++ + +AA+ G A + G + ++ V + +A AG
Sbjct: 347 LGKQLILQAAEQGEPAALIWRGEFKIADKKIEDGVKDIRVAADAG 391
>gi|437248003|ref|ZP_20714969.1| hypothetical protein SEEE1831_22808, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435168778|gb|ELN54605.1| hypothetical protein SEEE1831_22808, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
Length = 343
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 23/221 (10%)
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
+G DF+ +F L + +A W L ++ G + +G G
Sbjct: 71 QGSDFSYFILGYHYNYGENFPLSRQKALE-----WYRKAAELGDSSTQEILGDAYMYGDG 125
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQ 172
+N AL+ + + AA+G A G+M+ + + + A++ YR+AA G PAAQ
Sbjct: 126 FPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQ 185
Query: 173 P-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ +A+ +A+ +AQYQL + GRGV N + A +WY
Sbjct: 186 THLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWY 245
Query: 220 LRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
L+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 246 LKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 286
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 45 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 104
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LGD + Q P N + A++ +A+ G AQ + + +G GV
Sbjct: 105 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQ 164
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ Q+A WY +AA G A + + +FG G+ S RQA W ++AA KAQ +
Sbjct: 165 DYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQL 224
Query: 271 GLGLFT 276
G+ T
Sbjct: 225 GVAYST 230
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 17 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 76
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 77 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 136
Query: 290 ATRA---GETAADHVKNVILQQLSATSRD 315
RA G A V+ Q S+D
Sbjct: 137 YRRAAAQGLAEAQDAIGVMFMQGEGVSQD 165
>gi|392967500|ref|ZP_10332918.1| hypothetical protein BN8_04191 [Fibrisoma limi BUZ 3]
gi|387844297|emb|CCH54966.1| hypothetical protein BN8_04191 [Fibrisoma limi BUZ 3]
Length = 640
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 136 STLAMVDA----GLMYWEMDKKEAAISLYRQAAVLGDPAAQPA-------------NAEE 178
+ L+M D+ G Y+++ + AI Y++AA LG P Q N E
Sbjct: 446 AALSMADSCYEVGYQYYQVRDYKKAIYWYQKAANLGSPIGQTNLGYMYEHELGVARNYTE 505
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+K +A+ AG+ Q L + G G + +A +WY AAE G N + Y
Sbjct: 506 ALKWYQKAATAGNADGQNNLGSMYYNGLGTSKDYTQALKWYRAAAEQGNAGGQINLGIMY 565
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAG 294
G G+ + +A KW RAA+ G+ Q G LG E KAV + ++ R G
Sbjct: 566 DEGHGVAANKTEALKWYMRAANQGNADGQYYVGTLYELGEGVEQNENKAVQWYRVSARQG 625
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++H GV +N +AL + K A G+ + G MY+
Sbjct: 490 GYMYEHELGVARNYTEALKWYQKAATAGNADGQNNLGSMYY------------------- 530
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + +A+K A+ G+ Q L + G GV N EA +WY+RAA G
Sbjct: 531 NGLGTSKDYTQALKWYRAAAEQGNAGGQINLGIMYDEGHGVAANKTEALKWYMRAANQGN 590
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y Y GEG+ + +A +W + +A G+ AQ
Sbjct: 591 ADGQYYVGTLYELGEGVEQNENKAVQWYRVSARQGNRNAQ 630
>gi|221068950|ref|ZP_03545055.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220713973|gb|EED69341.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 542
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV ++ A F + A + A + G +Y A LG
Sbjct: 301 GRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIY---------------AEGLG 345
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N A++ +A+ GH A + GRGV N A +W+ RAA+ G
Sbjct: 346 TPQ----NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVPQNYATAMQWFRRAADKGD 401
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMK 282
A +N + Y+ G+G S QA KW AA+ GH AQ G+ ++ EG+ K
Sbjct: 402 ASAQFNLARLYADGQGGAASPAQAMKWYAAAAEQGHSGAQNRLGV-MYAEGQGAARDYGK 460
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
AV + + A G+ AA + ++ Q +RD A
Sbjct: 461 AVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNA 495
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVPQNYATAMQWFRRA 396
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD +AQ A+ +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGGAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +A +WY RAAE G A YN + Y+ G+G+ + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNARAYFWYNLAA 505
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLK-------------GA--ARGSTLAMV--DAGLMYWEM 150
G+ + HG+GV +N A F K GA A G L +A Y
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAAQWYGRA 144
Query: 151 DKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
++ A++ Y + + D P + A + L +++ GHV AQ++L +G GV
Sbjct: 145 AQQNNAVAQYNLSHLYQDGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNGVAV 204
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N AA W+ +AA+ G+ +A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 205 NYMTAADWFKKAADQGHAQAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A + +A+ H AQY L G G N A +WY +AAE G+ A+ N Y
Sbjct: 317 AAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLY 376
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM-----MKAVVYLELATRA 293
+ G G+P ++ A +W +RAAD G AQ L+ +G+ +A+ + A
Sbjct: 377 AEGRGVPQNYATAMQWFRRAADKGDASAQFNLAR-LYADGQGGAASPAQAMKWYAAAAEQ 435
Query: 294 GETAADHVKNVILQQLSATSRDRAMLV 320
G + A + V+ + +RD V
Sbjct: 436 GHSGAQNRLGVMYAEGQGAARDYGKAV 462
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P NA A + +A+ GH AQ L G+G+ N +EAA+WY RAA+ A Y
Sbjct: 95 PQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAAQWYGRAAQQNNAVAQY 154
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
N S Y G G+P S A +W++++A GH AQ E G
Sbjct: 155 NLSHLYQDGLGVPQSFSTAAQWLEKSAAQGHVTAQFELG 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV ++ A K AA+G A + G Y + G+
Sbjct: 160 YQDGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRY-----------------LKGNGV 202
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A N A +A+ GH +AQ QL L G GV + +AA+W RAAE G RA
Sbjct: 203 A--VNYMTAADWFKKAADQGHAQAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARA 260
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ Y G G+P ++ A W +++A+
Sbjct: 261 QNSLGRMYMDGVGVPRDYKLAASWFQKSAE 290
>gi|251780387|ref|ZP_04823307.1| Sel1 repeat family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084702|gb|EES50592.1| Sel1 repeat family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 269
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK-EAAISLYRQA 163
G ++ G + ++ ++A+ ++K A +G +A + G MY+ +D+ E A + +
Sbjct: 45 GDKYYIGDDITQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAKEYFEYS 104
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N EEA+K +A++ AQY L G+GVD
Sbjct: 105 ASQGNPDAQCNLACMYEEGLGTEINYEEAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDI 164
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ ++A +W+++A+ GY ++ Y G G+ ++++A K+ K+AA
Sbjct: 165 DYKKAFKWHMKASILGYEKSQNTLGYMYEQGLGIEKNYKEAVKYYKKAA 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV ++ +KA + F A++G+ A + MY E E AI Y +A
Sbjct: 81 GDMYYCGNGVDQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTEINYEEAIKWYEKA 140
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ D AQ + ++A K +ASI G+ ++Q L +G G++
Sbjct: 141 ALQEDFYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASILGYEKSQNTLGYMYEQGLGIEK 200
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA ++Y +AA Y A YN + Y G G+ + A W ++AA+ G KA
Sbjct: 201 NYKEAVKYYKKAAYQEYSYAEYNLATMYYLGNGIIQDRKTAYIWYQKAANQGLKKA 256
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+AQ L + G + + +EA +WY+++AE GY A YN Y G G+ + +A+
Sbjct: 39 KAQNALGDKYYIGDDITQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAK 98
Query: 253 KWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 290
++ + +A G+ AQ E GLG TE +A+ + E A
Sbjct: 99 EYFEYSASQGNPDAQCNLACMYEEGLG--TEINYEEAIKWYEKA 140
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G N ++A+ + K A + A + G +Y ++D K+A + +A++
Sbjct: 120 YEEGLGTEINYEEAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKKA-FKWHMKASI 178
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG +Q N +EAVK +A+ + A+Y LA + G G+ +
Sbjct: 179 LGYEKSQNTLGYMYEQGLGIEKNYKEAVKYYKKAAYQEYSYAEYNLATMYYLGNGIIQDR 238
Query: 213 QEAARWYLRAAEGGYVRAM 231
+ A WY +AA G +A+
Sbjct: 239 KTAYIWYQKAANQGLKKAI 257
>gi|406915363|gb|EKD54450.1| hypothetical protein ACD_60C00079G0003 [uncultured bacterium]
Length = 467
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARG---STLAMVDAGLMYWEMDKKEA---AISLYRQAA 164
+++G GV K + A+ ++K +++G + AM A L Y+ + ++ A++LY QAA
Sbjct: 78 YQNGLGVDKKPELAVAWYMKASSQGLPEAQFAM--ATLYYYGVGVEQGLSMAVTLYNQAA 135
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+P AQ N A+ +A+ AG AQY L L + G+GV
Sbjct: 136 KNNNPLAQYMLGYLAANGFGMTQNLNTALDWYSKAAAAGVPEAQYNLGLMYYTGQGVSKE 195
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+A W+ AAE G +A + + YS G +P QA W +AA G +AQ G
Sbjct: 196 DGKAFSWFNLAAEQGLPKAQFMLGVMYSLGRAVPTDKTQAFYWYNKAAQAGLPEAQYNLG 255
Query: 272 LGLFTEG 278
+ L+ G
Sbjct: 256 I-LYYNG 261
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 94/235 (40%), Gaps = 31/235 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G+GV K KA F A +G A G+MY DK + A Y +
Sbjct: 183 GLMYYTGQGVSKEDGKAFSWFNLAAEQGLPKAQFMLGVMYSLGRAVPTDKTQ-AFYWYNK 241
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G P AQ N AV + +A+ RAQY + G GV
Sbjct: 242 AAQAGLPEAQYNLGILYYNGSGTTVNLNSAVSWIKKAADQDDARAQYFWGYLTYNGIGVA 301
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N+Q+A WY +AA G+ A + Y G G+ RQA W AA G AQ
Sbjct: 302 KNIQQAIDWYEKAAGQGFSEAQFALGFLYHNGLGVAKDDRQAFSWYMAAAKQGLANAQ-- 359
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVK---NVILQQLSATSRDR 316
+ +GLF + M KA Y T A E D+ + V+ Q SRD
Sbjct: 360 YMVGLFYQQGMGVISDPKAAAYWY--TEAAEQGMDNAQLLLGVMYSQGQGISRDN 412
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 90 SWND--ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
SW + A + L +A +L G + GR V + +A + K A G A + G++Y
Sbjct: 201 SWFNLAAEQGLPKAQFML--GVMYSLGRAVPTDKTQAFYWYNKAAQAGLPEAQYNLGILY 258
Query: 148 WEMDKK----EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAG 190
+ +A+S ++AA D AQ N ++A+ +A+ G
Sbjct: 259 YNGSGTTVNLNSAVSWIKKAADQDDARAQYFWGYLTYNGIGVAKNIQQAIDWYEKAAGQG 318
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
AQ+ L H G GV + ++A WY+ AA+ G A Y L Y G G+ +
Sbjct: 319 FSEAQFALGFLYHNGLGVAKDDRQAFSWYMAAAKQGLANAQYMVGLFYQQGMGVISDPKA 378
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGET 296
A W AA+ G AQL G+ ++++G+ + A + +LA+ + T
Sbjct: 379 AAYWYTEAAEQGMDNAQLLLGV-MYSQGQGISRDNQAAYAWFDLASTSSNT 428
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E AV +AS G AQ+ +A + G GV+ L A Y +AA+ A Y
Sbjct: 89 ELAVAWYMKASSQGLPEAQFAMATLYYYGVGVEQGLSMAVTLYNQAAKNNNPLAQYMLGY 148
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATR 292
+ G G+ + A W +AA G +AQ GL +T E KA + LA
Sbjct: 149 LAANGFGMTQNLNTALDWYSKAAAAGVPEAQYNLGLMYYTGQGVSKEDGKAFSWFNLAAE 208
Query: 293 AGETAADHVKNVILQQLSATSRDR 316
G A + V+ A D+
Sbjct: 209 QGLPKAQFMLGVMYSLGRAVPTDK 232
>gi|187250846|ref|YP_001875328.1| Sel1 domain-containing protein repeat-containing protein
[Elusimicrobium minutum Pei191]
gi|186971006|gb|ACC97991.1| Sel1 domain protein repeat-containing protein [Elusimicrobium
minutum Pei191]
Length = 464
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
NDALR + G + + RGV+++ AL A G+ AM+D +Y+++
Sbjct: 82 NDALREV---------GFSYLNARGVKRDFRTALKHLTNAADSGNVQAMLDIAALYYDLK 132
Query: 152 KKEAAISLYRQAAVLGDPA-----------AQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
K Y +AA G A A + E+ + L + + G + A QLA
Sbjct: 133 KPREEYEWYEKAAASGAEAGMQILVDRYCYAARKDGEKCLIWLTKLADGGSIEAMKQLAQ 192
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+G L++ WY RAA+ G V AM Y+ G + A KW AA
Sbjct: 193 IYEKGEITAKTLEKTEYWYERAAQAGDVEAMSLVGQAYALGSMHTKDAKLAFKWNLEAAK 252
Query: 261 CGHGKAQL----EHGLGLFTEGEMMKAVVYLELATRAGE 295
G+ KA + G FT +M KAV E T+A E
Sbjct: 253 QGNEKAIFALCSSYIYGQFTSKDMKKAV---EWCTKAAE 288
>gi|403052608|ref|ZP_10907092.1| hypothetical protein AberL1_13916 [Acinetobacter bereziniae LMG
1003]
Length = 282
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 159 LYRQAAVLGD-PAAQP------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L+ AA LGD P+ N +A + +A+ AG+ A+ + G
Sbjct: 117 LFEDAAALGDIPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMYLHG 176
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + +A++WY++AAE G V A YN L Y G+G+ + QA KW AA+ G
Sbjct: 177 HGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYKWFLEAANQGDHN 236
Query: 266 AQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADH 300
AQ G GL + + ++ + E + ++G + A H
Sbjct: 237 AQYHLGKMYLDGLGVDKNLSNSISWFEKSAKSGNSYAAH 275
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G +K G GV++N +A + +LK A G + A + G MY
Sbjct: 130 LNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMY---------------- 173
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+ G +Q + +A + +A+ G V AQY L L G G+ + +A +W+L AA
Sbjct: 174 -LHGHGVSQ--DKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYKWFLEAA 230
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
G A Y+ Y G G+ + + W +++A G+ A E
Sbjct: 231 NQGDHNAQYHLGKMYLDGLGVDKNLSNSISWFEKSAKSGNSYAAHE 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y A +L + + +A KL A+ G + + +L G GV N +A+ +Y
Sbjct: 95 YNLAILLSSDSGIKNDYAQAKKLFEDAAALGDIPSLNELGNFYKDGIGVQENYAQASEYY 154
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
L+AA GY A N Y G G+ +A +W +AA+ G AQ GL F G+
Sbjct: 155 LKAANAGYSAAENNIGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFL-GD 213
Query: 280 MMKAVV------YLELATRAGETAADHVKNVILQQL 309
+K +LE A + A H+ + L L
Sbjct: 214 GIKQDYSQAYKWFLEAANQGDHNAQYHLGKMYLDGL 249
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 190 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + + G + + N+ EA +WY +A+ GY +A YN ++ S G+ +
Sbjct: 52 GDPEAQYNMGVLFTDGYKDLKPNIIEAFKWYKLSADKGYAKAKYNLAILLSSDSGIKNDY 111
Query: 249 RQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA-DHVKN 303
QA+K + AA G + E G G+ + +A Y A AG +AA +++ N
Sbjct: 112 AQAKKLFEDAAALGDIPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGN 171
Query: 304 VILQ 307
+ L
Sbjct: 172 MYLH 175
>gi|418529155|ref|ZP_13095095.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371453581|gb|EHN66593.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 542
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV ++ A F + A + A + G +Y A LG
Sbjct: 301 GRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIY---------------AEGLG 345
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N A++ +A+ GH A + GRGV N A +W+ RAA+ G
Sbjct: 346 TPQ----NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGD 401
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMK 282
A +N + Y+ G+G S QA KW AA+ GH AQ G+ ++ EG+ K
Sbjct: 402 ASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGV-MYAEGQGAARDYGK 460
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
AV + + A G+ AA + ++ Q +RD A
Sbjct: 461 AVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNA 495
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRA 396
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD +AQ A+ +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +A +WY RAAE G A YN + Y+ G+G+ + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNARAYFWYNLAA 505
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + HG+GV +N A F K AA+G A G +Y + YR+AA
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALY---ANGQGLPQNYREAAQWY 141
Query: 168 DPAAQPANAEEAVKL--LYQASIA------------------GHVRAQYQLALCLHRGRG 207
AAQ NA L LYQ + GHV AQ++L +G G
Sbjct: 142 GRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYIKGNG 201
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N AA W+ +AA+ G+ A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 202 VAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
QAA GD AQ P NA A + +A+ GH AQ L G+G+
Sbjct: 71 QAAERGDAKAQNQLGEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGL 130
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +EAA+WY RAA+ A YN S Y G G+P S A +W++++A GH AQ
Sbjct: 131 PQNYREAAQWYGRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQF 190
Query: 269 EHG 271
E G
Sbjct: 191 ELG 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 96/246 (39%), Gaps = 32/246 (13%)
Query: 70 NKIAASFTLPQLRAASL-VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLD 122
N A + L L L V +S++ A + L ++ G+R+ G GV N
Sbjct: 148 NNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYIKGNGVAVNYM 207
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKL 182
A D F K A +G A G M L V DP +A +
Sbjct: 208 TAADWFKKAADQGHAEAQNQLGSM------------LSDGVGVKLDPV-------QAAQW 248
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ G RAQ L G GV + + AA W+ ++AE + Y +G
Sbjct: 249 LQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAEQWNADGQNHLGRLYLYGL 308
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
G+ S A +W +RAAD H AQ G GL T A+ + + A G AA
Sbjct: 309 GVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAA 368
Query: 299 DHVKNV 304
+ NV
Sbjct: 369 --INNV 372
>gi|333985641|ref|YP_004514851.1| Sel1 domain-containing protein repeat-containing protein
[Methylomonas methanica MC09]
gi|333809682|gb|AEG02352.1| Sel1 domain protein repeat-containing protein [Methylomonas
methanica MC09]
Length = 201
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
QPA A E + L + + AG+ AQ+QL +G GV + +A W+ +AAE G+ A
Sbjct: 4 QPAAAAEDINNLIRQAEAGNADAQFQLVKAYGQGIGVSKDSNKAKHWFSKAAENGHAEAE 63
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--------QLEHGLGLFTEGEMMKA 283
Y T Y +G+ + + +A +W +R+A+ G+G A Q+ H LG + KA
Sbjct: 64 YWTGYNYFYGQNIEKNLGKALEWYERSANKGYGPAQFMTGYIYQMGHLLGESIRPNLAKA 123
Query: 284 VVYLELATRAGETAA 298
+ + +LA GE A
Sbjct: 124 INWYQLAVAKGEMGA 138
>gi|299531481|ref|ZP_07044887.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298720444|gb|EFI61395.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 542
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV ++ A F + A + A + G +Y A LG
Sbjct: 301 GRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIY---------------AEGLG 345
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N A++ +A+ GH A + GRGV N A +W+ RAA+ G
Sbjct: 346 TPQ----NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGD 401
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMK 282
A +N + Y+ G+G S QA KW AA+ GH AQ G+ ++ EG+ K
Sbjct: 402 ASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGV-MYAEGQGAARDYGK 460
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
AV + + A G+ AA + ++ Q +RD A
Sbjct: 461 AVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNA 495
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRA 396
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD +AQ A+ +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +A +WY RAAE G A YN + Y+ G+G+ + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVARDNARAYFWYNLAA 505
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + HG+GV +N A F K AA+G A G +Y + YR+AA
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALY---ANGQGLPQNYREAAQWY 141
Query: 168 DPAAQPANAEEAVKL--LYQASIA------------------GHVRAQYQLALCLHRGRG 207
AAQ +NA L LYQ + GHV AQ++L +G G
Sbjct: 142 GRAAQQSNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNG 201
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N AA W+ +AA+ G+ A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 202 VAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
QAA GD AQ P NA A + +A+ GH AQ L G+G+
Sbjct: 71 QAAERGDAKAQNQLGEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGL 130
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +EAA+WY RAA+ A YN S Y G G+P S A +W++++A GH AQ
Sbjct: 131 PQNYREAAQWYGRAAQQSNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQF 190
Query: 269 EHG 271
E G
Sbjct: 191 ELG 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G GV N A D F K A +G A G M L V
Sbjct: 193 GQRYLKGNGVAVNYMTAADWFKKAADQGHAEAQNQLGSM------------LSDGVGVKL 240
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP +A + L +A+ G RAQ L G GV + + AA W+ ++AE
Sbjct: 241 DPV-------QAAQWLQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAEQWN 293
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 283
+ Y +G G+ S A +W +RAAD H AQ G GL T A
Sbjct: 294 ADGQNHLGRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTA 353
Query: 284 VVYLELATRAGETAADHVKNV 304
+ + + A G AA + NV
Sbjct: 354 LQWYQKAAEQGHAAA--INNV 372
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G GV ++ A K AA+G A + G Y + G+
Sbjct: 160 YQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRY-----------------LKGNGV 202
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A N A +A+ GH AQ QL L G GV + +AA+W RAAE G RA
Sbjct: 203 A--VNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARA 260
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ Y G G+P ++ A W +++A+
Sbjct: 261 QNSLGRMYMDGVGVPRDYKLAASWFQKSAE 290
>gi|156975097|ref|YP_001446004.1| hypothetical protein VIBHAR_02823 [Vibrio harveyi ATCC BAA-1116]
gi|156526691|gb|ABU71777.1| hypothetical protein VIBHAR_02823 [Vibrio harveyi ATCC BAA-1116]
Length = 256
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A +L G + +G+GV ++ ++A+ F K A +G ++ G +Y+
Sbjct: 2 AEQGLPKAQYIL--GLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGV 59
Query: 150 -MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQ 195
D K+A + YR+AA G AQ + ++AV L++A+ G AQ
Sbjct: 60 TQDDKQA-VYWYRKAAEQGLARAQSNLGVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQ 118
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L G+ + ++A WY +AAE G RA N L Y G+GL +QA W
Sbjct: 119 HNLGFMNQNGQ----DYKQAVYWYRKAAEQGLARAQSNLGLMYLHGQGLIQDDKQAVYWF 174
Query: 256 KRAADCGHGKAQLEHGLGL-FTEGEMM-----KAVVYLELATRAG 294
++AA G AQ H LGL + G+ + +A ++L LA G
Sbjct: 175 RKAAKQGFAIAQ--HNLGLVYLNGKGVTQDNAQAYMWLSLARHNG 217
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+AQY L L G+GV + +A W+ +AA G V + Y Y G+G+ +QA
Sbjct: 8 KAQYILGLMYLNGQGVIQDDNQAIYWFRKAAGQGGVMSQYYLGFIYFNGQGVTQDDKQAV 67
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADH 300
W ++AA+ G +AQ G+ +++ G + +AV +L A G+ A H
Sbjct: 68 YWYRKAAEQGLARAQSNLGV-MYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQH 119
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ +A+ K A +G +A + G M + A+ YR+AA G
Sbjct: 86 GVMYSHGRGVAQDEKQAVYWLHKAAEQGDAIAQHNLGFMNQNGQDYKQAVYWYRKAAEQG 145
Query: 168 DPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
AQ + ++AV +A+ G AQ+ L L G+GV + +
Sbjct: 146 LARAQSNLGLMYLHGQGLIQDDKQAVYWFRKAAKQGFAIAQHNLGLVYLNGKGVTQDNAQ 205
Query: 215 AARWYLRAAEGGY--VRAMYNT 234
A W A G+ + +NT
Sbjct: 206 AYMWLSLARHNGFKNTKENFNT 227
>gi|449128595|ref|ZP_21764841.1| hypothetical protein HMPREF9733_02244 [Treponema denticola SP33]
gi|448941003|gb|EMB21907.1| hypothetical protein HMPREF9733_02244 [Treponema denticola SP33]
Length = 544
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K G GV +N +A+ + K A +G A + G MY E+A+ YR+A
Sbjct: 130 GFMYKEGLGVEQNYKQAVYWYSKAAEQGLYEAQNNLGFMYKTGRGIEQSYESAVYWYRKA 189
Query: 164 AV---------LG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A LG D N E+A + ++A+ G +AQ +L H G GV+
Sbjct: 190 AEKDLAEAQFNLGNMYFDGLGLAKNHEQAAEWYFKAAEQGLAKAQNKLGWMYHNGIGVEQ 249
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N ++A W+ +AAE G ++ Y G G+ +++A +W +AAD G +AQ
Sbjct: 250 NDEKAVYWHRKAAEQGDAEGQFSLGWLYYQGIGVKKDYKKASEWFGKAADQGLTEAQ 306
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F G+GV ++ +A+ + K A +G A + G MY E G
Sbjct: 97 FAEGKGVEQSYKQAVYWYKKSAEQGHAWAQNNLGFMYKE-----------------GLGV 139
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q N ++AV +A+ G AQ L GRG++ + + A WY +AAE A
Sbjct: 140 EQ--NYKQAVYWYSKAAEQGLYEAQNNLGFMYKTGRGIEQSYESAVYWYRKAAEKDLAEA 197
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
+N Y G GL +H QA +W +AA+ G KAQ + G G+ E KAV +
Sbjct: 198 QFNLGNMYFDGLGLAKNHEQAAEWYFKAAEQGLAKAQNKLGWMYHNGIGVEQNDEKAVYW 257
Query: 287 LELATRAGE 295
A G+
Sbjct: 258 HRKAAEQGD 266
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 157 ISLYRQAAVLGDPA--AQPANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
I ++ AV P P +AEE +++L + + G +Q +LA + G+GV +
Sbjct: 12 IKVFMMTAVCMLPLLFVSPLHAEETDEIRILQKEAEKGLAESQNKLAGLYYEGKGVTQSY 71
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ AA WY +AA+ G++ A N + ++ G+G+ S++QA W K++A+ GH AQ G
Sbjct: 72 ETAAYWYRKAAKQGHILAQNNLADMFAEGKGVEQSYKQAVYWYKKSAEQGHAWAQNNLGF 131
Query: 273 ----GLFTEGEMMKAVVYLELATRAG 294
GL E +AV + A G
Sbjct: 132 MYKEGLGVEQNYKQAVYWYSKAAEQG 157
>gi|295112080|emb|CBL28830.1| FOG: TPR repeat, SEL1 subfamily [Synergistetes bacterium SGP1]
Length = 846
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G GV+++ KA++ + K +G A + GLMY + D +AA LYR+
Sbjct: 693 GVLYYGGEGVKQDYGKAVEWYCKAVEQGLASAEFNLGLMYEQGCGVARDYAKAA-ELYRR 751
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA GD AAQ L +G GV N EA +WY +A
Sbjct: 752 AAEQGDAAAQ-----------------------CNLGFFYSKGWGVKQNNIEAEKWYHKA 788
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
AE G A N L Y G+G+ +H +A KW ++AA G+ AQ
Sbjct: 789 AEQGDATAQCNLGLMYEKGKGVEQNHEEAIKWYRKAARLGNPDAQ 833
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV K+ KA + F RG + G++Y+ G
Sbjct: 657 GLMYANGNGVGKDYAKAAECFRIAGERGDAWGQYNLGVLYYG-----------------G 699
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ Q + +AV+ +A G A++ L L +G GV + +AA Y RAAE G
Sbjct: 700 EGVKQ--DYGKAVEWYCKAVEQGLASAEFNLGLMYEQGCGVARDYAKAAELYRRAAEQGD 757
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A N YS G G+ ++ +A KW +AA+ G AQ GL
Sbjct: 758 AAAQCNLGFFYSKGWGVKQNNIEAEKWYHKAAEQGDATAQCNLGL 802
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G A +L L H G GV N ++AA W+ RA EGG A L Y+ G G+
Sbjct: 607 KAANEGDAEAARKLGLLYHEGDGVRRNYKQAAEWFRRAMEGGDASAPRYLGLMYANGNGV 666
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
+ +A + + A + G Q G+ L+ GE + KAV + A G +A+
Sbjct: 667 GKDYAKAAECFRIAGERGDAWGQYNLGV-LYYGGEGVKQDYGKAVEWYCKAVEQGLASAE 725
Query: 300 HVKNVILQQLSATSRDRA 317
++ +Q +RD A
Sbjct: 726 FNLGLMYEQGCGVARDYA 743
>gi|290970124|ref|XP_002668039.1| predicted protein [Naegleria gruberi]
gi|284081105|gb|EFC35295.1| predicted protein [Naegleria gruberi]
Length = 296
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
L G R+K+G G+ ++ +KA + K + A G++Y + + A +
Sbjct: 40 LHLGLRYKNGEGIEQSNEKAFEWIEKAVEQDYAQAQNHLGILYLKGKGIYQSYDKACECF 99
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++AA + AQ + E+A + +++ H++AQ +L + + G+G
Sbjct: 100 QKAANQNNKCAQYNLGLRYKNGQGIEQSYEKAFEFFQKSANQDHIQAQTELGIMFYHGQG 159
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V+ +L++A W+ ++A GY +A L Y+ G G+ LS+ +A +W +++A G +AQ
Sbjct: 160 VEQSLEKAFEWFEKSAVQGYAQAQSYLGLLYAKGHGIKLSYEKACEWCQKSAIQGIPEAQ 219
Query: 268 LEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
G L+ G+ + A ++E+A G T A
Sbjct: 220 FLLG-NLYYCGKGVAKSKENAFYWMEMAAVKGYTQAQ 255
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+K+G+G+ ++ +KA + F K A + A + G+M++ E ++
Sbjct: 115 GLRYKNGQGIEQSYEKAFEFFQKSANQDHIQAQTELGIMFYHGQGVEQSL---------- 164
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
E+A + ++++ G+ +AQ L L +G G+ + ++A W ++A G
Sbjct: 165 ---------EKAFEWFEKSAVQGYAQAQSYLGLLYAKGHGIKLSYEKACEWCQKSAIQGI 215
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV-Y 286
A + Y G+G+ S A WM+ AA G+ +AQ G E M KA+ Y
Sbjct: 216 PEAQFLLGNLYYCGKGVAKSKENAFYWMEMAAVKGYTQAQFMLGRMYERENLMEKALDWY 275
Query: 287 LELATRAGETAADHV 301
L+ A + + A V
Sbjct: 276 LKAANQLSKDAQQAV 290
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + E++++LLY+++ G V +Q L L G G++ + ++A W +A E Y +A
Sbjct: 17 PISNEKSLQLLYESASHGFVHSQLHLGLRYKNGEGIEQSNEKAFEWIEKAVEQDYAQAQN 76
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ + Y G+G+ S+ +A + ++AA+ + AQ GL
Sbjct: 77 HLGILYLKGKGIYQSYDKACECFQKAANQNNKCAQYNLGL 116
>gi|423012857|ref|ZP_17003578.1| Sel1 domain-containing protein [Achromobacter xylosoxidans AXX-A]
gi|338784186|gb|EGP48529.1| Sel1 domain-containing protein [Achromobacter xylosoxidans AXX-A]
Length = 264
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A + L +A+ GH AQ L GRGV + +AARWY RAAE G A YN + Y
Sbjct: 64 ASQWLRKAADQGHAPAQDALGTLYQLGRGVPKDELQAARWYRRAAEQGLDTAQYNLARQY 123
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
FG G+P AR+W ++AAD G+ +AQ
Sbjct: 124 DFGRGVPRDLAAAREWYEKAADQGYPRAQ 152
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + +A + +A+ G AQY LA GRGV +L A WY +AA+ GY RA Y
Sbjct: 94 PKDELQAARWYRRAAEQGLDTAQYNLARQYDFGRGVPRDLAAAREWYEKAADQGYPRAQY 153
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
N ++ Y+ G+G+ +A + M+ AA GH +A G+ ++ EG
Sbjct: 154 NLAVMYANGDGVIQDDARAMQLMRLAAAQGHRQATFSLGV-MYAEG 198
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
AE G+ +A Y L Y+ G G+P A +W+++AAD GH AQ
Sbjct: 36 AEAGHAKAQYGLGLMYANGSGVPQDDLLASQWLRKAADQGHAPAQ 80
>gi|387607381|ref|YP_006096237.1| putative chaperone protein [Escherichia coli 042]
gi|432770725|ref|ZP_20005069.1| hypothetical protein A1S9_03523 [Escherichia coli KTE50]
gi|432961779|ref|ZP_20151569.1| hypothetical protein A15E_02487 [Escherichia coli KTE202]
gi|433063153|ref|ZP_20250086.1| hypothetical protein WIO_01973 [Escherichia coli KTE125]
gi|284921681|emb|CBG34753.1| putative chaperone protein [Escherichia coli 042]
gi|431315925|gb|ELG03824.1| hypothetical protein A1S9_03523 [Escherichia coli KTE50]
gi|431474735|gb|ELH54541.1| hypothetical protein A15E_02487 [Escherichia coli KTE202]
gi|431582987|gb|ELI54997.1| hypothetical protein WIO_01973 [Escherichia coli KTE125]
Length = 647
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 20/192 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ----A 163
GK + G V ++L A + F + A A G+MY + + IS R+ A
Sbjct: 331 GKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDAQYALGIMYRDGRGTDKNISEARKWFLLA 390
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ +AQ N EEA++ A+ GH RAQY L G GV
Sbjct: 391 AKNGNASAQYEIARISRFAVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVAR 450
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH---GKAQ 267
+ +A RW L++AE GY+ A Y+T+ YS E + +A W + A G G+A
Sbjct: 451 DKVQAHRWLLQSAEQGYLYAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAM 510
Query: 268 LEHGLGLFTEGE 279
E G T +
Sbjct: 511 YELGKYYLTNND 522
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 98/239 (41%), Gaps = 57/239 (23%)
Query: 66 FD--VLNKIAASFTLPQLRAASLVCK---SWNDALRPLREAMVLLRW--GKRF-----KH 113
FD VLNK+A F L A L+ + SW R+ ++ +W +RF +H
Sbjct: 237 FDIAVLNKVAG-FELSDNYMALLIERLSYSW-------RKEKMIRKWKLTERFNNLAMQH 288
Query: 114 GRGVRKNLD------------KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR 161
G +K L+ S L A +G +LA G MY+E D+ + L
Sbjct: 289 HSGYKKLLNAIKLKGLFYYPSSVFQSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKL-- 346
Query: 162 QAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
A +A+ + AQY L + GRG D N+ EA +W+L
Sbjct: 347 -----------------AFNWFTRAAQHNVIDAQYALGIMYRDGRGTDKNISEARKWFLL 389
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 274
AA+ G A Y + F ++ +A +W AA GH +AQ + HG+G+
Sbjct: 390 AAKNGNASAQYEIARISRFAVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGV 448
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 94 ALRPLREAMVLLRW----------------GKRFKHGRGVRKNLDKALDSFLKGAARGST 137
A+ PLR LRW G+ + HG GV ++ +A L+ A +G
Sbjct: 409 AVEPLRNYEEALRWYLSAATQGHERAQYDLGQMYIHGIGVARDKVQAHRWLLQSAEQGYL 468
Query: 138 LAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAA----------------QPANAE 177
A +Y E + +E A+ + + A G A P N
Sbjct: 469 YAQYHTARLYSESESILQDQEKALYWFTKVAKNGTDGAGEAMYELGKYYLTNNDDPENNA 528
Query: 178 EAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA++ + A+ G + A + LA + L+ + + A WY +AA G A + T+
Sbjct: 529 EAIQWITGAAQRGQIEAIFLLAEMYLYGTKDTIKDENHALHWYEKAARLGSTEAQHQTAA 588
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
Y+ G G + ++QA W+ A +
Sbjct: 589 MYAQGTGTKIDNKQAWMWLTIAGN 612
>gi|418054797|ref|ZP_12692853.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
gi|353212422|gb|EHB77822.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
Length = 879
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+ A L + P N +EA K +A+ G V+AQY+L RG G+ + A WY
Sbjct: 682 FEVGARLAEGKGTPQNFKEAAKWYQRAADHGLVQAQYRLGTFYERGLGMKADRALAETWY 741
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLG 273
RAA+ G V+AM+N ++ + + A +W ++AA G +Q E+GLG
Sbjct: 742 KRAADKGNVKAMHNLAVLSANQTDQSPDYTTAAQWFEQAAQRGLADSQFNLAILYENGLG 801
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
+ + ++ +A +++ LA R + A + ++ +L+A A ++ WR +P
Sbjct: 802 V--KKDLQQAYMWISLAARDKDADAVRRQGILRGKLTAEDLAEAERMISEWRPIP 854
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G A++++ L G+G N +EAA+WY RAA+ G V+A Y Y G G+
Sbjct: 672 AAANGDASAEFEVGARLAEGKGTPQNFKEAAKWYQRAADHGLVQAQYRLGTFYERGLGMK 731
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY 286
A W KRAAD G+ KA H L + + + ++ Y
Sbjct: 732 ADRALAETWYKRAADKGNVKAM--HNLAVLSANQTDQSPDY 770
>gi|302875612|ref|YP_003844245.1| Sel1 domain-containing protein repeat-containing protein
[Clostridium cellulovorans 743B]
gi|302578469|gb|ADL52481.1| Sel1 domain protein repeat-containing protein [Clostridium
cellulovorans 743B]
Length = 553
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAA------ 156
G + G+GV N AL+ F K A Y D KEA
Sbjct: 354 GDMYYRGKGVEINTLTALEYFKKAVDENYGEAAFKVATFYLNGKNVSKDNKEAMKWLIKA 413
Query: 157 ------ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
++ Y+ A++ N +EA K Y A+ G +++ +++A ++GRGV+
Sbjct: 414 HELRQNVATYKIASMYFSGIGVEKNLKEAFKWFYIAAERGDIKSAFKVAFMYYKGRGVER 473
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ EA +WY AA+ V A+Y Y G+G+ ++ +A ++ K+AA G +A+
Sbjct: 474 DYDEALKWYKVAADNNNVDALYWLGEIYYIGKGIQKNNERAMRYFKKAAALGDTRAK 530
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLY 160
++ G + +G+GV N ++AL + K + G + G MY+ E A+ +
Sbjct: 315 VQLGDMYYNGQGVVCNYEEALKYYKKASESGHGRSSYVVGDMYYRGKGVEINTLTALEYF 374
Query: 161 RQAA--VLGDPAAQPA-----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++A G+ A + A + +EA+K L +A A Y++A G G
Sbjct: 375 KKAVDENYGEAAFKVATFYLNGKNVSKDNKEAMKWLIKAHELRQNVATYKIASMYFSGIG 434
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V+ NL+EA +W+ AAE G +++ + + Y G G+ + +A KW K AAD + A
Sbjct: 435 VEKNLKEAFKWFYIAAERGDIKSAFKVAFMYYKGRGVERDYDEALKWYKVAADNNNVDAL 494
Query: 268 LEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
G +G + +A+ Y + A G+T A KN I Q
Sbjct: 495 YWLGEIYYIGKGIQKNNERAMRYFKKAAALGDTRA---KNKIAQ 535
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+GD + +E + L + AG V ++ QL + G+GV N +EA ++Y +A+E
Sbjct: 285 IGDIKPGHKDDKETLVELKAKAEAGDVISRVQLGDMYYNGQGVVCNYEEALKYYKKASES 344
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
G+ R+ Y Y G+G+ ++ A ++ K+A D +G+A
Sbjct: 345 GHGRSSYVVGDMYYRGKGVEINTLTALEYFKKAVDENYGEA 385
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
LR+ + + + G GV KNL +A F A RG + MY
Sbjct: 415 ELRQNVATYKIASMYFSGIGVEKNLKEAFKWFYIAAERGDIKSAFKVAFMY--------- 465
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
Y+ V D +EA+K A+ +V A Y L + G+G+ N + A
Sbjct: 466 ---YKGRGVERD-------YDEALKWYKVAADNNNVDALYWLGEIYYIGKGIQKNNERAM 515
Query: 217 RWYLRAAEGGYVRA 230
R++ +AA G RA
Sbjct: 516 RYFKKAAALGDTRA 529
>gi|401406890|ref|XP_003882894.1| putative Sel1 repeat domain-containing protein [Neospora caninum
Liverpool]
gi|325117310|emb|CBZ52862.1| putative Sel1 repeat domain-containing protein [Neospora caninum
Liverpool]
Length = 386
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 80 QLRAASLVCKSW-----NDA-LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAA 133
++ AA L CK+ DA L A L G + + G GV NL +A + + +
Sbjct: 10 EVAAARLECKTLRRELSKDADLENKERAAQLCTEGHKNRFGHGVPANLLRAFQLYTEAGS 69
Query: 134 RGSTLAMVDAGLMYWE--------MDKKEAAISLYRQAAVLGDPAAQPA----------- 174
G A+ AG++ E D ++L +AA LG AQ A
Sbjct: 70 LGDPDALTCAGILLEEGLVDPDIDYDNVVKDLNLLGRAAKLGHADAQVAVGYACEQGRSG 129
Query: 175 ---NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
+ ++A+ +A+ G A LA + GRG + ++AA + +AA GG A+
Sbjct: 130 WMQDHQQAIFWYTKAAEQGSATATNNLASLFYHGRGCQQDFEKAAELFKKAAAGGNTNAV 189
Query: 232 YNTSLCYSFGEGLPLSHR-QARKWMKRAADCGHGKAQLEHGLGLF 275
YN +CY FG G+ +A + +RAA GH KA GL LF
Sbjct: 190 YNLGVCYEFGRGVAAEDSDKALQLYQRAAQAGHVKAACALGLLLF 234
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 24/154 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
F HGRG +++ +KA + F K AA G+T A+ + G+ Y E + AA
Sbjct: 160 FYHGRGCQQDFEKAAELFKKAAAGGNTNAVYNLGVCY-EFGRGVAA-------------- 204
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHR-----GRGVDFNLQEAARWYLRAAEG 225
++++A++L +A+ AGHV+A L L L + G+ VD + AA+W AAE
Sbjct: 205 ---EDSDKALQLYQRAAQAGHVKAACALGLLLFKLNVAAGKPVDAYIG-AAKWLRVAAEH 260
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
V A + + G G+ ++QA ++ + AA
Sbjct: 261 KDVEACFGLGQLFEAGLGVSKDYQQALEYYRTAA 294
>gi|303282571|ref|XP_003060577.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458048|gb|EEH55346.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 162
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + G GV +N+D AL+ + K A +G A + G+++ E + E
Sbjct: 22 GQFYSDGHGVEQNIDTALEWYTKSAEKGYAPAQHNMGVIHHEKGQHE------------- 68
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
EA K + +A+ G ++A+Y + G GV+ N+ EA +WY +AAE G+
Sbjct: 69 ----------EAFKWVMKAAAQGCIQAEYIIGQLYAHGEGVEKNIPEAVKWYTKAAEQGH 118
Query: 228 VRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
A N S+ + G+ H +A KW K+AA+ G A E LG E
Sbjct: 119 AGAHNNVGSIHHEKGQ-----HEEAVKWFKKAAN--QGDANGEANLGFCYE 162
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
ALD + +GA G + G Y D N + A++
Sbjct: 2 ALDWYHRGARHGCGGCEYNIGQFY-------------------SDGHGVEQNIDTALEWY 42
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+++ G+ AQ+ + + +H +G +EA +W ++AA G ++A Y Y+ GEG
Sbjct: 43 TKSAEKGYAPAQHNMGV-IHHEKG---QHEEAFKWVMKAAAQGCIQAEYIIGQLYAHGEG 98
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
+ + +A KW +AA+ GH A G +G+ +AV + + A G+ +
Sbjct: 99 VEKNIPEAVKWYTKAAEQGHAGAHNNVGSIHHEKGQHEEAVKWFKKAANQGDANGE 154
>gi|365920829|ref|ZP_09445138.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364577292|gb|EHM54573.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 364
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA------- 163
+ +G GV ++ D+A + K AA+G + G++Y DK + Y QA
Sbjct: 108 YANGWGVAQDYDQARAWWGKAAAQGHVNGQYNLGVLY---DKGKGVTQDYGQARAWYEKA 164
Query: 164 ------------AVLGDPA-AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
VL D + +A +A++ G AQ+ L L G+GV
Sbjct: 165 AAQDDAQAQYNLGVLYDEGKGVTHDYTQAAAWYEKAAVQGDAAAQFNLGLLYDEGKGVTQ 224
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA WY +AA G V+A YN + Y G+G+ + +AR+W ++AA AQ
Sbjct: 225 DYTQAAAWYEKAAVQGLVQAQYNLGVLYRDGQGVAQDYGKARRWFEKAAAQNFAPAQFNL 284
Query: 271 GLGLFTEGE 279
G+ L+ +G+
Sbjct: 285 GV-LYRDGQ 292
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GV + +A + K A +G A + GL+Y D+ + Y QAA
Sbjct: 177 GVLYDEGKGVTHDYTQAAAWYEKAAVQGDAAAQFNLGLLY---DEGKGVTQDYTQAAAWY 233
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AA + G V+AQY L + G+GV + +A RW+ +AA +
Sbjct: 234 EKAA----------------VQGLVQAQYNLGVLYRDGQGVAQDYGKARRWFEKAAAQNF 277
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
A +N + Y G+G+ + QAR W ++AA
Sbjct: 278 APAQFNLGVLYRDGQGVAQDYTQARAWFEKAA 309
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
++AG AQ++L ++G+ V + +AA W+++AA A YN + Y+ G G+
Sbjct: 57 AVAGDAAAQFELGALYYQGQDVAQDYAQAAAWWVKAAAQDDANAQYNLGILYANGWGVAQ 116
Query: 247 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ QAR W +AA GH Q G+ L+ +G+
Sbjct: 117 DYDQARAWWGKAAAQGHVNGQYNLGV-LYDKGK 148
>gi|307690143|ref|ZP_07632589.1| Sel1 domain-containing protein repeat-containing protein
[Clostridium cellulovorans 743B]
Length = 550
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAA------ 156
G + G+GV N AL+ F K A Y D KEA
Sbjct: 351 GDMYYRGKGVEINTLTALEYFKKAVDENYGEAAFKVATFYLNGKNVSKDNKEAMKWLIKA 410
Query: 157 ------ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
++ Y+ A++ N +EA K Y A+ G +++ +++A ++GRGV+
Sbjct: 411 HELRQNVATYKIASMYFSGIGVEKNLKEAFKWFYIAAERGDIKSAFKVAFMYYKGRGVER 470
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ EA +WY AA+ V A+Y Y G+G+ ++ +A ++ K+AA G +A+
Sbjct: 471 DYDEALKWYKVAADNNNVDALYWLGEIYYIGKGIQKNNERAMRYFKKAAALGDTRAK 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLY 160
++ G + +G+GV N ++AL + K + G + G MY+ E A+ +
Sbjct: 312 VQLGDMYYNGQGVVCNYEEALKYYKKASESGHGRSSYVVGDMYYRGKGVEINTLTALEYF 371
Query: 161 RQAA--VLGDPAAQPA-----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++A G+ A + A + +EA+K L +A A Y++A G G
Sbjct: 372 KKAVDENYGEAAFKVATFYLNGKNVSKDNKEAMKWLIKAHELRQNVATYKIASMYFSGIG 431
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V+ NL+EA +W+ AAE G +++ + + Y G G+ + +A KW K AAD + A
Sbjct: 432 VEKNLKEAFKWFYIAAERGDIKSAFKVAFMYYKGRGVERDYDEALKWYKVAADNNNVDAL 491
Query: 268 LEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQ 307
G +G + +A+ Y + A G+T A KN I Q
Sbjct: 492 YWLGEIYYIGKGIQKNNERAMRYFKKAAALGDTRA---KNKIAQ 532
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+GD + +E + L + AG V ++ QL + G+GV N +EA ++Y +A+E
Sbjct: 282 IGDIKPGHKDDKETLVELKAKAEAGDVISRVQLGDMYYNGQGVVCNYEEALKYYKKASES 341
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
G+ R+ Y Y G+G+ ++ A ++ K+A D +G+A
Sbjct: 342 GHGRSSYVVGDMYYRGKGVEINTLTALEYFKKAVDENYGEA 382
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
LR+ + + + G GV KNL +A F A RG + MY
Sbjct: 412 ELRQNVATYKIASMYFSGIGVEKNLKEAFKWFYIAAERGDIKSAFKVAFMY--------- 462
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
Y+ V D +EA+K A+ +V A Y L + G+G+ N + A
Sbjct: 463 ---YKGRGVERD-------YDEALKWYKVAADNNNVDALYWLGEIYYIGKGIQKNNERAM 512
Query: 217 RWYLRAAEGGYVRA 230
R++ +AA G RA
Sbjct: 513 RYFKKAAALGDTRA 526
>gi|255691613|ref|ZP_05415288.1| TPR repeat protein [Bacteroides finegoldii DSM 17565]
gi|260622681|gb|EEX45552.1| Sel1 repeat protein [Bacteroides finegoldii DSM 17565]
Length = 553
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 60 DFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRK 119
D L V +A+F QL A + ++DA L G ++ G V +
Sbjct: 25 DCYRLGLGVEQDYSAAFKWYQLSAE----QGYSDAQFCL---------GTLYEEGLDVEQ 71
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVLGDPAAQ--- 172
NL+ A+D + K A +G+ A G Y AA Y+ +A GD AQ
Sbjct: 72 NLELAVDWYRKSAEQGNAEAQYLLGDCYRVGLGVEQNYSAAFKWYQLSAEQGDLDAQYYL 131
Query: 173 ----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
N E AV +++ G+ AQ L C G+GVD + A +WY +
Sbjct: 132 GLLYGEGAGVEQNLELAVDWCRKSAEQGNAEAQCSLGDCYRSGQGVDQDYSAAFKWYQLS 191
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----EHGLGLFTEG 278
AE GY A Y L Y G G+ + A W +++A+ G+ AQ +GLG E
Sbjct: 192 AEQGYSDAQYCLGLLYGEGAGVERNSELAVDWYRKSAEQGNADAQCLLGACYGLGDGVEQ 251
Query: 279 EMMKAVVYLELATRAGETAA 298
+ A + +L+ G + A
Sbjct: 252 DDFMAFRWYQLSAEQGNSVA 271
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ +++ + A +G+++A G +Y E E A+ YR++
Sbjct: 348 GDYYRLGQGVEQDYSESIKWYQLSAEQGNSIAQYCLGFLYREGVGVEQNLELAVDWYRKS 407
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ N E+ K ++ G+ AQ L + G GV+
Sbjct: 408 ADQGNADAQCCLGDCYRLGQGVEQNYSESFKWYQLSARQGNSVAQLYLGVLYDEGVGVEQ 467
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
NL+ A WY R+A+ G A CY G+G+ + A KW + +A+ + AQL
Sbjct: 468 NLELAVDWYRRSADQGNAGAQCCLGDCYRLGQGVEQDYSVAFKWYRLSAEQDYSDAQLRL 527
Query: 271 GLGLFTEG 278
G+ L+ EG
Sbjct: 528 GV-LYAEG 534
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G GV ++ A + A +G A GL+Y E E A+ R++
Sbjct: 276 GDYYRLGDGVDQDYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLELAVDWCRKS 335
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ A + E++K ++ G+ AQY L G GV+
Sbjct: 336 AEQGNADAQCALGDYYRLGQGVEQDYSESIKWYQLSAEQGNSIAQYCLGFLYREGVGVEQ 395
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
NL+ A WY ++A+ G A CY G+G+ ++ ++ KW + +A G+ AQL
Sbjct: 396 NLELAVDWYRKSADQGNADAQCCLGDCYRLGQGVEQNYSESFKWYQLSARQGNSVAQLYL 455
Query: 271 GLGLFTEG 278
G+ L+ EG
Sbjct: 456 GV-LYDEG 462
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 23/242 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA LL G ++ G GV +N A + A +G A GL+Y E E
Sbjct: 90 EAQYLL--GDCYRVGLGVEQNYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLEL 147
Query: 156 AISLYRQAAVLGDPAAQPANAE-----EAVKLLYQASI--------AGHVRAQYQLALCL 202
A+ R++A G+ AQ + + + V Y A+ G+ AQY L L
Sbjct: 148 AVDWCRKSAEQGNAEAQCSLGDCYRSGQGVDQDYSAAFKWYQLSAEQGYSDAQYCLGLLY 207
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV+ N + A WY ++AE G A CY G+G+ A +W + +A+ G
Sbjct: 208 GEGAGVERNSELAVDWYRKSAEQGNADAQCLLGACYGLGDGVEQDDFMAFRWYQLSAEQG 267
Query: 263 HGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
+ AQ G LG + + A + +L+ G+ A + ++ + + ++ +
Sbjct: 268 NSVAQCCLGDYYRLGDGVDQDYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLEL 327
Query: 319 LV 320
V
Sbjct: 328 AV 329
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 22/239 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G ++ G+GV ++ A + A +G + A GL+Y E E A+ YR++
Sbjct: 168 GDCYRSGQGVDQDYSAAFKWYQLSAEQGYSDAQYCLGLLYGEGAGVERNSELAVDWYRKS 227
Query: 164 AVLGDPAAQP--------ANAEEAVKLL----YQASIA-GHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + E + YQ S G+ AQ L G GVD
Sbjct: 228 AEQGNADAQCLLGACYGLGDGVEQDDFMAFRWYQLSAEQGNSVAQCCLGDYYRLGDGVDQ 287
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A +WY +AE G + A Y L Y G G+ + A W +++A+ G+ AQ
Sbjct: 288 DYSAAFKWYQLSAEQGDLDAQYYLGLLYGEGAGVEQNLELAVDWCRKSAEQGNADAQCAL 347
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
G LG E + +++ + +L+ G + A + + ++ ++ L VD +R
Sbjct: 348 GDYYRLGQGVEQDYSESIKWYQLSAEQGNSIAQYCLGFLYREGVGVEQNLE-LAVDWYR 405
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 19/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G ++ G GV +NL+ A+D + K A +G+ A G Y E + E+ Y+
Sbjct: 384 GFLYREGVGVEQNLELAVDWYRKSADQGNADAQCCLGDCYRLGQGVEQNYSES-FKWYQL 442
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G+ AQ N E AV +++ G+ AQ L C G+GV+
Sbjct: 443 SARQGNSVAQLYLGVLYDEGVGVEQNLELAVDWYRRSADQGNAGAQCCLGDCYRLGQGVE 502
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ A +WY +AE Y A + Y+ G G+ + A W +++A+
Sbjct: 503 QDYSVAFKWYRLSAEQDYSDAQLRLGVLYAEGLGVEQNLELAADWYRKSAE 553
>gi|440794803|gb|ELR15953.1| tetratricopeptide repeat domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 511
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPA 170
GV K++ KA +L A + + A G+ Y + D K+A + Y++AA GDP
Sbjct: 213 GVEKDMFKAFAYYLLAARKSDSKAQFKVGVFYSKGYAVHQDYKKA-MKWYKRAAQQGDPD 271
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A+ +AV +A + GH A+ L C H GRGV +L A +
Sbjct: 272 AQCNLGWMYASGQGTEADDAQAVFWYQKAVVKGHAVAECNLGNCYHDGRGVAKDLAVAFK 331
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
WY +A+ G + Y G+G+ +A +W +A+ GH AQ + G
Sbjct: 332 WYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKASAQGHAAAQCDLG 385
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + GRGV K+L A + A +G+ + G Y+ D E A + +A
Sbjct: 313 GNCYHDGRGVAKDLAVAFKWYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKA 372
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ G AAQ P ++ +AV+L QA+ G+ AQ L + G V
Sbjct: 373 SAQGHAAAQCDLGWAYDNGRGVPKDSAKAVELYLQAAAQGNFFAQNNLGIVFKNGMAVPM 432
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+L +A W+++AAE Y + Y Y G + H +A +W ++AA+
Sbjct: 433 DLAQAFEWFMKAAEQDYANSQYWVGYFYDHGWVVEKDHVKAAEWYEKAAE 482
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
HVR+ Y + GRGV+ + ++A W+ +AAE G +A +N ++ + GEG
Sbjct: 124 HVRSIYAIGSLYDGGRGVERDHKQAFFWFNKAAEHGDPKAQFNIAVMHEDGEGAERDPAL 183
Query: 251 ARKWMKRAADCGHGKAQLEHG-----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
A KW ++A+ G+ + E G E +M KA Y LA R ++ A V
Sbjct: 184 ALKWYTKSAESGYKRPCYELGRIYENAECGVEKDMFKAFAYYLLAARKSDSKAQFKVGVF 243
Query: 306 LQQLSATSRD 315
+ A +D
Sbjct: 244 YSKGYAVHQD 253
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
V W ++ A+ + G + +G GV K+ KA + + K +A+G A D G
Sbjct: 328 VAFKWYESSAQKGNAVGQHKLGWAYFNGDGVEKDESKAGEWWHKASAQGHAAAQCDLG-- 385
Query: 147 YWEMDKKEA-------AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQA 186
W D A+ LY QAA G+ AQ P + +A + +A
Sbjct: 386 -WAYDNGRGVPKDSAKAVELYLQAAAQGNFFAQNNLGIVFKNGMAVPMDLAQAFEWFMKA 444
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
+ + +QY + G V+ + +AA WY +AAE + Y + Y G G+
Sbjct: 445 AEQDYANSQYWVGYFYDHGWVVEKDHVKAAEWYEKAAEQKNAGSQYALAGMYETGRGVEK 504
Query: 247 SHRQA 251
+ ++A
Sbjct: 505 NLQKA 509
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 41/156 (26%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR--------------- 229
+A+ G +AQ+ +A+ G G + + A +WY ++AE GY R
Sbjct: 154 KAAEHGDPKAQFNIAVMHEDGEGAERDPALALKWYTKSAESGYKRPCYELGRIYENAECG 213
Query: 230 ----------------------AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A + + YS G + +++A KW KRAA G AQ
Sbjct: 214 VEKDMFKAFAYYLLAARKSDSKAQFKVGVFYSKGYAVHQDYKKAMKWYKRAAQQGDPDAQ 273
Query: 268 LEHGL----GLFTEGEMMKAVVYLELATRAGETAAD 299
G G TE + +AV + + A G A+
Sbjct: 274 CNLGWMYASGQGTEADDAQAVFWYQKAVVKGHAVAE 309
>gi|282891587|ref|ZP_06300078.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174833|ref|YP_004651643.1| hypothetical protein PUV_08390 [Parachlamydia acanthamoebae UV-7]
gi|281498555|gb|EFB40883.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479191|emb|CCB85789.1| uncharacterized protein ybeQ [Parachlamydia acanthamoebae UV-7]
Length = 537
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G+ ++ G+GV+K+ +A+ + K A +G +A D G MY W + + + A+ Y+ A
Sbjct: 279 GRLYESGKGVQKDYTEAIRWYQKAADQGLDIAQNDLGRMYQYGWGVPQDFQTALKFYQMA 338
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G +A+ N E+A +A+ + QY LAL GRG+
Sbjct: 339 AKNGLGSAETNIGVMYENGIGVQKNYEQAFNWYQKAADHENPEGQYNLALMYENGRGIQP 398
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
NLQ AA++Y AA G A N + Y G+G+ ++A +AA+ GH
Sbjct: 399 NLQTAAQYYQLAASQGSSLAQNNLGVFYLTGKGVEKDLKRAFDLFTQAAESGH 451
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKE--AAISLYRQAA 164
G+ +++G GV KNL +A + + + A + + + G Y E ++ K+ A+ +++AA
Sbjct: 172 GRFYENGIGVEKNLTEAFNYYREAADQNNPQGLNAVGRFYLEVLNPKDYNKALEYFQKAA 231
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
L ++ P+N A+ QA+ G+ AQ L G+GV +
Sbjct: 232 KLKYVHSENNLGVMYENGWGIPSNISAALAAYKQAADQGNPYAQANLGRLYESGKGVQKD 291
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
EA RWY +AA+ G A + Y +G G+P + A K+ + AA G G A E
Sbjct: 292 YTEAIRWYQKAADQGLDIAQNDLGRMYQYGWGVPQDFQTALKFYQMAAKNGLGSA--ETN 349
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADH 300
+G+ E + Y E A + AADH
Sbjct: 350 IGVMYENGIGVQKNY-EQAFNWYQKAADH 377
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G+ +++G GV ++ AL + A G A + G+MY E A + Y++A
Sbjct: 315 GRMYQYGWGVPQDFQTALKFYQMAAKNGLGSAETNIGVMYENGIGVQKNYEQAFNWYQKA 374
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A +P Q N + A + A+ G AQ L + G+GV+
Sbjct: 375 ADHENPEGQYNLALMYENGRGIQPNLQTAAQYYQLAASQGSSLAQNNLGVFYLTGKGVEK 434
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+L+ A + +AAE G+ A N Y G G+P + +A W +++A+
Sbjct: 435 DLKRAFDLFTQAAESGHPVAASNLGRLYETGSGVPQDYLKALYWYQKSAE 484
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++GRG++ NL A + A++GS+LA + G+ Y + K L R
Sbjct: 390 YENGRGIQPNLQTAAQYYQLAASQGSSLAQNNLGVFY--LTGKGVEKDLKR--------- 438
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A L QA+ +GH A L G GV + +A WY ++AE
Sbjct: 439 --------AFDLFTQAAESGHPVAASNLGRLYETGSGVPQDYLKALYWYQKSAEQNDPLG 490
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+Y Y G G ++ KRAA G+ +AQ E
Sbjct: 491 LYYLGRLYINGLGTQKKGQEGLDLFKRAARLGNPQAQAE 529
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L+ G + +G+GV ++ +A + K A RG+ AM G M+
Sbjct: 61 LQKGALYFYGKGVPQDYAEAFRWYKKSADRGNLEAMTLLGNMF----------------- 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+LG+ P N + A +L A+ +G+ AQ LA G V+ ++ +A Y +AAE
Sbjct: 104 ILGE--GVPKNYDTAFQLFSSAAQSGYSLAQNNLATMYENGWAVEQDIPKALELYRQAAE 161
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
A N Y G G+ + +A + + AAD
Sbjct: 162 QKNPFAQANLGRFYENGIGVEKNLTEAFNYYREAAD 197
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G+GV + EA RWY ++A+ G + AM + GEG+P ++ A + AA G+
Sbjct: 70 GKGVPQDYAEAFRWYKKSADRGNLEAMTLLGNMFILGEGVPKNYDTAFQLFSSAAQSGYS 129
Query: 265 KAQ 267
AQ
Sbjct: 130 LAQ 132
>gi|168333375|ref|ZP_02691655.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 439
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G+GV KNL +A + F + A + G+ Y Y V
Sbjct: 58 GIYYLNGKGVTKNLGRAFEWFKRSAENNNQYGEYWLGIFY------------YGGYHVSK 105
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D ++A++L+ +++ G+ AQ+ L C G GV L +A WY +AA+ G+
Sbjct: 106 DI-------KKAIELINRSAQQGYDAAQFNLGSCYANGHGVSKELHKAIWWYKKAADQGH 158
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
VRA Y + Y GEG + +A +W K +A+ GH +AQ
Sbjct: 159 VRAQYELANSYYNGEGTAKNLEKAVEWYKESAEQGHLEAQY 199
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAAISLYRQA 163
G + +G GV K L KA+ + K A +G A + Y+ + E A+ Y+++
Sbjct: 130 GSCYANGHGVSKELHKAIWWYKKAADQGHVRAQYELANSYYNGEGTAKNLEKAVEWYKES 189
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ N E A +L +++ G+++AQ + +C G GV
Sbjct: 190 AEQGHLEAQYKLARFYSTGEGVEKNDEMAFELYQKSAQQGNLKAQCAIGVCYEEGLGVHI 249
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
L +A WY +AAE G+ A Y C+ G+G+ +A +W ++AA G+ KAQ E
Sbjct: 250 ELGKAVEWYKKAAEKGFAEAQYRLGSCFERGKGVVKIQNKAFEWYEKAAKKGYAKAQCEL 309
Query: 271 GLGLFTE 277
G+ E
Sbjct: 310 GMCYVME 316
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 29/168 (17%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EA 155
A R G F+ G+GV K +KA + + K A +G A + G+ Y M+K
Sbjct: 267 AEAQYRLGSCFERGKGVVKIQNKAFEWYEKAAKKGYAKAQCELGMCY-VMEKGVKKDLAV 325
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A S Y++AA D Q + +ALC G GV+ +L+ A
Sbjct: 326 AFSWYKKAADQLDSTGQ-----------------------WLIALCYKTGSGVEKDLRRA 362
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A WY+++AE G + Y +CY+ GEG+ + +A++W+K+AAD H
Sbjct: 363 AWWYIKSAEQGDPQGQYGIGVCYANGEGVSKNIDKAKEWLKKAADQNH 410
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + G G+RK+ K++ F K A + + + + G+ Y ++ K +L R
Sbjct: 22 GKYYGSGDGIRKDYVKSMAWFKKAAEQEHSNSQYEIGIYY--LNGKGVTKNLGR------ 73
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
A + +++ + +Y L + + G V ++++A R+A+ GY
Sbjct: 74 -----------AFEWFKRSAENNNQYGEYWLGIFYYGGYHVSKDIKKAIELINRSAQQGY 122
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
A +N CY+ G G+ +A W K+AAD GH +AQ E
Sbjct: 123 DAAQFNLGSCYANGHGVSKELHKAIWWYKKAADQGHVRAQYE 164
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ +G G KNL+KA++ + + A +G A Y + E A LY+++A
Sbjct: 169 YYNGEGTAKNLEKAVEWYKESAEQGHLEAQYKLARFYSTGEGVEKNDEMAFELYQKSAQQ 228
Query: 167 GDPAAQPANA---EE----------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ AQ A EE AV+ +A+ G AQY+L C RG+GV
Sbjct: 229 GNLKAQCAIGVCYEEGLGVHIELGKAVEWYKKAAEKGFAEAQYRLGSCFERGKGVVKIQN 288
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+A WY +AA+ GY +A +CY +G+ A W K+AAD
Sbjct: 289 KAFEWYEKAAKKGYAKAQCELGMCYVMEKGVKKDLAVAFSWYKKAAD 335
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G +AQY+L G G+ + ++ W+ +AAE + + Y + Y G+G+
Sbjct: 8 KAAEHGDAQAQYELGKYYGSGDGIRKDYVKSMAWFKKAAEQEHSNSQYEIGIYYLNGKGV 67
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG------EMMKAVVYLELATRAGETAA 298
+ +A +W KR+A+ + E+ LG+F G ++ KA+ EL R+ +
Sbjct: 68 TKNLGRAFEWFKRSAE--NNNQYGEYWLGIFYYGGYHVSKDIKKAI---ELINRSAQQGY 122
Query: 299 D 299
D
Sbjct: 123 D 123
>gi|384222371|ref|YP_005613537.1| hypothetical protein BJ6T_87070 [Bradyrhizobium japonicum USDA 6]
gi|354961270|dbj|BAL13949.1| hypothetical protein BJ6T_87070 [Bradyrhizobium japonicum USDA 6]
Length = 1085
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +EA K +A+ AG V A ++L +G GV + A R+Y +AAE G +AM+N
Sbjct: 887 ANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKRDADIARRYYTQAAERGNAKAMHN 946
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ + G G +++ A +W ++AAD G +Q G+ G+ E + ++ + L
Sbjct: 947 LAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKWFTL 1006
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A G+ A ++ + ++L S A L + ++ A P
Sbjct: 1007 AAAQGDADASGKRDDVAKRLDPQSLAAAKLAIQTFSAEP 1045
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKKEAAI 157
+A G RF G+GV N D+A + + A G A G +Y + K++A I
Sbjct: 868 DATAAYEIGVRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKRDADI 927
Query: 158 S--LYRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
+ Y QAA G D + AN + A + +A+ G +Q+ L +
Sbjct: 928 ARRYYTQAAERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILY 987
Query: 203 HRGRGVDFNLQEAARWYLRAAEGG 226
RG GV+ NL E+ +W+ AA G
Sbjct: 988 ARGIGVEQNLAESYKWFTLAAAQG 1011
>gi|197117516|ref|YP_002137943.1| SEL1 repeat-containing lipoprotein [Geobacter bemidjiensis Bem]
gi|197086876|gb|ACH38147.1| SEL1 repeat-containing protein [Geobacter bemidjiensis Bem]
Length = 272
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 108/265 (40%), Gaps = 60/265 (22%)
Query: 63 SLPFDVLNKIAASFTLPQLRAAS---LVCKSWND-----ALRPLRE---AMVLLRWGKRF 111
SLP VL +A+S AAS + K+ ND AL+ R A L G +
Sbjct: 4 SLPGFVL--LASSLICSLAIAASNLDMAEKALNDGDYEKALQLYRADGGAQALNNIGIMY 61
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLG 167
G GVR++ +A+ LK AA G+ A V G MY D E A+ YR+A G
Sbjct: 62 YRGDGVRQDKAEAVHWLLKAAALGNEDAQVSLGQMYRTGDGVEENPAEAVKWYRKAGAQG 121
Query: 168 DPAAQP-------------------------------------------ANAEEAVKLLY 184
+ AQ A+ EA
Sbjct: 122 NQEAQAELERLYALKEDVETKWYRRDAERGMVRAQVNLGLIYYFGRDLGADKREAALWFS 181
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A++ G +AQY L L G G+D + E AR L AA+ G+ A Y S CY G+G+
Sbjct: 182 KAAVQGDAQAQYYYGLMLSEGDGIDPDAVEGARLLLSAAKAGHADAQYQISKCYLHGKGV 241
Query: 245 PLSHRQARKWMKRAADCGHGKAQLE 269
+ +A W+++AA G+ A E
Sbjct: 242 ARNADEAVAWLRKAASQGNHNAASE 266
>gi|319640883|ref|ZP_07995594.1| TPR repeat protein [Bacteroides sp. 3_1_40A]
gi|345519470|ref|ZP_08798893.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
gi|254834900|gb|EET15209.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
gi|317387520|gb|EFV68388.1| TPR repeat protein [Bacteroides sp. 3_1_40A]
Length = 307
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K+G GVRK+ A+ +L+ A G+T AM + G +Y
Sbjct: 145 GSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLY-------------------K 185
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + EEA +A+ + AQY + G G++ + + W +AA G
Sbjct: 186 NGLGVPQDFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGVEWLTKAALQGN 245
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN Y +G+G+ +QAR W ++A D GH KA+
Sbjct: 246 APAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAK 285
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 93/235 (39%), Gaps = 21/235 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G + DKAL F + AA G+T A + G MY A +A
Sbjct: 73 GDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKA 132
Query: 164 AVLGDPAAQPA------NAEEAVKLLYQA------SIA-GHVRAQYQLALCLHRGRGVDF 210
A G+P AQ N K Y A S+A G+ A + G GV
Sbjct: 133 ATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQ 192
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +EA W+ +AA+ A YN Y +GEG+ + +W+ +AA G+ AQ
Sbjct: 193 DFEEAYFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGVEWLTKAALQGNAPAQYNL 252
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
G G E ++ +A + + A G A + I LS + +L
Sbjct: 253 GRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALSKIKSDLSKEDTEDPLLFT 307
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQY +G G + + +A + + ++A GG A N Y++G G+ + QA
Sbjct: 67 HAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAF 126
Query: 253 KWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
KW+ +AA G+ +AQ+ G+G L+ G ++ Y+ +
Sbjct: 127 KWLNKAATQGNPEAQI--GMGSLYKNGWGVRKDCYIAM 162
>gi|195112224|ref|XP_002000674.1| GI22400 [Drosophila mojavensis]
gi|193917268|gb|EDW16135.1| GI22400 [Drosophila mojavensis]
Length = 816
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 339 YQGGKAIQQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 398
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+GDP Q P ++ +A+ QA+ G V Q QL G GV +
Sbjct: 399 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 458
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G ++L H
Sbjct: 459 KLALKYFNLATQSGHVLAYYNLGIMHAYGMGMLRSCPAAVEFFKNVAERGRWSSRLMHAY 518
Query: 273 GLFTEGEMMKAVVYLELATRAGETAA 298
+ + + +A + L G A
Sbjct: 519 SDYKQNRVDEAYMQYSLMAEVGYEVA 544
>gi|161620880|ref|YP_001594766.1| localization factor podJL [Brucella canis ATCC 23365]
gi|161337691|gb|ABX63995.1| Localization factor podJL [Brucella canis ATCC 23365]
Length = 913
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G AM
Sbjct: 665 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAM 724
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 725 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 784
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 785 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 825
>gi|377555776|ref|ZP_09785504.1| hypothetical protein eofBa_01839, partial [endosymbiont of
Bathymodiolus sp.]
Length = 474
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
Q + +G+ AQ+ LA G G + NL++A WY +AA+ G++ A Y + Y FG G+
Sbjct: 90 QVAESGYSTAQFNLAELYDSGVGTEKNLKQAIFWYAKAAQQGFIAAQYKLATIYHFGRGV 149
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ +AR W +AA G AQL G L+ +GE
Sbjct: 150 EVDDVKARYWYTKAAKLGLAPAQLALG-KLYDKGE 183
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
+ QP + L + + +G++RAQ LA HRG V + + A WY + AE GY
Sbjct: 39 SGQPLPTTPILTQLSKDAKSGNIRAQLSLARMYHRGINVTKDTKLAFYWYSQVAESGYST 98
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A +N + Y G G + +QA W +AA G AQ
Sbjct: 99 AQFNLAELYDSGVGTEKNLKQAIFWYAKAAQQGFIAAQ 136
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 8/174 (4%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA 155
+PL +L + K K G +R L S + RG + YW E+
Sbjct: 41 QPLPTTPILTQLSKDAKSG-NIRAQL-----SLARMYHRGINVTKDTKLAFYWYSQVAES 94
Query: 156 AISL--YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
S + A + N ++A+ +A+ G + AQY+LA H GRGV+ +
Sbjct: 95 GYSTAQFNLAELYDSGVGTEKNLKQAIFWYAKAAQQGFIAAQYKLATIYHFGRGVEVDDV 154
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A WY +AA+ G A Y GEG+ A+ W + AA + +AQ
Sbjct: 155 KARYWYTKAAKLGLAPAQLALGKLYDKGEGVAKDLAAAQHWYEVAAVQSNAEAQ 208
>gi|421863475|ref|ZP_16295172.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379065|emb|CBX22367.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 306
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GVR++ +A+ + K A +G A D GLMY++ + A+ +R+A
Sbjct: 84 GAMYYTGEGVRQDDAQAVQWYRKAAEQGLAQAQSDLGLMYYKGEGVRQDNAQAVHWFRKA 143
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + +AV+ +A+ G +AQ L +GRGV
Sbjct: 144 AEQGLAQAQSNLGVMYAQGRGVRQDDAQAVQWYRRAAEQGDAQAQSYLGDMYAQGRGVRQ 203
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + +WY +AAE G RA +N + Y G G+ QA +W ++AA+ + AQ
Sbjct: 204 DDAQVVQWYRKAAEQGLARAQFNLGVMYDNGRGVRQDDAQAVQWYRKAAEQEYADAQNNL 263
Query: 271 GLGLFTEGE 279
G+ ++ +G+
Sbjct: 264 GV-MYEQGQ 271
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
+ G GVR++ +A+ F K A +G A + G+MY + D +A + YR+AA
Sbjct: 123 YYKGEGVRQDNAQAVHWFRKAAEQGLAQAQSNLGVMYAQGRGVRQDDAQA-VQWYRRAAE 181
Query: 166 LGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD AQ + + V+ +A+ G RAQ+ L + GRGV +
Sbjct: 182 QGDAQAQSYLGDMYAQGRGVRQDDAQVVQWYRKAAEQGLARAQFNLGVMYDNGRGVRQDD 241
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+A +WY +AAE Y A N + Y G+G+ A++W +A D G+
Sbjct: 242 AQAVQWYRKAAEQEYADAQNNLGVMYEQGQGVLQDLALAQEWYGKACDNGN 292
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+ +AQ L + + G GV + +A +W+ +AAE GY A YN Y GEG+
Sbjct: 34 QAAEQGNAQAQSDLGVMYYTGEGVRQDDVQAVQWFRKAAEQGYAGAQYNLGAMYYTGEGV 93
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAAD 299
QA +W ++AA+ G +AQ + GL ++ +GE ++ AV + A G A
Sbjct: 94 RQDDAQAVQWYRKAAEQGLAQAQSDLGL-MYYKGEGVRQDNAQAVHWFRKAAEQGLAQAQ 152
Query: 300 HVKNVILQQLSATSRDRAMLV 320
V+ Q +D A V
Sbjct: 153 SNLGVMYAQGRGVRQDDAQAV 173
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GVR++ +A+ F K A +G A + G MY Y V
Sbjct: 48 GVMYYTGEGVRQDDVQAVQWFRKAAEQGYAGAQYNLGAMY------------YTGEGVRQ 95
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A +AV+ +A+ G +AQ L L ++G GV + +A W+ +AAE G
Sbjct: 96 DDA-------QAVQWYRKAAEQGLAQAQSDLGLMYYKGEGVRQDNAQAVHWFRKAAEQGL 148
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A N + Y+ G G+ QA +W +RAA+ G +AQ
Sbjct: 149 AQAQSNLGVMYAQGRGVRQDDAQAVQWYRRAAEQGDAQAQ 188
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L+ A +G+ A D G+MY Y V D +AV+ +A+
Sbjct: 33 LQAAEQGNAQAQSDLGVMY------------YTGEGVRQDDV-------QAVQWFRKAAE 73
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ AQY L + G GV + +A +WY +AAE G +A + L Y GEG+ +
Sbjct: 74 QGYAGAQYNLGAMYYTGEGVRQDDAQAVQWYRKAAEQGLAQAQSDLGLMYYKGEGVRQDN 133
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKN 303
QA W ++AA+ G +AQ G+ ++ +G + +AV + A G+ A
Sbjct: 134 AQAVHWFRKAAEQGLAQAQSNLGV-MYAQGRGVRQDDAQAVQWYRRAAEQGDAQAQSYLG 192
Query: 304 VILQQLSATSRDRAMLV 320
+ Q +D A +V
Sbjct: 193 DMYAQGRGVRQDDAQVV 209
>gi|303272629|ref|XP_003055676.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463650|gb|EEH60928.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 114
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 23/124 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +K GRGV KN+D A++ F K A +G A+ G +++E + + A + QAA+ G
Sbjct: 3 GRLYKSGRGVEKNIDTAIEWFTKAADKGHVSALNSIGTLHYEAGRYKEAFPWFSQAAIRG 62
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ V A++ + LC GRGV ++ +A W+ +AAE G+
Sbjct: 63 E-----------------------VMAEHNIGLCYKLGRGVTKDIPKAIEWFTKAAEKGF 99
Query: 228 VRAM 231
++
Sbjct: 100 AESI 103
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N + A++ +A+ GHV A + LH G +EA W+ +AA G V A +N
Sbjct: 15 NIDTAIEWFTKAADKGHVSALNSIG-TLHYEAG---RYKEAFPWFSQAAIRGEVMAEHNI 70
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCG 262
LCY G G+ +A +W +AA+ G
Sbjct: 71 GLCYKLGRGVTKDIPKAIEWFTKAAEKG 98
>gi|323450600|gb|EGB06480.1| hypothetical protein AURANDRAFT_29118, partial [Aureococcus
anophagefferens]
Length = 874
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPA 170
G+ ++ KA + + G+ AM + GL Y ++DKK+A L+R AA GD A
Sbjct: 626 GLVESDKKAAKIYRRAVELGNVDAMNNLGLFYNNGFGVKLDKKKAE-RLFRTAADRGDAA 684
Query: 171 AQPA---------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY-- 219
AQ + EEA + A+ G+ + L +C +G G + +L +A W+
Sbjct: 685 AQTSLGFLLDTEEKHEEAFRCYVLAADQGYTTGELNLGICYEQGEGTEVDLGKARYWFEP 744
Query: 220 ----LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
RA E G V AM Y G G+ L ++A + + AAD G+ AQ G+ L
Sbjct: 745 AKIWKRAVELGSVEAMVFLGELYEHGNGVKLDKKKAERLWRMAADRGNATAQCNLGVLLH 804
Query: 276 TEGEMMKAVVYLELATRAGET 296
+E + +++ Y L+ G T
Sbjct: 805 SEEKFEESLRYYALSADQGYT 825
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 89 KSWNDA--LRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
K W A LR +R AMV L G ++HG GV+ + KA + A RG +A + G++
Sbjct: 178 KIWKRAVELRDVR-AMVFL--GSLYEHGSGVKLDKKKAERLYRAAADRGHAVAQFNVGIL 234
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
+ +K E A Y +A G A + SI+ L + GR
Sbjct: 235 LFSEEKFEEAFRYYALSADQGYTAGENN---------LGCSIS-------HLGIAYRCGR 278
Query: 207 -GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
G+ + + AA+ + RA E G V AM + Y G G+ L ++A + + AAD GH
Sbjct: 279 YGLVKSDKPAAKIWKRAVELGNVDAMRHLGAMYEHGSGVKLDKKKAERLYRAAADRGHAV 338
Query: 266 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
AQ G+ L +E + +AV Y LA G T A+
Sbjct: 339 AQCNLGIFLDSEKKFEEAVRYFALAADQGYTDAEQ 373
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 95/245 (38%), Gaps = 52/245 (21%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQPANA 176
+KA + + G+ AM+ G +Y ++DKK+A LYR A GD AQ A
Sbjct: 491 EKAAKIYRRAVELGNVDAMLKLGFLYENGSGVKLDKKKAE-RLYRMGADRGDAVAQNNVA 549
Query: 177 ---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
EEA + A+ G A+ L +C RG G + +EA R+Y AA+ GY
Sbjct: 550 FLLVSEKKFEEAFRYFVLAADQGLTSAENNLGMCYRRGEGTEKKFEEAFRYYALAADQGY 609
Query: 228 -------------------------------------VRAMYNTSLCYSFGEGLPLSHRQ 250
V AM N L Y+ G G+ L ++
Sbjct: 610 TDAEHSLGYAYRRGLYGLVESDKKAAKIYRRAVELGNVDAMNNLGLFYNNGFGVKLDKKK 669
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 310
A + + AAD G AQ G L TE + +A LA G T + + +Q
Sbjct: 670 AERLFRTAADRGDAAAQTSLGFLLDTEEKHEEAFRCYVLAADQGYTTGELNLGICYEQGE 729
Query: 311 ATSRD 315
T D
Sbjct: 730 GTEVD 734
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ---------PANAEEAV 180
G+ AM G MY ++DKK+A LYR AA G AQ EEAV
Sbjct: 299 GNVDAMRHLGAMYEHGSGVKLDKKKAE-RLYRAAADRGHAVAQCNLGIFLDSEKKFEEAV 357
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS-LCYS 239
+ A+ G+ A+ L C G G + +L +A W+ RAA G+ +A+ + L
Sbjct: 358 RYFALAADQGYTDAEQNLGCCYMGGEGTEVDLGKARYWFERAAAKGHEKAIQALARLDAR 417
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
G G+ L ++A + + AAD G AQ G+ L +E + + Y LA G T A+
Sbjct: 418 TGSGVKLDKKKAERLFRMAADRGDAGAQSNLGILLASEEKFEETFRYFALAADQGWTNAE 477
Query: 300 HVKNVILQQLSATSR 314
+ + + T +
Sbjct: 478 NNLGICYRDGDGTEK 492
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 46/244 (18%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPA 170
G+ K+ KA + + G+ AM G MY E +DKK+A LYR AA G
Sbjct: 33 GLVKSDKKAAKIYRRAVELGNVDAMTFLGDMYDEGLGVKLDKKKAE-ELYRTAADRGHAV 91
Query: 171 AQ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD------------ 209
AQ EEA + A+ G+ A+ L C G G +
Sbjct: 92 AQCNLAFVLGSQKKKEEAFRYCALAADQGYTFAENNLGCCYRDGAGTELAQLRRHVENEV 151
Query: 210 ---------------FNL----QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
F L ++AA+ + RA E VRAM Y G G+ L ++
Sbjct: 152 PEAITHLGSVYREGLFGLVKSDKKAAKIWKRAVELRDVRAMVFLGSLYEHGSGVKLDKKK 211
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 310
A + + AAD GH AQ G+ LF+E + +A Y L+ G TA ++ + L
Sbjct: 212 AERLYRAAADRGHAVAQFNVGILLFSEEKFEEAFRYYALSADQGYTAGENNLGCSISHLG 271
Query: 311 ATSR 314
R
Sbjct: 272 IAYR 275
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ ++A +L A+ G+ AQ L + LH + +E+ R+Y +A+ GY N
Sbjct: 776 DKKKAERLWRMAADRGNATAQCNLGVLLHS----EEKFEESLRYYALSADQGYTPGEINL 831
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGH 263
CYS G+G + +AR +RAA GH
Sbjct: 832 GGCYSDGQGTEVDLGKARYLFERAAAKGH 860
>gi|23500552|ref|NP_699992.1| peptidoglycan-binding protein [Brucella suis 1330]
gi|376278773|ref|YP_005108806.1| peptidoglycan-binding protein, putative [Brucella suis VBI22]
gi|384223334|ref|YP_005614499.1| peptidoglycan-binding protein [Brucella suis 1330]
gi|23464187|gb|AAN33997.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
gi|343384782|gb|AEM20273.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
gi|358260211|gb|AEU07944.1| peptidoglycan-binding protein, putative [Brucella suis VBI22]
Length = 913
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G AM
Sbjct: 665 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAM 724
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 725 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 784
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 785 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 825
>gi|264676919|ref|YP_003276825.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262207431|gb|ACY31529.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 542
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G GV ++ A F + A + A + G +Y A LG
Sbjct: 301 GRLYLYGLGVEQSPAYAAQWFQRAADQNHADAQYNLGTIY---------------AEGLG 345
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N A++ +A+ GH A + GRGV N A +W+ RAA+ G
Sbjct: 346 TPQ----NYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRAADKGD 401
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMK 282
A +N + Y+ G+G S QA KW AA+ GH AQ G+ ++ EG+ K
Sbjct: 402 ASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGV-MYAEGQGAARDYGK 460
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
AV + + A G+ AA + ++ Q RD A
Sbjct: 461 AVQWYQRAAEQGDAAAQYNLGMVYAQGQGVPRDNA 495
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G G +N AL + K A +G A+ + G +Y E A+ +R+A
Sbjct: 337 GTIYAEGLGTPQNYGTALQWYQKAAEQGHAAAINNVGTLYAEGRGVAQNYATAMQWFRRA 396
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD +AQ A+ +A+K A+ GH AQ +L + G+G
Sbjct: 397 ADKGDASAQFNLARLYADGQGSAASPAQAMKWYAAAAEQGHSGAQNRLGVMYAEGQGAAR 456
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ +A +WY RAAE G A YN + Y+ G+G+P + +A W AA
Sbjct: 457 DYGKAVQWYQRAAEQGDAAAQYNLGMVYAQGQGVPRDNARAYFWYNLAA 505
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + HG+GV +N A F K AA+G A G +Y + YR+AA
Sbjct: 85 GEMYVHGQGVPQNAATAAQWFRKAAAQGHAGAQNSLGALY---ANGQGLPQNYREAAQWY 141
Query: 168 DPAAQPANAEEAVKL--LYQASIA------------------GHVRAQYQLALCLHRGRG 207
AAQ NA L LYQ + GHV AQ++L +G G
Sbjct: 142 GRAAQQNNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNG 201
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N AA W+ +AA+ G+ A S G G+ L QA +W++RAA+ G +AQ
Sbjct: 202 VAVNYMTAADWFKKAADQGHAEAQNQLGSMLSDGVGVKLDPVQAAQWLQRAAEQGDARAQ 261
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P NA A + +A+ GH AQ L G+G+ N +EAA+WY RAA+ A Y
Sbjct: 95 PQNAATAAQWFRKAAAQGHAGAQNSLGALYANGQGLPQNYREAAQWYGRAAQQNNAVAQY 154
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
N S Y G G+P S A +W++++A GH AQ E G
Sbjct: 155 NLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELG 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 96/246 (39%), Gaps = 32/246 (13%)
Query: 70 NKIAASFTLPQLRAASL-VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLD 122
N A + L L L V +S++ A + L ++ G+R+ G GV N
Sbjct: 148 NNAVAQYNLSHLYQEGLGVPQSFSTAAQWLEKSAAQGHVTAQFELGQRYLKGNGVAVNYM 207
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKL 182
A D F K A +G A G M L V DP +A +
Sbjct: 208 TAADWFKKAADQGHAEAQNQLGSM------------LSDGVGVKLDPV-------QAAQW 248
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ G RAQ L G GV + + AA W+ ++AE + Y +G
Sbjct: 249 LQRAAEQGDARAQNSLGRMYMDGVGVPRDYKLAASWFQKSAEQWNADGQNHLGRLYLYGL 308
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
G+ S A +W +RAAD H AQ G GL T A+ + + A G AA
Sbjct: 309 GVEQSPAYAAQWFQRAADQNHADAQYNLGTIYAEGLGTPQNYGTALQWYQKAAEQGHAAA 368
Query: 299 DHVKNV 304
+ NV
Sbjct: 369 --INNV 372
>gi|260567915|ref|ZP_05838384.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
40]
gi|261753776|ref|ZP_05997485.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
686]
gi|376276522|ref|YP_005152583.1| peptidoglycan-binding domain-containing protein [Brucella canis HSK
A52141]
gi|260154580|gb|EEW89661.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
40]
gi|261743529|gb|EEY31455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
686]
gi|363404896|gb|AEW15190.1| peptidoglycan-binding domain 1 protein [Brucella canis HSK A52141]
Length = 942
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G AM
Sbjct: 694 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAM 753
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 754 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 813
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 814 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 854
>gi|444921868|ref|ZP_21241696.1| Putative protein YbeQ [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507036|gb|ELV07220.1| Putative protein YbeQ [Wohlfahrtiimonas chitiniclastica SH04]
Length = 264
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLY 160
++ G F +G GV ++ +AL + A +G++ A + GLM+ + AI Y
Sbjct: 76 VKIGLMFYNGEGVPQSYTEALKWYKLAAEQGNSDAQIKIGLMFHNGVGVLKNYSEAIKWY 135
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ A+ GD A P N EA+K ++ G+ A+ Q+ L + G G
Sbjct: 136 KLASAKGDDIASYFLGNIFIDGEGVPQNYSEALKWYKLSAKQGNADAKTQIGLMFYNGEG 195
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
VD N EA +W+ AAE A + + G+G+ ++++A++W +A D G
Sbjct: 196 VDQNYFEAKKWFALAAEQNEGIAQALLGMMFYEGQGVKHNYKEAKEWFGKACDNG 250
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 63 SLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLD 122
+L F++ A +F+ +L+ L+ + N A +LL G F G + ++
Sbjct: 8 ALIFNI--SFAKTFSSEELKKFHLMAEQGNVG------AQMLL--GNIFYDGENLPQSYT 57
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGDPAAQPA---- 174
+AL + A +G+ A V GLM++ + A+ Y+ AA G+ AQ
Sbjct: 58 EALKWYKLAAEQGNIYAPVKIGLMFYNGEGVPQSYTEALKWYKLAAEQGNSDAQIKIGLM 117
Query: 175 ---------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
N EA+K AS G A Y L G GV N EA +WY +A+
Sbjct: 118 FHNGVGVLKNYSEAIKWYKLASAKGDDIASYFLGNIFIDGEGVPQNYSEALKWYKLSAKQ 177
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
G A L + GEG+ ++ +A+KW AA+ G AQ G+ +F EG+ +K
Sbjct: 178 GNADAKTQIGLMFYNGEGVDQNYFEAKKWFALAAEQNEGIAQALLGM-MFYEGQGVK 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
+ E +K + + G+V AQ L + G + + EA +WY AAE G + A
Sbjct: 20 SSEELKKFHLMAEQGNVGAQMLLGNIFYDGENLPQSYTEALKWYKLAAEQGNIYAPVKIG 79
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELA 290
L + GEG+P S+ +A KW K AA+ G+ AQ++ GL +F G +A+ + +LA
Sbjct: 80 LMFYNGEGVPQSYTEALKWYKLAAEQGNSDAQIKIGL-MFHNGVGVLKNYSEAIKWYKLA 138
Query: 291 TRAGETAADH-VKNVIL 306
+ G+ A + + N+ +
Sbjct: 139 SAKGDDIASYFLGNIFI 155
>gi|261750518|ref|ZP_05994227.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
513]
gi|261740271|gb|EEY28197.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
513]
Length = 942
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G AM
Sbjct: 694 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAM 753
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 754 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 813
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 814 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 854
>gi|257094316|ref|YP_003167957.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046840|gb|ACV36028.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 878
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 26/215 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKEA-AISLYRQAAVLGDP 169
G+GV K+ +A+ F K A G ++ G Y+ + K E A+ YR+AA G+
Sbjct: 664 GKGVAKDEVEAVKWFRKSAEEGDAGGQLNLGHAYFIGTGVAKDEVEAVKWYRKAAEQGNA 723
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
Q + EAVK + + G+ R Q L +G GV N EA
Sbjct: 724 TGQFNLGVAYETGIGVAKDEVEAVKWYRKTAEQGNARGQLNLGYAYFKGIGVAKNEVEAV 783
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEH 270
+WY +AAE G + Y G G+ + +A KW ++AA+ G+ Q H
Sbjct: 784 KWYRKAAEQGDATGQLKLGVAYKTGTGVAKNEVEAVKWSRKAAEQGNADGQWFLGYAYFH 843
Query: 271 GLGLFTEGEMMKAVVYLELATRAG-ETAADHVKNV 304
G+GL + ++AV + A G +TA D ++ +
Sbjct: 844 GIGLAK--DEVEAVKWFRKAAEQGHQTAIDRLRAI 876
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKEA-AISLYRQA 163
G + +G GV K+ +A+ + K A +G+ + G Y+ + K E A+ +R++
Sbjct: 622 GYAYFNGIGVAKDEVEAVKWYRKAAEQGNARGQSNLGHAYFIGKGVAKDEVEAVKWFRKS 681
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD Q + EAVK +A+ G+ Q+ L + G GV
Sbjct: 682 AEEGDAGGQLNLGHAYFIGTGVAKDEVEAVKWYRKAAEQGNATGQFNLGVAYETGIGVAK 741
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ EA +WY + AE G R N Y G G+ + +A KW ++AA+ G QL+
Sbjct: 742 DEVEAVKWYRKTAEQGNARGQLNLGYAYFKGIGVAKNEVEAVKWYRKAAEQGDATGQLKL 801
Query: 271 GLGLFT 276
G+ T
Sbjct: 802 GVAYKT 807
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 64/163 (39%), Gaps = 22/163 (13%)
Query: 116 GVRKNLDK---ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
GVR LDK +D A RG+ A D MY E
Sbjct: 555 GVRSYLDKHPTKIDELKTLARRGNADAQADLARMYVE-------------------GWGV 595
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + + ++ A+ G+ R Q L G GV + EA +WY +AAE G R
Sbjct: 596 PKDDSDGLRWARSAADQGNSRGQNTLGYAYFNGIGVAKDEVEAVKWYRKAAEQGNARGQS 655
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
N Y G+G+ +A KW +++A+ G QL G F
Sbjct: 656 NLGHAYFIGKGVAKDEVEAVKWFRKSAEEGDAGGQLNLGHAYF 698
>gi|429750339|ref|ZP_19283391.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165409|gb|EKY07464.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 262
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+K L + G + AQ LALC +G GV + Q+AA WY AA G+ +A L
Sbjct: 23 IKTLIAKASKGDIEAQAYLALCYEKGTGVAQSYQKAAMWYESAANKGHAKAQTKLGLLIY 82
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EGEMMKAVVYLELATRAGE 295
G+G+P S+++A +W +RAA+ G+ + Q + G+ + +G VV +E +A E
Sbjct: 83 KGQGVPQSYKKAAEWFERAANQGYAEGQTKIGICYYKGQGVAQSDVVAVEWWQKAAE 139
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ GH +AQ +L L +++G+GV + ++AA W+ RAA GY +CY G+G+
Sbjct: 65 AANKGHAKAQTKLGLLIYKGQGVPQSYKKAAEWFERAANQGYAEGQTKIGICYYKGQGVA 124
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
S A +W ++AA+ +G+AQ G F +G+ + +AV + ELA + G+ A
Sbjct: 125 QSDVVAVEWWQKAAEQNYGEAQSLLGYA-FLKGQGVGQSDEEAVAWFELAAQQGDIDA 181
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDP 169
G+GV ++ KA + F + A +G G+ Y++ A+ +++AA
Sbjct: 84 GQGVPQSYKKAAEWFERAANQGYAEGQTKIGICYYKGQGVAQSDVVAVEWWQKAAEQNYG 143
Query: 170 AAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ + EEAV A+ G + AQ L C +G+GVD + ++A
Sbjct: 144 EAQSLLGYAFLKGQGVGQSDEEAVAWFELAAQQGDIDAQRDLGNCYFQGKGVDQSYEKAI 203
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
WY RAA+ G A LCY G+G S +A W++++
Sbjct: 204 GWYERAAQQGDKEAQMLLGLCYEQGKGTDRSQAKAIFWIEKS 245
>gi|383769050|ref|YP_005448113.1| hypothetical protein S23_07810 [Bradyrhizobium sp. S23321]
gi|381357171|dbj|BAL74001.1| hypothetical protein S23_07810 [Bradyrhizobium sp. S23321]
Length = 1089
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +EA K +A+ AG V A ++L +G GV + A R+Y +AAE G +AM+N
Sbjct: 891 ANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADIARRYYTQAAERGNAKAMHN 950
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ + G G +++ A +W ++AAD G +Q G+ G+ E + ++ + L
Sbjct: 951 LAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKWFSL 1010
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A G+ A ++ + ++L S A L + ++ A P
Sbjct: 1011 AAAQGDGDASGKRDDVAKRLDPQSLAAAKLAIQTFSAEP 1049
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+++ + G+GV N EAA+WY RAA+ G V A + Y G G+ AR++
Sbjct: 877 FEIGMRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADIARRYY 936
Query: 256 KRAADCGHGKAQLEHGLGLF 275
+AA+ G+ KA H L +
Sbjct: 937 TQAAERGNAKAM--HNLAVL 954
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKKEAAIS--LYRQA 163
G RF G+GV N D+A + + A G A G +Y + KK+A I+ Y QA
Sbjct: 880 GMRFAEGKGVAANYDEAAKWYDRAAQAGVVPATFRLGTLYEKGLGVKKDADIARRYYTQA 939
Query: 164 AVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G D + AN + A + +A+ G +Q+ L + RG GV+
Sbjct: 940 AERGNAKAMHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQ 999
Query: 211 NLQEAARWY-LRAAEG 225
NL E+ +W+ L AA+G
Sbjct: 1000 NLAESYKWFSLAAAQG 1015
>gi|195392343|ref|XP_002054817.1| GJ24649 [Drosophila virilis]
gi|194152903|gb|EDW68337.1| GJ24649 [Drosophila virilis]
Length = 810
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 340 YQGGKAIQQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 399
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+GDP Q P ++ +A+ QA+ G V Q QL G GV +
Sbjct: 400 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 459
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G ++L H
Sbjct: 460 KLALKYFNLATQSGHVLAYYNLGIMHAYGMGMLRSCPAAVEFFKNVAERGRWSSRLMHAY 519
Query: 273 GLFTEGEMMKAVVYLELATRAGETAA 298
+ + + +A + L G A
Sbjct: 520 SDYKQNRIDEAYMQYSLMAEVGYEVA 545
>gi|163844942|ref|YP_001622597.1| hypothetical protein BSUIS_B0814 [Brucella suis ATCC 23445]
gi|163675665|gb|ABY39775.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 913
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G AM
Sbjct: 665 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAM 724
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 725 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 784
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V+ W+A P
Sbjct: 785 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 825
>gi|256820691|ref|YP_003141970.1| Sel1 domain-containing protein repeat-containing protein
[Capnocytophaga ochracea DSM 7271]
gi|256582274|gb|ACU93409.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea DSM 7271]
Length = 278
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLCYY-----------YRKGV 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 104 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAAD 155
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EM 280
+ A CY G G+ S A W ++AA+ G +AQ G F +G
Sbjct: 156 QDFAEAQSFLGYCYYKGLGVAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSY 215
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 216 TKAIFWFEKAANQGDKEAQTI 236
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AAE G V++ LC
Sbjct: 37 EDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLC 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
SW + + + G + + +GV ++ +KA F K A +G A G+ Y +
Sbjct: 76 SWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHK 135
Query: 150 ----MDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHV 192
E A+ +++AA AQ + +AV +A+ G V
Sbjct: 136 GQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVFWYEKAANQGDV 195
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ L +G+G+ + +A W+ +AA G A CY G G+ S ++A
Sbjct: 196 EAQRNLGSYYFKGQGIPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAI 255
Query: 253 KWMKRAA 259
W ++
Sbjct: 256 YWFEKGC 262
>gi|422021066|ref|ZP_16367580.1| hypothetical protein OO7_00645 [Providencia sneebia DSM 19967]
gi|414099971|gb|EKT61604.1| hypothetical protein OO7_00645 [Providencia sneebia DSM 19967]
Length = 262
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G GV ++ A + F+K +G+ A G MY + R
Sbjct: 52 GERYFTGDGVSQDSKTAAEWFIKAGDKGNVDAQFRLGTMYVN------GFGVRR------ 99
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ E+A+ QA+ RA+ +A+ +G GV + +AA W+ +AA+GG
Sbjct: 100 -------DYEKAMLWYEQAAKQNDTRAETNMAMMYAQGLGVTQDSTKAAFWFRKAAQGGN 152
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----- 282
V A +N YS G G+ + + +A W ++AA K+Q G+ ++ EG+ +K
Sbjct: 153 VIAQFNIGQMYSVGNGVDVDNEKAVFWFRKAAKQHDAKSQDRLGV-MYFEGKGVKKNLQQ 211
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
A +L A +G + ++ I ++L +A + D++
Sbjct: 212 AYAWLSTAVYSGNKESHRLQQKIAEKLDENELKQAQKLADNY 253
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
R G + +G GVR++ +KA+ + + A + T A + +MY A
Sbjct: 85 FRLGTMYVNGFGVRRDYEKAMLWYEQAAKQNDTRAETNMAMMY---------------AQ 129
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG ++ +A +A+ G+V AQ+ + G GVD + ++A W+ +AA+
Sbjct: 130 GLG----VTQDSTKAAFWFRKAAQGGNVIAQFNIGQMYSVGNGVDVDNEKAVFWFRKAAK 185
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
++ + Y G+G+ + +QA W+ A G+
Sbjct: 186 QHDAKSQDRLGVMYFEGKGVKKNLQQAYAWLSTAVYSGN 224
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
+ +++ ++ + +A+ G +Q+ L G GV + + AA W+++A + G V A +
Sbjct: 26 SSTSQQTIEQVTEAAHNGEPTSQFLLGERYFTGDGVSQDSKTAAEWFIKAGDKGNVDAQF 85
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLE 288
Y G G+ + +A W ++AA +A+ + + GL + KA +
Sbjct: 86 RLGTMYVNGFGVRRDYEKAMLWYEQAAKQNDTRAETNMAMMYAQGLGVTQDSTKAAFWFR 145
Query: 289 LATRAGETAA 298
A + G A
Sbjct: 146 KAAQGGNVIA 155
>gi|329123578|ref|ZP_08252140.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
gi|327470320|gb|EGF15780.1| Sel1 repeat protein [Haemophilus aegyptius ATCC 11116]
Length = 189
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV+++ +A+ F K A +G A G MY D
Sbjct: 5 YAKGQGVKQDDFEAVKWFRKAAEQGHAEAQFSLGNMY-------------------SDGI 45
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ EAVK +A+ G+ AQ L + GRGV + +A +WY +A E GY A
Sbjct: 46 GVKQDDFEAVKWYRKAADQGYAGAQMNLGVMYANGRGVKQDYFKAVKWYRKAVEQGYANA 105
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
N YS G G+ + +A KW K+AA+ G Q + GL
Sbjct: 106 QANLGSAYSAGRGVRQDYTEAVKWFKKAAENGSADGQFKLGL 147
>gi|189502557|ref|YP_001958274.1| hypothetical protein Aasi_1218 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497998|gb|ACE06545.1| hypothetical protein Aasi_1218 [Candidatus Amoebophilus asiaticus
5a2]
Length = 552
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 69 LNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF 128
LN+ A Q+R + DA + + + L W + HG G+R+N +A+ +
Sbjct: 366 LNRAEAERLCLQIREKIAI-----DAQKGDADCQLSLGW--MYYHGCGIRRNYSRAMAWY 418
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
LK A +G A + G+MY A + A + +A + +A+
Sbjct: 419 LKSANQGCAAAQNNLGVMY--------AYDWF---------GAIKKDYTKAREWYQKAAE 461
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ AQ L + G+GV+ + ++A WY +AAE GY A Y+ + Y G G+ +
Sbjct: 462 QGYAHAQSNLGGLYYSGQGVEKDDRKACEWYQKAAEQGYAHAQYSLGIMYRNGFGVGKDN 521
Query: 249 RQARKWMKRAADCGHGKAQL 268
+A +W ++AA+ G+ AQ+
Sbjct: 522 IKAIEWFRKAAEKGYEDAQI 541
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYN 233
+ +EA+K + + GH+ AQY L GR G+ N +A RWY +AAE GY A Y
Sbjct: 258 DEQEAIKHCKEGATIGHMYAQYVLGNKYRSGRQGLKRNYAKAKRWYEKAAEQGYAEAQYK 317
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y GEG+ + +A+K ++AA G AQ
Sbjct: 318 LGAMYDNGEGVTIDFIEAKKCYEKAACQGVAVAQ 351
>gi|345860845|ref|ZP_08813131.1| sel1 repeat family protein [Desulfosporosinus sp. OT]
gi|344326071|gb|EGW37563.1| sel1 repeat family protein [Desulfosporosinus sp. OT]
Length = 204
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ + EAV L +A++ GH AQY+L + GRG+ N + A +W++R+AE GY +A
Sbjct: 33 AESKDLPEAVILFREAALEGHPGAQYELGVSYCAGRGIKQNSESAVQWFIRSAENGYPKA 92
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
++N + +S G+G+ +A +AA GH +Q
Sbjct: 93 LHNLGVRHSIGKGVDEDAVRAASLFLQAASQGHALSQF 130
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 39/187 (20%)
Query: 96 RPLREAMVLLR-------------WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
+ L EA++L R G + GRG+++N + A+ F++ A G A+ +
Sbjct: 36 KDLPEAVILFREAALEGHPGAQYELGVSYCAGRGIKQNSESAVQWFIRSAENGYPKALHN 95
Query: 143 AGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCL 202
G+ + +G + +A A L QA+ GH +Q++LA+
Sbjct: 96 LGVRH-----------------SIGKGVDE--DAVRAASLFLQAASQGHALSQFKLAVMY 136
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV +EA +W+ A + G N +LC E + + +AR W+K A G
Sbjct: 137 KIGWGVQQKDEEADKWFGLAGDTG-----KNEALC-PLSEIVKQENDRAR-WLKAAMSRG 189
Query: 263 HGKAQLE 269
+ + E
Sbjct: 190 YSENAFE 196
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
A YQL + + GR +L EA + AA G+ A Y + Y G G+ + A
Sbjct: 19 EADYQLGMDIISGRAESKDLPEAVILFREAALEGHPGAQYELGVSYCAGRGIKQNSESAV 78
Query: 253 KWMKRAADCGHGKAQLEHGLGL 274
+W R+A+ G+ KA H LG+
Sbjct: 79 QWFIRSAENGYPKAL--HNLGV 98
>gi|345322950|ref|XP_001505693.2| PREDICTED: protein sel-1 homolog 1, partial [Ornithorhynchus
anatinus]
Length = 415
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAV 165
F H + +A D F A G++ AM G MY E E A+ +++AA
Sbjct: 8 FFHHKNNEAQNKRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAAD 67
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+G+P Q P N + A+K +A+ G V Q QL + G GV +
Sbjct: 68 MGNPVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDY 127
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++A +++ A++GG++ A YN + ++ G G+ S A + K + G +L
Sbjct: 128 KQALKYFNLASQGGHILAFYNLAQMHATGTGVMRSCPTAVELFKNVCERGRWSERLMSAY 187
Query: 273 GLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 308
+ +G+ AVV YL LA + E A + ++ Q+
Sbjct: 188 SSYKDGDSNAAVVQYLLLAEQGYEVAQSNAAFILDQK 224
>gi|338812695|ref|ZP_08624862.1| Sel1 domain-containing protein [Acetonema longum DSM 6540]
gi|337275319|gb|EGO63789.1| Sel1 domain-containing protein [Acetonema longum DSM 6540]
Length = 567
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 21/234 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV K+ A K A G A G+ Y+ AA+ ++QA
Sbjct: 168 GMAYYSGTGVTKDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGVAKDPAAAVKWWKQA 227
Query: 164 AVLGDPAA-----------QPANAE--EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ A+ N + EA+K +A+ G AQ L + + G+G+
Sbjct: 228 AGQGNVASLAMVGFAYHFGHGVNQDQAEALKWWRKAADKGDSDAQTMLGVAYYEGQGIAK 287
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +A +W+L+AA G + A ++ + Y GEG+P +H +A W ++AA+ G ++Q
Sbjct: 288 DQAQAIQWWLKAANQGQMLAQHHLAFAYYRGEGVPQNHAEAVIWWQKAAEKGEPESQTML 347
Query: 271 G----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
G LG T + KAV++ G A + V L +D A V
Sbjct: 348 GTAYFLGQGTTKDSKKAVMWWTKGAAQGNKVAQYYLGVALSTGDGIVKDEAAAV 401
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+LG+P Q A + L Q++ G +AQYQL L+ G+GV + +EAA+W+ ++A+
Sbjct: 28 ILGNPTGQAQAA--TIAELRQSAAKGDPQAQYQLGHILYLGQGVPRDYKEAAKWFKQSAD 85
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL-FTEGEMM-- 281
G A Y G G+ + +QA W +++AD G Q +H LG+ ++ G ++
Sbjct: 86 QGNSAAQTALGFAYMSGNGVEQNPKQAVYWWRKSAD--QGSMQAQHMLGVSYSSGYVVNK 143
Query: 282 ---KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
+AV + + + G AA + + + ++D+ +
Sbjct: 144 DAAEAVAWWQKSADQGFPAAQYFLGMAYYSGTGVTKDQTL 183
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQA 163
G + G GV +N +A+ + K A +GS A G+ Y + ++K A A++ ++++
Sbjct: 96 GFAYMSGNGVEQNPKQAVYWWRKSADQGSMQAQHMLGVSYSSGYVVNKDAAEAVAWWQKS 155
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G PAAQ + A + +A+ G+ AQ+++ + + G GV
Sbjct: 156 ADQGFPAAQYFLGMAYYSGTGVTKDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGVAK 215
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A +W+ +AA G V ++ Y FG G+ +A KW ++AAD G AQ
Sbjct: 216 DPAAAVKWWKQAAGQGNVASLAMVGFAYHFGHGVNQDQAEALKWWRKAADKGDSDAQTML 275
Query: 271 GLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
G+ + EG+ + +A+ + A G+ A H
Sbjct: 276 GVAYY-EGQGIAKDQAQAIQWWLKAANQGQMLAQH 309
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A I+ RQ+A GDP AQ P + +EA K Q++ G+ AQ L
Sbjct: 39 ATIAELRQSAAKGDPQAQYQLGHILYLGQGVPRDYKEAAKWFKQSADQGNSAAQTALGFA 98
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV+ N ++A W+ ++A+ G ++A + + YS G + +A W +++AD
Sbjct: 99 YMSGNGVEQNPKQAVYWWRKSADQGSMQAQHMLGVSYSSGYVVNKDAAEAVAWWQKSADQ 158
Query: 262 GHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
G AQ G+ ++ + K A ++ A G A H + ++D A
Sbjct: 159 GFPAAQYFLGMAYYSGTGVTKDQTLAFTWIRKAADNGYAPAQHRVGIHYYNGIGVAKDPA 218
Query: 318 MLV 320
V
Sbjct: 219 AAV 221
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 151 DKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQ 197
D KEAA ++Q+A G+ AAQ A N ++AV +++ G ++AQ+
Sbjct: 72 DYKEAA-KWFKQSADQGNSAAQTALGFAYMSGNGVEQNPKQAVYWWRKSADQGSMQAQHM 130
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L + G V+ + EA W+ ++A+ G+ A Y + Y G G+ A W+++
Sbjct: 131 LGVSYSSGYVVNKDAAEAVAWWQKSADQGFPAAQYFLGMAYYSGTGVTKDQTLAFTWIRK 190
Query: 258 AADCGHGKAQLEHGLGLFT 276
AAD G+ AQ G+ +
Sbjct: 191 AADNGYAPAQHRVGIHYYN 209
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 66/244 (27%)
Query: 78 LPQLRAASLVCKSWNDALR---PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
+PQ A +++ W A P + M+ G + G+G K+ KA+ + KGAA+
Sbjct: 321 VPQNHAEAVIW--WQKAAEKGEPESQTML----GTAYFLGQGTTKDSKKAVMWWTKGAAQ 374
Query: 135 GSTLAMVDAGLM----------------YWEMDKKEAAISLY---RQAAVLGDPAAQPAN 175
G+ +A G+ YW+ ++A I Y QA G A+ +
Sbjct: 375 GNKVAQYYLGVALSTGDGIVKDEAAAVSYWKKSAEQAYIPAYVGLGQAYYKGQGVAK--D 432
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD----------------------FNLQ 213
A+K +A G+ AQY L + + G+GVD F L
Sbjct: 433 YATAIKFYQKAMEKGNAAAQYHLGVAYYEGKGVDKSPKQAVKLWEPIANKGYALAQFALV 492
Query: 214 E--------------AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
E A W AAE G +A Y L Y+ G + +A KW+K++A
Sbjct: 493 EIVQDNLSVIDNYALAVVWRQDAAEKGNAQAQYYLGLAYANGWDVRQDRTEAVKWLKKSA 552
Query: 260 DCGH 263
G+
Sbjct: 553 QQGN 556
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G GV ++ +AL + K A +G + A G+ Y+E + K +A AI + +A
Sbjct: 240 GFAYHFGHGVNQDQAEALKWWRKAADKGDSDAQTMLGVAYYEGQGIAKDQAQAIQWWLKA 299
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ P N EAV +A+ G +Q L G+G
Sbjct: 300 ANQGQMLAQHHLAFAYYRGEGVPQNHAEAVIWWQKAAEKGEPESQTMLGTAYFLGQGTTK 359
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A W+ + A G A Y + S G+G+ A + K++A+ + A +
Sbjct: 360 DSKKAVMWWTKGAAQGNKVAQYYLGVALSTGDGIVKDEAAAVSYWKKSAEQAYIPAYVGL 419
Query: 271 GLGLFTEGEMMK----AVVYLELATRAGETAADH 300
G + + K A+ + + A G AA +
Sbjct: 420 GQAYYKGQGVAKDYATAIKFYQKAMEKGNAAAQY 453
>gi|451981484|ref|ZP_21929837.1| hypothetical protein, contains Sel1-like TPR repeats [Nitrospina
gracilis 3/211]
gi|451761272|emb|CCQ91099.1| hypothetical protein, contains Sel1-like TPR repeats [Nitrospina
gracilis 3/211]
Length = 220
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA K +++ G AQ+ + +C +G GV+ + Q+A WYL++AE GY A
Sbjct: 56 NKEEAFKWYLKSAEGGLPDAQHHVGVCYAKGFGVERDYQKAREWYLKSAENGYPLAFSKL 115
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-LGLFTEGEMMKAVVYLELATRA 293
L Y G G+P ++A KW K+ + + L +G + + EG V +L TRA
Sbjct: 116 GLVYLKGLGVPKDPQEAAKWYKQGVEKNVQSSLLTYGVMHMNGEGVERDYVKAYDLLTRA 175
Query: 294 ----GET----AADHVKNVILQQLSATSRDRAMLV-VDSWRAMP 328
G+T A + + ++ ++S +DRA + + SW P
Sbjct: 176 RRHGGDTDLARGARIMLDKLISKMSEEEKDRAGVSPIPSWIFDP 219
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+V AQ+ L G GV+ N +EA +WYL++AEGG A ++ +CY+ G G+ ++
Sbjct: 35 GNVLAQFDLGQSYRLGYGVEPNKEEAFKWYLKSAEGGLPDAQHHVGVCYAKGFGVERDYQ 94
Query: 250 QARKWMKRAADCGHGKAQLEHGL 272
+AR+W ++A+ G+ A + GL
Sbjct: 95 KAREWYLKSAENGYPLAFSKLGL 117
>gi|302878785|ref|YP_003847349.1| sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302581574|gb|ADL55585.1| Sporulation domain-containing protein [Gallionella
capsiferriformans ES-2]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L G F G+ V ++L + F A +G A + G+MY
Sbjct: 56 LNMGGIFCKGQEVEQDLAEGAKWFRLAAQQGLPQAQFNLGMMY----------------- 98
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+G AQ N EAVK A+ G V AQ L + G GV N EAARW AAE
Sbjct: 99 AVGQGVAQ--NPAEAVKWYRMAAEQGLVLAQTNLGVAYISGLGVARNEAEAARWIRLAAE 156
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ---LEHGLGLFTEGEMM 281
G +A +N + Y G+G+ ++ +A +W RAA GH A+ L+ L +E +
Sbjct: 157 KGETQAQFNLGVMYINGQGVDKNYAEANRWASRAAAQGHENARALMLDLNNRLKSEKSIE 216
Query: 282 KAV-----------VYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+ + YL+LA A+ + QL+ T ++ D W
Sbjct: 217 RPIDAGGETDNLTHYYLQLAAFKSNKEAEKYIEKMRAQLNPTGHTLSIFSTDGW 270
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
Q + +G+ V+ +L E A+W+ AA+ G +A +N + Y+ G+G+ + +A KW
Sbjct: 55 QLNMGGIFCKGQEVEQDLAEGAKWFRLAAQQGLPQAQFNLGMMYAVGQGVAQNPAEAVKW 114
Query: 255 MKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 310
+ AA+ G AQ G+ GL +A ++ LA GET A N+ + ++
Sbjct: 115 YRMAAEQGLVLAQTNLGVAYISGLGVARNEAEAARWIRLAAEKGETQAQF--NLGVMYIN 172
Query: 311 ATSRDRAMLVVDSW 324
D+ + W
Sbjct: 173 GQGVDKNYAEANRW 186
>gi|303284122|ref|XP_003061352.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457703|gb|EEH55002.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 439
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV NLD AL+ F K AA+G A V G + + ++ E A++ + +AA G
Sbjct: 5 GDNYRNGYGVEINLDTALEWFEKAAAKGHAGAQVGIGDVNYTKERYEDAVTWFTKAADQG 64
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
D A+ N + A+ +A+ GH AQ + + + ++
Sbjct: 65 DAEAEHRLGYCYQFGNGVELNLDTALAWFEKAAAKGHTGAQVGIGVVSYTKE----RYED 120
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A W+ +AA+ A CY FG G+ + A W ++AA GH Q G+
Sbjct: 121 AVTWFTKAADQHDTEAESWLGRCYQFGNGVEQNLDTALAWFEKAAAKGHADGQFGIGVVN 180
Query: 275 FTEGEMMKAVVYLELATRAGETAADHV 301
+T+ +AV + A GE+ A+ V
Sbjct: 181 YTKERYEEAVTWFTKAADQGESNAEFV 207
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ ++ G GV +NLD AL F K AA+G G++ + ++ E A++ + +AA G
Sbjct: 141 GRCYQFGNGVEQNLDTALAWFEKAAAKGHADGQFGIGVVNYTKERYEEAVTWFTKAADQG 200
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
+ A+ N + A++ +A+ GH AQ + + H+ +E
Sbjct: 201 ESNAEFVLGDCYRFGNGVEINLDTALEWYEKAAAKGHAGAQVGIGIVNHKKE----RYEE 256
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A W+ +AA+ G A CY G G+ L+ A +W ++AA GH Q+ G+
Sbjct: 257 AVTWFTKAADQGIADAELRLGHCYQLGNGVELNLDTAMEWYEKAAAKGHVNGQVNIGIVS 316
Query: 275 FTEGEMMKAVVYLELATRAGE 295
+ + AV + T+A E
Sbjct: 317 YKKERYEDAVTWF---TKAAE 334
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G ++ G GV NLD AL F K AA+G T A V G++ + ++ E A++ + +AA
Sbjct: 71 RLGYCYQFGNGVELNLDTALAWFEKAAAKGHTGAQVGIGVVSYTKERYEDAVTWFTKAAD 130
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
D A+ N + A+ +A+ GH Q+ + + +
Sbjct: 131 QHDTEAESWLGRCYQFGNGVEQNLDTALAWFEKAAAKGHADGQFGIGVVNYTKE----RY 186
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+EA W+ +AA+ G A + CY FG G+ ++ A +W +
Sbjct: 187 EEAVTWFTKAADQGESNAEFVLGDCYRFGNGVEINLDTALEWYE 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR G ++ G GV NLD A++ + K AA+G V+ G++ ++ ++ E A++ + +AA
Sbjct: 274 LRLGHCYQLGNGVELNLDTAMEWYEKAAAKGHVNGQVNIGIVSYKKERYEDAVTWFTKAA 333
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
D A+ N + A++ +A+ GH AQY + + ++
Sbjct: 334 EQHDADAERWLGHCYRFGNGVEQNFDTALEWYEKAAAKGHAGAQYGIGIVNYKKE----R 389
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+EA W+ +AA G A + CY G G+ +A +W +AA+
Sbjct: 390 YEEAVTWFTKAAAQGDTDAEVHLGDCYRKGRGVTRDIPKAIEWYTKAAE 438
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 32/137 (23%)
Query: 195 QYQLALCLHRGRGVDFNL--------------------------------QEAARWYLRA 222
+Y + G GV+ NL ++A W+ +A
Sbjct: 1 EYSIGDNYRNGYGVEINLDTALEWFEKAAAKGHAGAQVGIGDVNYTKERYEDAVTWFTKA 60
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A+ G A + CY FG G+ L+ A W ++AA GH AQ+ G+ +T+
Sbjct: 61 ADQGDAEAEHRLGYCYQFGNGVELNLDTALAWFEKAAAKGHTGAQVGIGVVSYTKERYED 120
Query: 283 AVVYLELATRAGETAAD 299
AV + A +T A+
Sbjct: 121 AVTWFTKAADQHDTEAE 137
>gi|303272473|ref|XP_003055598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463572|gb|EEH60850.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAM--VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
LP L+ ++ D PLR+ V + KR+ DKALD + +GA +G
Sbjct: 153 LPDAHFHGLLAQAGADLTTPLRQCNLGVFYKDAKRY----------DKALDWYHRGARQG 202
Query: 136 STLAMVDAGLMYWEMDKKE----AAISLYRQAAVLGDPAAQ---------PANAEEAVKL 182
+ G +Y + E A+ Y ++A G +AQ EEA K
Sbjct: 203 CPTCEHNIGHIYSDGHGVEQNIDTALEWYTKSAEKGHASAQNNVGGVHRKKGQHEEAFKW 262
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+A+ G + A+Y L +C G GV N+ EA +W+ +AAE G+ RA N
Sbjct: 263 FMKAANQGDIYAEYNLGICYENGNGVKRNVPEAVKWFTKAAEKGHPRAAEN 313
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%)
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY R A G +N YS G G+ + A +W ++A+ GH AQ G
Sbjct: 190 KALDWYHRGARQGCPTCEHNIGHIYSDGHGVEQNIDTALEWYTKSAEKGHASAQNNVGGV 249
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+G+ +A + A G+ A++ + + + R+
Sbjct: 250 HRKKGQHEEAFKWFMKAANQGDIYAEYNLGICYENGNGVKRN 291
>gi|339324242|ref|YP_004683935.1| hypothetical protein CNE_1c00850 [Cupriavidus necator N-1]
gi|338164399|gb|AEI75454.1| hypothetical protein CNE_1c00850 [Cupriavidus necator N-1]
Length = 234
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEA 179
N D+AL F A +G+ LA + +M L R AA+P +EA
Sbjct: 51 NFDQALRGFADAARQGNRLAQFNYAMM------------LLRGEGT----AARP---QEA 91
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ L +A+ + AQY RG V +L+EA RWY AA+GG+V+A + Y
Sbjct: 92 LVWLKKAADSQMTHAQYTWGDLYERGELVPKSLEEANRWYALAAQGGHVQAQMALATNYF 151
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRA 293
G G+P + QA W RAA G G AQ EHG + ++ +A ++ +
Sbjct: 152 TGRGVPRDYGQAFTWYSRAASAGDGGAQYIVGSFYEHGEPGVVDRDLEQAKIWYARSAAH 211
Query: 294 GETAA 298
G+ A
Sbjct: 212 GDPGA 216
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A + N ++A++ A+ G+ AQ+ A+ L RG G QEA W +AA+
Sbjct: 46 AYEAGNFDQALRGFADAARQGNRLAQFNYAMMLLRGEGTAARPQEALVWLKKAADSQMTH 105
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVV 285
A Y Y GE +P S +A +W AA GH +AQ+ FT + +A
Sbjct: 106 AQYTWGDLYERGELVPKSLEEANRWYALAAQGGHVQAQMALATNYFTGRGVPRDYGQAFT 165
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 331
+ A AG+ A ++ + DR + W A + H
Sbjct: 166 WYSRAASAGDGGAQYIVGSFYEHGEPGVVDRDLEQAKIWYARSAAH 211
>gi|237746353|ref|ZP_04576833.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377704|gb|EEO27795.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 320
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G+GV+ + RWY +AAE GY +A +N LCY FG G+ +A KW +++A+ H
Sbjct: 89 GQGVEKDASIGVRWYKKAAEQGYAKAQFNLGLCYQFGNGVKKDLNEAIKWFRKSAEQSHA 148
Query: 265 KAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
A+ + G G + +A+ + LA G+T+A + + Q + +D+
Sbjct: 149 DAEAKMGYLTVTGTGIRQDFQQAMKWYRLAAEHGDTSAYYQIGLFYAQGNGVKKDK 204
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKE--AAIS 158
V+ R G + +G+GV K+ + + K A +G A + GL Y + KK+ AI
Sbjct: 78 VMNRIGYMYDYGQGVEKDASIGVRWYKKAAEQGYAKAQFNLGLCYQFGNGVKKDLNEAIK 137
Query: 159 LYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
+R++A A+ + ++A+K A+ G A YQ+ L +G
Sbjct: 138 WFRKSAEQSHADAEAKMGYLTVTGTGIRQDFQQAMKWYRLAAEHGDTSAYYQIGLFYAQG 197
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + AA++Y+ AE G A Y Y G G+ +A W+K++A+ G+ +
Sbjct: 198 NGVKKDKNRAAQYYIMGAEKGDPEAQYWLGRAYEQGRGIKHDPERALYWLKQSANKGNWQ 257
Query: 266 AQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
A E L + ++ + +LA + GE A +
Sbjct: 258 AMRE--LSVIYGSALLGQAIDEKLALQWGEKAEE 289
>gi|222053397|ref|YP_002535759.1| Sel1 domain-containing protein repeat-containing protein [Geobacter
daltonii FRC-32]
gi|221562686|gb|ACM18658.1| Sel1 domain protein repeat-containing protein [Geobacter daltonii
FRC-32]
Length = 255
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 155 AAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
A + Y+ V DPA EA +A+ GH AQ+ L L G GV +L E
Sbjct: 65 AGVMHYKGEGVQRDPA-------EAAVWFQRAANGGHASAQFNLGLLYLNGEGVAKDLGE 117
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A W+ RAA G RA YN L Y+ G+G+ W + AA+ G+ KAQ+ G GL
Sbjct: 118 AFCWFSRAAAQGDARAQYNLGLMYARGDGVAEDMAATLNWFRLAAEQGYVKAQIYLG-GL 176
Query: 275 FTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ GE + +AV + +A T A V+ + +D
Sbjct: 177 YARGEGVEKDRREAVRWFRMAAEQESTEAQVYLGVMYTKGDGVEKD 222
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G GV+++ +A F + A G A + GL+Y + G+ A+
Sbjct: 72 GEGVQRDPAEAAVWFQRAANGGHASAQFNLGLLY-----------------LNGEGVAKD 114
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
EA +A+ G RAQY L L RG GV ++ W+ AAE GYV+A
Sbjct: 115 LG--EAFCWFSRAAAQGDARAQYNLGLMYARGDGVAEDMAATLNWFRLAAEQGYVKAQIY 172
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLE 288
Y+ GEG+ R+A +W + AA+ +AQ+ G+ ++T+G+ + +A +L
Sbjct: 173 LGGLYARGEGVEKDRREAVRWFRMAAEQESTEAQVYLGV-MYTKGDGVEKDNDEAAYWLN 231
Query: 289 LATRAGETAADHVKNVILQQLSATS 313
A R G A L++LSA +
Sbjct: 232 RAARKGSITAQR----YLEKLSAKT 252
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV K+L +A F + AA+G A + GLMY G
Sbjct: 102 GLLYLNGEGVAKDLGEAFCWFSRAAAQGDARAQYNLGLMY-----------------ARG 144
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A+ A + A+ G+V+AQ L RG GV+ + +EA RW+ AAE
Sbjct: 145 DGVAEDMAA--TLNWFRLAAEQGYVKAQIYLGGLYARGEGVEKDRREAVRWFRMAAEQES 202
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A + Y+ G+G+ + +A W+ RAA G AQ
Sbjct: 203 TEAQVYLGVMYTKGDGVEKDNDEAAYWLNRAARKGSITAQ 242
>gi|254805549|ref|YP_003083770.1| TPR repeat protein [Neisseria meningitidis alpha14]
gi|254669091|emb|CBA07650.1| TPR repeat protein [Neisseria meningitidis alpha14]
Length = 198
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + GRGVR++ +A+ F + A +G+TLA G MY
Sbjct: 48 GAMYYKGRGVRQDYVEAVRWFRQAAEQGNTLAQTLLGWMY-------------------A 88
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + EAVK QA+ G +AQY L + + GRGV + EAARW+ +AA+ G
Sbjct: 89 NGRGVRQDDTEAVKWYRQAAEQGLAQAQYNLGVMYNTGRGVRRDYAEAARWFRKAADQGL 148
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+A +N Y G G+ A++W+ +A G+
Sbjct: 149 AQAQFNLGAMYYKGRGVRQDLVLAQEWLGKACQNGN 184
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L ++GRGV + EA RW+ +AAE G A Y+ G G+ +A KW
Sbjct: 45 YNLGAMYYKGRGVRQDYVEAVRWFRQAAEQGNTLAQTLLGWMYANGRGVRQDDTEAVKWY 104
Query: 256 KRAADCGHGKAQLEHGL 272
++AA+ G +AQ G+
Sbjct: 105 RQAAEQGLAQAQYNLGV 121
>gi|237748455|ref|ZP_04578935.1| Sel1 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229379817|gb|EEO29908.1| Sel1 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 399
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A+ L G + G V K+ KA F + A G A + G Y++ D ++AA
Sbjct: 45 AIKLYNLGVEYAKGSRVEKDRKKANSYFRQAAEIGLPEAQYNLGRAYFDGDGLEVDRKAA 104
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
I Y++AA G AQ + + AV+ +A+ G V AQY L +
Sbjct: 105 IEWYKKAAEQGFAQAQYNLGVIYQNGLGIKQDFDSAVQWYERAANQGFVLAQYNLGMLYI 164
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G GV N + W +AAEGGY +A +N Y G G+ ++ +A +W +AA
Sbjct: 165 TGAGVGKNPKRGILWLRKAAEGGYGQAQHNLGTVYYEGIGVRKNYPEAVQWFAKAAKQEL 224
Query: 264 GKAQLEHGLGLFTEGEMMK 282
G AQ G+ + GE +K
Sbjct: 225 GMAQYNLGMAYY-HGEGVK 242
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
E K+E AI LY + + ++A QA+ G AQY L G G+
Sbjct: 38 EEAKRETAIKLYNLGVEYAKGSRVEKDRKKANSYFRQAAEIGLPEAQYNLGRAYFDGDGL 97
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + + A WY +AAE G+ +A YN + Y G G+ A +W +RAA+ G AQ
Sbjct: 98 EVDRKAAIEWYKKAAEQGFAQAQYNLGVIYQNGLGIKQDFDSAVQWYERAANQGFVLAQY 157
Query: 269 EHGLGLFTEGEMMK----AVVYLELATRAGETAADH 300
G+ T + K +++L A G A H
Sbjct: 158 NLGMLYITGAGVGKNPKRGILWLRKAAEGGYGQAQH 193
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GVRKN +A+ F K A + +A + G+ Y Y V
Sbjct: 196 GTVYYEGIGVRKNYPEAVQWFAKAAKQELGMAQYNLGMAY------------YHGEGVKK 243
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+P ++AV L +A+ + AQ L R NL E W +A+ G
Sbjct: 244 NP-------QKAVSWLKKAAKQNLLIAQASLGYIYVTDRNFKNNLAEGIFWTKKASAYGN 296
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMM 281
RA + Y G+G+ + + W+K+AA G+ AQ E+G+G+ + +++
Sbjct: 297 ARAQATLGIAYLIGKGVEKNIPEGVSWIKKAARQGNYPAQSMLASCYENGIGV-KQNKVL 355
Query: 282 KAVVYL 287
+YL
Sbjct: 356 AYALYL 361
>gi|355718374|gb|AES06245.1| sel-1 suppressor of lin-12-like protein [Mustela putorius furo]
Length = 591
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGD 168
GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+
Sbjct: 180 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 239
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
P Q N + A+K +A+ G V Q QL + G GV + ++A
Sbjct: 240 PVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQA 299
Query: 216 ARWYLRAAEGGYVRAMYNTSLCY-----SFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+++ A++GG++ A YN + + + G G+ S A + K + G +L
Sbjct: 300 LKYFNLASQGGHILAFYNLAQMHASGTGASGTGVMRSCHTAVELFKNVCERGRWSERLMT 359
Query: 271 GLGLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQQLSAT 312
+ +G+ AV+ YL LA + E A + IL Q AT
Sbjct: 360 AYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAA-FILDQREAT 401
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G GV + KAL + GA G+ +A + G YW + E+A++ YR
Sbjct: 55 GFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLV 114
Query: 164 A----------------------VLGDPAAQPANAEEAVKLLYQ-ASIAGHVRAQYQLA- 199
A + +P EE + YQ + G V+AQ L
Sbjct: 115 ANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQ 174
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRA 258
L LH GRGV+ N Q A ++ AA G AM YS G + P S+ A + K+A
Sbjct: 175 LHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKA 234
Query: 259 ADCGHGKAQLEHGLGL 274
AD G+ Q GLG+
Sbjct: 235 ADMGNPVGQ--SGLGM 248
>gi|393780227|ref|ZP_10368447.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608869|gb|EIW91703.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 278
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLCYY-----------YRKGV 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 104 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAAD 155
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF----TEGEM 280
+ A CY G G+ S A W ++AA+ G +AQ G F
Sbjct: 156 QDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGVPQSY 215
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 216 TKAIFWFEKAANQGDKEAQTI 236
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AAE G V++ LC
Sbjct: 37 EDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVSWYEKAAEQGDVKSQTKLGLC 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
SW + + + G + + +GV ++ +KA F K A +G A G+ Y +
Sbjct: 76 SWYEKAAEQGDVKSQTKLGLCYYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHK 135
Query: 150 ----MDKKEAAISLYRQAAVLGDPAAQP------------ANAEEAVKLLYQ-ASIAGHV 192
E A+ +++AA AQ A ++ L Y+ A+ G V
Sbjct: 136 GQGVKQSDEQAVLWFQKAADQDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDV 195
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ L +G+GV + +A W+ +AA G A CY G G+ S ++A
Sbjct: 196 EAQRNLGSYYFKGQGVPQSYTKAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAI 255
Query: 253 KWMKRAA 259
W ++
Sbjct: 256 YWFEKGC 262
>gi|290989033|ref|XP_002677163.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
gi|284090769|gb|EFC44419.1| Sel1 repeat domain-containing protein [Naegleria gruberi]
Length = 630
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 26/196 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G G+ ++ KA + + K A +A G ++ MD +E S
Sbjct: 86 GVLYEKGEGIEQSNTKAFEWYEKAANHNLAIAQYKLGRLF--MDGEEVEQS--------- 134
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGG 226
E A++ + +++ G+ AQ L +CL GV + Q++ RW+ +AA+ G
Sbjct: 135 --------DELAIEWIKKSAENGNFLAQNTLGNICLEGEYGVKQSYQDSKRWFKQAAKQG 186
Query: 227 YVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE---GEMMK 282
+ A YN L Y GEG + S+ +A KW K +A+ G+ +Q + L + E GE
Sbjct: 187 FAMAQYNLGLLYKNGEGDISQSYSKALKWFKLSAEQGYNASQ--YNLAILYEQVFGEFQL 244
Query: 283 AVVYLELATRAGETAA 298
AV Y A + G + A
Sbjct: 245 AVKYYTKAAKKGNSGA 260
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLA 139
V +S+ D+ R ++A M G +K+G G + ++ KAL F A +G +
Sbjct: 168 VKQSYQDSKRWFKQAAKQGFAMAQYNLGLLYKNGEGDISQSYSKALKWFKLSAEQGYNAS 227
Query: 140 MVDAGLMYWEM-DKKEAAISLYRQAAVLGDPAAQ--------------PANAEEAVKLLY 184
+ ++Y ++ + + A+ Y +AA G+ AQ P + E+A +
Sbjct: 228 QYNLAILYEQVFGEFQLAVKYYTKAAKKGNSGAQCDLGCIYASGGEGIPQSFEKAREYFE 287
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
++ GH AQ L + G GV+ + +EA +W+ ++A GG A Y
Sbjct: 288 MSANQGHSDAQLNLGVMYLNGDGVEKDNEEAIKWFRKSARGGNEEANY 335
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
N +A + +A+ + AQ+ + + +G G++ + +A WY +AA A Y
Sbjct: 61 GNYSKAFEWTEKAAHQDYPEAQFNVGVLYEKGEGIEQSNTKAFEWYEKAANHNLAIAQYK 120
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ GE + S A +W+K++A+ G+ AQ
Sbjct: 121 LGRLFMDGEEVEQSDELAIEWIKKSAENGNFLAQ 154
>gi|89902004|ref|YP_524475.1| AAA ATPase [Rhodoferax ferrireducens T118]
gi|89346741|gb|ABD70944.1| AAA ATPase [Rhodoferax ferrireducens T118]
Length = 839
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--- 149
D RP + + L G+R+ G GV K+ +A F A +G+ A + +
Sbjct: 21 DIFRPA-DIVAQLYLGRRYAKGTGVDKDEKEAAHWFRLAADKGNAEAQRNLAFAIFHGRG 79
Query: 150 MDKKEA-AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
+ + +A I R AA D AQ PA+ +EAV+ A+ V AQ
Sbjct: 80 VPRDDAEGIRRLRLAADGADAPAQRQLGYHFAIGHGVPADEKEAVRWFRLAADQNDVFAQ 139
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y LA L GRGV + +A WY AAE G A L Y G G+P+ + ++ W
Sbjct: 140 YNLAFALASGRGVPTDQSQAVHWYQLAAEQGMPEAQCALGLAYEHGLGVPVDYEKSVYWN 199
Query: 256 KRAADCGHGKA------QLEHGLGL 274
+ AA+ H ++ E+GLG+
Sbjct: 200 RLAAEQAHAESCSNLGWLYENGLGV 224
>gi|95930658|ref|ZP_01313392.1| Sel1 [Desulfuromonas acetoxidans DSM 684]
gi|95133310|gb|EAT14975.1| Sel1 [Desulfuromonas acetoxidans DSM 684]
Length = 563
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A L QA+ GH +AQ+++ C + + V N AA+W+ ++A GY A N
Sbjct: 140 KAFDLFSQAAHLGHAKAQFKVGYCYYFAKHVAKNPALAAQWFQKSANQGYAPAQANMGSL 199
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMK 282
YS G G+P A +W K+AAD GH + Q +GLG L+ G+ +K
Sbjct: 200 YSKGIGVPRDPTMAFEWFKKAADQGHPRGQ--NGLGHLYQTGKGVK 243
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 88/217 (40%), Gaps = 23/217 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQA 163
G ++ G+GV+KN A K A + A + GL Y W ++K YR+A
Sbjct: 233 GHLYQTGKGVKKNHQLAFSWIRKAALQNLKDAQYNLGLYYYSGWGIEKDLSEGTKWYRKA 292
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD + +A+ +A+ + + Y L G+GV+
Sbjct: 293 AEQGDVKGMRKMGAAYYWGHGVAQDYRQALSWYRKAAAQKDLPSYYALGRLYKEGKGVNR 352
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
N A WYL+AAE G+ + + + G G+ RQA +W K+AA+ G AQ
Sbjct: 353 NTTTAYNWYLKAAEQGHGDSQFQVASALFNGRGVAKDRRQAYQWYKKAAEQGDRYAQFSV 412
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAGETAADHV 301
E GLG E Y + A + E A V
Sbjct: 413 GLYYESGLGGIPESRQDALTWYRKAADQGHEKARQKV 449
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 17/179 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKK 153
L A + G + + V KN A F K A +G A + G +Y +
Sbjct: 151 LGHAKAQFKVGYCYYFAKHVAKNPALAAQWFQKSANQGYAPAQANMGSLYSKGIGVPRDP 210
Query: 154 EAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLAL 200
A +++AA G P Q N + A + +A++ AQY L L
Sbjct: 211 TMAFEWFKKAADQGHPRGQNGLGHLYQTGKGVKKNHQLAFSWIRKAALQNLKDAQYNLGL 270
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ G G++ +L E +WY +AAE G V+ M Y +G G+ +RQA W ++AA
Sbjct: 271 YYYSGWGIEKDLSEGTKWYRKAAEQGDVKGMRKMGAAYYWGHGVAQDYRQALSWYRKAA 329
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 17/182 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKEA-AISLYRQAAVL 166
F+ + ++L KA D F + A G A G Y+ + K A A ++++A
Sbjct: 128 FEGNDDITQDLAKAFDLFSQAAHLGHAKAQFKVGYCYYFAKHVAKNPALAAQWFQKSANQ 187
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ P + A + +A+ GH R Q L G+GV N Q
Sbjct: 188 GYAPAQANMGSLYSKGIGVPRDPTMAFEWFKKAADQGHPRGQNGLGHLYQTGKGVKKNHQ 247
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
A W +AA A YN L Y G G+ + KW ++AA+ G K + G
Sbjct: 248 LAFSWIRKAALQNLKDAQYNLGLYYYSGWGIEKDLSEGTKWYRKAAEQGDVKGMRKMGAA 307
Query: 274 LF 275
+
Sbjct: 308 YY 309
>gi|317050815|ref|YP_004111931.1| Sel1 domain-containing protein repeat-containing protein
[Desulfurispirillum indicum S5]
gi|316945899|gb|ADU65375.1| Sel1 domain protein repeat-containing protein [Desulfurispirillum
indicum S5]
Length = 329
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 98/225 (43%), Gaps = 23/225 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
++HG G+ + A + + A +G A +Y A Y +AA
Sbjct: 89 YQHGLGLAPSAQDAAIWYERAAQQGVAEAQEALAFLYATGSGLSRNIPRAFEWYEKAARQ 148
Query: 167 GDPAA------------QPANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+P A + + E V Y QA+ GH+ AQY LA L+ N
Sbjct: 149 GNPQAQFALAFLLAATLESDDVSEEVHSWYRQAAEQGHLLAQYNLA-TLYINEPQWRNET 207
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
EAARWY AA GY RA YN +L YS G G+ S +A W +RAA G A G
Sbjct: 208 EAARWYESAARQGYCRAQYNLALLYSQGLGIERSEERALYWYERAAQQGEPAAMNNLGAI 267
Query: 273 ---GLF-TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATS 313
G + E +++KA VY A A A +N +L+QL + +
Sbjct: 268 YANGFYGVEKDLVKAYVYFHRAAAAAHERARINRNALLEQLESEA 312
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G R+Q+ LA G G+ + Q+AA WY RAA+ G A + Y+ G GL +
Sbjct: 77 GDARSQWLLATLYQHGLGLAPSAQDAAIWYERAAQQGVAEAQEALAFLYATGSGLSRNIP 136
Query: 250 QARKWMKRAADCGH 263
+A +W ++AA G+
Sbjct: 137 RAFEWYEKAARQGN 150
>gi|326800209|ref|YP_004318028.1| Sel1 domain-containing protein repeat-containing protein
[Sphingobacterium sp. 21]
gi|326550973|gb|ADZ79358.1| Sel1 domain protein repeat-containing protein [Sphingobacterium sp.
21]
Length = 826
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N ++A+ QA+ AG+ R +LALC GV+F+ ++ ++AAE GY A Y
Sbjct: 545 NPDQALYYYQQAADAGYPRGLVELALCYEYEYGVNFDAEKVLNLMIKAAEQGYAFAQYKV 604
Query: 235 SLCY---SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ Y S GE +P++ QA W+ +AAD G+ A +E G
Sbjct: 605 GVYYMHGSLGEQIPINSEQAIMWLNKAADAGYPYAYVELG 644
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA-------- 155
G+ +++G N++KA F KG + ++ + MY + D K+A
Sbjct: 425 GRMYRYGIAGEINIEKAKAYFEKGVEQNIPFSITELAFMYEDGTLAQDYKKAFELFGKAA 484
Query: 156 ------AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A+ Y Q G + A E+A + + V Y+ C G GV+
Sbjct: 485 EGNSAYAMYCYGQYLQNGYNDGEKA-PEQAFYWFQKGAELQEVNCIYETGRCYRYGLGVE 543
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +A +Y +AA+ GY R + +LCY + G+ + M +AA+ G+ AQ +
Sbjct: 544 ENPDQALYYYQQAADAGYPRGLVELALCYEYEYGVNFDAEKVLNLMIKAAEQGYAFAQYK 603
Query: 270 HGL 272
G+
Sbjct: 604 VGV 606
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 135 GSTLAMVDAGLMYWEMDKKEAAI-SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVR 193
G +M +A Y+EM + I ++YR + EEA K + A+ G+V
Sbjct: 686 GIDYSMSEA-FKYYEMAANKNVIGAMYRLGNCYLNGNGVSEQPEEAYKWFFNAAQQGNVP 744
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
+QY L L +G+GV N +E W +AAE Y A Y CY G+GL + A
Sbjct: 745 SQYLLGKLLLKGKGVAMNKEEGIEWLQKAAEQQYAAAQYELGNCYLMGDGLEENEDNAMY 804
Query: 254 WMKRAADCGHGKA 266
W ++AA+ GH +A
Sbjct: 805 WFEQAAEKGHERA 817
>gi|421377856|ref|ZP_15827945.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421431311|ref|ZP_15880896.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421446885|ref|ZP_15896297.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|437139926|ref|ZP_20682190.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437155225|ref|ZP_20691444.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437807555|ref|ZP_20839817.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|445346559|ref|ZP_21418852.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445362751|ref|ZP_21424395.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|395997161|gb|EJI06202.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396053258|gb|EJI61755.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396062467|gb|EJI70880.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|435131331|gb|ELN18558.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435138093|gb|ELN25120.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435300875|gb|ELO76934.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|444877933|gb|ELY02066.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444883978|gb|ELY07830.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 509
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA+ G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAALQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAALQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|429755011|ref|ZP_19287692.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429175949|gb|EKY17361.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 815
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
VK L + + G V+AQ +LA +G+GV + QEA W + AE G ++A Y + CY
Sbjct: 23 VKKLIKLAEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLKAQYQLAQCYF 82
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 83 NGKGIPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 729 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 788
Query: 251 ARKWMKRAADCGHGKA 266
A W ++A D G KA
Sbjct: 789 AADWFEQACDNGEKKA 804
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
G+GV K+ KA++ K A G AM G Y+ Y + ++G
Sbjct: 224 EGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNFYF-----------YGNSPLIGK---- 268
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV-RAM 231
++A+ QA+ G+ AQ QLALC + G G + + ++A W L++ +A
Sbjct: 269 --YYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSVNTNPTPKAQ 326
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM--MKAVVYLE 288
N +CY+ G G S+ QA + ++AA+ G AQ G L EG++ K YLE
Sbjct: 327 NNLGVCYAVGIGAHPSNAQALESFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLE 385
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV L + + G ++AQYQLA C G+G+ + Q+ W + A+ G A +L
Sbjct: 56 QEAVVWLEKVAETGDLKAQYQLAQCYFNGKGIPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G+G+ S + +++ A+ + + QL+ + G ++ KA + E A++
Sbjct: 116 CYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASK 175
Query: 293 AGETAAD 299
G + A+
Sbjct: 176 NGNSEAE 182
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL---RAAEGGYVR 229
P + ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y + AE
Sbjct: 88 PKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIEKHAEKENPE 144
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
V L K + G GV K+++KA + + G++ A + +E++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEMLLASWAYEIN----------- 193
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
A+ P EA++ L Q + G+ AQ LA G+GV+ + +A +A
Sbjct: 194 -------ASNP----EAIERLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKA 242
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPL---SHRQARKWMKRAADCGH 263
A+GG AMY Y +G PL +++A + +AA+ G+
Sbjct: 243 AKGGDAEAMYQLGNFYFYGNS-PLIGKYYKKAINYYTQAANKGN 285
>gi|401827984|ref|XP_003888284.1| Sel1 repeat domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392999556|gb|AFM99303.1| Sel1 repeat domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 588
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQA 163
G F G GV KN + A++ F + + + A+ + G Y E E A +Y+ +
Sbjct: 174 GYCFLKGFGVEKNEEIAVELFRYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYKLS 233
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ + + AQ A + ++A + ++++ G+ Q LA C +G G
Sbjct: 234 SKMENSYAQNALGNCYEEGKGVDRDFQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKK 293
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA--DCGHGKAQL 268
LQ+A WY RAA G RA +N CY G G +A W K++A + H L
Sbjct: 294 CLQKAFEWYKRAAMQGLSRAKHNIGYCYQNGLGTSRCMSKAIYWYKQSASENNKHSIHAL 353
Query: 269 ----EHGLGLFTEGEMMKAVVYLELATRAG 294
+HG G+ + E+ AV Y +AG
Sbjct: 354 GVCYQHGYGVPKDEEL--AVRYFNEGAKAG 381
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM--DKK--EAAISLYRQA 163
G ++ G+GV ++ KA + + K A +G + Y + KK + A Y++A
Sbjct: 246 GNCYEEGKGVDRDFQKAFEFYKKSALQGYPSGQCNLAFCYQKGIGTKKCLQKAFEWYKRA 305
Query: 164 AVLGDPAAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ G A+ +A+ Q++ + + + L +C G GV
Sbjct: 306 AMQGLSRAKHNIGYCYQNGLGTSRCMSKAIYWYKQSASENNKHSIHALGVCYQHGYGVPK 365
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ + A R++ A+ G+ A+ + +LCY G G+ +S ++ MKRAA+ + AQ +
Sbjct: 366 DEELAVRYFNEGAKAGFDEAIISLALCYRSGTGVRISPEKSFSLMKRAAEMNNSSAQ--N 423
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSA 311
LG + E E ++ A R ET+A + L LS+
Sbjct: 424 TLGYYYE-EGFGTSRNIKEAVRWYETSAKQDNSWALFNLSS 463
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----------------MDKK 153
++ G GVR + +K+ + A ++ A G Y E K+
Sbjct: 393 YRSGTGVRISPEKSFSLMKRAAEMNNSSAQNTLGYYYEEGFGTSRNIKEAVRWYETSAKQ 452
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
+ + +L+ +++ + A P + + VKLL ++ G+ RA L C +G GV+ N +
Sbjct: 453 DNSWALFNLSSLYFNGAHGPPDEKLGVKLLSRSRDLGNPRAANTLGYCFEKGIGVEKNPK 512
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A Y +A GY +A YN CY G G + +A + RA+ G
Sbjct: 513 LAFEHYTQALMNGYSKAGYNLGRCYENGIGTGIDIDKALYYFYRASSAG 561
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HG GV K+ + A+ F +GA G A++ L Y + + +
Sbjct: 354 GVCYQHGYGVPKDEELAVRYFNEGAKAGFDEAIISLALCY----RSGTGVRI-------- 401
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ E++ L+ +A+ + AQ L G G N++EA RWY +A+
Sbjct: 402 -------SPEKSFSLMKRAAEMNNSSAQNTLGYYYEEGFGTSRNIKEAVRWYETSAKQDN 454
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A++N S Y G P + K + R+ D G+ +A E G+G+
Sbjct: 455 SWALFNLSSLYFNGAHGPPDEKLGVKLLSRSRDLGNPRAANTLGYCFEKGIGV 507
>gi|386389391|ref|ZP_10074207.1| Sel1 repeat protein [Haemophilus paraphrohaemolyticus HK411]
gi|385695770|gb|EIG26321.1| Sel1 repeat protein [Haemophilus paraphrohaemolyticus HK411]
Length = 219
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK +A+ G AQ L + GRGV + EA +WY +AAE GY +A +N
Sbjct: 83 EAVKWYRKAAEQGEANAQLNLGVMYDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLGNM 142
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
Y+ G+G+ +A KW ++AA+ G+ AQ+ G F
Sbjct: 143 YANGQGVKQDDVEAVKWYRKAAEQGNANAQMILGTVYF 180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA V G + +G+GV+++ +A+ + K A +G A ++ G+MY D
Sbjct: 60 EANVQFNLGVMYANGQGVKQDYFEAVKWYRKAAEQGEANAQLNLGVMY---DNGRGV--- 113
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
+Q V EAVK +A+ G+ +AQ+ L G+GV + EA +WY
Sbjct: 114 -KQDDV------------EAVKWYRKAAEQGYAKAQFNLGNMYANGQGVKQDDVEAVKWY 160
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+AAE G A Y G+G+ + A++W +A D G+
Sbjct: 161 RKAAEQGNANAQMILGTVYFLGKGVQFNKALAKEWFGKACDNGY 204
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G A Q ++ + A KL + G Q+ L + G+GV + EA +WY +AAE G
Sbjct: 36 GLSAYQQSDYQTAFKLWLPLAEQGEANVQFNLGVMYANGQGVKQDYFEAVKWYRKAAEQG 95
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
A N + Y G G+ +A KW ++AA+ G+ KAQ G ++ G+ +K
Sbjct: 96 EANAQLNLGVMYDNGRGVKQDDVEAVKWYRKAAEQGYAKAQFNLG-NMYANGQGVK 150
>gi|336452954|ref|YP_004607420.1| hypothetical protein HBZC1_07220 [Helicobacter bizzozeronii CIII-1]
gi|335332981|emb|CCB79708.1| hypothetical protein HBZC1_07220 [Helicobacter bizzozeronii CIII-1]
Length = 321
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 25/244 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-EMDKKE---AAISLYR 161
+ G + G+G K+L KA + K A G A V+ G MY + D E A+ ++
Sbjct: 62 KLGDIYSSGQGAHKDLYKAFKYYQKAADAGFAGAYVNLGTMYMSDQDGSEDYAKALKYFK 121
Query: 162 QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQ-LALCLHRGRG 207
+A LGD P + +A+ Y+ +I G + YQ LA + G+G
Sbjct: 122 KAVELGDALGYHNLALLYFQGLGVPRDFGKAL-YYYKKAINGGIIHSYQNLAKMYYSGQG 180
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + ++A +++ +AA+GG V A + Y G+G+ +R+A ++ K+A D G
Sbjct: 181 VAKDYKKALQYFQKAADGGIVEAYAGLGVMYKNGQGVRKDYRRALEYFKKAIDAGLVGVY 240
Query: 268 LEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVD 322
G+ ++ +G+ M KA+ Y ++A R G A + ++ DR M V
Sbjct: 241 NNIGM-MYLKGQGMKQDYAKALKYFKIAARVGVAGAYNNLGLVYANGLGVGVDRQMAYVY 299
Query: 323 SWRA 326
+A
Sbjct: 300 YQKA 303
>gi|206563106|ref|YP_002233869.1| hypothetical protein BCAM1255 [Burkholderia cenocepacia J2315]
gi|444359438|ref|ZP_21160750.1| Sel1 repeat protein [Burkholderia cenocepacia BC7]
gi|444368150|ref|ZP_21168012.1| Sel1 repeat protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039146|emb|CAR55110.1| putative exported protein [Burkholderia cenocepacia J2315]
gi|443601427|gb|ELT69569.1| Sel1 repeat protein [Burkholderia cenocepacia K56-2Valvano]
gi|443602049|gb|ELT70156.1| Sel1 repeat protein [Burkholderia cenocepacia BC7]
Length = 356
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
++HG GV +N +A + + A +G + + G +Y E + EA ++ YR+AA
Sbjct: 63 YEHGDGVEQNPAEAAKWYRRAADQGDAASQNNLGTLYETGVGVEQSRAEA-VNWYRRAAA 121
Query: 166 LGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G A P ++ EAV+L +A+ G R Q L L G GV +
Sbjct: 122 QGHGNALCNLGRAYEHGEGAPQDSAEAVRLYRRAAEQGLPRGQLYLGLMYDAGTGVPQDA 181
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EAA+WY RAA+ G +A Y G G+ S A W + AA+ G+ AQ + L
Sbjct: 182 AEAAKWYRRAADQGDPQAQNALGYLYDSGRGVKQSDIDAFNWYRLAAEQGYANAQ--NNL 239
Query: 273 GLFTE 277
GL E
Sbjct: 240 GLMYE 244
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G GV ++ +A++ + + AA+G A+ + G Y D EA + LYR+
Sbjct: 96 GTLYETGVGVEQSRAEAVNWYRRAAAQGHGNALCNLGRAYEHGEGAPQDSAEA-VRLYRR 154
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G P Q P +A EA K +A+ G +AQ L GRGV
Sbjct: 155 AAEQGLPRGQLYLGLMYDAGTGVPQDAAEAAKWYRRAADQGDPQAQNALGYLYDSGRGVK 214
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY AAE GY A N L Y G+G+ +A KW + AA G +
Sbjct: 215 QSDIDAFNWYRLAAEQGYANAQNNLGLMYESGQGVRQDDVEAVKWYRLAAAQGVATSLFR 274
Query: 270 HGLGLFTEG 278
G+ ++ G
Sbjct: 275 LGVQYYSGG 283
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G + ++ +AL G GV+ N EAA+WY RAA+ G + N Y G G+ S
Sbjct: 51 GDLDGEFDVALMYEHGDGVEQNPAEAAKWYRRAADQGDAASQNNLGTLYETGVGVEQSRA 110
Query: 250 QARKWMKRAADCGHGKA------QLEHGLG 273
+A W +RAA GHG A EHG G
Sbjct: 111 EAVNWYRRAAAQGHGNALCNLGRAYEHGEG 140
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 19/158 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAIS 158
L G+ ++HG G ++ +A+ + + A +G + GLMY D EAA
Sbjct: 128 LCNLGRAYEHGEGAPQDSAEAVRLYRRAAEQGLPRGQLYLGLMYDAGTGVPQDAAEAA-K 186
Query: 159 LYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
YR+AA GDP AQ A + +A A+ G+ AQ L L G
Sbjct: 187 WYRRAADQGDPQAQNALGYLYDSGRGVKQSDIDAFNWYRLAAEQGYANAQNNLGLMYESG 246
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+GV + EA +WY AA G +++ + Y G G
Sbjct: 247 QGVRQDDVEAVKWYRLAAAQGVATSLFRLGVQYYSGGG 284
>gi|299068408|emb|CBJ39632.1| conserved exported protein of unknown function (tetratricopeptide
repeats) [Ralstonia solanacearum CMR15]
Length = 252
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEE 178
+A+D F + A RG+ LA + +M L R + P E
Sbjct: 59 NEFGRAIDEFAEAAQRGNRLAQFNYAMM------------LMRGEGTVAQP-------EA 99
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AVK L +A+ AQ+ RG V +L EA +WY RAA GG++ A + Y
Sbjct: 100 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNY 159
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G G+P + +A W K+AA+ G G +Q
Sbjct: 160 FTGRGVPRDYGRAFTWYKKAAEAGDGPSQ 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+ +A+ G+ AQ+ A+ L RG G + A +W RAA+ A + +
Sbjct: 64 AIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELF 123
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAG 294
GE +P S +A KW +RAA GH +AQ FT + +A + + A AG
Sbjct: 124 ERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFTGRGVPRDYGRAFTWYKKAAEAG 183
Query: 295 ETAADHV 301
+ + ++
Sbjct: 184 DGPSQYI 190
>gi|188587674|ref|YP_001921040.1| Sel1 repeat family [Clostridium botulinum E3 str. Alaska E43]
gi|188497955|gb|ACD51091.1| Sel1 repeat family [Clostridium botulinum E3 str. Alaska E43]
Length = 269
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G + ++ ++A+ ++K A +G +A + G MY+ G
Sbjct: 45 GDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLGDMYY-----------------CG 87
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ Q + E+A + ++ G+ AQ LA G G + N QEA +WY +AA
Sbjct: 88 NGVDQ--DYEKAKEYFGYSASQGNPDAQCNLACMYEEGLGTEINYQEAIKWYEKAALQED 145
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMM 281
A YN Y +G+G+ + +++A KW +A+ G+ K+Q E GLG+ E
Sbjct: 146 FYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASILGYEKSQNTLGYMYEQGLGI--EKNYE 203
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+AV Y + A + A++ + + ++DR
Sbjct: 204 EAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDR 238
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV ++ +KA + F A++G+ A + MY E++ +EA I Y +
Sbjct: 81 GDMYYCGNGVDQDYEKAKEYFGYSASQGNPDAQCNLACMYEEGLGTEINYQEA-IKWYEK 139
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA+ D AQ + ++A K +ASI G+ ++Q L +G G++
Sbjct: 140 AALQEDFYAQYNLGNLYMYGKGVDIDYKKAFKWHMKASILGYEKSQNTLGYMYEQGLGIE 199
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA ++Y +AA Y A YN + Y G G+ + A W ++AA+ G KA
Sbjct: 200 KNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKAAYIWYQKAANQGLKKA 256
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+AQ L + G + + +EA +WY+++AE GY A YN Y G G+ + +A+
Sbjct: 39 KAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVDQDYEKAK 98
Query: 253 KWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 290
++ +A G+ AQ E GLG TE +A+ + E A
Sbjct: 99 EYFGYSASQGNPDAQCNLACMYEEGLG--TEINYQEAIKWYEKA 140
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
++ G G N +A+ + K A + A + G +Y ++D K+A + +A++
Sbjct: 120 YEEGLGTEINYQEAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKKA-FKWHMKASI 178
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG +Q N EEAVK +A+ + A+Y LA + G G+ +
Sbjct: 179 LGYEKSQNTLGYMYEQGLGIEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDR 238
Query: 213 QEAARWYLRAAEGGYVRAM 231
+ A WY +AA G +A+
Sbjct: 239 KAAYIWYQKAANQGLKKAI 257
>gi|17544743|ref|NP_518145.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17427032|emb|CAD13552.1| putative signal peptide protein [Ralstonia solanacearum GMI1000]
Length = 252
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEE 178
+A+D F + A RG+ LA + +M L R + P E
Sbjct: 59 NEFGRAIDEFAEAAQRGNRLAQFNYAMM------------LMRGEGTVAQP-------EA 99
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AVK L +A+ AQ+ RG V +L EA +WY RAA GG++ A + Y
Sbjct: 100 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNY 159
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G G+P + +A W K+AA+ G G +Q
Sbjct: 160 FTGRGVPRDYGRAFTWYKKAAEAGDGPSQ 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+ +A+ G+ AQ+ A+ L RG G + A +W RAA+ A + +
Sbjct: 64 AIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELF 123
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAG 294
GE +P S +A KW +RAA GH +AQ FT + +A + + A AG
Sbjct: 124 ERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFTGRGVPRDYGRAFTWYKKAAEAG 183
Query: 295 ETAADHV 301
+ + ++
Sbjct: 184 DGPSQYI 190
>gi|425745584|ref|ZP_18863628.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
gi|425488592|gb|EKU54927.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
Length = 196
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
++LG +A+ L Q + G AQY LA G GV+ + +A WYL AA
Sbjct: 15 SLLGTSPVLALGVTDAINTLTQNAEQGDSEAQYSLATMYADGDGVEQDNAKAVHWYLMAA 74
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGE 279
+ G V A N + Y G+G+ +H++A +W +RAA G AQ G+ G +
Sbjct: 75 DQGNVNAQNNLAWMYENGKGIAQNHKKAFEWYQRAAHQGDSNAQYNLGVMYAHGRGVQKN 134
Query: 280 MMKAVVYLELATRAGETAADHV--KNVILQQLSATSRDRAMLVVDSW 324
KA + A G+ A H + +L+QL + + ++ W
Sbjct: 135 NNKAHQWYFKAAEQGDLDAQHYLRMSYLLKQLDQAGQKKYKMISKDW 181
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
E EA SL A + D + +AV A+ G+V AQ LA G+G+
Sbjct: 39 EQGDSEAQYSL---ATMYADGDGVEQDNAKAVHWYLMAADQGNVNAQNNLAWMYENGKGI 95
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N ++A WY RAA G A YN + Y+ G G+ ++ +A +W +AA+ G AQ
Sbjct: 96 AQNHKKAFEWYQRAAHQGDSNAQYNLGVMYAHGRGVQKNNNKAHQWYFKAAEQGDLDAQ 154
>gi|389691453|ref|ZP_10180247.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
gi|388588436|gb|EIM28726.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
Length = 1058
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A +L + + AG AQ +LA+ +G G+ +L++AA WY RAA GG +R+M+N +
Sbjct: 878 AARLFERVAQAGLPPAQERLAMMHEKGEGIPLDLKQAAFWYERAALGGNIRSMHNLATVL 937
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
+ G+ + A +W AA+ G +Q G+ G+ + + KA + LA G
Sbjct: 938 ASGKNGKPDYAAALRWYAEAAEYGLRDSQYNLGILLARGIGAKPDRSKAYQWFSLAADQG 997
Query: 295 ETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
+T A + I +S A + V+ WR
Sbjct: 998 DTEAVQKREEIAVFMSQAELKAAKVAVELWR 1028
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
L A + G P PA+ L A+++G A Y++A GRG+ + + AAR
Sbjct: 829 LVDPATIDGIPVDTPAS-------LQHAALSGDAAALYEIASRAAEGRGMARDTKAAARL 881
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ R A+ G A ++ + GEG+PL +QA W +RAA G+
Sbjct: 882 FERVAQAGLPPAQERLAMMHEKGEGIPLDLKQAAFWYERAALGGN 926
>gi|323453470|gb|EGB09341.1| hypothetical protein AURANDRAFT_23899, partial [Aureococcus
anophagefferens]
Length = 274
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 47/218 (21%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANA---------EEAVKLLYQASIAGHVRAQYQLA 199
++DKK+AA L+R AA GD +AQ A EA++ +A+ G AQY LA
Sbjct: 33 KLDKKKAA-QLWRMAADRGDASAQQNVALVYFNAGRFAEAIRFYKRAAEQGLSDAQYSLA 91
Query: 200 LCLHRGRGVDFNLQEAARWY------------------------------------LRAA 223
+C +G+G + +L EA RWY RAA
Sbjct: 92 VCFEQGKGTEVDLAEAKRWYRKGVDRGEAQSRNNLAGLLGAEGRHRESFELAAELYERAA 151
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
E G V AM N + G+G+ + + + AAD G AQL+ G L +G+ +A
Sbjct: 152 ELGEVHAMVNLGMLLRTGDGVNQDREKMFQLYRSAADRGFAWAQLKLGSELHQDGKDEEA 211
Query: 284 VVYLELATRAGETAADHVKNVILQQL-SATSRDRAMLV 320
+L+L+ G A+ L L +DRA +
Sbjct: 212 FPFLKLSAEQGNATAELFVGYYLSGLWPGVPQDRAEAI 249
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+++A+ + RA E G V AM N + Y GEG+ L ++A + + AAD G AQ L
Sbjct: 1 KKSAKLFKRAVELGNVDAMSNLAHLYDNGEGVKLDKKKAAQLWRMAADRGDASAQQNVAL 60
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
F G +A+ + + A G + A + V +Q T D A
Sbjct: 61 VYFNAGRFAEAIRFYKRAAEQGLSDAQYSLAVCFEQGKGTEVDLA 105
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 36/176 (20%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN------------------------- 211
+++ KL +A G+V A LA G GV +
Sbjct: 1 KKSAKLFKRAVELGNVDAMSNLAHLYDNGEGVKLDKKKAAQLWRMAADRGDASAQQNVAL 60
Query: 212 -------LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
EA R+Y RAAE G A Y+ ++C+ G+G + +A++W ++ D G
Sbjct: 61 VYFNAGRFAEAIRFYKRAAEQGLSDAQYSLAVCFEQGKGTEVDLAEAKRWYRKGVDRGEA 120
Query: 265 KAQLEHGLGLFTEGEMMKAV-VYLELATRAGETAADHVK---NVILQQLSATSRDR 316
+++ L EG ++ + EL RA E H ++L+ ++DR
Sbjct: 121 QSRNNLAGLLGAEGRHRESFELAAELYERAAELGEVHAMVNLGMLLRTGDGVNQDR 176
>gi|261216267|ref|ZP_05930548.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917874|gb|EEX84735.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
Tulya]
Length = 942
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G AM
Sbjct: 694 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGNASAM 753
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 754 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 813
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V W+A P
Sbjct: 814 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVKLWKAKP 854
>gi|440792477|gb|ELR13698.1| Sel1 repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 130 KGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQ------------- 172
K A++G A GLMY E E A++ +R+AA G+ AQ
Sbjct: 202 KAASQGHREAQFSLGLMYKEGRSVAQSDELAVAWWRKAAHQGEFNAQSHLGYMYEKGRGV 261
Query: 173 --PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P++ E A +A+I GH AQY LA +GRGV N EAA WYL++A G A
Sbjct: 262 ERPSDVE-AAAWYRRAAIQGHSSAQYNLAGLCRQGRGVAQNNSEAATWYLQSARQGLALA 320
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
++ G G+ S+ +A W +AA GH AQ E G
Sbjct: 321 QFHLGCMCHDGVGVAQSYEEAVAWWSKAALQGHIGAQYELG 361
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 21/190 (11%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKK 153
REA L G +K GR V ++ + A+ + K A +G A G MY E
Sbjct: 209 REAQFSL--GLMYKEGRSVAQSDELAVAWWRKAAHQGEFNAQSHLGYMYEKGRGVERPSD 266
Query: 154 EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
A + YR+AA+ G +AQ N EA Q++ G AQ+ L
Sbjct: 267 VEAAAWYRRAAIQGHSSAQYNLAGLCRQGRGVAQNNSEAATWYLQSARQGLALAQFHLGC 326
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAA 259
H G GV + +EA W+ +AA G++ A Y Y G G+P AR+W+ AA
Sbjct: 327 MCHDGVGVAQSYEEAVAWWSKAALQGHIGAQYELGCLYKAGRAGVPQDIALARRWLSAAA 386
Query: 260 DCGHGKAQLE 269
G+ +AQ E
Sbjct: 387 SKGYPEAQAE 396
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK + G GV +N D+ L + K +G+ A G +Y ++ + AA L
Sbjct: 148 GKMYAGGFGVERNADEVLTWWAKAVRQGNKQAQYHLGRLY-------ESVGVVTTAAQLT 200
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AA GH AQ+ L L GR V + + A W+ +AA G
Sbjct: 201 EKAASQ----------------GHREAQFSLGLMYKEGRSVAQSDELAVAWWRKAAHQGE 244
Query: 228 VRAMYNTSLCYSFGEGLP-LSHRQARKWMKRAADCGHGKAQ 267
A + Y G G+ S +A W +RAA GH AQ
Sbjct: 245 FNAQSHLGYMYEKGRGVERPSDVEAAAWYRRAAIQGHSSAQ 285
>gi|429745684|ref|ZP_19279087.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429168386|gb|EKY10223.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 278
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYY-----------YRKGV 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 104 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSNEQAVLWFQKAAD 155
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EM 280
+ A CY G G+ S A W ++AA+ G +AQ G F +G
Sbjct: 156 QDFAEAQSFLGYCYYKGLGVAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSY 215
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 216 TKAIFWFEKAANQGDKEAQTI 236
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AAE G V++ LC
Sbjct: 37 EDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLC 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ + +GV ++ +KA F K A +G A G+ Y + E A+ +++AA
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSNEQAVLWFQKAADQ 156
Query: 167 GDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ + +AV +A+ G V AQ L +G+G+ +
Sbjct: 157 DFAEAQSFLGYCYYKGLGVAQSDSDAVFWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYT 216
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+A W+ +AA G A CY G G+ S ++A W ++
Sbjct: 217 KAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAIYWFEKGC 262
>gi|408906728|emb|CCM12089.1| hypothetical protein [Helicobacter heilmannii ASB1.4]
Length = 568
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKK 153
++A L G + G G+ K+ KAL+ F K A G A + G++Y + D
Sbjct: 339 QKAQTLYNLGVVYASGDGMPKDEKKALEYFKKAANLGYAKAYYNLGVIYSGGLGVKQDYA 398
Query: 154 EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
+A +++AA LG+ A + +A++ QA G+ A + L
Sbjct: 399 KA-FECFQEAAKLGEAKAYYNLGLMCEYAKGVEKSMPQAIRYYKQAGALGNASAMHHLGT 457
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
H G+ V + Q+A ++ AA G V+ YN + YS GEG+ + RQA + ++AA+
Sbjct: 458 LYHVGKAVLKDPQKAFSYFREAARLGSVKDCYNLGVLYSKGEGIERNTRQALDYFEQAAN 517
Query: 261 CGHGKAQLEHGLGLFTEGEM 280
G A G+ L+ +GEM
Sbjct: 518 LGSSDAMYNMGV-LYYQGEM 536
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQAAVL 166
F+ G+GV + KA++ + K A GS A+V G M++E M K A+ +++AA L
Sbjct: 152 FRTGKGVGVDYQKAIEYYKKAANLGSVKALVSLGTMHYEGQGMAKNSTKALDYFKEAAKL 211
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GD +A Y LA+ + G+G+ N +A + AA+ G
Sbjct: 212 GDA-----------------------KAFYNLAIMVESGQGMAKNSTKALEFLKEAAKLG 248
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ +A Y + Y GEG+ + ++A K + A G +A
Sbjct: 249 FAKATYTLAAMYEIGEGVDQNMKEAIKLYQEAGSMGDSEA 288
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK---- 153
L A L+ G + G+GV KN DKAL F + A G + V+ G+MY ++ +
Sbjct: 67 LGSARALVGLGVVYAGGKGVEKNDDKALHYFQQAADLGDSQGYVNLGVMY-DLGRGVKRD 125
Query: 154 -EAAISLYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLA 199
+ A+ +++AA L D A + ++A++ +A+ G V+A L
Sbjct: 126 CQKALYYFQKAADLEDIHALNHIALIFRTGKGVGVDYQKAIEYYKKAANLGSVKALVSLG 185
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ G+G+ N +A ++ AA+ G +A YN ++ G+G+ + +A +++K AA
Sbjct: 186 TMHYEGQGMAKNSTKALDYFKEAAKLGDAKAFYNLAIMVESGQGMAKNSTKALEFLKEAA 245
Query: 260 DCGHGKA 266
G KA
Sbjct: 246 KLGFAKA 252
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 17/235 (7%)
Query: 74 ASFTLPQL-RAASLVCKSWNDALRPLREA------MVLLRWGKRFKHGRG-VRKNLDKAL 125
A++TL + V ++ +A++ +EA L ++ GRG V ++ KAL
Sbjct: 252 ATYTLAAMYEIGEGVDQNMKEAIKLYQEAGSMGDSEALCSLATLYRTGRGGVEQDKFKAL 311
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ 185
+ + A G AM + M + ++ A +LY V P + ++A++ +
Sbjct: 312 AYYQQAADLGDVNAMGNLNAM-EDQTVEQKAQTLYNLGVVYASGDGMPKDEKKALEYFKK 370
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G+ +A Y L + G GV + +A + AA+ G +A YN L + +G+
Sbjct: 371 AANLGYAKAYYNLGVIYSGGLGVKQDYAKAFECFQEAAKLGEAKAYYNLGLMCEYAKGVE 430
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM-----KAVVYLELATRAG 294
S QA ++ K+A G+ A H LG L+ G+ + KA Y A R G
Sbjct: 431 KSMPQAIRYYKQAGALGNASAM--HHLGTLYHVGKAVLKDPQKAFSYFREAARLG 483
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 37/186 (19%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
AL++F A GS A+V G++Y + D K A+ ++QAA LGD
Sbjct: 57 ALENFTNAANLGSARALVGLGVVYAGGKGVEKNDDK--ALHYFQQAADLGDSQ------- 107
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
G+V L + GRGV + Q+A ++ +AA+ + A+ + +L
Sbjct: 108 ------------GYVN----LGVMYDLGRGVKRDCQKALYYFQKAADLEDIHALNHIALI 151
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATR 292
+ G+G+ + +++A ++ K+AA+ G KA + G + EG+ M KA+ Y + A +
Sbjct: 152 FRTGKGVGVDYQKAIEYYKKAANLGSVKALVSLGT-MHYEGQGMAKNSTKALDYFKEAAK 210
Query: 293 AGETAA 298
G+ A
Sbjct: 211 LGDAKA 216
>gi|297171597|gb|ADI22593.1| FOG: TPR repeat, SEL1 subfamily [uncultured verrucomicrobium
HF0500_16O23]
Length = 275
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 26/194 (13%)
Query: 70 NKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFL 129
N++ +T +L L DA + A + GRGV + +AL +
Sbjct: 32 NQVKVRYTPKELFQVDLTMAEQGDAKAQTKTA-------DNYAVGRGVEVDFQEALKWYR 84
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA 189
K AA+ + A + G MY+ + A P + ++AV+ +++
Sbjct: 85 KAAAQNESQAQYNLGYMYYNGE-------------------ALPRDYQKAVEWFIKSAEQ 125
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ L L G GV + A +WY +AA G A +N Y GEG+P +
Sbjct: 126 GNAGAQCNLGLMYDNGEGVPQDNATAIKWYRKAAIQGEPMAQFNMGWMYDNGEGIPENDT 185
Query: 250 QARKWMKRAADCGH 263
+A +W ++A GH
Sbjct: 186 KALEWYVKSARGGH 199
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EA+K +A+ +AQY L + G + + Q+A W++++AE G A N L
Sbjct: 77 QEALKWYRKAAAQNESQAQYNLGYMYYNGEALPRDYQKAVEWFIKSAEQGNAGAQCNLGL 136
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELAT 291
Y GEG+P + A KW ++AA G AQ G ++ GE + KA+ + +
Sbjct: 137 MYDNGEGVPQDNATAIKWYRKAAIQGEPMAQFNMGW-MYDNGEGIPENDTKALEWYVKSA 195
Query: 292 RAGETAADHVKNVILQQLSATSRD 315
R G + + ++ T D
Sbjct: 196 RGGHIESPNYIGILYDNGDGTPED 219
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 181 KLLYQASIA----GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
K L+Q + G +AQ + A GRGV+ + QEA +WY +AA +A YN
Sbjct: 41 KELFQVDLTMAEQGDAKAQTKTADNYAVGRGVEVDFQEALKWYRKAAAQNESQAQYNLGY 100
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y GE LP +++A +W ++A+ G+ AQ GL ++ GE
Sbjct: 101 MYYNGEALPRDYQKAVEWFIKSAEQGNAGAQCNLGL-MYDNGE 142
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 23/142 (16%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA--- 155
E+ G + +G + ++ KA++ F+K A +G+ A + GLMY D E
Sbjct: 90 NESQAQYNLGYMYYNGEALPRDYQKAVEWFIKSAEQGNAGAQCNLGLMY---DNGEGVPQ 146
Query: 156 ----AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQL 198
AI YR+AA+ G+P AQ P N +A++ +++ GH+ + +
Sbjct: 147 DNATAIKWYRKAAIQGEPMAQFNMGWMYDNGEGIPENDTKALEWYVKSARGGHIESPNYI 206
Query: 199 ALCLHRGRGVDFNLQEAARWYL 220
+ G G + A W+L
Sbjct: 207 GILYDNGDGTPEDDIAAYAWWL 228
>gi|51244078|ref|YP_063962.1| TPR repeat-containing protein [Desulfotalea psychrophila LSv54]
gi|50875115|emb|CAG34955.1| related to TPR repeat proteins [Desulfotalea psychrophila LSv54]
Length = 355
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 67 DVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH------------- 113
++ +I A Q R SL KS D+ + ++A + R H
Sbjct: 33 EIAQEIQAVNAETQFRLGSLYHKSTADS-KDQQKAFSWFQKSARLGHAGAQYQLAVMYYQ 91
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISL--------- 159
G+G K+L KA K A +G A G+MY++ D K A L
Sbjct: 92 GKGTLKDLKKAFTWLKKSAQQGDASAQYQLGIMYYQGKGMIKDPKRAFYWLEKSAQQGDG 151
Query: 160 ---YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
Y+ AA+ + P + + + + +++ GH AQ++L + +RG G + + A
Sbjct: 152 NAQYQLAAMYHNGEGTPRSPIQELSWVEKSARQGHRAAQFRLGVMYYRGEGTPKDPKRAL 211
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
W ++A G A Y + Y G+G ++A W K++A GH AQ + G ++
Sbjct: 212 PWVEKSARQGNAMAQYQLAAMYHTGKGTLKDAKRAFFWFKKSARQGHRAAQYQLG-DMYY 270
Query: 277 EGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
GE +A ++E + R G+ AA + V+ T++D
Sbjct: 271 RGEGTLKDQERAFSWVEKSARQGDRAAQYQLAVMYYLGKGTAKD 314
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 17/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA---------- 155
+ +G G ++ + L K A +G A G+MY+ D K A
Sbjct: 161 YHNGEGTPRSPIQELSWVEKSARQGHRAAQFRLGVMYYRGEGTPKDPKRALPWVEKSARQ 220
Query: 156 --AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A++ Y+ AA+ +A+ A +++ GH AQYQL +RG G + +
Sbjct: 221 GNAMAQYQLAAMYHTGKGTLKDAKRAFFWFKKSARQGHRAAQYQLGDMYYRGEGTLKDQE 280
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A W ++A G A Y ++ Y G+G ++A W +++A GH AQ
Sbjct: 281 RAFSWVEKSARQGDRAAQYQLAVMYYLGKGTAKDLKRAFSWFEKSAKQGHRAAQ 334
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLY 160
AM + + G+G K+ +A F K A +G A G MY Y
Sbjct: 223 AMAQYQLAAMYHTGKGTLKDAKRAFFWFKKSARQGHRAAQYQLGDMY------------Y 270
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
R L D E A + +++ G AQYQLA+ + G+G +L+ A W+
Sbjct: 271 RGEGTLKDQ-------ERAFSWVEKSARQGDRAAQYQLAVMYYLGKGTAKDLKRAFSWFE 323
Query: 221 RAAEGGYVRAMYNTSLCYSFGEG 243
++A+ G+ A + GEG
Sbjct: 324 KSAKQGHRAAQRQLRVMSYKGEG 346
>gi|5852329|gb|AAD54009.1|AF088857_1 hypothetical protein [Vogesella indigofera]
Length = 268
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA- 155
+A R G R++ G GV ++ KA + + A +G A + ++Y +++ +A
Sbjct: 44 DANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDAE 103
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A++ +R+AA G AQ P N +EAV +A+ G + A Y LA+ +
Sbjct: 104 ALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIMM 163
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GRG+ + A + + AE G A N L Y G G+ ++ A W+++
Sbjct: 164 REGRGLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQDYQLALSWLRKGVAQK 223
Query: 263 HGKAQLEHGLGLFTEGEMM-----KAVVYLELATRA 293
AQ G+ L+ EG+ + +AVV+ LA A
Sbjct: 224 SAMAQANLGV-LYLEGKGVAQDDNEAVVWFRLAAGA 258
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ++L + +G GV + +AA WY +AA G A N ++ Y G+G+ +
Sbjct: 43 GDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDA 102
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A W ++AA G +AQL G G T +AVV+ A G+ AD+ ++
Sbjct: 103 EALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIM 162
Query: 306 LQQLSATSRDRAMLV 320
+++ +D A V
Sbjct: 163 MREGRGLPQDDAAAV 177
>gi|93006436|ref|YP_580873.1| hypothetical protein Pcryo_1612 [Psychrobacter cryohalolentis K5]
gi|92394114|gb|ABE75389.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 232
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G G+ ++ KA + + K A +G+ A + G MY D A+ YR+A
Sbjct: 51 GVMYDEGSGIAQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQDSVKAVEWYRKA 110
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + ++A+ +A+ G AQ + +G GV
Sbjct: 111 ADQGYGDAQYNLGWMYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGDMYEKGAGVSK 170
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +AA+WYL+AA GY A + L Y G G+ +Q+R W +A D G
Sbjct: 171 DNVKAAKWYLKAANQGYALAQNSLGLMYFEGRGVLQDKKQSRDWYSKACDNG 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ L + G G+ + +A WY +AAE G A +N Y +G+
Sbjct: 42 GRASAQFNLGVMYDEGSGIAQDTAKAFEWYQKAAEQGNASAQFNIGWMYEHADGVSQDSV 101
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADHVKNV 304
+A +W ++AAD G+G AQ G ++ G +K A+ + A G+ A +
Sbjct: 102 KAVEWYRKAADQGYGDAQYNLGW-MYHNGRGIKKDYDQAMDWYLKAAYQGDAGAQNNIGD 160
Query: 305 ILQQLSATSRDR 316
+ ++ + S+D
Sbjct: 161 MYEKGAGVSKDN 172
>gi|422021694|ref|ZP_16368204.1| Sel1 domain-containing protein repeat-containing protein
[Providencia sneebia DSM 19967]
gi|414098291|gb|EKT59940.1| Sel1 domain-containing protein repeat-containing protein
[Providencia sneebia DSM 19967]
Length = 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE--AAISLYRQAAV 165
GK + G G++K+ + + K A +G A + G +Y +K+ + L+ Q A
Sbjct: 80 GKMYFDGNGMKKDYNLSFLWMTKAAEQGDVEAQSNLGFLYSTDGEKQDYEQVFLWTQKAA 139
Query: 166 LGDPAAQPAN--------------AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
L A N +A + +A+ G AQY L+L G GV +
Sbjct: 140 LQGFAIAQGNLGSLYRDGNGVKKDVHQAFLWIQKAANQGLASAQYDLSLLYSDGLGVKQD 199
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
++A RW +AA+ G+ A YN + Y G G+ ++QA W ++AA+ G KAQ G
Sbjct: 200 DEQAFRWTKKAADQGFTHAQYNLGVMYMDGIGVKQDYKQAFLWTQQAAEKGFAKAQYNLG 259
Query: 272 L 272
+
Sbjct: 260 I 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV+K++ +A K A +G A D L+Y
Sbjct: 151 GSLYRDGNGVKKDVHQAFLWIQKAANQGLASAQYDLSLLY-------------------S 191
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D + E+A + +A+ G AQY L + G GV + ++A W +AAE G+
Sbjct: 192 DGLGVKQDDEQAFRWTKKAADQGFTHAQYNLGVMYMDGIGVKQDYKQAFLWTQQAAEKGF 251
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+A YN + Y G G+ A+ W + A +
Sbjct: 252 AKAQYNLGILYYSGSGVTQDKSLAKSWFRNACN 284
>gi|437437682|ref|ZP_20756821.1| hypothetical protein SEEE4018_03243 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437601309|ref|ZP_20797553.1| hypothetical protein SEEE0268_04242 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435213295|gb|ELN96205.1| hypothetical protein SEEE4018_03243 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435261079|gb|ELO40240.1| hypothetical protein SEEE0268_04242 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVLGD 168
+G G +N AL+ + + AA+G A G+M+ + + + A++ YR+AA G
Sbjct: 2 YGDGFPQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGL 61
Query: 169 PAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
PAAQ + +A+ +A+ +AQYQL + GRGV N + A
Sbjct: 62 PAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNA 121
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKW 254
+WYL+AAE G+ A Y+ G +G+P ++QA W
Sbjct: 122 LKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIW 161
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N + A++ +A+ G AQ + + +G GV + Q+A WY +AA G A
Sbjct: 7 PQNTQLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQT 66
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
+ + +FG G+ S RQA W ++AA KAQ + G+ T
Sbjct: 67 HLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 110
>gi|117923520|ref|YP_864137.1| Sel1 domain-containing protein [Magnetococcus marinus MC-1]
gi|117607276|gb|ABK42731.1| Sel1 domain protein repeat-containing protein [Magnetococcus
marinus MC-1]
Length = 344
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
YR +L + P + A Y ++ AGH AQ+ LA G+G + + Q A W+
Sbjct: 52 YRWGLILAEGKGVPQDLNGAYSWFYTSATAGHAAAQFHLANMYLTGKGTEQDDQAAFDWF 111
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG- 278
++A G+ + YN L Y G KW RAA+ AQ G+ F +
Sbjct: 112 QKSARQGHPLSQYNLGLMYFKQRGPDQDKDAPLKWFTRAANQNFPLAQFNLGVMYFQQNR 171
Query: 279 ---EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+++ ++L+LA R G A+ ++ ++ ++LS +A + W
Sbjct: 172 APINYVESFMWLDLAARNGMDEAEKLRTILGRRLSDDELVQAEASIQRW 220
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 19/162 (11%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
RWG G+GV ++L+ A F A G A MY +
Sbjct: 53 RWGLILAEGKGVPQDLNGAYSWFYTSATAGHAAAQFHLANMY-----------------L 95
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
G Q A A +++ GH +QY L L + RG D + +W+ RAA
Sbjct: 96 TGKGTEQDDQA--AFDWFQKSARQGHPLSQYNLGLMYFKQRGPDQDKDAPLKWFTRAANQ 153
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ A +N + Y P+++ ++ W+ AA G +A+
Sbjct: 154 NFPLAQFNLGVMYFQQNRAPINYVESFMWLDLAARNGMDEAE 195
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQY+ L L G+GV +L A W+ +A G+ A ++ + Y G+G +
Sbjct: 46 GDHEAQYRWGLILAEGKGVPQDLNGAYSWFYTSATAGHAAAQFHLANMYLTGKGTEQDDQ 105
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTE 277
A W +++A GH +Q GL F +
Sbjct: 106 AAFDWFQKSARQGHPLSQYNLGLMYFKQ 133
>gi|167772195|ref|ZP_02444248.1| hypothetical protein ANACOL_03570 [Anaerotruncus colihominis DSM
17241]
gi|167665636|gb|EDS09766.1| Sel1 repeat protein [Anaerotruncus colihominis DSM 17241]
Length = 922
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK ++ G+G+ K++ KA++ F A +G++ A G +Y D
Sbjct: 709 GKIYRDGQGIEKDIQKAVNLFTLAAEQGNSFAAFTLGKLYLSGD---------------- 752
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
A P + A+K L ++ G+ AQY+L L +G V + + A RW AE G
Sbjct: 753 --AGLPIDPPFALKWLTFSAELGNQFAQYRLGKLLLQGEEVPKDTETAIRWLTAVAEQGN 810
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ--LEH 270
A Y Y G+ +P A KW + AAD G AQ LEH
Sbjct: 811 QYAQYALGKLYLLGKEVPKDKSNATKWFQLAADQGSEYAQYFLEH 855
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+L P++ P +A++ L +A+ G AQY L G+G++ ++Q+A + AAE
Sbjct: 675 ILDAPSSTPEQTAQALEWLTKAAETGQDCAQYALGKIYRDGQGIEKDIQKAVNLFTLAAE 734
Query: 225 GGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G A + Y G+ GLP+ A KW+ +A+ G+ AQ G L +GE
Sbjct: 735 QGNSFAAFTLGKLYLSGDAGLPIDPPFALKWLTFSAELGNQFAQYRLG-KLLLQGE 789
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 49/280 (17%)
Query: 23 TEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAASF----TL 78
T +D+ P L S +K KR ++K H P D + ++A+ +L
Sbjct: 341 TYRDDLPPRLPLSQQK-EFKRIKNIVIEEAVK-IGAHQQVFHPDDQQDGVSAATPGDPSL 398
Query: 79 PQLRAASLVCKSWNDALRPLREA--------MVLLRWGKRFKHGR-------GVRKNLDK 123
P+L C D + EA + W K ++ R ++ ++
Sbjct: 399 PELTQPDDDC---GDPVESPPEAPPEKSGSAKAHMEWSKEYRLARRCLFGDKNQPQDFEQ 455
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQPAN--A 176
A F +GA +G+ LAM D G M E+D + A + + A Q N A
Sbjct: 456 AFSLFQEGAQKGNALAMCDLGQMLADGLGQEIDIQAAHVWYRKALAAFHAVEEQKKNRYA 515
Query: 177 EEAVKLLYQASIA------------------GHVRAQYQLALCLHRGRGVDFNLQEAARW 218
E + LY A + + AQY LA R +GV+ + A
Sbjct: 516 EYRIGKLYAAGLGCEQDYGEAARWFQLSVDKEYKYAQYSLAGLFRRRQGVEQDDVRALEL 575
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
Y +A+ + A Y Y G G + +W ++A
Sbjct: 576 YTASAQQDFPYAAYELGKMYQDGIGCEKDTEVSEQWYQQA 615
>gi|332309262|ref|YP_004408594.1| Sel1 domain-containing protein, partial [Helicobacter felis ATCC
49179]
gi|326319860|emb|CCA30646.1| Sel1 domain protein repeat-containing protein, partial
[Helicobacter felis ATCC 49179]
Length = 642
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISL 159
+R G + +G+GV K+ KA D++ K A +GS A GLMY+E A+
Sbjct: 260 YIRLGDLYYNGQGVPKDYAKAFDNYQKAAEKGSAEAYNKLGLMYYEGKGVQQDYPQALEY 319
Query: 160 YRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
Y +A +G D P N ++A++ +A G + +L + G+
Sbjct: 320 YTKATKMGNANSYASLGTFYYDGQGAPRNYKKALEYYQKAGEMGSAKGYTRLGDLYYNGQ 379
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
GV N Q+A ++Y +A G A Y G+G+P + +A + K+AA+ G
Sbjct: 380 GVPQNYQQALKYYNKAGAMGDGVAYRTLGDMYYNGQGVPQDYAKAIDYYKKAAENG 435
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE 149
WN + A R G + +G+GVR++ +AL + K A G +A G MY+
Sbjct: 72 GWNGS------AQGYTRLGDMYYNGQGVRQDYQQALKYYNKAGAMGDGVAYRTLGDMYYN 125
Query: 150 ----MDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHV 192
+E A+S Y +AA GD A+ P + EA++ +AS G+
Sbjct: 126 GQGVSKDEEQAVSYYTKAAKEGDVASYYNLGHMYQKGQGVPKDYMEALRFYKKASEMGNS 185
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+ +L + G+GV + +A Y +AAE G A L Y G+G+P +++A
Sbjct: 186 KGYTRLGDLYYNGQGVPKDYAKAFDNYQKAAEKGSAEAYNKLGLMYYEGKGVPRDYKKAL 245
Query: 253 KWMKRAADCG 262
+ ++A + G
Sbjct: 246 GYYQKAGEMG 255
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A +G + +G+GV KN KA F GS G MY+ + A
Sbjct: 41 AQAYYNFGLLYYNGQGVYKNYAKAFQYFQAAGWNGSAQGYTRLGDMYYNGQGVRQDYQQA 100
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ Y +A +GD A + E+AV +A+ G V + Y L
Sbjct: 101 LKYYNKAGAMGDGVAYRTLGDMYYNGQGVSKDEEQAVSYYTKAAKEGDVASYYNLGHMYQ 160
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+G+GV + EA R+Y +A+E G + Y G+G+P + +A ++AA+ G
Sbjct: 161 KGQGVPKDYMEALRFYKKASEMGNSKGYTRLGDLYYNGQGVPKDYAKAFDNYQKAAEKGS 220
Query: 264 GKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGE 295
+A + GL ++ EG + KA+ Y + A G+
Sbjct: 221 AEAYNKLGL-MYYEGKGVPRDYKKALGYYQKAGEMGD 256
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 72 IAASFTLPQL-RAASLVCKSWNDALRPLREAMVL------LRWGKRFKHGRGVRKNLDKA 124
+A+ + L + + V K + +ALR ++A + R G + +G+GV K+ KA
Sbjct: 149 VASYYNLGHMYQKGQGVPKDYMEALRFYKKASEMGNSKGYTRLGDLYYNGQGVPKDYAKA 208
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAVLGDPAAQPANAEEA 179
D++ K A +GS A GLMY+E D K+A + Y++A +GD
Sbjct: 209 FDNYQKAAEKGSAEAYNKLGLMYYEGKGVPRDYKKA-LGYYQKAGEMGD----------- 256
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
G++R L + G+GV + +A Y +AAE G A L Y
Sbjct: 257 --------FRGYIR----LGDLYYNGQGVPKDYAKAFDNYQKAAEKGSAEAYNKLGLMYY 304
Query: 240 FGEGLPLSHRQARKWMKRAADCGH 263
G+G+ + QA ++ +A G+
Sbjct: 305 EGKGVQQDYPQALEYYTKATKMGN 328
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%)
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
+KE A Y + + P + ++A +A G RA + + G+GV +
Sbjct: 527 EKENAQQYYSLGVMYRNGQGVPRDYKKAFTYYQKAGEMGDARAYNNIGTMYYNGQGVPQD 586
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A +Y +AAE G + Y+ + Y G+G+P +++A + ++A + G +A
Sbjct: 587 YAKAIDYYKKAAEEGSAVSYYSLGVMYRNGQGVPRDYKKAFTYYQKAGEMGDARA 641
>gi|410088873|ref|ZP_11285537.1| hypothetical protein C790_3516 [Morganella morganii SC01]
gi|455739010|ref|YP_007505276.1| hypothetical protein MU9_1857 [Morganella morganii subsp. morganii
KT]
gi|409764619|gb|EKN48797.1| hypothetical protein C790_3516 [Morganella morganii SC01]
gi|455420573|gb|AGG30903.1| hypothetical protein MU9_1857 [Morganella morganii subsp. morganii
KT]
Length = 234
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G G + A D + K A +G+ A G MY++ E YRQA
Sbjct: 46 GSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQYSLGEMYFQ---GEGVQQDYRQA---- 98
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
++ +++ G+ AQ++L G GV+ + +AA WY +AAE G
Sbjct: 99 ------------IEWFHKSGEQGNAGAQFRLGAIYEDGDGVNPDFLKAAEWYKKAAEQGN 146
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ Y + Y +G+G+ ++R A +W K+AAD
Sbjct: 147 AFSQYQLAKMYYYGKGIEQNYRVAAEWYKKAAD 179
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
E+D +++A+ +AA GD AQ P + + A +A++ G+ AQ
Sbjct: 22 ELDTQDSALC---EAANGGDAGAQVTIGSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQ 78
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L +G GV + ++A W+ ++ E G A + Y G+G+ +A +W
Sbjct: 79 YSLGEMYFQGEGVQQDYRQAIEWFHKSGEQGNAGAQFRLGAIYEDGDGVNPDFLKAAEWY 138
Query: 256 KRAADCGHGKAQLE 269
K+AA+ G+ +Q +
Sbjct: 139 KKAAEQGNAFSQYQ 152
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ G AQ + + G G + + AA WY +AA G A Y+ Y GE
Sbjct: 30 LCEAANGGDAGAQVTIGSYYYYGNGAPIDYKTAADWYTKAAVQGNEYAQYSLGEMYFQGE 89
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G+ +RQA +W ++ + G+ AQ G ++ +G+
Sbjct: 90 GVQQDYRQAIEWFHKSGEQGNAGAQFRLG-AIYEDGD 125
>gi|322379183|ref|ZP_08053575.1| cysteine-rich protein H [Helicobacter suis HS1]
gi|322379989|ref|ZP_08054257.1| cysteine-rich protein H [Helicobacter suis HS5]
gi|321147578|gb|EFX42210.1| cysteine-rich protein H [Helicobacter suis HS5]
gi|321148385|gb|EFX42893.1| cysteine-rich protein H [Helicobacter suis HS1]
Length = 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+G+ KN KAL + K A GS LA + +MY + + + A+ Y++A
Sbjct: 11 GVMYHDGQGIGKNYQKALQYYQKAANMGSALAYNNLAIMYHDGQGVVKDYQKAMEYYKKA 70
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A +G +A + L L H G+ V + Q+A R+Y +AA
Sbjct: 71 ADMGLASAY-----------------------FNLGLMYHNGQSVGKDYQKALRYYRKAA 107
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
GG A +N ++ Y+ G+G+ ++A++++K+A G+
Sbjct: 108 NGGVATAYHNLAIMYAKGQGVQKDLQKAKEYVKKACKIGY 147
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G + L + H G+G+ N Q+A ++Y +AA G A N ++ Y G+G+ ++
Sbjct: 2 GSAEGYFSLGVMYHDGQGIGKNYQKALQYYQKAANMGSALAYNNLAIMYHDGQGVVKDYQ 61
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNV 304
+A ++ K+AAD G A GL ++ G+ + KA+ Y A G A H +
Sbjct: 62 KAMEYYKKAADMGLASAYFNLGL-MYHNGQSVGKDYQKALRYYRKAANGGVATAYHNLAI 120
Query: 305 ILQQLSATSRD 315
+ + +D
Sbjct: 121 MYAKGQGVQKD 131
>gi|222086264|ref|YP_002544796.1| hypothetical protein Arad_2748 [Agrobacterium radiobacter K84]
gi|221723712|gb|ACM26868.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 530
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G F +G GV ++ AL + K A +G A G +Y A+ YR+A
Sbjct: 271 GYSFANGLGVPRDYKLALQWYRKAADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKA 330
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD + A N +A++ +++ GH AQY L +G+G
Sbjct: 331 AAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAP 390
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA WY +AA+ G Y Y G G+P + QA + ++AA+ G+ +AQ +
Sbjct: 391 DKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQ--Y 448
Query: 271 GLG-LFTEGE 279
GLG ++ G+
Sbjct: 449 GLGSMYYSGD 458
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLY 160
G + HG GVR++ AL + K A +G A G MY DK + AI Y
Sbjct: 163 GYMYGHGLGVREDDAIALGWYRKAADQGRADAQYALGYMY---DKGLGTAADQSLAIDWY 219
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+++A GDP + +Y L GRGVD + +A WY
Sbjct: 220 QKSADQGDP-----------------------QGEYALGYAYTNGRGVDQDDGQAYSWYK 256
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++AE G A Y ++ G G+P ++ A +W ++AAD G AQ G L+ G+
Sbjct: 257 KSAEQGRADAQYGLGYSFANGLGVPRDYKLALQWYRKAADQGRADAQYAVGY-LYANGK 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G+GV N + A++ + K AA+G MY + + K + A+ YR++
Sbjct: 307 GYLYANGKGVPVNDNVAVEWYRKAAAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKS 366
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P AQ A + +A +A+ G QY L + G GV
Sbjct: 367 AEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPK 426
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA ++ +AAE G RA Y Y G+G+P QA KW ++AA G G + +H
Sbjct: 427 DYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDIGQATKWFRKAA--GQGLPEAQH 484
Query: 271 GL 272
L
Sbjct: 485 SL 486
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DPA P + ++K Q + G+ AQY L +G+GV+ + +A +WY +AA G
Sbjct: 24 DPAPAPGDTSISLKYWVQFAKDGNAAAQYGLGYRYAKGQGVEHDDAQAVQWYRKAAAQGN 83
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
V+A Y + YS G G+ +QA W ++AA+ G+ AQ G
Sbjct: 84 VQAEYALAYMYSNGLGVDKDLKQANAWYRKAAEQGYADAQYAIGY 128
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G + +GRGV ++ +A + K A +G A G + D K A+ YR+
Sbjct: 235 GYAYTNGRGVDQDDGQAYSWYKKSAEQGRADAQYGLGYSFANGLGVPRDYK-LALQWYRK 293
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ P N AV+ +A+ G +Y LA GRG+
Sbjct: 294 AADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKAAAQGDAEGEYALATMYTDGRGLS 353
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +A WY ++AE G+ A Y Y G+G QA W ++AAD G Q
Sbjct: 354 KNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYA 413
Query: 270 HGLGLFTEG 278
G L+ G
Sbjct: 414 LGY-LYYNG 421
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV+ +A+ G+V+A+Y LA G GVD +L++A WY +AAE GY A Y
Sbjct: 70 QAVQWYRKAAAQGNVQAEYALAYMYSNGLGVDKDLKQANAWYRKAAEQGYADAQYAIGYS 129
Query: 238 YSFGEGLPLSHRQARKWM 255
Y+ G G + + QA W
Sbjct: 130 YANGRGTDVDNEQAVGWY 147
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAV 165
+ GRG+ KN KAL+ + K A +G A G +Y + DK +AA + YR+AA
Sbjct: 346 YTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQAA-AWYRKAAD 404
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G Q P + +A +A+ G+ RAQY L + G GV ++
Sbjct: 405 QGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDI 464
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A +W+ +AA G A ++ S + GE
Sbjct: 465 GQATKWFRKAAGQGLPEAQHSLSYMAANGE 494
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKK-EAAISLYRQA 163
G R+ G+GV + +A+ + K AA+G+ A MY +DK + A + YR+A
Sbjct: 55 GYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYALAYMYSNGLGVDKDLKQANAWYRKA 114
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A G+ AQY + GRG D + ++A WY ++A
Sbjct: 115 AEQ-----------------------GYADAQYAIGYSYANGRGTDVDNEQAVGWYQKSA 151
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQ--ARKWMKRAADCGHGKAQLEHGL----GLFTE 277
+A +L Y +G GL + A W ++AAD G AQ G GL T
Sbjct: 152 AQ--GQAQAQYALGYMYGHGLGVREDDAIALGWYRKAADQGRADAQYALGYMYDKGLGTA 209
Query: 278 GEMMKAVVYLELATRAGETAADHV 301
+ A+ + + + G+ ++
Sbjct: 210 ADQSLAIDWYQKSADQGDPQGEYA 233
>gi|357383449|ref|YP_004898173.1| peptidoglycan binding domain-containing protein [Pelagibacterium
halotolerans B2]
gi|351592086|gb|AEQ50423.1| peptidoglycan binding domain-containing protein [Pelagibacterium
halotolerans B2]
Length = 452
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 184 YQASIA-GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
Y+ S A G AQY+L GRGVD +L A WY RAAE G +M+N + Y+ GE
Sbjct: 217 YERSAAQGFAPAQYRLGSLYEGGRGVDSDLDMARLWYQRAAEAGNRMSMHNLASLYAGGE 276
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
A W + AA G +Q G+ GL E + ++ ++ LA R+G+ A
Sbjct: 277 LEDQDFAAAAHWFEEAAGRGLTDSQFNLGMLYARGLGVEQDFEQSYIWFSLAARSGDKDA 336
Query: 299 DHVKNVILQQLSATSRDRAMLVVDSW 324
+ ++ + + L A + R + +W
Sbjct: 337 ANSRDDVARSLDADAIQRLDDTIAAW 362
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ+++ L G V+ + +AA WY R+A G+ A Y Y G G+ AR
Sbjct: 192 AQFEVGAILTEGTIVEQDFTQAAAWYERSAAQGFAPAQYRLGSLYEGGRGVDSDLDMARL 251
Query: 254 WMKRAADCGHGKAQLEHGLGLFTEGEM 280
W +RAA+ G+ + + + L+ GE+
Sbjct: 252 WYQRAAEAGN-RMSMHNLASLYAGGEL 277
>gi|404378836|ref|ZP_10983915.1| hypothetical protein HMPREF9021_01251 [Simonsiella muelleri ATCC
29453]
gi|294483337|gb|EFG31023.1| hypothetical protein HMPREF9021_01251 [Simonsiella muelleri ATCC
29453]
Length = 269
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV+++ D A + K A +G V Y + ++ + A Y AA G
Sbjct: 45 GFMYQTGAGVKQDNDLAAKWYTKAAEQGDVDCQVILAEWYDDNEQYDLAAKWYAVAAEQG 104
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
D AQ + ++A + A++ G A Y L + G D N ++
Sbjct: 105 DVDAQNNLARLYAEGLGFEQDYDKAEQYWQMAAVQGDDEALYNLGVIHDDALGRDPNYEK 164
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA +YL+AA G AM N + Y G G+P QA +W +AA+ G+ AQL G+
Sbjct: 165 AADFYLQAAHLGNADAMVNLGMLYQEGFGVPEDAAQANEWFLQAAELGNETAQLNLGIN- 223
Query: 275 FTEG 278
+ EG
Sbjct: 224 YAEG 227
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 142 DAGLMYWEMDKKEAAI-----SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQY 196
D YW+M AA+ +LY + D + N E+A QA+ G+ A
Sbjct: 127 DKAEQYWQM----AAVQGDDEALYNLGVIHDDALGRDPNYEKAADFYLQAAHLGNADAMV 182
Query: 197 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
L + G GV + +A W+L+AAE G A N + Y+ G G+ A KW
Sbjct: 183 NLGMLYQEGFGVPEDAAQANEWFLQAAELGNETAQLNLGINYAEGLGVMQDFDLAEKWWT 242
Query: 257 RAADCGHGKAQ 267
AA G+ A+
Sbjct: 243 IAAKQGNKDAE 253
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q N + A + Q + G QYQL G GV + AA+WY +AAE G V
Sbjct: 18 QKGNYQAAFPTIRQFAENGDADCQYQLGFMYQTGAGVKQDNDLAAKWYTKAAEQGDVDCQ 77
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYL 287
+ Y E L A KW AA+ G AQ + GL E + KA Y
Sbjct: 78 VILAEWYDDNEQYDL----AAKWYAVAAEQGDVDAQNNLARLYAEGLGFEQDYDKAEQYW 133
Query: 288 ELATRAGETAADHVKNVI 305
++A G+ A + VI
Sbjct: 134 QMAAVQGDDEALYNLGVI 151
>gi|323456171|gb|EGB12038.1| hypothetical protein AURANDRAFT_19925, partial [Aureococcus
anophagefferens]
Length = 268
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G G +KA + + G AM G MY E +DKK+A L+R
Sbjct: 90 GVCYRDGEGT----EKAAKIYRRAVELGVVHAMSLLGEMYNEGWGVKLDKKKA-TRLFRM 144
Query: 163 AAVLGDPAAQPANAE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AA GD AQ +AE EA + A+ G+ + L C G G + +
Sbjct: 145 AADRGDACAQVCSAEDFYSEKKFEEAFRYFALAANQGYTHGECHLGGCYLTGAGTEGKFE 204
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
EA R Y +A+ GY +N CY F +G L +AR W +RAA G KA
Sbjct: 205 EAFRCYALSADQGYTIGEHNLGCCYYFEKGTELDLGKARYWFERAAAKGDDKA 257
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%)
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
AA Y RA E G V AM N Y G G+ L ++A + + AAD GH +Q L
Sbjct: 2 AAEIYRRAVELGDVDAMNNLGDMYETGSGVKLDKKKAERLYRAAADRGHAVSQCNLANLL 61
Query: 275 FTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 314
+E + +AV YL L+ G TA++ V + T +
Sbjct: 62 HSEKKCEEAVRYLVLSADQGFTASEACLGVCYRDGEGTEK 101
>gi|315223817|ref|ZP_07865665.1| TPR repeat protein [Capnocytophaga ochracea F0287]
gi|314946147|gb|EFS98148.1| TPR repeat protein [Capnocytophaga ochracea F0287]
Length = 278
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLCYY-----------YRKGV 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 104 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAAD 155
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EM 280
+ A CY G G+ S A W ++AA+ G +AQ G F +G
Sbjct: 156 QDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSY 215
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 216 TKAIFWFEKAANQGDKEAQTI 236
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AA+ G V++ LC
Sbjct: 37 EDFKTLIEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLC 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV 131
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ + +GV ++ +KA F K A +G A G+ Y + E A+ +++AA
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQ 156
Query: 167 GDPAAQP------------ANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ A ++ L Y+ A+ G V AQ L +G+G+ +
Sbjct: 157 DFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYT 216
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+A W+ +AA G A CY G G+ S ++A W ++
Sbjct: 217 KAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAIYWFEKG 261
>gi|440226925|ref|YP_007334016.1| Sel1 domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038436|gb|AGB71470.1| Sel1 domain-containing protein [Rhizobium tropici CIAT 899]
Length = 526
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 16/126 (12%)
Query: 167 GDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+PAAQ AN + +AV +++ G+ +AQY LA GRGVD +L+
Sbjct: 46 GNPAAQYGLGYRYANGQGVEQDDAQAVDWYRKSAEQGNAQAQYALAYMYASGRGVDTDLK 105
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WYLRAA+ G A Y Y+ G G+ +S A W +++A G+AQ ++ LG
Sbjct: 106 QANDWYLRAAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSAS--QGQAQAQYALG 163
Query: 274 -LFTEG 278
++ G
Sbjct: 164 YMYANG 169
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 93 DALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE--- 149
D RP E + G + +G+G ++ ++A+ + K +G + G Y
Sbjct: 188 DQGRPDAEYAI----GYMYDNGQGAEEDQEQAVAWYKKAGNQGVAQGLYAVGYAYANGKG 243
Query: 150 MDKKEA-AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQ 195
+ + +A A S Y +AA+ G AQ A + +A++ +A+ G AQ
Sbjct: 244 VTRNDAEAYSWYMKAAIKGRADAQYAVGYSLANGIGVARDYRQALQWYRKAADQGRPDAQ 303
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L G+GV + A RWY +AAE G + Y + Y+ G G+ + +A W
Sbjct: 304 YALGYMYENGQGVKADDDSAVRWYRKAAEQGDAQGQYALAYMYAGGRGVGRDYGKAFDWY 363
Query: 256 KRAADCGHGKAQLEHGLGLFTEGEMMKA 283
++AA GH AQ G ++ G+ KA
Sbjct: 364 QKAASQGHADAQYALGY-MYENGQGTKA 390
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DPA PAN +K + + G+ AQY L G+GV+ + +A WY ++AE G
Sbjct: 24 DPAPGPANTTIDLKYWVEFAKQGNPAAQYGLGYRYANGQGVEQDDAQAVDWYRKSAEQGN 83
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----K 282
+A Y + Y+ G G+ +QA W RAA G+ AQ G + G M
Sbjct: 84 AQAQYALAYMYASGRGVDTDLKQANDWYLRAAQAGNADAQYAIGY-SYANGRGMAVSDED 142
Query: 283 AVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
AV + + + G+ A + + +D A+ +
Sbjct: 143 AVAWYQKSASQGQAQAQYALGYMYANGLGVHQDEAIAL 180
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G +G GV ++ +AL + K A +G A G MY ++A+ YR+A
Sbjct: 271 GYSLANGIGVARDYRQALQWYRKAADQGRPDAQYALGYMYENGQGVKADDDSAVRWYRKA 330
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD Q A + +A +A+ GH AQY L G+G
Sbjct: 331 AEQGDAQGQYALAYMYAGGRGVGRDYGKAFDWYQKAASQGHADAQYALGYMYENGQGTKA 390
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ AA WY +AA+ + Y + Y G G+P + Q ++AAD G A+ E+
Sbjct: 391 DKSTAASWYRKAADQNNPQGEYALAYLYYQGAGVPKDYGQTAALFRKAAD--QGDARAEY 448
Query: 271 GLG-LFTEG 278
GLG L+ G
Sbjct: 449 GLGYLYYNG 457
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAAISLYRQ 162
G + +G+GV +N +A ++K A +G A G + D ++A + YR+
Sbjct: 235 GYAYANGKGVTRNDAEAYSWYMKAAIKGRADAQYAVGYSLANGIGVARDYRQA-LQWYRK 293
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G P AQ A+ + AV+ +A+ G + QY LA GRGV
Sbjct: 294 AADQGRPDAQYALGYMYENGQGVKADDDSAVRWYRKAAEQGDAQGQYALAYMYAGGRGVG 353
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY +AA G+ A Y Y G+G A W ++AAD Q E
Sbjct: 354 RDYGKAFDWYQKAASQGHADAQYALGYMYENGQGTKADKSTAASWYRKAAD--QNNPQGE 411
Query: 270 HGLG-LFTEG 278
+ L L+ +G
Sbjct: 412 YALAYLYYQG 421
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ GRGV ++ KA D + K A++G A G MY + DK AA S YR+AA
Sbjct: 346 YAGGRGVGRDYGKAFDWYQKAASQGHADAQYALGYMYENGQGTKADKSTAA-SWYRKAAD 404
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+P + +Y LA ++G GV + + A + +AA+
Sbjct: 405 QNNP-----------------------QGEYALAYLYYQGAGVPKDYGQTAALFRKAADQ 441
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
G RA Y Y G G+P + A W +AA G +AQ HGL
Sbjct: 442 GDARAEYGLGYLYYNGYGVPKDSKTAADWFNKAAANGLPEAQ--HGL 486
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 17/181 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ GRGV +L +A D +L+ A G+ A G Y E A++ Y+++A
Sbjct: 94 YASGRGVDTDLKQANDWYLRAAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSASQ 153
Query: 167 GDPAAQPA-----------NAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ A + +EA+ L + +A+ G A+Y + G+G + + +
Sbjct: 154 GQAQAQYALGYMYANGLGVHQDEAIALGWYRKAADQGRPDAEYAIGYMYDNGQGAEEDQE 213
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +A G + +Y Y+ G+G+ + +A W +AA G AQ G
Sbjct: 214 QAVAWYKKAGNQGVAQGLYAVGYAYANGKGVTRNDAEAYSWYMKAAIKGRADAQYAVGYS 273
Query: 274 L 274
L
Sbjct: 274 L 274
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ +G+GV ++ +A+D + K A +G+ A MY + D K+ A Y +
Sbjct: 55 GYRYANGQGVEQDDAQAVDWYRKSAEQGNAQAQYALAYMYASGRGVDTDLKQ-ANDWYLR 113
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ A + E+AV +++ G +AQY L G GV
Sbjct: 114 AAQAGNADAQYAIGYSYANGRGMAVSDEDAVAWYQKSASQGQAQAQYALGYMYANGLGVH 173
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ A WY +AA+ G A Y Y G+G QA W K+A + G
Sbjct: 174 QDEAIALGWYRKAADQGRPDAEYAIGYMYDNGQGAEEDQEQAVAWYKKAGNQG 226
>gi|424741556|ref|ZP_18169901.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
gi|422944740|gb|EKU39723.1| Sel1 repeat protein [Acinetobacter baumannii WC-141]
Length = 266
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA+ L G+++ G+ V++N KAL+ F K + +G A D G MY+E +
Sbjct: 39 EALRLYEEGQKYFLGKDVKQNYQKALELFQKASDQGLAEAQNDLGGMYFEGLGTTQDYQK 98
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A + AA AAQ + ++A++L ++ G+ +AQY L
Sbjct: 99 AFKYFDSAANQKLAAAQYNLGLMYDKGLYIQKDRKKALELYELSTEQGYAKAQYNLGNAY 158
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV N ++A + +AAE +A YN Y+ GEG+ +++A ++ +AA G
Sbjct: 159 ANGDGVPQNNKKALELFSKAAEQNLPQASYNLGNMYADGEGVTQDNKKALEYFTKAAQQG 218
Query: 263 HGKAQ 267
+AQ
Sbjct: 219 FPQAQ 223
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Query: 151 DKKEAAISLYR--QAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+K A+ LY Q LG Q N ++A++L +AS G AQ L G G
Sbjct: 35 EKPSEALRLYEEGQKYFLGKDVKQ--NYQKALELFQKASDQGLAEAQNDLGGMYFEGLGT 92
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ Q+A +++ AA A YN L Y G + ++A + + + + G+ KAQ
Sbjct: 93 TQDYQKAFKYFDSAANQKLAAAQYNLGLMYDKGLYIQKDRKKALELYELSTEQGYAKAQY 152
Query: 269 EHG 271
G
Sbjct: 153 NLG 155
>gi|340373381|ref|XP_003385220.1| PREDICTED: uncharacterized protein ybeQ-like [Amphimedon
queenslandica]
Length = 323
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 102/246 (41%), Gaps = 42/246 (17%)
Query: 69 LNKIAASFTLPQLRAASLVC--------KSWND-ALRPLREAMVLLRWGKRFKHGRGVRK 119
L+ AS+T QL C K + D AL+ A L G + G G+ +
Sbjct: 84 LDNTDASYTYAQLLRIGQGCTADPVTAAKIFTDLALKAHPYAQFSL--GVMYYSGLGIEQ 141
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQPAN 175
+ KA + A G A G MY+ + KE A+ Y AA LGDPAA +
Sbjct: 142 SHSKAFTLYKVSAKNGIPQAYSALGDMYFNGQGIPEDKEEAVKCYENAAKLGDPAAHLS- 200
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
LA C ++G GV+ + Q++ Y AA+ V +YN +
Sbjct: 201 ----------------------LAQCYNKGSGVEVSFQKSFEHYKAAADAELVLGIYNVA 238
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELAT 291
+ Y G+G+ S +A ++ ++AAD G AQ+ G GL E + KA LA
Sbjct: 239 VHYFAGKGVEHSFEKAVEYFQKAADRGFTAAQVNLGNMYYQGLGVEKNVAKAKELYSLAA 298
Query: 292 RAGETA 297
+ A
Sbjct: 299 EDDKNA 304
>gi|89094623|ref|ZP_01167560.1| hypothetical protein MED92_00320 [Neptuniibacter caesariensis]
gi|89081093|gb|EAR60328.1| hypothetical protein MED92_00320 [Neptuniibacter caesariensis]
Length = 265
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 132 AARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDPAAQPANAEEAVK------ 181
A G+ A+ G MY W +DK EA A+ Y + A LG + N+ AVK
Sbjct: 48 AKEGNPDALNMVGQMYENGWGVDKDEAKAVRYYNRGASLGHLGS--VNSLRAVKDKEYKK 105
Query: 182 ---LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
+ A+ AG +AQ +L G G+ + A +WY ++AE GYV A +N Y
Sbjct: 106 ELLTVEPAAKAGDAKAQNRLGEMAEFGYGMKRDPNMAIQWYKQSAEQGYVPAQHNIGRAY 165
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQL--------EHGLGLFTEGEMMKAVVYLELA 290
+FG G+ + +A +W ++AA+ GH A EHG ++ A ++ A
Sbjct: 166 NFGTGVEQNFVEAERWYRQAAEQGHTDAMFFLGTLYSNEHGSQNDVNTNIL-AYAWMHNA 224
Query: 291 TRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
G A ++ ++ +L+++ A + + +R
Sbjct: 225 AELGNRTAVEIEKRLIMKLNSSELSEAKALAEEYR 259
>gi|333367586|ref|ZP_08459838.1| TPR repeat protein [Psychrobacter sp. 1501(2011)]
gi|332978563|gb|EGK15270.1| TPR repeat protein [Psychrobacter sp. 1501(2011)]
Length = 310
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV ++ +A+ A +GS A D G +Y E I +
Sbjct: 85 GDMYRTGDGVTQDYVQAVQWLSNAADQGSIEAQNDLGYLYME------GIGV-------- 130
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + +A +LL Q++ G+ AQ L +G GV N + A W++ A+E
Sbjct: 131 -----PQDYRKAFELLSQSANQGYAYAQNNLGTLYEKGLGVPQNYKMALAWFVMASEQQL 185
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKA 283
A N Y G G +++A KW ++AAD G+G A G+ GL+ E + KA
Sbjct: 186 DLAELNLGSLYFMGHGTKQDYQKAAKWYQKAADQGYGDALSNLGIMYQHGLYFEKDYAKA 245
Query: 284 VVYLELATRAGET 296
+ + A + G +
Sbjct: 246 LDMFQAAAQQGSS 258
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ++L + G + +L++AA WY ++A+ G+V A YN Y G+G+ +
Sbjct: 40 GDSEAQFELGVIYDNGDQLPQDLKKAAYWYTKSAQQGHVDAQYNIGDMYRTGDGVTQDYV 99
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG 278
QA +W+ AAD G +AQ + G L+ EG
Sbjct: 100 QAVQWLSNAADQGSIEAQNDLGY-LYMEG 127
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 164 AVLGDPAAQ-PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
V+ D Q P + ++A +++ GHV AQY + G GV + +A +W A
Sbjct: 49 GVIYDNGDQLPQDLKKAAYWYTKSAQQGHVDAQYNIGDMYRTGDGVTQDYVQAVQWLSNA 108
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A+ G + A + Y G G+P +R+A + + ++A+ G+ AQ E GLG+
Sbjct: 109 ADQGSIEAQNDLGYLYMEGIGVPQDYRKAFELLSQSANQGYAYAQNNLGTLYEKGLGV 166
>gi|113460299|ref|YP_718359.1| TPR repeat-containing protein [Haemophilus somnus 129PT]
gi|112822342|gb|ABI24431.1| conserved hypothetical protein, with TPR repeat (tetratrico peptide
repeat) [Haemophilus somnus 129PT]
Length = 181
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +A L Q + G AQ+ L L G G+ N Q+A WY +AAE GY A N
Sbjct: 40 NYSDAFPLFKQLAEQGDANAQHNLGLMYEYGDGITQNDQQAVYWYTKAAEQGYANAQNNL 99
Query: 235 SLCYS-FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLE 288
L Y+ G+G+ +++QA W +AA+ G+ AQ G+ ++ G+ + KA Y
Sbjct: 100 GLMYTDGGKGITQNYKQAVYWYTKAAEQGYANAQYNLGV-MYANGQGVQRNVSKAKQYYR 158
Query: 289 LATRAG 294
LA G
Sbjct: 159 LACDNG 164
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 136 STLAMVDA-----GLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAE 177
STLA D L + + A L++Q A GD AQ N +
Sbjct: 19 STLAETDTERFNRALQFIKQQNYSDAFPLFKQLAEQGDANAQHNLGLMYEYGDGITQNDQ 78
Query: 178 EAVKLLYQASIAGHVRAQYQLALCL-HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+AV +A+ G+ AQ L L G+G+ N ++A WY +AAE GY A YN +
Sbjct: 79 QAVYWYTKAAEQGYANAQNNLGLMYTDGGKGITQNYKQAVYWYTKAAEQGYANAQYNLGV 138
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCG 262
Y+ G+G+ + +A+++ + A D G
Sbjct: 139 MYANGQGVQRNVSKAKQYYRLACDNG 164
>gi|406880646|gb|EKD28944.1| hypothetical protein ACD_79C00146G0001, partial [uncultured
bacterium]
Length = 666
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQA 163
G + +G GV K+L +A+ F K +G++ + G +Y + + E A + Y +A
Sbjct: 395 GLMYYNGEGVEKDLKQAVYWFTKAGEQGNSDSQNKLGTIYGQGEGVEKDYKLAFNWYTKA 454
Query: 164 AV--------LG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
A LG + + ++AV +++ V AQY L+ + G GV+ +
Sbjct: 455 AEHNEKVQYNLGFLYLNGQGVEKDLKQAVYWFKKSADNLCVNAQYILSKMYYNGEGVEKD 514
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+EA +W +AAE G A YN Y GE + ++QA KW K+A+ G AQ G
Sbjct: 515 YKEAIKWITKAAEQGDGVAEYNLGWMYFNGECIEKDYKQAYKWFKQASKSGIADAQYNLG 574
Query: 272 LGLFT-EGEMMKAVVYLELATRAGETAADHVKNVI 305
L + EG + T+A E +N+I
Sbjct: 575 LMYYNGEGVTQDFKEAFKWFTKAAEQGDVDAQNMI 609
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
K + +G GV K+ +A+ K A +G +A + G MY+ E Y+QA
Sbjct: 503 KMYYNGEGVEKDYKEAIKWITKAAEQGDGVAEYNLGWMYF---NGECIEKDYKQA----- 554
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
K QAS +G AQY L L + G GV + +EA +W+ +AAE G V
Sbjct: 555 -----------YKWFKQASKSGIADAQYNLGLMYYNGEGVTQDFKEAFKWFTKAAEQGDV 603
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A Y+ EG+ + +A W A C +G Q
Sbjct: 604 DAQNMIGTMYALNEGVIQDYIKAHMWFNLA--CANGNNQ 640
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G AQ ++ L +G GV +L +A +WYL+AAE G + A N Y G G+
Sbjct: 128 KAAEKGDSEAQKKVGLMYLKGYGVSTDLTQAFQWYLKAAEQGNLEAQVNIGGAYRTGYGV 187
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAAD 299
+ +A +W +A + G+ AQ G ++ +GE + KA +L A G+ A
Sbjct: 188 NQDYNKALEWFTKATEQGNADAQRNLG-SMYYKGEGVKKDTKKAFEWLTKAVEQGDINAA 246
Query: 300 HVKNVILQQ 308
I Q+
Sbjct: 247 FDLGAIYQK 255
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A K L ++S G AQY L L + G GV+ +L++A W+ +A E G + Y
Sbjct: 375 AFKYLSKSSEQGWPFAQYYLGLMYYNGEGVEKDLKQAVYWFTKAGEQGNSDSQNKLGTIY 434
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
GEG+ ++ A W +AA+ ++++ LG
Sbjct: 435 GQGEGVEKDYKLAFNWYTKAAEHNE---KVQYNLGF 467
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEA-- 155
EA V + G ++ G GV ++ +KAL+ F K +G+ A + G MY++ + KK+
Sbjct: 172 EAQVNI--GGAYRTGYGVNQDYNKALEWFTKATEQGNADAQRNLGSMYYKGEGVKKDTKK 229
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ-- 213
A +A GD NA + +YQ G + + L + G D + Q
Sbjct: 230 AFEWLTKAVEQGD-----INAAFDLGAIYQKGCDGVSQDLEKCDFWLSKWAGSDLSCQYF 284
Query: 214 -----------------EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
AA WY +AAE G + + Y G+G+ ++Q+ W +
Sbjct: 285 IGGLYEDGTEDLTQDYKRAAYWYTKAAEKGDANSRFKLGDLYYEGKGVLQDYKQSEYWYE 344
Query: 257 RAADCG 262
+A + G
Sbjct: 345 KAVENG 350
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 24/246 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--------EMDK------K 153
G + G GV+K+ KA + K +G A D G +Y +++K K
Sbjct: 214 GSMYYKGEGVKKDTKKAFEWLTKAVEQGDINAAFDLGAIYQKGCDGVSQDLEKCDFWLSK 273
Query: 154 EAAISLYRQAAVLG---DPAAQ-PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A L Q + G D + + A +A+ G ++++L + G+GV
Sbjct: 274 WAGSDLSCQYFIGGLYEDGTEDLTQDYKRAAYWYTKAAEKGDANSRFKLGDLYYEGKGVL 333
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +++ WY +A E G Y Y G+ + + +A K++ ++++ G AQ
Sbjct: 334 QDYKQSEYWYEKAVENGIPGDNYYLGRKYYEGDKIVKDYSKAFKYLSKSSEQGWPFAQYY 393
Query: 270 HGLGLFT----EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
GL + E ++ +AV + A G + + + I Q +D + +W
Sbjct: 394 LGLMYYNGEGVEKDLKQAVYWFTKAGEQGNSDSQNKLGTIYGQGEGVEKDYKLAF--NWY 451
Query: 326 AMPSLH 331
+ H
Sbjct: 452 TKAAEH 457
>gi|398380209|ref|ZP_10538327.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397721525|gb|EJK82073.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 530
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G F +G GV ++ AL + K A +G A G +Y A+ YR+A
Sbjct: 271 GYSFANGLGVPRDYKLALQWYRKAADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKA 330
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A GD + A N +A++ +++ GH AQY L +G+G
Sbjct: 331 AAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAP 390
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA WY +AA+ G Y Y G G+P + QA + ++AA+ G+ +AQ +
Sbjct: 391 DKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQ--Y 448
Query: 271 GLG-LFTEGE 279
GLG ++ G+
Sbjct: 449 GLGSMYYSGD 458
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-------KEAAISLY 160
G + HG GVR++ AL + K A +G A G MY DK + AI Y
Sbjct: 163 GYMYGHGLGVREDDAIALGWYRKAADQGRADAQYALGYMY---DKGLGTAADQSLAIDWY 219
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
+++A GDP + +Y L GRGVD + +A WY
Sbjct: 220 QKSADQGDP-----------------------QGEYALGYAYTNGRGVDQDDGQAYSWYK 256
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++AE G A Y ++ G G+P ++ A +W ++AAD G AQ G L+ G+
Sbjct: 257 KSAEQGRADAQYGLGYSFANGLGVPRDYKLALQWYRKAADQGRADAQYAVGY-LYANGK 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G+GV N + A++ + K AA+G MY + + K + A+ YR++
Sbjct: 307 GYLYANGKGVPVNDNVAVEWYRKAAAQGDAEGEYALATMYTDGRGLSKNDGKALEWYRKS 366
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G P AQ A + +A +A+ G QY L + G GV
Sbjct: 367 AEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYALGYLYYNGSGVPK 426
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ +AA ++ +AAE G RA Y Y G+G+P QA KW ++AA G G + +H
Sbjct: 427 DYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDIGQATKWFRKAA--GQGLPEAQH 484
Query: 271 GL 272
L
Sbjct: 485 SL 486
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DPA P + ++K Q + G+ AQY L +G+GV+ + +A +WY +AA G
Sbjct: 24 DPAPTPGDTSISLKYWVQFAKDGNAAAQYGLGYRYAKGQGVEHDDAQAVQWYRKAAAQGN 83
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
V+A Y + YS G G+ ++A W ++AA+ G+ AQ G
Sbjct: 84 VQAEYALAYMYSNGLGVDKDLKEANTWYRKAAEHGYADAQYAIGY 128
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 20/189 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQ 162
G + +GRGV ++ +A + K A +G A G + D K A+ YR+
Sbjct: 235 GYAYTNGRGVDQDDGQAYSWYKKSAEQGRADAQYGLGYSFANGLGVPRDYK-LALQWYRK 293
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ P N AV+ +A+ G +Y LA GRG+
Sbjct: 294 AADQGRADAQYAVGYLYANGKGVPVNDNVAVEWYRKAAAQGDAEGEYALATMYTDGRGLS 353
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +A WY ++AE G+ A Y Y G+G QA W ++AAD G Q
Sbjct: 354 KNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQAAAWYRKAADQGSAGGQYA 413
Query: 270 HGLGLFTEG 278
G L+ G
Sbjct: 414 LGY-LYYNG 421
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV+ +A+ G+V+A+Y LA G GVD +L+EA WY +AAE GY A Y
Sbjct: 70 QAVQWYRKAAAQGNVQAEYALAYMYSNGLGVDKDLKEANTWYRKAAEHGYADAQYAIGYS 129
Query: 238 YSFGEGLPLSHRQARKWM 255
Y+ G G + + QA W
Sbjct: 130 YANGRGKDVDNEQAVGWY 147
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM-----DKKEAAISLYRQAAV 165
+ GRG+ KN KAL+ + K A +G A G +Y + DK +AA + YR+AA
Sbjct: 346 YTDGRGLSKNDGKALEWYRKSAEQGHPDAQYALGYIYDKGQGTAPDKGQAA-AWYRKAAD 404
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G Q P + +A +A+ G+ RAQY L + G GV ++
Sbjct: 405 QGSAGGQYALGYLYYNGSGVPKDYGQAADFFRKAAEQGNARAQYGLGSMYYSGDGVPKDI 464
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A +W+ +AA G A ++ S + GE
Sbjct: 465 GQATKWFRKAAGQGLPEAQHSLSYMAANGE 494
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ G+GV + +A+ + K AA+G+ A MY + D KE A + YR+
Sbjct: 55 GYRYAKGQGVEHDDAQAVQWYRKAAAQGNVQAEYALAYMYSNGLGVDKDLKE-ANTWYRK 113
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA G+ AQY + GRG D + ++A WY ++
Sbjct: 114 AAEH-----------------------GYADAQYAIGYSYANGRGKDVDNEQAVGWYQKS 150
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQ--ARKWMKRAADCGHGKAQLEHGL----GLFT 276
A +A +L Y +G GL + A W ++AAD G AQ G GL T
Sbjct: 151 AAQ--DQAQAQYALGYMYGHGLGVREDDAIALGWYRKAADQGRADAQYALGYMYDKGLGT 208
Query: 277 EGEMMKAVVYLELATRAGETAADHV 301
+ A+ + + + G+ ++
Sbjct: 209 AADQSLAIDWYQKSADQGDPQGEYA 233
>gi|367477007|ref|ZP_09476370.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365270674|emb|CCD88838.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 438
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 163 AAVLGDPAAQPANAEEAVKL--LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
AA L D +N + AV L L + G RAQ+ L G GV N EA WY
Sbjct: 21 AAELEDAVTAASNGQAAVALRRLQPLAAKGDARAQFDLGFMQAFGVGVARNQAEALVWYR 80
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
+AA+ G A + + Y GEG H +A +W RAA G ++Q GL + +G++
Sbjct: 81 KAADQGLAIAQHYLGIAYFNGEGAGRDHGEAARWFNRAAAQGFAQSQYMLGL-MMLDGQV 139
Query: 281 M-----KAVVYLELATRAG-ETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
M + +L +A R G +A ++ V +LS R +A + +WRA P
Sbjct: 140 MTRDVIQGYAWLVMAGRNGVRSAGREIQRV---KLSEAQRRQAEETIVAWRAKP 190
>gi|420160287|ref|ZP_14667071.1| Sel1 repeat protein, partial [Capnocytophaga ochracea str. Holt 25]
gi|394760742|gb|EJF43245.1| Sel1 repeat protein, partial [Capnocytophaga ochracea str. Holt 25]
Length = 251
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q AN ++ +KL + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 19 QDANVKKLIKL----AEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV L + + G + AQYQLA C G+GV + Q+ W + A+ G A +L
Sbjct: 56 QEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G+G+ S + +++ A+ + + QL+ + G ++ KA + E A++
Sbjct: 116 CYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASK 175
Query: 293 AGETAAD 299
G + A+
Sbjct: 176 NGNSEAE 182
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL---RAAEGGYVR 229
P + ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y + AE
Sbjct: 88 PKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIEKHAEKENPE 144
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
>gi|329848817|ref|ZP_08263845.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328843880|gb|EGF93449.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 245
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +HG GV+K++ A+ LK A +G A D +Y Y + +
Sbjct: 32 GSDLRHGYGVKKDISLAMPWLLKAAEQGLADAQNDYAKVY-----------FYGEDGIEA 80
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP E+A+ L +A+ G++ +Q LA + GVD + + Y +AAEGG+
Sbjct: 81 DP-------EKAIPWLRRAADQGYLHSQTLLAEAYYNATGVDQDTDKGLVLYTKAAEGGH 133
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
A YN YS G +P +A+ W++ AA +AQL+
Sbjct: 134 GFAQYNLGTIYSNGINVPRDDTKAKLWLETAARRNVVEAQLK 175
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-G 243
QA+ G+ AQY L G GV ++ A W L+AAE G A + + Y +GE G
Sbjct: 18 QAAQKGYAPAQYMAGSDLRHGYGVKKDISLAMPWLLKAAEQGLADAQNDYAKVYFYGEDG 77
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+ +A W++RAAD G+ +Q
Sbjct: 78 IEADPEKAIPWLRRAADQGYLHSQ 101
>gi|429755968|ref|ZP_19288584.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429172225|gb|EKY13799.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 278
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYY-----------YRKGV 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 104 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAAD 155
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EM 280
+ A CY G G+ S A W ++AA+ G +AQ G F +G
Sbjct: 156 QDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSY 215
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 216 TKAIFWFEKAANQGDKEAQTI 236
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AAE G V++ LC
Sbjct: 37 EDFKTLIEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLC 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV 131
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ + +GV ++ +KA F K A +G A G+ Y + E A+ +++AA
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQ 156
Query: 167 GDPAAQP------------ANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ A ++ L Y+ A+ G V AQ L +G+G+ +
Sbjct: 157 DFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYT 216
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+A W+ +AA G A CY G G+ S ++A W ++
Sbjct: 217 KAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAIYWFEKG 261
>gi|301101950|ref|XP_002900063.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102638|gb|EEY60690.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 319
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 108 GKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQ 162
GK F G V ++L++AL + + A G A D G MY + + A+ LYRQ
Sbjct: 128 GKLFFQGNDEVPRDLERALHYWTQAAKSGHMAANYDLGYMYAQGLHVTQDDDKAVQLYRQ 187
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA P A A +AE+AV A+ AG+ AQ+ L C GRG++
Sbjct: 188 AAKQNMPEAHRALGNACLHGRGVVKSAEQAVTHFRHAAEAGNALAQFDLGACYMLGRGIE 247
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +AA+ + AAEGG +A + + G +P + +A ++ + AA G
Sbjct: 248 QDHSKAAQLFFLAAEGGVPQAQLCLAQLFETGHEIPADYDKAVQYYQLAAKGG 300
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD-----PA 170
GV+ L K+ D+ GST +++ A +++W A + R LG A
Sbjct: 48 GVKYLLGKSEDA----GEVGSTTSVLGA-VLHW---TNAAGMGHVRAQGALGSLYLKGHA 99
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG-VDFNLQEAARWYLRAAEGGYVR 229
P N A + L QA+ AGH + +++ +G V +L+ A ++ +AA+ G++
Sbjct: 100 GIPRNVALATQFLQQAADAGHDGSCHEIGKLFFQGNDEVPRDLERALHYWTQAAKSGHMA 159
Query: 230 AMYNTSLCYSFGEGLPLS---------HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM 280
A Y+ L Y + +GL ++ +RQA K A G A L HG G+ E
Sbjct: 160 ANYD--LGYMYAQGLHVTQDDDKAVQLYRQAAKQNMPEAHRALGNACL-HGRGVVKSAE- 215
Query: 281 MKAVVYLELATRAGETAA 298
+AV + A AG A
Sbjct: 216 -QAVTHFRHAAEAGNALA 232
>gi|288573899|ref|ZP_06392256.1| Sel1 domain protein repeat-containing protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569640|gb|EFC91197.1| Sel1 domain protein repeat-containing protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 854
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 46/219 (21%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---------------- 151
G+ GRG+ K+ KA++ K A G A D G++ + D
Sbjct: 174 GRLLSLGRGIEKDEGKAVELLRKAAEGGHIYAQHDLGILLGKSDDPKLVEEADKWLEKAA 233
Query: 152 -------------------KKEAAISLYRQAAVLGDPAAQ----------PANAEEAVKL 182
++E A + A+ G+P AQ + +EA
Sbjct: 234 KEGYDDSQLSYGAFLLRNGREEEAKDWLKMASDRGNPEAQYLLGQLCRQQGGSFKEAANW 293
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
A+ GH AQY LA RG GV+ + +A WY RAAE G A YN S+ Y G
Sbjct: 294 FGLAARQGHGPAQYALATLYERGIGVEKDPTLSALWYRRAAEQGIPEAQYNLSVIYRKGS 353
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 281
LP ++ W+K+AA+ G +AQ G L+ EG+ +
Sbjct: 354 SLPKDLGKSLLWLKKAAELGLPEAQYSLGT-LYREGDEI 391
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G + K+L K+L K A G A G +Y E D+
Sbjct: 349 YRKGSSLPKDLGKSLLWLKKAAELGLPEAQYSLGTLYREGDEI----------------- 391
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + +A +L +AS G+ +Q L L RG GV + +EA + + E GY A
Sbjct: 392 --PRDLSKAAELFRKASNRGNAESQCALGLMYLRGAGVPRDEKEAMEHLIASGEAGYPSA 449
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
YN L YS GE +P +A +W ++AA GH AQ G+
Sbjct: 450 QYNLGLLYSRGEAVPRDTAEAARWFRKAALQGHPGAQCNLGV 491
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
+LR G + G+ V + +A+ K A +GS A G MY
Sbjct: 593 AMLRLGLAYDEGKLVAPDKMEAVKWIRKAAEQGSDKAQFTLGAMY--------------- 637
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA-RWYLR 221
+ GD + NA A+ +++ G+++AQY L LCL + D L+ +A W R
Sbjct: 638 --LKGDGLVKSHNA--AMSWFCESAKQGNLQAQYNLGLCLWNSK--DEELRSSAIMWMER 691
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-----GLFT 276
AA+GGY A + Y GEGLP S A +W +A+ G+ AQ + G +
Sbjct: 692 AAQGGYAPAQCELGIRYITGEGLPQSDPAALRWFSLSAEQGYVPAQYNLAVLYLYGGPYL 751
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ A + A + G A + ++ +A SRD
Sbjct: 752 SPDESSAFHWFSRAAKEGYRDAQFYLGCLYERGNAVSRD 790
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N ++A++ K GS A G ++ A G P
Sbjct: 529 YQKGKGVERNRERAVELLEKAIEAGSWDAPYSLGCLF---------------AGDYGGPV 573
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ + A+ LYQA+ G RA +L L G+ V + EA +W +AAE G +A
Sbjct: 574 REIS----ALYRLYQAASIGDRRAMLRLGLAYDEGKLVAPDKMEAVKWIRKAAEQGSDKA 629
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF-TEGEMMK--AVVYL 287
+ Y G+GL SH A W +A G+ +AQ GL L+ ++ E ++ A++++
Sbjct: 630 QFTLGAMYLKGDGLVKSHNAAMSWFCESAKQGNLQAQYNLGLCLWNSKDEELRSSAIMWM 689
Query: 288 ELATRAGETAA 298
E A + G A
Sbjct: 690 ERAAQGGYAPA 700
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ L +G GV + +A +WY AA+GG YN L + GEG P
Sbjct: 57 GDPLAQCTLGYLYDQGNGVSQDKGKAMKWYKEAAKGGSADGQYNLGLMFRDGEGTPKDSY 116
Query: 250 QARKWMKRAADCGHGKAQLEHGL 272
+A W+++AA GH AQ+ G+
Sbjct: 117 KATYWLEKAASQGHQTAQIALGM 139
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 21/168 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV ++ KA+ + + A GS + GLM+
Sbjct: 66 GYLYDQGNGVSQDKGKAMKWYKEAAKGGSADGQYNLGLMFR------------------- 106
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D P ++ +A L +A+ GH AQ L + + ++ A+W+ AAE G
Sbjct: 107 DGEGTPKDSYKATYWLEKAASQGHQTAQIALGMMAMNPDEGEPRYEDGAKWFAMAAEQGN 166
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ YN S G G+ +A + +++AA+ GH AQ H LG+
Sbjct: 167 ISGCYNLGRLLSLGRGIEKDEGKAVELLRKAAEGGHIYAQ--HDLGIL 212
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G ++ G + ++L KA + F K + RG+ + GLMY D+KEA L
Sbjct: 382 GTLYREGDEIPRDLSKAAELFRKASNRGNAESQCALGLMYLRGAGVPRDEKEAMEHLIAS 441
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
G P+AQ P + EA + +A++ GH AQ L + RG GV
Sbjct: 442 GEA-GYPSAQYNLGLLYSRGEAVPRDTAEAARWFRKAALQGHPGAQCNLGVQYERGDGVA 500
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
AA W +AA+ G A+YN +L Y G+G+ + +A + +++A + G
Sbjct: 501 LVPSAAAAWLGKAAKQGEPYALYNLALLYQKGKGVERNRERAVELLEKAIEAG 553
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE---AAISLYRQAA 164
G + G G+ K+ + A+ F + A +G+ A + GL W +E +AI +AA
Sbjct: 634 GAMYLKGDGLVKSHNAAMSWFCESAKQGNLQAQYNLGLCLWNSKDEELRSSAIMWMERAA 693
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLA-LCLHRGRGVDF 210
G AQ P + A++ ++ G+V AQY LA L L+ G +
Sbjct: 694 QGGYAPAQCELGIRYITGEGLPQSDPAALRWFSLSAEQGYVPAQYNLAVLYLYGGPYLSP 753
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ A W+ RAA+ GY A + Y G + + A+ W+ A + G +A
Sbjct: 754 DESSAFHWFSRAAKEGYRDAQFYLGCLYERGNAVSRDVKAAKTWLTMAMEGGSAEA 809
>gi|420160045|ref|ZP_14666835.1| Sel1 repeat protein [Capnocytophaga ochracea str. Holt 25]
gi|394761185|gb|EJF43611.1| Sel1 repeat protein [Capnocytophaga ochracea str. Holt 25]
Length = 256
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 33 VRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLCYY-----------YRKGV 81
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 82 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAAD 133
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EM 280
+ A CY G G+ S A W ++AA+ G +AQ G F +G
Sbjct: 134 QDFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSY 193
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 194 TKAIFWFEKAANQGDKEAQTI 214
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AA+ G V++ LC
Sbjct: 15 EDFKTLIEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAKQGDVKSQTKLGLC 74
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 75 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 118
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ + +GV ++ +KA F K A +G A G+ Y + E A+ +++AA
Sbjct: 75 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQ 134
Query: 167 GDPAAQP------------ANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ A ++ L Y+ A+ G V AQ L +G+G+ +
Sbjct: 135 DFAEAQSFLGYCYYKGLGVAQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYT 194
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+A W+ +AA G A CY G G+ S ++A W ++
Sbjct: 195 KAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAIYWFEKG 239
>gi|237748042|ref|ZP_04578522.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379404|gb|EEO29495.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 291
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEE 178
K ++A+ F+K A+ S M G MY +A + R N
Sbjct: 35 KQYEEAMSFFMKLDAQKSPEIMNRIGFMY------DAGRGVER-------------NGNI 75
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A + +A+ G +AQY L LC G GV ++ EA +WYL+AAE GY A
Sbjct: 76 AFQWYRKAAETGLAKAQYNLGLCFQNGIGVKKDINEAIKWYLKAAEQGYPDAESKMGYLT 135
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG 294
G+G+ +QA +W +RA + G+ A E G+ GL + + AV Y + G
Sbjct: 136 VTGKGVKQDFKQAMQWYRRAVEHGNIHAIPELGIMYEEGLGVKKDKTHAVQYYIMGAEKG 195
Query: 295 ETAA 298
A
Sbjct: 196 NVRA 199
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAI 157
++ R G + GRGV +N + A + K A G A + GL + + D EA I
Sbjct: 55 IMNRIGFMYDAGRGVERNGNIAFQWYRKAAETGLAKAQYNLGLCFQNGIGVKKDINEA-I 113
Query: 158 SLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
Y +AA G P A+ + ++A++ +A G++ A +L +
Sbjct: 114 KWYLKAAEQGYPDAESKMGYLTVTGKGVKQDFKQAMQWYRRAVEHGNIHAIPELGIMYEE 173
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G GV + A ++Y+ AE G VRA + + Y +G G+ ++ W K+AA+ G
Sbjct: 174 GLGVKKDKTHAVQYYIMGAEKGNVRAQFLLAEAYRYGRGIKNDDERSLYWYKKAAENGSA 233
Query: 265 KA 266
A
Sbjct: 234 DA 235
>gi|374365090|ref|ZP_09623185.1| hypothetical protein OR16_03232 [Cupriavidus basilensis OR16]
gi|373103362|gb|EHP44388.1| hypothetical protein OR16_03232 [Cupriavidus basilensis OR16]
Length = 253
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A +L RQA D A + A++ +A+ G+ AQY A+ L RG G EA
Sbjct: 53 AQALTRQAVTAYDAGA----FDSALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQDEA 108
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
W RAAE +A + Y GE +P S A +W +RAA+ GH +AQ+E F
Sbjct: 109 LVWLHRAAENDMTQAQFTFGEMYEHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYF 168
Query: 276 T----EGEMMKAVVYLELATRAGETAADHV 301
T E + KA + A AG+ A ++
Sbjct: 169 TGRGLERDYGKAFAWYTRAATAGDGGAQYI 198
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAA--------VLG 167
D AL F K A +G+ LA + +M + + EA + L+R A G
Sbjct: 69 FDSALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQDEALVWLHRAAENDMTQAQFTFG 128
Query: 168 DPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+ P + E A + +A+ GHV+AQ +LA GRG++ + +A WY RAA
Sbjct: 129 EMYEHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLERDYGKAFAWYTRAA 188
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSH--RQARKWMKRAADCG 262
G A Y + Y GE + QA+ W RAA G
Sbjct: 189 TAGDGGAQYIVASYYERGEPGVVEKDIEQAKLWYARAAAHG 229
>gi|303289997|ref|XP_003064286.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454602|gb|EEH51908.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 151
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EAVKL QA G+V AQY L + G GV+ N+ EA +WY +AAE Y A N
Sbjct: 27 NHVEAVKLYRQAVEHGYVGAQYDLGVSYEHGEGVEKNMAEAVKWYHQAAEQSYAYAQNNL 86
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y GEG + +A KW +AA+ + AQ
Sbjct: 87 GVSYEHGEGEEKNMAEAVKWYHQAAEQSYAYAQ 119
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ GH AQ +L C + GRGV+ N EA + Y +A E GYV A Y+ + Y GEG+
Sbjct: 1 QAAEKGHAGAQNRLGRCYYHGRGVEKNHVEAVKLYRQAVEHGYVGAQYDLGVSYEHGEGV 60
Query: 245 PLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATR 292
+ +A KW +AA+ + AQ EHG G E M +AV + A
Sbjct: 61 EKNMAEAVKWYHQAAEQSYAYAQNNLGVSYEHGEG--EEKNMAEAVKWYHQAAE 112
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 20/158 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G+ + HGRGV KN +A+ + + G A D G+ Y + E
Sbjct: 13 RLGRCYYHGRGVEKNHVEAVKLYRQAVEHGYVGAQYDLGVSYEHGEGVEK---------- 62
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
N EAVK +QA+ + AQ L + G G + N+ EA +WY +AAE
Sbjct: 63 ---------NMAEAVKWYHQAAEQSYAYAQNNLGVSYEHGEGEEKNMAEAVKWYHQAAEQ 113
Query: 226 GYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCG 262
Y A N CY F G +A W+ +A + G
Sbjct: 114 SYAYAQNNLGRCYYFSYGHCERDLGKAEHWLAKAVENG 151
>gi|354594574|ref|ZP_09012613.1| hypothetical protein CIN_13090 [Commensalibacter intestini A911]
gi|353672250|gb|EHD13950.1| hypothetical protein CIN_13090 [Commensalibacter intestini A911]
Length = 199
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +AQY L + +G GV ++ A +WY ++A+ GY A N YS G+G+PL +
Sbjct: 39 GDAKAQYNLGIMYSQGDGVGKDIFTAVKWYKKSADQGYADAQSNLGFLYSHGDGVPLDYH 98
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNV 304
QA ++ +AAD G+ AQ + ++ +G KA+ L A++ G+ A + +
Sbjct: 99 QAIEYYTKAADQGNATAQ-SNLAAMYYDGRGTLKSFPKAIELLTKASKQGDGEAYYNIGI 157
Query: 305 ILQQLSATSRD 315
+ + +D
Sbjct: 158 MYRNGEGVPKD 168
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A G + G GV K++ A+ + K A +G A + G +Y D
Sbjct: 40 DAKAQYNLGIMYSQGDGVGKDIFTAVKWYKKSADQGYADAQSNLGFLYSHGD-------- 91
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
P + +A++ +A+ G+ AQ LA + GRG + +A
Sbjct: 92 -----------GVPLDYHQAIEYYTKAADQGNATAQSNLAAMYYDGRGTLKSFPKAIELL 140
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+A++ G A YN + Y GEG+P ++ ++MK+ C H
Sbjct: 141 TKASKQGDGEAYYNIGIMYRNGEGVPKDWKKVAEYMKQG--CLH 182
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AVK +++ G+ AQ L G GV + +A +Y +AA+ G A N + Y
Sbjct: 64 AVKWYKKSADQGYADAQSNLGFLYSHGDGVPLDYHQAIEYYTKAADQGNATAQSNLAAMY 123
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G G S +A + + +A+ G G+A G+ ++ GE
Sbjct: 124 YDGRGTLKSFPKAIELLTKASKQGDGEAYYNIGI-MYRNGE 163
>gi|340055094|emb|CCC49405.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 309
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ + A+ LL +AS AGHV A + LCL G GV +L A W RAA+ GY AM+
Sbjct: 158 DVQYALSLLDEASAAGHVGAMLLVGLCLRDGVGVPADLIAALTWVERAADAGYAPAMFEL 217
Query: 235 SLCYSFG-----EGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ + G LP A++W +RAA+ GH AQL G
Sbjct: 218 GVMFEDGVVCGDSQLPSDWGDAQQWYRRAAEHGHTMAQLNLG 259
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
++Q A A+ G+V AM LC G G+P A W++RAAD G+ A E
Sbjct: 158 DVQYALSLLDEASAAGHVGAMLLVGLCLRDGVGVPADLIAALTWVERAADAGYAPAMFEL 217
Query: 271 GLGLFTEG 278
G+ +F +G
Sbjct: 218 GV-MFEDG 224
>gi|344925530|ref|ZP_08778991.1| hypothetical protein COdytL_12859 [Candidatus Odyssella
thessalonicensis L13]
Length = 647
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ AG AQY L + +G+G+D + +A +W RAAE G+ A L Y G+G+P
Sbjct: 448 AAKAGITIAQYNLGVNYSKGQGIDISYPKAIKWLTRAAEAGHGPAQLRLGLYYEKGKGVP 507
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
QAR W+K+AA A+ G T GE KAV + A G+T A
Sbjct: 508 QDKDQARWWLKQAAKQKEEDAECCLGEFYETVGEQYKAVKWYTRAAAHGDTTA 560
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + G+G+ + KA+ + A G A + GL Y + DK +A L +Q
Sbjct: 461 GVNYSKGQGIDISYPKAIKWLTRAAEAGHGPAQLRLGLYYEKGKGVPQDKDQARWWL-KQ 519
Query: 163 AA---------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AA LG+ +AVK +A+ G A+ L + +G GV+ N
Sbjct: 520 AAKQKEEDAECCLGEFYETVGEQYKAVKWYTRAAAHGDTTAKLYLGMRYIQGNGVEKNPS 579
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ AA+ + A YN +CY GE +P ++ +A KW + AA+ GH ++Q
Sbjct: 580 QGMALLREAADHDDMDAQYNLGVCYISGEFIPHNYSEAIKWFRLAANKGHYESQ 633
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
LR G ++ G+GV ++ D+A + A + A G Y + ++ A+ Y +AA
Sbjct: 494 LRLGLYYEKGKGVPQDKDQARWWLKQAAKQKEEDAECCLGEFYETVGEQYKAVKWYTRAA 553
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
GD A+ N + + LL +A+ + AQY L +C G + N
Sbjct: 554 AHGDTTAKLYLGMRYIQGNGVEKNPSQGMALLREAADHDDMDAQYNLGVCYISGEFIPHN 613
Query: 212 LQEAARWYLRAAEGGYVRAMYN 233
EA +W+ AA G+ + YN
Sbjct: 614 YSEAIKWFRLAANKGHYESQYN 635
>gi|83943557|ref|ZP_00956016.1| hypothetical protein EE36_01610 [Sulfitobacter sp. EE-36]
gi|83845789|gb|EAP83667.1| hypothetical protein EE36_01610 [Sulfitobacter sp. EE-36]
Length = 422
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G ++ G+GV + A D F + AA+G A G M+ E+ + A A + YR+
Sbjct: 100 GVSYRFGQGVDPDAKTAFDYFTRAAAQGFDKAQFSLGNMH-ELGEGTAQSDAEARAWYRK 158
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ Q A EEA +LL ++ G AQY L + G GV
Sbjct: 159 AAEQGNAMGQYRLGILLLEGRGGEAAPEEAQQLLRASAEQGLADAQYSLGWMANHGVGVT 218
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY AAE GY A N Y+ G G +A W AA G AQ+
Sbjct: 219 QDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGTSQDDEKAVGWYYEAARNGVPAAQVN 278
Query: 270 HG----LGLFTEGEMMKAVVYLELATRAGETAA 298
G LG + + +A+V+ + A GE A
Sbjct: 279 MGKHYALGRGVQQDFDEAMVWYQQAAEYGEPVA 311
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 106/247 (42%), Gaps = 43/247 (17%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A L W HG GV ++ +AL+ + A +G A ++ G +Y E
Sbjct: 196 AEQGLADAQYSLGW--MANHGVGVTQDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGT 253
Query: 150 MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
E A+ Y +AA G PAAQ ++ H Y L GRGV
Sbjct: 254 SQDDEKAVGWYYEAARNGVPAAQ-------------VNMGKH----YAL------GRGVQ 290
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK--AQ 267
+ EA WY +AAE G A N L Y G+G P +A +W + AA+ G + A+
Sbjct: 291 QDFDEAMVWYQQAAEYGEPVAYLNVGLLYENGQGRPADPAEAARWYRAAAERGEPRSLAK 350
Query: 268 LEHGLGLFTEG-----EMMKAVVYLELA---TRAGETAADHVKNVIL-QQLSATSRDRAM 318
L H + EG + + A + A R GE A + + + QQL+ + A
Sbjct: 351 LAH---FYAEGISVTPDPVTAWALQDTAMAYDRDGELDAPEERLMQMGQQLAPQQKGEAK 407
Query: 319 LVVDSWR 325
+ SW+
Sbjct: 408 ALAQSWQ 414
>gi|145218916|ref|YP_001129625.1| Sel1 domain-containing protein [Chlorobium phaeovibrioides DSM 265]
gi|145205080|gb|ABP36123.1| Sel1 domain protein repeat-containing protein [Chlorobium
phaeovibrioides DSM 265]
Length = 503
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G R+ G GV ++ +A+ + + A RG A + G+M +D EAA YR
Sbjct: 102 GMRYSEGVGVSQSGTEAMKWYRRAADRGYARAQFNLGVMCDRGRGVPVDYAEAA-KWYRL 160
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AAQ ++ EA+K A+ G V AQY LA G GV
Sbjct: 161 AAGQEVAAAQHNISVLYDEGKGVRRDSTEALKWRRLAAEQGIVEAQYLLAHAYRYGGGVL 220
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +EAA+W+ AA G A + ++ Y +GEG+P +A +W RAA+ G +AQ
Sbjct: 221 RDDREAAKWFKLAAAQGNAYAQFELAVMYDYGEGVPQDKFEAVEWYGRAAEQGVPEAQNS 280
Query: 270 HGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
+ ++ EGE + +++ + LA G++ A + ++ ++D A V
Sbjct: 281 LAV-MYDEGEGLTRNKEESLYWCRLAAEQGDSVAQNNLGWAYREGDGVAKDYAEAV 335
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
+ DKK+ ++L ++ A G+P AQ + EA+K +A+ G+ RAQ
Sbjct: 77 DADKKD--LALLQKEADGGNPKAQFLLGMRYSEGVGVSQSGTEAMKWYRRAADRGYARAQ 134
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L + RGRGV + EAA+WY AA A +N S+ Y G+G+ +A KW
Sbjct: 135 FNLGVMCDRGRGVPVDYAEAAKWYRLAAGQEVAAAQHNISVLYDEGKGVRRDSTEALKWR 194
Query: 256 KRAADCGHGKAQ 267
+ AA+ G +AQ
Sbjct: 195 RLAAEQGIVEAQ 206
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV ++ +A F AA+G+ A + +MY D E
Sbjct: 213 YRYGGGVLRDDREAAKWFKLAAAQGNAYAQFELAVMY---DYGEGV-------------- 255
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + EAV+ +A+ G AQ LA+ G G+ N +E+ W AAE G A
Sbjct: 256 --PQDKFEAVEWYGRAAEQGVPEAQNSLAVMYDEGEGLTRNKEESLYWCRLAAEQGDSVA 313
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
N Y G+G+ + +A KW++ AA G AQ GL ++ EG+ +K
Sbjct: 314 QNNLGWAYREGDGVAKDYAEAVKWLRLAAGQGVTIAQNNLGL-MYLEGQGVK 364
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 23/195 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV K+ +A+ A +G T+A + GLMY E Q
Sbjct: 318 GWAYREGDGVAKDYAEAVKWLRLAAGQGVTIAQNNLGLMYLE-----------GQGVKRD 366
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+P EA++L A+ G+ A + +G+ V+ N +EA +W+ AAE
Sbjct: 367 EP--------EALRLFRLAAAEGNGYACCNIGEMYVKGQVVEQNYEEAMKWFRLAAEKDG 418
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKA 283
A Y Y G+G+ +A KW + A L G GL G + A
Sbjct: 419 NDAAYWIGWLYEEGKGVLADPDEAAKWYRIAEGRKDPNGLLSIGEMYEKGLGVPGSISNA 478
Query: 284 VVYLELATRAGETAA 298
+ A RAGE A
Sbjct: 479 EKWYRKACRAGEKDA 493
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAVL 166
+ +G GV ++ +A++ + + A +G A +MY E + KE ++ R AA
Sbjct: 249 YDYGEGVPQDKFEAVEWYGRAAEQGVPEAQNSLAVMYDEGEGLTRNKEESLYWCRLAAEQ 308
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
GD AQ + EAVK L A+ G AQ L L G+GV +
Sbjct: 309 GDSVAQNNLGWAYREGDGVAKDYAEAVKWLRLAAGQGVTIAQNNLGLMYLEGQGVKRDEP 368
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
EA R + AA G A N Y G+ + ++ +A KW + AA+
Sbjct: 369 EALRLFRLAAAEGNGYACCNIGEMYVKGQVVEQNYEEAMKWFRLAAE 415
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT 276
+ A+GG +A + + YS G G+ S +A KW +RAAD G+ +AQ G+ G
Sbjct: 88 KEADGGNPKAQFLLGMRYSEGVGVSQSGTEAMKWYRRAADRGYARAQFNLGVMCDRGRGV 147
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+ +A + LA AA H +V+ + RD
Sbjct: 148 PVDYAEAAKWYRLAAGQEVAAAQHNISVLYDEGKGVRRD 186
>gi|451948551|ref|YP_007469146.1| Sel1 repeat protein [Desulfocapsa sulfexigens DSM 10523]
gi|451907899|gb|AGF79493.1| Sel1 repeat protein [Desulfocapsa sulfexigens DSM 10523]
Length = 256
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L+ +RF +G G +N KA +LK A +G AM G MY + Q
Sbjct: 34 LMSMAQRFYYGYGTPQNFQKAFSLYLKAAEQGDVDAMFIVGGMY-----------MKGQG 82
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQ--LALCLHRGRGVDFNLQEAARWYLR 221
V+ N EA + LY A+I G + + LA G+ V N +EA WY
Sbjct: 83 TVV--------NTAEAFRWLYNAAINGRSSKESERILAEFFVTGKNVPQNYEEALHWYEL 134
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG--- 278
AA GG A Y G+ +++A W + AA + AQ G+ +T
Sbjct: 135 AANGGDFEAQSELGYLYFTGKVGEKDYKKAAHWFELAARNDYPLAQYNMGILWYTGNGVD 194
Query: 279 --EMMKAVVYLELATRAGETAADHVKNVILQQLSATS-RDRAMLVVDSWRAMPSLH 331
+M+KA + LA G + +N + LS +D ++ +R + SL+
Sbjct: 195 TVDMIKAYAWFSLAAANGYGSGVVAENFLKTVLSDKELKDAQEASMEIYREIKSLN 250
>gi|334129790|ref|ZP_08503593.1| Sel1 domain protein repeat-containing protein [Methyloversatilis
universalis FAM5]
gi|333444826|gb|EGK72769.1| Sel1 domain protein repeat-containing protein [Methyloversatilis
universalis FAM5]
Length = 229
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
PA+ +A + +A+ +GHV AQ + L G G + + W AAE G A
Sbjct: 56 PADLAQAFRWYLRAAESGHVPAQTNVGAMLMMGNGTPTDPERGLHWLRIAAEAGDAMAQS 115
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLE 288
N + Y G+G QA W ++AA GH +Q G GL + + +A +L
Sbjct: 116 NLATLYFKGQGTAQDEVQAAHWYRQAAGQGHFPSQARLGFMYANGLGVDKDRAQAFAWLS 175
Query: 289 LATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
LA + G +A + ++ Q+SA + + + D WR+
Sbjct: 176 LAAQHGVGSALNALEGMIGQMSAEEKQKGAALFDQWRS 213
>gi|420150505|ref|ZP_14657663.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751908|gb|EJF35637.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 278
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+R ++ G GV ++ KA+ + K A +G + GL Y+ YR+
Sbjct: 55 VRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLCYY-----------YRKGV 103
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V + E+A +A+ G+ AQ +L +C H+G+GV + ++A W+ +AA+
Sbjct: 104 V--------QSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAAD 155
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EG---EM 280
+ A CY G G+ S A W ++AA+ G +AQ G F +G
Sbjct: 156 QDFAEAQSFLGYCYYKGLGVVQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSY 215
Query: 281 MKAVVYLELATRAGETAADHV 301
KA+ + E A G+ A +
Sbjct: 216 TKAIFWFEKAANQGDKEAQTI 236
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K L + + G + AQ +LA +G GV + +A WY +AAE G V++ LC
Sbjct: 37 EDFKTLVEKATKGDMEAQVRLATNYEKGIGVPQSFPKAVAWYEKAAEQGDVKSQTKLGLC 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
Y + +G+ S+ +A W ++AA+ G+ +AQ + G+ + +G+ +K
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGV-CYHKGQGVK 140
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL 166
+ + +GV ++ +KA F K A +G A G+ Y + E A+ +++AA
Sbjct: 97 YYYRKGVVQSYEKAAYWFQKAAEQGYAEAQSKLGVCYHKGQGVKQSDEQAVLWFQKAADQ 156
Query: 167 GDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AQ + +AV +A+ G V AQ L +G+G+ +
Sbjct: 157 DFAEAQSFLGYCYYKGLGVVQSDSDAVLWYEKAANQGDVEAQRNLGSYYFKGQGIPQSYT 216
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+A W+ +AA G A CY G G+ S ++A W ++
Sbjct: 217 KAIFWFEKAANQGDKEAQTILGFCYYAGTGVDKSQKRAIYWFEKGC 262
>gi|323453918|gb|EGB09789.1| hypothetical protein AURANDRAFT_24792 [Aureococcus anophagefferens]
Length = 382
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 112 KHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG---- 167
+HG GV+ + KA+ + A RG A + ++ +K E A+ Y +A G
Sbjct: 203 RHGSGVKLDKKKAMKLYRAAADRGDAFAQGNLAVLLSSEEKFEEAVRYYALSADQGYTPG 262
Query: 168 ---------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
D + +A L +A+ G A LA R R + NL+EA RW
Sbjct: 263 ETFLGMCYSDGKGTEVDLGKARYWLERAAAKGDEHAIENLAHLNARLRLYNQNLEEAFRW 322
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ AA+ G A +NT Y G+G+ L+ +AR+++ RAA GHGKA
Sbjct: 323 FKLAADQGLTGAEFNTGFSYLTGKGVELNFEEARRFLSRAAGKGHGKA 370
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 24/220 (10%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
L + ++R G + G GV+ + KA + + A RG ++ G + +K
Sbjct: 83 ELGDVDAMVRLGYLYATGSGVKLDKKKAEELYRAAADRGDAFGQINLGSLLGSEEK---- 138
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
EEA + A+ G A+ L C G G + +L +A
Sbjct: 139 -------------------FEEAFRYFALAADQGCTFAENSLGYCYRDGDGTEVDLGKAR 179
Query: 217 RWYLRAAEGGYVRAMYNTS-LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
W RAA GY A+ N + L G G+ L ++A K + AAD G AQ + L
Sbjct: 180 YWLERAAAKGYDVAIENLARLDARHGSGVKLDKKKAMKLYRAAADRGDAFAQGNLAVLLS 239
Query: 276 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
+E + +AV Y L+ G T + + T D
Sbjct: 240 SEEKFEEAVRYYALSADQGYTPGETFLGMCYSDGKGTEVD 279
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG-----STLAMVDA----GLMYWEMDKKEAAIS 158
G ++ G G +L KA + AA+G LA +DA G+ ++DKK+A +
Sbjct: 162 GYCYRDGDGTEVDLGKARYWLERAAAKGYDVAIENLARLDARHGSGV---KLDKKKA-MK 217
Query: 159 LYRQAAVLGDPAAQPANA---------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
LYR AA GD AQ A EEAV+ ++ G+ + L +C G+G +
Sbjct: 218 LYRAAADRGDAFAQGNLAVLLSSEEKFEEAVRYYALSADQGYTPGETFLGMCYSDGKGTE 277
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+L +A W RAA G A+ N + + + +A +W K AAD G A+
Sbjct: 278 VDLGKARYWLERAAAKGDEHAIENLAHLNARLRLYNQNLEEAFRWFKLAADQGLTGAEFN 337
Query: 270 HGLGLFT 276
G T
Sbjct: 338 TGFSYLT 344
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++AA+ Y RA E G V AM Y+ G G+ L ++A + + AAD G Q+ G
Sbjct: 72 KKAAKIYRRAVELGDVDAMVRLGYLYATGSGVKLDKKKAEELYRAAADRGDAFGQINLGS 131
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
L +E + +A Y LA G T A++ + T D
Sbjct: 132 LLGSEEKFEEAFRYFALAADQGCTFAENSLGYCYRDGDGTEVD 174
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 104 LLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAI 157
+ G ++ GR G+ K+ KA + + G AMV G +Y ++DKK+A
Sbjct: 53 ITNLGNAYRFGRVGLVKSDKKAAKIYRRAVELGDVDAMVRLGYLYATGSGVKLDKKKAE- 111
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
LYR AA GD Q + L G + +EA R
Sbjct: 112 ELYRAAADRGDAFGQ---------------------------INLGSLLGSEEKFEEAFR 144
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
++ AA+ G A + CY G+G + +AR W++RAA G+
Sbjct: 145 YFALAADQGCTFAENSLGYCYRDGDGTEVDLGKARYWLERAAAKGY 190
>gi|213586863|ref|ZP_03368689.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 267
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 31 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 90
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 91 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 150
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA--- 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 151 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYT 210
Query: 260 -----DCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 292
DC A+ G T ++ + +L R
Sbjct: 211 EKSKDDCSALIAERNRLKGTLTPDQLSETYAAFDLIRR 248
>gi|422013722|ref|ZP_16360340.1| hypothetical protein OOA_03159 [Providencia burhodogranariea DSM
19968]
gi|414102234|gb|EKT63827.1| hypothetical protein OOA_03159 [Providencia burhodogranariea DSM
19968]
Length = 263
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 24/187 (12%)
Query: 76 FTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
F + +A + KS D P +A + G + G GV + +K+L+ +LK A++
Sbjct: 85 FEIDYNKAMEWLLKSAKDN-NPRAQAYI----GYIYSRGLGVTLDYNKSLEWYLKSASQN 139
Query: 136 STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQ 195
LA + +Y+E G Q N ++A++ +++ +G+++A
Sbjct: 140 FGLAQNNIATLYYE-----------------GHGVKQ--NYQKAMEWFSKSANSGYIQAN 180
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+A G GV+ N +E Y+++A AMYN Y G G+P+ ++A++W
Sbjct: 181 NNMAYLYQNGLGVEINYKETMNLYMKSALTNDGYAMYNIGYLYEKGLGVPIDIKKAKEWY 240
Query: 256 KRAADCG 262
++A + G
Sbjct: 241 EKANELG 247
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 41/238 (17%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRP-LREAM--VLLRWGKRFKHGRGVRKN 120
LP V+ I S+ + + ND + P L++++ L G F +
Sbjct: 6 LPLPVIFAIFVSYN---------IYATSNDNVIPTLKKSISEFQLSMGNSFYN----HHE 52
Query: 121 LDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQPAN 175
L KA ++L A G++ A G Y +E+D +A L + A +P AQ
Sbjct: 53 LHKAKQNYLLSAENGNSEAQAIVGNFYINGELFEIDYNKAMEWLLKSAKD-NNPRAQAYI 111
Query: 176 AEE-----AVKLLYQASIAGHVR--------AQYQLALCLHRGRGVDFNLQEAARWYLRA 222
V L Y S+ +++ AQ +A + G GV N Q+A W+ ++
Sbjct: 112 GYIYSRGLGVTLDYNKSLEWYLKSASQNFGLAQNNIATLYYEGHGVKQNYQKAMEWFSKS 171
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
A GY++A N + Y G G+ +++++ ++A G A E GLG+
Sbjct: 172 ANSGYIQANNNMAYLYQNGLGVEINYKETMNLYMKSALTNDGYAMYNIGYLYEKGLGV 229
>gi|228471791|ref|ZP_04056564.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276944|gb|EEK15639.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
Length = 372
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 168 DPAAQPANAEEAVKLL--YQASIAGHVRAQYQ-LALCLHRGRGVDFNLQEAARWYLRAAE 224
D + E+A L Y+ + G QY L + G+GV + +EA+ +Y +AAE
Sbjct: 86 DNTFEGGEFEKAFSLYIKYKQELNGE---QYNNLGWMYYFGKGVTIDYKEASYYYQKAAE 142
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
G M+N +CY G+G P ++ W+K AA G K+ + GL ++EG +
Sbjct: 143 AGNSDGMFNLGICYYSGKGTPYDAKKGMYWLKEAASEGSSKSMYQLGLTYYSEGFEKETF 202
Query: 285 VYLELATRAGET 296
+L+ A +G T
Sbjct: 203 YWLKKAIESGYT 214
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ +EA +A+ AG+ + L +C + G+G ++ ++ W AA G ++MY
Sbjct: 129 DYKEASYYYQKAAEAGNSDGMFNLGICYYSGKGTPYDAKKGMYWLKEAASEGSSKSMYQL 188
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL------GLFTEGEMMKAVVYL- 287
L Y + EG ++ W+K+A + G+ + ++ + L G T + +A Y
Sbjct: 189 GLTY-YSEGFE---KETFYWLKKAIESGYTEREVYYLLARCYYYGKGTSQDYEQAFFYFR 244
Query: 288 -ELATRAGETAADHV 301
++ R T+ ++V
Sbjct: 245 KDIENRNDYTSMNYV 259
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 25/171 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV + +A + K A G++ M + G+ Y+
Sbjct: 120 YYFGKGVTIDYKEASYYYQKAAEAGNSDGMFNLGICYY-------------------SGK 160
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR- 229
P +A++ + L +A+ G ++ YQL L + G + +E W +A E GY
Sbjct: 161 GTPYDAKKGMYWLKEAASEGSSKSMYQLGLTYYS-EGFE---KETFYWLKKAIESGYTER 216
Query: 230 -AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y + CY +G+G + QA + ++ + + + + ++ EG+
Sbjct: 217 EVYYLLARCYYYGKGTSQDYEQAFFYFRKDIENRNDYTSMNYVGSMYEEGK 267
>gi|188025893|ref|ZP_02960184.2| hypothetical protein PROSTU_02101 [Providencia stuartii ATCC 25827]
gi|188020880|gb|EDU58920.1| Sel1 repeat protein [Providencia stuartii ATCC 25827]
Length = 353
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+K L AS G + AQ+ LAL RG GV + +A W++RAA+ G A Y T CY
Sbjct: 253 AIKWLTLASEQGEISAQFNLALIYARGDGVPADQAKACHWFIRAAQHGNNDAQYATGACY 312
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+G G+ R+A W K AA G+ +A+
Sbjct: 313 QYGMGVKQDDRKALYWYKLAASQGNERAE 341
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN ++A + +++ G AQ L + G+GV ++ A +W A+E G + A +N
Sbjct: 212 ANYQQAYQYFSRSAQLGFSPAQNSLGMLYLHGQGVKKEVKSAIKWLTLASEQGEISAQFN 271
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 289
+L Y+ G+G+P +A W RAA G+ AQ G G+ + + KA+ + +L
Sbjct: 272 LALIYARGDGVPADQAKACHWFIRAAQHGNNDAQYATGACYQYGMGVKQDDRKALYWYKL 331
Query: 290 ATRAGETAADHVKNVILQ 307
A G A+ K +IL+
Sbjct: 332 AASQGNERAEK-KVLILE 348
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A P + + +LL +++ G AQ+ LA+ L + L EAA+WY +A+ G+ +A
Sbjct: 31 AAPLSPPQDKQLLLKSAQDGQAEAQFNLAMLLQSEK----QLTEAAKWYRLSAQQGFTKA 86
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +L Y G G+ S Q WMK+AA+ G QL
Sbjct: 87 QINLALLYQQGNGVDKSPEQMLFWMKKAAEAGDPLGQL 124
>gi|315224578|ref|ZP_07866404.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea F0287]
gi|314945444|gb|EFS97467.1| Sel1 domain protein repeat-containing protein [Capnocytophaga
ochracea F0287]
Length = 815
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q AN ++ +KL + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 19 QDANVKKLIKL----AEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 729 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 788
Query: 251 ARKWMKRAADCGHGK 265
A W ++A D G K
Sbjct: 789 AADWFEQACDNGEKK 803
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV K+ KA++ K A G AM G Y+ Y + ++G
Sbjct: 222 YLEGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNFYF-----------YGNSPLIGK-- 268
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV-R 229
++A+ QA+ G+ AQ QLALC + G G + + ++A W L++ +
Sbjct: 269 ----YYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSVNTNPTPK 324
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM--MKAVVYL 287
A N +CY+ G G S+ QA + ++AA+ G AQ G L EG++ K YL
Sbjct: 325 AQNNLGVCYAVGIGAHPSNAQALESFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYL 384
Query: 288 E 288
E
Sbjct: 385 E 385
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV L + + G + AQYQLA C G+GV + Q+ W + A+ G A +L
Sbjct: 56 QEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G+G+ S + +++ A+ + + QL+ + G ++ KA + E A++
Sbjct: 116 CYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASK 175
Query: 293 AGETAAD 299
G + A+
Sbjct: 176 NGNSEAE 182
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL---RAAEGGYVR 229
P + ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y + AE
Sbjct: 88 PKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIEKHAEKENPE 144
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + Y GEG+ +A+ W ++A+ G+ +A++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEM 183
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
V L K + G GV K+++KA + + G++ A + +E++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEMLLASWAYEIN----------- 193
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
A+ P EA++ L Q + G+ AQ LA G+GV+ + +A +A
Sbjct: 194 -------ASNP----EAIERLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKA 242
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPL---SHRQARKWMKRAADCGH 263
A+GG AMY Y +G PL +++A + +AA+ G+
Sbjct: 243 AKGGDAEAMYQLGNFYFYGNS-PLIGKYYKKAINYYTQAANKGN 285
>gi|386334995|ref|YP_006031166.1| hypothetical protein RSPO_c03339 [Ralstonia solanacearum Po82]
gi|334197445|gb|AEG70630.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
Length = 252
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
A D F + A RG+ LA D +M L R + P E AVK L
Sbjct: 64 AFDEFAEAAQRGNRLAQFDYAMM------------LMRGEGTVAQP-------EAAVKWL 104
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ AQ+ RG V +L EA +WY RAA GG++ A + Y G G
Sbjct: 105 RRAADNQMTHAQFVYGELFERGELVPRSLPEANKWYERAATGGHIEAQRALATNYFTGRG 164
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+P + +A W K+AA+ G G +Q
Sbjct: 165 VPRDYGRAFIWYKKAAEAGDGPSQ 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 70 EAAQRGNRLAQFDYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFVYGELFERGELV 129
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADH 300
P S +A KW +RAA GH +AQ FT + +A ++ + A AG+ + +
Sbjct: 130 PRSLPEANKWYERAATGGHIEAQRALATNYFTGRGVPRDYGRAFIWYKKAAEAGDGPSQY 189
Query: 301 V 301
+
Sbjct: 190 I 190
>gi|294670085|ref|ZP_06735035.1| Sel1 repeat protein [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308128|gb|EFE49371.1| Sel1 repeat protein [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 474
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM-----VD-----AGLMYWE 149
+A+ LL G ++G G+ +L+KA + GS +AM +D A Y +
Sbjct: 284 DALCLL--GDIRQYGLGIHADLEKARSYYDHAVKYGSLVAMQRLLMLDSRSHVANPTYNQ 341
Query: 150 --MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ +++ Y+ L P + E A A+ GH +AQ L + + G G
Sbjct: 342 EVLEFQQSVERNYQSGFALHYGIGVPQDFESAFAYYSLAARNGHPKAQTNLGMMYYNGEG 401
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
++ N ++AARW+ +AA G A YN + + G G+P A KW++ A D GH
Sbjct: 402 IEANPKQAARWFTQAATQGDTTAQYNLAFLHYSGTGVPQDTAVACKWLQTAIDSGH 457
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 150 MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
M + E A S ++QA L A P + A+ LL QA+ AGH A +QL C+ G G D
Sbjct: 1 MTETENADSTFQQAQKL--LTAMPPDYATALPLLEQAAEAGHAEAAFQLGGCMQYGMGTD 58
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSL 236
N +A W +AAEGG+ A YN +L
Sbjct: 59 PNRVQATYWLRKAAEGGHTTARYNLAL 85
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 27/164 (16%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEA 179
N+ L ++L A G A V + Y+ K + A+ +QAA P AQ
Sbjct: 93 NIQSVLPAYLSLAEEGHIDAQVRV-MHYYAEQKDDRALYWAKQAAQKHHPQAQ------- 144
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
L L H + NL A + Y +AA G V A + + +
Sbjct: 145 ------------------LFLAQHYQKDGSLNLPAAHQLYQQAAAQGIVSAHWQLANQFL 186
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
G+G+ +H QA ++ AA+ G AQ E G L EG+ + A
Sbjct: 187 HGQGVVKNHTQALYHLRIAANAGIPAAQAELG-KLLLEGQHLPA 229
>gi|420150362|ref|ZP_14657522.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394752421|gb|EJF36123.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 811
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q AN ++ +KL + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 19 QDANVKKLIKL----AEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 725 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 784
Query: 251 ARKWMKRAADCGHGKA 266
A W ++A D G KA
Sbjct: 785 AADWFEQACDNGEKKA 800
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV K+ KA++ K A G AM G Y+ Y + ++G
Sbjct: 222 YLEGKGVEKSEAKAIEMLEKAAKGGDAEAMYQLGNFYF-----------YGNSPLIGK-- 268
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV-R 229
++A+ QA+ G+ AQ QLALC + G G + + ++A W L++ +
Sbjct: 269 ----YYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKDAFSWILKSVNTNPTPK 324
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM--MKAVVYL 287
A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++ K YL
Sbjct: 325 AQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYL 384
Query: 288 E 288
E
Sbjct: 385 E 385
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV L + + G + AQYQLA C G+GV + Q+ W + A+ G A +L
Sbjct: 56 QEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G+G+ S + + +++ A+ + + QL+ + G ++ KA + E A++
Sbjct: 116 CYRDGKGVEQSKEKYYRLIEKHAEKENSEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASK 175
Query: 293 AGETAAD 299
G + A+
Sbjct: 176 NGNSEAE 182
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + ++ V+ L + + AG+ AQ +LALC G+GV+ + ++ R + AE
Sbjct: 88 PKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVEQSKEKYYRLIEKHAEKENSEVQL 147
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + Y GEG+ +A+ W ++A+ G+ +A+L
Sbjct: 148 DLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEL 183
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
V L K + G GV K+++KA + + G++ A + +E++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAELLLASWTYEVN----------- 193
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
A+ P EA+K L Q + G+ AQ LA G+GV+ + +A +A
Sbjct: 194 -------ASNP----EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKA 242
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPL---SHRQARKWMKRAADCGH 263
A+GG AMY Y +G PL +++A + +AA+ G+
Sbjct: 243 AKGGDAEAMYQLGNFYFYGNS-PLIGKYYKKAINYYTQAANKGN 285
>gi|299772021|ref|YP_003734047.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
oleivorans DR1]
gi|298702109|gb|ADI92674.1| TPR repeat-containing SEL1 subfamily protein [Acinetobacter
oleivorans DR1]
Length = 230
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K+ +A D F K AA+G A + G++Y D+ E Y QA
Sbjct: 83 GMLYYTGTGVEKDPKRAFDYFTKAAAKGHAKAQYNLGVLY---DRGEGTAQNYVQA---- 135
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 136 ------------FEWFSRAANQGYPPAEYNLAHLYKKGHGVSQSDEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 184 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 218
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G++Y Y V DP
Sbjct: 54 QGVVKNYEQAFKWLTAADQNGSVGAKYSLGMLY------------YTGTGVEKDP----- 96
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ A +A+ GH +AQY L + RG G N +A W+ RAA GY A YN
Sbjct: 97 --KRAFDYFTKAAAKGHAKAQYNLGVLYDRGEGTAQNYVQAFEWFSRAANQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S QA KW +AA+ H ++ ++ L ++ GE L+LA +
Sbjct: 155 AHLYKKGHGVSQSDEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKW 210
Query: 294 GETAAD 299
+ AAD
Sbjct: 211 FQQAAD 216
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAM 231
PA AE +V + + G AQY L + L G +GV N ++A +W A + G V A
Sbjct: 20 PAFAEPSVADIQYRAEQGQAVAQYHLGMMLLSGEQGVVKNYEQAFKWLTAADQNGSVGAK 79
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y+ + Y G G+ ++A + +AA GH KAQ G+ L+ GE
Sbjct: 80 YSLGMLYYTGTGVEKDPKRAFDYFTKAAAKGHAKAQYNLGV-LYDRGE 126
>gi|344942723|ref|ZP_08782010.1| heat shock protein DnaJ domain protein [Methylobacter tundripaludum
SV96]
gi|344260010|gb|EGW20282.1| heat shock protein DnaJ domain protein [Methylobacter tundripaludum
SV96]
Length = 222
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA L Q++ GH +AQ+ L L +G+ V + EA WY +AAE G A YN +L
Sbjct: 134 EAFSLYRQSAELGHAKAQFNLGLMYDQGQYVTQDYAEAVSWYSKAAEQGNANAQYNLALK 193
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ G+G+ + +A W +RAA+ G+ KA
Sbjct: 194 FQSGQGVVQDNTKAAYWYRRAAEEGNAKA 222
>gi|452966969|gb|EME71976.1| TPR repeat-containing SEL1 subfamily protein [Magnetospirillum sp.
SO-1]
Length = 390
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 87 VCKSWNDALRPLREA------MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
V +S AL+ REA G + GRGV + + A F + A +G A+
Sbjct: 207 VAQSNAHALKWFREAAKQGDPQAQFNLGNMIRQGRGVEASPEVAAKWFKQAADQGDAGAI 266
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
G +Y EA + R + +AV+L QA+ G A + LA
Sbjct: 267 FALGALY------EAGAGVER-------------DETQAVELYRQAADQGLATALHNLAN 307
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
L +GRG D + EAA RAAE G A YN ++ + G G+ A +W +RAAD
Sbjct: 308 MLRQGRGTDPDPTEAAMLCRRAAEQGLAEAQYNYAVMLALGVGVEQDEAAAIRWFRRAAD 367
Query: 261 CGHGKAQLE 269
G + +++
Sbjct: 368 SGDARGEVQ 376
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVKL QA+ AG R QY L + +G GV + A +W+ AA+ G +A +N
Sbjct: 177 EAVKLYTQAAKAGDARGQYSLGVMYDQGLGVAQSNAHALKWFREAAKQGDPQAQFNLGNM 236
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAV-VYLELATR 292
G G+ S A KW K+AAD G A G G E + +AV +Y + A +
Sbjct: 237 IRQGRGVEASPEVAAKWFKQAADQGDAGAIFALGALYEAGAGVERDETQAVELYRQAADQ 296
Query: 293 AGETAADHVKNVILQ 307
TA ++ N++ Q
Sbjct: 297 GLATALHNLANMLRQ 311
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
+A ++ G ++ G+GV +L +A+ + + A G G+MY +
Sbjct: 154 DAAAMVALGNAYREGKGVAPDLGEAVKLYTQAAKAGDARGQYSLGVMYDQGLGVAQSNAH 213
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ +R+AA GDP AQ A+ E A K QA+ G A + L
Sbjct: 214 ALKWFREAAKQGDPQAQFNLGNMIRQGRGVEASPEVAAKWFKQAADQGDAGAIFALGALY 273
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV+ + +A Y +AA+ G A++N + G G +A +RAA+ G
Sbjct: 274 EAGAGVERDETQAVELYRQAADQGLATALHNLANMLRQGRGTDPDPTEAAMLCRRAAEQG 333
Query: 263 HGKAQLEH----GLGLFTEGEMMKAVVYLELATRAGET 296
+AQ + LG+ E + A+ + A +G+
Sbjct: 334 LAEAQYNYAVMLALGVGVEQDEAAAIRWFRRAADSGDA 371
>gi|282600129|ref|ZP_05973126.2| Sel1 protein [Providencia rustigianii DSM 4541]
gi|282566530|gb|EFB72065.1| Sel1 protein [Providencia rustigianii DSM 4541]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 20/153 (13%)
Query: 127 SFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQA 186
+ K A +G+ A++ G +Y+E G Q + ++ +L+ QA
Sbjct: 36 ALCKAAEQGNEDALIMLGTLYYE-----------------GKGVKQ--DFKKTAQLISQA 76
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
++ G+ RAQ L + G+GV + EAA+WY AAE GY A + Y G+G+PL
Sbjct: 77 ALKGNARAQTILGAMYYEGKGVGQDYSEAAKWYKLAAEQGYSMAQGQLATLYYMGKGVPL 136
Query: 247 SHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
++ A KW AA+ G +Q G ++ EG+
Sbjct: 137 DYQIASKWFMEAAEQGDSYSQALLG-AMYYEGK 168
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
+A+++L G + G+GV+++ K + A +G+ A G MY+E
Sbjct: 46 EDALIML--GTLYYEGKGVKQDFKKTAQLISQAALKGNARAQTILGAMYYE--------- 94
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
G Q + EA K A+ G+ AQ QLA + G+GV + Q A++W
Sbjct: 95 --------GKGVGQ--DYSEAAKWYKLAAEQGYSMAQGQLATLYYMGKGVPLDYQIASKW 144
Query: 219 YLRAAEGG--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
++ AAE G Y +A+ Y G+G+ + A KW+K+A++ + KA G LF
Sbjct: 145 FMEAAEQGDSYSQALLGA--MYYEGKGVDKDSKIAAKWLKKASEQNNPKAHFILGF-LFL 201
Query: 277 EGE 279
G+
Sbjct: 202 TGD 204
>gi|255068259|ref|ZP_05320114.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
gi|255047451|gb|EET42915.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
Length = 126
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G AQY L + G+GV + +A +WY +AAE G+ +A YN + Y G+G+
Sbjct: 34 QAAEQGFAAAQYNLGVMYDNGQGVRQDDAQAVQWYRKAAEQGHAKAQYNLGVAYINGQGV 93
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+ QA +W +AA+ G+ KAQ G+ ++ +G
Sbjct: 94 RQDYAQAVQWFGKAAEQGYAKAQYNLGV-MYDKG 126
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV+ +A+ GH +AQY L + G+GV + +A +W+ +AAE GY +A YN +
Sbjct: 63 QAVQWYRKAAEQGHAKAQYNLGVAYINGQGVRQDYAQAVQWFGKAAEQGYAKAQYNLGVM 122
Query: 238 YSFG 241
Y G
Sbjct: 123 YDKG 126
>gi|171912508|ref|ZP_02927978.1| Sel1 domain protein repeat-containing protein [Verrucomicrobium
spinosum DSM 4136]
Length = 231
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEA 179
++ KA + + AA+G A GL+Y + + P + E
Sbjct: 71 DMGKAFHWYKEAAAKGYAEAQAALGLIYMKGE-------------------GTPEDYAEG 111
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
K QAS GH AQ LA C G G+ +L+EAARW+ +AE A Y + Y
Sbjct: 112 AKWFRQASEQGHPVAQMNLASCYANGHGLPRDLKEAARWFRESAERNEPMAQYYLGILYG 171
Query: 240 FGEGLPLSHRQARKWMKRAADCG 262
GEG+P S+ +A KW+ +A G
Sbjct: 172 RGEGVPQSYIEAYKWLTASAAQG 194
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ L L +G G + E A+W+ +A+E G+ A N + CY+ G GL
Sbjct: 81 EAAAKGYAEAQAALGLIYMKGEGTPEDYAEGAKWFRQASEQGHPVAQMNLASCYANGHGL 140
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
P ++A +W + +A+ AQ G+ L+ GE
Sbjct: 141 PRDLKEAARWFRESAERNEPMAQYYLGI-LYGRGE 174
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH-RGRGVDFNLQEAARWYLRAA 223
V DP + +K L ++AG AQ LA+ R R D ++ +A WY AA
Sbjct: 31 VTADPVVE-------LKDLEAKALAGEGAAQLALAIRYDGRERSDDHDMGKAFHWYKEAA 83
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
GY A L Y GEG P + + KW ++A++ GH AQ+
Sbjct: 84 AKGYAEAQAALGLIYMKGEGTPEDYAEGAKWFRQASEQGHPVAQM 128
>gi|118350855|ref|XP_001008706.1| sel1 repeat protein [Tetrahymena thermophila]
gi|89290473|gb|EAR88461.1| sel1 repeat protein [Tetrahymena thermophila SB210]
Length = 287
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 58/233 (24%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+G+ ++L+KA++ + K A +G + G +Y++ A
Sbjct: 41 LEEGKGIEQDLEKAIEWYTKSAEKGEAKSQYCLGNLYYQ-------------------GA 81
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALC----------------------------- 201
A N +EA+K AS GH +A +QL L
Sbjct: 82 AVQQNFQEAIKWYNLASKQGHDKALFQLGLMQIFGQGFKQDFQKGIDYFKKSGERGNQDA 141
Query: 202 ------LHR-GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
++R G GV N +EA ++YL A EG AM N + Y G G+ S+ +A K+
Sbjct: 142 YNNLGNMYREGTGVKVNYEEAVKYYLMACEGECAAAMANLATLYIQGLGVNQSYEEAAKY 201
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGEMMKAVVY--LELATRAGETAADHVKNVI 305
K+AAD G AQ G L+ EG+ +K + LE + GE ++
Sbjct: 202 FKKAADLGLDIAQFNLGC-LYEEGKGVKKDLQMALEYYRKGGENGNQEAEDAF 253
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E A + Y + G AQY + L L G+G++ +L++A WY ++AE G ++ Y
Sbjct: 16 EAAARYYYTLANKGDPYAQYVIGLLLEEGKGIEQDLEKAIEWYTKSAEKGEAKSQYCLGN 75
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL-GLFTEG---EMMKAVVYLELA-T 291
Y G + + ++A KW A+ GH KA + GL +F +G + K + Y + +
Sbjct: 76 LYYQGAAVQQNFQEAIKWYNLASKQGHDKALFQLGLMQIFGQGFKQDFQKGIDYFKKSGE 135
Query: 292 RAGETAADHVKNV 304
R + A +++ N+
Sbjct: 136 RGNQDAYNNLGNM 148
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQAS 187
+D L + EAA Y A GDP AQ + E+A++ +++
Sbjct: 3 LDEALKTQKFKSDEAAARYYYTLANKGDPYAQYVIGLLLEEGKGIEQDLEKAIEWYTKSA 62
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G ++QY L ++G V N QEA +WY A++ G+ +A++ L FG+G
Sbjct: 63 EKGEAKSQYCLGNLYYQGAAVQQNFQEAIKWYNLASKQGHDKALFQLGLMQIFGQGFKQD 122
Query: 248 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAA 298
++ + K++ + G+ A G ++ EG +K AV Y +A GE AA
Sbjct: 123 FQKGIDYFKKSGERGNQDAYNNLG-NMYREGTGVKVNYEEAVKYYLMACE-GECAA 176
>gi|114569086|ref|YP_755766.1| peptidoglycan binding domain-containing protein [Maricaulis maris
MCS10]
gi|114339548|gb|ABI64828.1| Peptidoglycan-binding domain 1 protein [Maricaulis maris MCS10]
Length = 1072
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
LG A +A A LL +A+ G AQY+ L G GV+ NL++A RW RAA
Sbjct: 823 LGVRALDAGDAATAAILLRRAAEQGVPAAQYRFGKLLETGEGVEINLEDARRWTERAANA 882
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G+ RAM+N + Y +G G + A +W + AA G +Q L L+ G+
Sbjct: 883 GHRRAMHNLGVMYYYGSGAAQNMETAARWFQEAALLGLRDSQFNLAL-LYETGD 935
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEE 178
AA G+ +A G+ + A L R+AA G PAAQ N E+
Sbjct: 812 AAEGNPVARYQLGVRALDAGDAATAAILLRRAAEQGVPAAQYRFGKLLETGEGVEINLED 871
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A + +A+ AGH RA + L + + G G N++ AARW+ AA G + +N +L Y
Sbjct: 872 ARRWTERAANAGHRRAMHNLGVMYYYGSGAAQNMETAARWFQEAALLGLRDSQFNLALLY 931
Query: 239 SFGEGLPLSHRQARKWMKRAA 259
G+G+PLS A W AA
Sbjct: 932 ETGDGVPLSLPDAFAWFSIAA 952
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R+GK + G GV NL+ A + A G AM + G+MY+
Sbjct: 854 RFGKLLETGEGVEINLEDARRWTERAANAGHRRAMHNLGVMYY----------------- 896
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
G AAQ N E A + +A++ G +Q+ LAL G GV +L +A W+ AA
Sbjct: 897 YGSGAAQ--NMETAARWFQEAALLGLRDSQFNLALLYETGDGVPLSLPDAFAWFSIAA 952
>gi|189502322|ref|YP_001958039.1| hypothetical protein Aasi_0951 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497763|gb|ACE06310.1| hypothetical protein Aasi_0951 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1141
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMY-----WEMD-KKEAAISLYRQAAVLGDPAA----- 171
K L + A RG T A +Y W + + A+ Y +AA GD A
Sbjct: 875 KILGLYTDAARRGHTRAQFKLATIYQNGEAWGISVNPKKALGWYTEAASKGDREACFKLA 934
Query: 172 ---------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
Q AN EEA K + G ++AQ ++A +G G+ + EA +WY RA
Sbjct: 935 DMYYKGEGIQAANYEEAFKWYMTLAPQGEIKAQLKVAKMYRKGIGIKQDYIEALKWYTRA 994
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
G V++ YN + Y G +A K+ ++AA G AQ+E G+ ++ + E +
Sbjct: 995 LRRGNVKSQYNIAKIYQKGWSGHKDEDKALKYYEKAARQGLFNAQVEAGI-IYQKRENYE 1053
Query: 283 AVVYLELATRAGETAADHVKN 303
+ EL ++A E D VKN
Sbjct: 1054 KTI--ELYSKATEN-IDAVKN 1071
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGR--GVDFNLQEAARWYLRAAEGGYVRAMYNT 234
++ + L A+ GH RAQ++LA G G+ N ++A WY AA G A +
Sbjct: 874 QKILGLYTDAARRGHTRAQFKLATIYQNGEAWGISVNPKKALGWYTEAASKGDREACFKL 933
Query: 235 SLCYSFGEGLPLS-HRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLEL 289
+ Y GEG+ + + +A KW A G KAQL+ + G+ + + ++A+ +
Sbjct: 934 ADMYYKGEGIQAANYEEAFKWYMTLAPQGEIKAQLKVAKMYRKGIGIKQDYIEALKWYTR 993
Query: 290 ATRAGETAADHVKNVILQQLSATSRD 315
A R G + + I Q+ + +D
Sbjct: 994 ALRRGNVKSQYNIAKIYQKGWSGHKD 1019
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)
Query: 96 RPLREAMVLLRW--GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
R LR V ++ K ++ G K+ DKAL + K A +G A V+AG++Y + +
Sbjct: 993 RALRRGNVKSQYNIAKIYQKGWSGHKDEDKALKYYEKAARQGLFNAQVEAGIIYQKRENY 1052
Query: 154 EAAISLYRQAAV-----------------LGDPAAQPANAEEAVKLLYQASIAGHVRAQY 196
E I LY +A LG + N ++A + + + G+ A
Sbjct: 1053 EKTIELYSKATENIDAVKNNKKFAHVQFNLGLLYEKQENYDKAFQYYEKVASQGYASANT 1112
Query: 197 QLALCLHRGRGVDFNLQEAARWYLRAAE 224
+L G+GV+ N+++A +Y + +
Sbjct: 1113 KLGWMYQHGKGVEINMEKALEYYSKGVQ 1140
>gi|261330089|emb|CBH13073.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 319
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + ++A+KLL A + H A Q+ LCL G GV +L A W RAA+ GY AMY
Sbjct: 164 PGDIDDALKLLDSAIASRHAGAMLQVGLCLRDGVGVPIDLSAALTWVERAADSGYAPAMY 223
Query: 233 NTSLCYS-----FGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ Y G+ LP +A + + AA+ GH AQL G
Sbjct: 224 ELGVMYEDGVEIGGKCLPSDWGEALRLYRGAAELGHTMAQLNVG 267
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
LA L + + ++ +A + A + AM LC G G+P+ A W++R
Sbjct: 153 LAEFLLKQKNAPGDIDDALKLLDSAIASRHAGAMLQVGLCLRDGVGVPIDLSAALTWVER 212
Query: 258 AADCGHGKAQLEHGLGLFTEG 278
AAD G+ A E G+ ++ +G
Sbjct: 213 AADSGYAPAMYELGV-MYEDG 232
>gi|123437585|ref|XP_001309587.1| TKL family protein kinase [Trichomonas vaginalis G3]
gi|121891320|gb|EAX96657.1| TKL family protein kinase [Trichomonas vaginalis G3]
Length = 1103
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 81 LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
LR A+ +CK A EAM + K+G+GV+ N A SF+ A RG AM
Sbjct: 861 LRKAAYMCKL--SAESGNVEAM--YTFANIVKNGQGVQSNSVDAHSSFVLAADRGHVKAM 916
Query: 141 VDAGLMYWEMDKK-EAAISLYRQAA-------------VLGDPAAQPANAEEAVKLLYQA 186
+ A W ++K A+ Y+ AA L + + +A + A
Sbjct: 917 LAAAYYMWTVEKDLPKALKYYKMAADQQDCDGLSSYGHFLAEGLGCNKDPVKAAECFRAA 976
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLP 245
++ G Y A+ L G GV+ ++ AA++Y AA+ G V A + S + G EG
Sbjct: 977 ALMGSTLGMYNYAVTLQTGNGVERDITSAAKFYKMAADRGDVDACIHYSQLLATGWEGNQ 1036
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVK 302
+Q+ + K+AAD G+ + ++G L+ + K R +TAA ++K
Sbjct: 1037 KDLQQSANYAKKAADLGNPRGMFQYGKMLWYGTGVQK---------RDQQTAASYIK 1084
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
SLY ++ D + + +K L +A+ GH AQY+ + L++G V N AA
Sbjct: 345 SLYYLGKMIIDGKINNYDKIQGIKFLKKAAEGGHAEAQYECGMALYKGEDVGCNKIMAAE 404
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LG 273
++ +AA+ A+ S G+G+ +S +++K ++ AD + + G G
Sbjct: 405 FFKQAAKSYLPGAIIMLSKMLLVGDGVEMSKAKSKKLLQILADKQNVECAFILGKYSYTG 464
Query: 274 LFTEGEMMKAVVYLELATRAGETAA 298
F E ++ A YLE A +G + A
Sbjct: 465 EFGEKDLATAEKYLEFAANSGNSEA 489
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A Y A+ GH A + + L G GV +L++AA +AE G V AMY +
Sbjct: 827 KAAIYFYDAAKNGHSGAMLECSNFLSNGMGVKKDLRKAAYMCKLSAESGNVEAMYTFANI 886
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT-EGEMMKAVVYLELA 290
G+G+ + A AAD GH KA L ++T E ++ KA+ Y ++A
Sbjct: 887 VKNGQGVQSNSVDAHSSFVLAADRGHVKAMLAAAYYMWTVEKDLPKALKYYKMA 940
Score = 45.4 bits (106), Expect = 0.036, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
++Y A +L + +A+++ + +A+ GH+ A+YQ L RG G +L +AA
Sbjct: 772 AMYEYALILA-AESNKYSAQQSAIYMKKAADKGHLEAKYQCGNYLVRGFGTKQDLSKAAI 830
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
++ AA+ G+ AM S S G G+ R+A K +A+ G+ +A
Sbjct: 831 YFYDAAKNGHSGAMLECSNFLSNGMGVKKDLRKAAYMCKLSAESGNVEA 879
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFT 276
+ AE G + AMY +L + E S +Q+ +MK+AAD GH +A+ + G G T
Sbjct: 763 KKAESGDINAMYEYALILA-AESNKYSAQQSAIYMKKAADKGHLEAKYQCGNYLVRGFGT 821
Query: 277 EGEMMKAVVYLELATRAGETAA 298
+ ++ KA +Y A + G + A
Sbjct: 822 KQDLSKAAIYFYDAAKNGHSGA 843
Score = 41.2 bits (95), Expect = 0.69, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 30/214 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G G G +++L KA F A G + AM++ + L
Sbjct: 812 GNYLVRGFGTKQDLSKAAIYFYDAAKNGHSGAMLEC-------------------SNFLS 852
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + +A + ++ +G+V A Y A + G+GV N +A ++ AA+ G+
Sbjct: 853 NGMGVKKDLRKAAYMCKLSAESGNVEAMYTFANIVKNGQGVQSNSVDAHSSFVLAADRGH 912
Query: 228 VRAMYNTS-LCYSFGEGLPLSHRQARKWMKRAA---DCGHGKAQLEHGL--GLFTEGEMM 281
V+AM + ++ + LP +A K+ K AA DC G + H L GL + +
Sbjct: 913 VKAMLAAAYYMWTVEKDLP----KALKYYKMAADQQDC-DGLSSYGHFLAEGLGCNKDPV 967
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
KA A G T + V LQ + RD
Sbjct: 968 KAAECFRAAALMGSTLGMYNYAVTLQTGNGVERD 1001
Score = 37.7 bits (86), Expect = 7.2, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 19/147 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISL 159
L +G G G K+ KA + F A GSTL M + + + E +A
Sbjct: 949 LSSYGHFLAEGLGCNKDPVKAAECFRAAALMGSTLGMYNYAVTLQTGNGVERDITSAAKF 1008
Query: 160 YRQAAVLGDPAA--------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y+ AA GD A + +++ +A+ G+ R +Q L G
Sbjct: 1009 YKMAADRGDVDACIHYSQLLATGWEGNQKDLQQSANYAKKAADLGNPRGMFQYGKMLWYG 1068
Query: 206 RGVDFNLQEAARWYLR-AAEGGYVRAM 231
GV Q+ A Y++ AA GY RA+
Sbjct: 1069 TGVQKRDQQTAASYIKEAAARGYSRAI 1095
>gi|429747727|ref|ZP_19280977.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429162529|gb|EKY04844.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 815
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q AN ++ +KL + G V+AQ +LA +G+GV + QEA W + AE G + A
Sbjct: 19 QDANVKKLIKL----AEKGDVQAQTELADAYFKGKGVRRSYQEAVVWLEKVAETGDLNAQ 74
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
Y + CY G+G+P S ++ +W+ + AD G+ +AQ E L
Sbjct: 75 YQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ + QY LA C + G G+D + ++AA +Y +A Y A + CY GEG+ S +
Sbjct: 729 YAQGQYNLANCYYNGNGIDRSYEKAANYYKLSARKDYAPAQFRLGHCYYHGEGIEQSDSR 788
Query: 251 ARKWMKRAADCGHGKA 266
A W ++A D G KA
Sbjct: 789 AADWFEQACDNGEKKA 804
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+GV K+ KA++ K A G A+ G Y+ Y + ++G
Sbjct: 222 YLEGKGVEKSEAKAIEMLEKAAKGGDAEALYQLGNFYF-----------YGNSPLIGK-- 268
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV-R 229
++A+ QA+ G+ AQ QLALC + G G + + +EA W L++ +
Sbjct: 269 ----YYKKAINYYTQAANKGNAAAQAQLALCFYNGIGTNASPKEAFSWILKSVNTNPTPK 324
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM--MKAVVYL 287
A N +CY+ G G S+ QA ++ ++AA+ G AQ G L EG++ K YL
Sbjct: 325 AQNNLGVCYAVGIGAHPSNAQALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYL 384
Query: 288 E 288
E
Sbjct: 385 E 385
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EAV L + + G + AQYQLA C G+GV + Q+ W + A+ G A +L
Sbjct: 56 QEAVVWLEKVAETGDLNAQYQLAQCYFNGKGVPKSPQKGVEWLTKVADAGNPEAQRELAL 115
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G+G+ S + +++ A+ + + QL+ + G ++ KA + E A++
Sbjct: 116 CYRDGKGVEQSKEKYYALIEKHAEKENPEVQLDLAKAYHSGEGVTKDVNKAKYWAEQASK 175
Query: 293 AGETAAD 299
G + A+
Sbjct: 176 NGNSEAE 182
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL---RAAEGGYVR 229
P + ++ V+ L + + AG+ AQ +LALC G+GV+ Q ++Y + AE
Sbjct: 88 PKSPQKGVEWLTKVADAGNPEAQRELALCYRDGKGVE---QSKEKYYALIEKHAEKENPE 144
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ + Y GEG+ +A+ W ++A+ G+ +A+L
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAEL 183
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 53/141 (37%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLA-LCLHRG-----RGVDF-------------- 210
A P+NA+ A++ +A+ AG V AQY L + L G +G D+
Sbjct: 339 AHPSNAQ-ALEFFQKAAEAGDVTAQYNLGNMLLQEGQLDVKKGFDYLEKAAAANHLLALK 397
Query: 211 --------------NLQEAARWYLRAA------------------EGGYVRAMYNTSLCY 238
+ + A +Y +A+ E Y +YN S CY
Sbjct: 398 KLGDLYFNGKYTNQSFERAFEYYTKASKQTPTPQKEMLDYFYQGQEEAYADVLYNLSQCY 457
Query: 239 SFGEGLPLSHRQARKWMKRAA 259
+ G+G+ S R+A KW +AA
Sbjct: 458 AEGKGVKKSMREASKWAVKAA 478
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ 162
V L K + G GV K+++KA + + G++ A + +E++
Sbjct: 145 VQLDLAKAYHSGEGVTKDVNKAKYWAEQASKNGNSEAELLLASWTYEVN----------- 193
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
A+ P EA+K L Q + G+ AQ LA G+GV+ + +A +A
Sbjct: 194 -------ASNP----EAIKRLTQVANKGNTEAQRMLADAYLEGKGVEKSEAKAIEMLEKA 242
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPL---SHRQARKWMKRAADCGH 263
A+GG A+Y Y +G PL +++A + +AA+ G+
Sbjct: 243 AKGGDAEALYQLGNFYFYGNS-PLIGKYYKKAINYYTQAANKGN 285
>gi|384260353|ref|YP_005415537.1| TPR repeat SEL1 subfamily [Rhodospirillum photometricum DSM 122]
gi|378401451|emb|CCG06567.1| TPR repeat SEL1 subfamily [Rhodospirillum photometricum DSM 122]
Length = 262
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLY 184
+ M AG+ Y D+KE A + AA GDP AQ + N A+
Sbjct: 43 MYMAGAGVAY---DEKEGAKWI-EMAAGQGDPKAQLSIGASYAEGRGVNQNYHRALDWFR 98
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G A Y + + G G+ + +A WYL AA+ G V A + Y+ GEG+
Sbjct: 99 RAADQGEPDAHYNIGMLRSLGLGLPRDPVDAINWYLIAADRGSVLAQFRLGTLYATGEGV 158
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAA 298
+ +A +W ++AA+ GH AQ+ G GL TE +A+ +L A ++GE AA
Sbjct: 159 SQDYTKAVEWSRKAAERGHEGAQINLGRFLMQGLGTEKNFPEALHWLSSAAQSGEKAA 216
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + GRGV +N +ALD F + A +G A + G++ + + L R
Sbjct: 77 GASYAEGRGVNQNYHRALDWFRRAADQGEPDAHYNIGML------RSLGLGLPR------ 124
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP +A+ A+ G V AQ++L G GV + +A W +AAE G+
Sbjct: 125 DPV-------DAINWYLIAADRGSVLAQFRLGTLYATGEGVSQDYTKAVEWSRKAAERGH 177
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYL 287
A N G G + +A W+ AA G A G G+ + +
Sbjct: 178 EGAQINLGRFLMQGLGTEKNFPEALHWLSSAAQSGEKAAMTALGEFYSHWGDEKNIPLAV 237
Query: 288 ELATRAGETAADHVKNVILQQLSATS 313
+ RA T D IL+QL+A S
Sbjct: 238 DWLGRAA-TLGDERAQEILEQLAAQS 262
>gi|16760126|ref|NP_455743.1| hypothetical protein STY1292 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142103|ref|NP_805445.1| hypothetical protein t1669 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213428334|ref|ZP_03361084.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213650214|ref|ZP_03380267.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|378959834|ref|YP_005217320.1| hypothetical protein STBHUCCB_17740 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25512257|pir||AD0649 probable secreted protein STY1292 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502420|emb|CAD08375.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137732|gb|AAO69294.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374353706|gb|AEZ45467.1| Tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 509
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL 272
S RQA W ++AA KAQ + G+
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGV 392
>gi|421888389|ref|ZP_16319485.1| conserved exported hypothetical protein (tetratricopeptide repeats)
[Ralstonia solanacearum K60-1]
gi|378966264|emb|CCF96233.1| conserved exported hypothetical protein (tetratricopeptide repeats)
[Ralstonia solanacearum K60-1]
Length = 252
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
A D F + A RG+ LA D +M L R + P E AVK L
Sbjct: 64 AFDEFAEAAQRGNRLAQFDYAMM------------LMRGEGTVAQP-------EAAVKWL 104
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ AQ+ RG V +L EA +WY RAA GG++ A + Y G G
Sbjct: 105 RRAADNQMTHAQFVYGELFERGELVPRSLPEANKWYERAATGGHIEAQRALATNYFTGRG 164
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+P + +A W K+AA+ G G +Q
Sbjct: 165 VPRDYGRAFIWYKKAAEAGDGPSQ 188
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 70 EAAQRGNRLAQFDYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFVYGELFERGELV 129
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADH 300
P S +A KW +RAA GH +AQ FT + +A ++ + A AG+ + +
Sbjct: 130 PRSLPEANKWYERAATGGHIEAQRALATNYFTGRGVPRDYGRAFIWYKKAAEAGDGPSQY 189
Query: 301 V 301
+
Sbjct: 190 I 190
>gi|328794268|ref|XP_001120235.2| PREDICTED: protein sel-1 homolog 2-like, partial [Apis mellifera]
Length = 351
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 20/175 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV +N +KA + +L AA+G +A + G +Y+
Sbjct: 172 GILYEDGYGVDQNYEKAAEYYLAAAAQGVDIAQNNLGFLYY------------------- 212
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N E+AV+ A+ G V AQY LA + G+GV+ N ++ +Y AA+ G
Sbjct: 213 NGYGVEQNYEKAVEYYSAAAAQGDVTAQYNLANLYYYGKGVEQNYTKSIEYYQLAAQQGN 272
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+A + Y GEG+ + +A K+ K AA+ G+ AQ+ G+ L+ G+ ++
Sbjct: 273 SKAQFTLGYIYKTGEGVAQDYAEAYKYYKLAAEQGNSDAQINLGI-LYENGDGVE 326
>gi|237748099|ref|ZP_04578579.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379461|gb|EEO29552.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 313
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA+ L+ + + HG GV KN +KA ++K A G +A + GL Y + +
Sbjct: 96 EALNLVAY--MYNHGLGVSKNAEKAFMCYMKSAESGLAIAQFNVGLAYEQGNGILKNLPE 153
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ YR+AA D A+ N +EA+K +A+ G + + +
Sbjct: 154 AVKWYRKAAEQEDADAEAKMGYLTVNGIGIGKNYKEAMKWYQRAAEHGDYDSYADIGMMY 213
Query: 203 HRGRGVDFNLQEAARWYLRAAEGG--YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
RG GV NL A ++Y+ A+ G Y +A+ + Y++G+G+ QA W K+AA
Sbjct: 214 SRGDGVKRNLNHAVQYYIFGAQKGSTYSQALLGNA--YAYGKGIQKDIEQALYWYKQAAR 271
Query: 261 CGHGKAQLEHG 271
G+ A E G
Sbjct: 272 NGNVNAMKELG 282
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EA+ L Q + A +A + G GV N ++A Y+++AE G A +N L
Sbjct: 80 KEAMTFLMQPDVHDDPEALNLVAYMYNHGLGVSKNAEKAFMCYMKSAESGLAIAQFNVGL 139
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
Y G G+ + +A KW ++AA+ A+ + G
Sbjct: 140 AYEQGNGILKNLPEAVKWYRKAAEQEDADAEAKMG 174
>gi|213419506|ref|ZP_03352572.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 509
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y++GE PLS ++A +W ++AA+ G Q
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQ 126
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL 272
S RQA W ++AA KAQ + G+
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGV 392
>gi|418825129|ref|ZP_13380440.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392817454|gb|EJA73367.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
Length = 556
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 337 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 396
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 397 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 456
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 457 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 513
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 119 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 178
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 179 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 238
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 239 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 297
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 367 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 426
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 427 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 457
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 91 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 150
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 151 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 210
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 211 YRKAASPTND--AGVVRGQGSASS 232
>gi|300705571|ref|YP_003747174.1| hypothetical protein RCFBP_21421 [Ralstonia solanacearum CFBP2957]
gi|299073235|emb|CBJ44594.1| conserved exported protein of unknown function (tetratricopeptide
repeats) [Ralstonia solanacearum CFBP2957]
Length = 252
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
A D F + A RG+ LA D +M L R + P E AVK L
Sbjct: 64 AFDEFAEAAQRGNRLAQFDYAMM------------LMRGEGTVAQP-------EAAVKWL 104
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ AQ+ RG V +L EA +WY RAA GG++ A + Y G G
Sbjct: 105 RRAADNQMTHAQFVYGELFERGELVPRSLPEANKWYERAATGGHIEAQRALATNYFTGRG 164
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+P + +A W K+AA+ G G +Q
Sbjct: 165 VPRDYGRAFIWYKKAAEAGDGPSQ 188
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 70 EAAQRGNRLAQFDYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFVYGELFERGELV 129
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVVYLELATRAGETAADH 300
P S +A KW +RAA GH +AQ FT + +A ++ + A AG+ + +
Sbjct: 130 PRSLPEANKWYERAATGGHIEAQRALATNYFTGRGVPRDYGRAFIWYKKAAEAGDGPSQY 189
Query: 301 V 301
+
Sbjct: 190 I 190
>gi|72392205|ref|XP_846903.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175208|gb|AAX69354.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802933|gb|AAZ12837.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 326
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + ++A+KLL A + H A Q+ LCL G GV +L A W RAA+ GY AMY
Sbjct: 171 PGDIDDALKLLDSAIASRHAGAMLQVGLCLRDGVGVPIDLTAALTWVERAADSGYAPAMY 230
Query: 233 NTSLCYS-----FGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ Y G+ LP +A + + AA+ GH AQL G
Sbjct: 231 ELGVMYEDGVEIGGKCLPSDWGEALRLYRGAAELGHTMAQLNVG 274
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
LA L + + ++ +A + A + AM LC G G+P+ A W++R
Sbjct: 160 LAEFLLKQKNAPGDIDDALKLLDSAIASRHAGAMLQVGLCLRDGVGVPIDLTAALTWVER 219
Query: 258 AADCGHGKAQLEHGLGLFTEG 278
AAD G+ A E G+ ++ +G
Sbjct: 220 AADSGYAPAMYELGV-MYEDG 239
>gi|329850735|ref|ZP_08265580.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
gi|328841050|gb|EGF90621.1| sel1 repeat family protein [Asticcacaulis biprosthecum C19]
Length = 496
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 40/190 (21%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N ++A+K +A G +QY+L L + G GV + + AARW + AA GG+ A+Y
Sbjct: 303 PVNVDKAIKYYERAGEFGFTPSQYELGLIYYAGEGVPEDRKLAARWLMAAASGGHPDALY 362
Query: 233 NTSLCYSFGEGLPLSH------------------------------------RQARKWMK 256
Y G+ LP ARKW +
Sbjct: 363 EVGRMYDLGDTLPQDSAKALVYYKEAALKDQPAAQNALATYFYSGELLDKDLNMARKWFE 422
Query: 257 RAADCGHGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHVKNVILQQLSAT 312
AA+ G A + L EG +++ A V+L+LA +G A + + +LS
Sbjct: 423 VAANNGEPDAMFNLAVMLMNGEGGSEDLVLAFVWLKLAEMSGLEKATSLAAKVAARLSPE 482
Query: 313 SRDRAMLVVD 322
RDRA +++
Sbjct: 483 QRDRADAILN 492
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A P + +EA K +A G + A + L G V N+ +A ++Y RA E G+
Sbjct: 264 AGVPRDPKEARKWFEKAYSIGFIPAAHILGQIYQNGLEVPVNVDKAIKYYERAGEFGFTP 323
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVV 285
+ Y L Y GEG+P + A +W+ AA GH A E G LG + KA+V
Sbjct: 324 SQYELGLIYYAGEGVPEDRKLAARWLMAAASGGHPDALYEVGRMYDLGDTLPQDSAKALV 383
Query: 286 YLELATRAGETAADH 300
Y + A + AA +
Sbjct: 384 YYKEAALKDQPAAQN 398
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
A LA G GV + +EA +W+ +A G++ A + Y G +P++ +A
Sbjct: 251 NATMTLASIYLTGAGVPRDPKEARKWFEKAYSIGFIPAAHILGQIYQNGLEVPVNVDKAI 310
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEGE 279
K+ +RA + G +Q E GL ++ GE
Sbjct: 311 KYYERAGEFGFTPSQYELGL-IYYAGE 336
>gi|298160887|dbj|BAJ09392.1| hypothetical protein [Comamonas testosteroni]
Length = 445
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 215 KGVQKAQLLL--GKICFEGQGVDPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 272
Query: 152 KKEAAISLYRQAAVLGDPAA----------QPANAEEAVKLLY----QASIAGHVRAQYQ 197
++ AI+ Y QA AA P +AE A + Y +++ G+V AQY
Sbjct: 273 NEKEAIAYYTQALKYQHAAAAQRLEQLSASSPKSAEFAQSMEYMENLNSALKGNVLAQYN 332
Query: 198 LALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+ + + G+G N EAA+W+ AA GY +A YN Y GEG+ S QA KW +
Sbjct: 333 VGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLAQALKWYR 392
Query: 257 RAADCGHGKAQLEHGLGLFTEG 278
AA+ AQ G L+ +G
Sbjct: 393 LAAEQQDAPAQYALGT-LYRDG 413
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L A +G+ LA + G+ + LG AQP N EA K A+
Sbjct: 319 LNSALKGNVLAQYNVGVFQY-----------------LGKGFAQP-NYTEAAKWFTMAAN 360
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ +AQY L G GV +L +A +WY AAE A Y Y G G+ +
Sbjct: 361 QGYAKAQYNLGTLYENGEGVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNA 420
Query: 249 RQARKWMKRAADCGHGKAQ 267
+QAR+W++RAA+ GH A+
Sbjct: 421 KQAREWLQRAAEQGHAPAK 439
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G+GV KN D AL A + GL+Y E KK EA ++ Q
Sbjct: 44 GKAYLYGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLAHIHQ 103
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ +A V L +A+ G AQ L +G +
Sbjct: 104 AANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSAAAQNSLGFLYRKGELLA 163
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+LQ + RWYL AA+ V A + + Y GEG+ + +A KW+ AD G KAQL
Sbjct: 164 QDLQASFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNRAEAAKWLTPLADKGVQKAQL 222
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+V G AQP+ A K G V AQY+L G+GV+ N +A RW AA
Sbjct: 16 SVWGCAQAQPSEMVNAAK-------TGDVAAQYELGKAYLYGKGVEKNADDALRWLRLAA 68
Query: 224 EGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
E + + Y L Y G EG+ + +AA+ G+ AQ G ++ +GE ++
Sbjct: 69 EHNHAPSQYLLGLVYVLGAEGVKKDPEAGLAHIHQAANAGNLDAQNLLGT-IYLKGEAVE 127
>gi|126738261|ref|ZP_01753982.1| Sel1-like repeat protein [Roseobacter sp. SK209-2-6]
gi|126720758|gb|EBA17463.1| Sel1-like repeat protein [Roseobacter sp. SK209-2-6]
Length = 782
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +++G+GV ++ +A+ F A +G +A G MY + A++ YR+A
Sbjct: 522 GIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGRAVPQSDTQAVAWYRKA 581
Query: 164 AVLGDPAAQ------------PANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDF 210
A P Q A ++ + Y +A+ + H AQY+L + GRG
Sbjct: 582 ANHDHPRGQYNLGWMYENGRGVAENDDTARFWYNKAARSDHAAAQYRLGVMFQEGRGGTQ 641
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EAA+W RAA+ + RA Y G+G+ S QA W +RAA + A L
Sbjct: 642 NDTEAAQWLRRAADQQHARAQTYLGWMYERGKGVTQSDSQALAWYRRAAALDNPSANLN- 700
Query: 271 GLGLFTE 277
LG+F E
Sbjct: 701 -LGVFYE 706
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Query: 160 YRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
YR AA GDP AQ + EAV+ A+ G+ A+ QL +GR
Sbjct: 506 YRIAAGAGDPTAQTNLGIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGR 565
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
V + +A WY +AA + R YN Y G G+ + AR W +AA H A
Sbjct: 566 AVPQSDTQAVAWYRKAANHDHPRGQYNLGWMYENGRGVAENDDTARFWYNKAARSDHAAA 625
Query: 267 QLEHGLGLFTEG 278
Q G+ +F EG
Sbjct: 626 QYRLGV-MFQEG 636
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ AG AQ L + G+GV + EA RW+ AA GY A Y G +P
Sbjct: 509 AAGAGDPTAQTNLGIIYRNGQGVSQSDSEAVRWFRFAANQGYPVAETQLGWMYEKGRAVP 568
Query: 246 LSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
S QA W ++AA+ H + Q E+G G+ + + + A R+ AA
Sbjct: 569 QSDTQAVAWYRKAANHDHPRGQYNLGWMYENGRGVAENDDTAR--FWYNKAARSDHAAAQ 626
Query: 300 HVKNVILQQ 308
+ V+ Q+
Sbjct: 627 YRLGVMFQE 635
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 61/148 (41%), Gaps = 19/148 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++GRGV +N D A + K A A G+M+ E G
Sbjct: 597 YENGRGVAENDDTARFWYNKAARSDHAAAQYRLGVMFQE-----------------GRGG 639
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q N EA + L +A+ H RAQ L RG+GV + +A WY RAA A
Sbjct: 640 TQ--NDTEAAQWLRRAADQQHARAQTYLGWMYERGKGVTQSDSQALAWYRRAAALDNPSA 697
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRA 258
N + Y G G+ S R A + +A
Sbjct: 698 NLNLGVFYEQGRGVTQSDRLAVDYYIKA 725
>gi|255066181|ref|ZP_05318036.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
gi|255049726|gb|EET45190.1| Sel1 repeat protein [Neisseria sicca ATCC 29256]
Length = 213
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 78 LPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST 137
+P L+ L +S DA EA L G + G+GVR++ +A + K AA+G++
Sbjct: 26 VPNLKEIMLKAES-GDA-----EAQFFL--GAMYDIGQGVRQDYVQARKWYRKAAAQGNS 77
Query: 138 LAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQ 197
A + G++Y + + R A +AVK +++++ G+V Q+
Sbjct: 78 NAQNNLGMIYAQ------GYGVRRDYA-------------QAVKFYHKSAVQGNVSGQHN 118
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L + RG GV + +A RWY +AA G A YN Y G G+ S A+KW +
Sbjct: 119 LGMMYARGTGVRQDDVQAVRWYRKAAGQGSSLAQYNLGEMYFEGRGVRRSFADAQKWYSK 178
Query: 258 AADCGHGKAQLEHGLGLFTE 277
A D G + E L L E
Sbjct: 179 ACDNGDSRG-CEKNLRLIPE 197
>gi|264677901|ref|YP_003277808.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
gi|262208414|gb|ACY32512.1| sodium-type flagellar motor component [Comamonas testosteroni
CNB-2]
Length = 445
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 215 KGVQKAQLLL--GKICFEGQGVAPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 272
Query: 152 KKEAAISLYRQAAVLGDPAA----------QPANAEEAVKLLY----QASIAGHVRAQYQ 197
++ AI+ Y QA AA P +AE A + Y +++ G+V AQY
Sbjct: 273 NEKEAIAYYTQALKYQHAAAAQRLEQISASSPKSAEFAQSMEYMENLNSALKGNVLAQYN 332
Query: 198 LALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+ + + G+G N EAA+W+ AA GY +A YN Y GEG+ S QA KW +
Sbjct: 333 VGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLAQALKWYR 392
Query: 257 RAADCGHGKAQLEHGLGLFTEG 278
AA+ AQ G L+ +G
Sbjct: 393 LAAEQQDAPAQYALGT-LYRDG 413
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G+GV KN D AL A + GL+Y E KK EA ++ Q
Sbjct: 44 GKAYLYGKGVEKNADDALRWLRLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLTHIHQ 103
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ +A V L +A+ G AQ L +G +
Sbjct: 104 AANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSATAQNSLGFVYRKGELLA 163
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+LQ + RWYL AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 164 QDLQASFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQL 222
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L A +G+ LA + G+ + LG AQP N EA K A+
Sbjct: 319 LNSALKGNVLAQYNVGVFQY-----------------LGKGFAQP-NYTEAAKWFTMAAN 360
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ +AQY L G GV +L +A +WY AAE A Y Y G G+ +
Sbjct: 361 QGYAKAQYNLGTLYENGEGVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNA 420
Query: 249 RQARKWMKRAADCGHGKAQ 267
+QAR+W++RAA+ GH A+
Sbjct: 421 KQAREWLQRAAEQGHAPAK 439
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+V G AQP+ A K G+V AQY+L G+GV+ N +A RW AA
Sbjct: 16 SVWGCAQAQPSEMVNAAK-------TGNVAAQYELGKAYLYGKGVEKNADDALRWLRLAA 68
Query: 224 EGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
E + + Y L Y G EG+ + +AA+ G+ AQ G ++ +GE ++
Sbjct: 69 EHNHAPSQYLLGLVYVLGAEGVKKDPEAGLTHIHQAANAGNLDAQNLLGT-IYLKGEAVE 127
Query: 283 -----AVVYLELATRAGETAADHVKNVILQQLSATSRD 315
V +LE A + G A + + ++ ++D
Sbjct: 128 KDAATGVAWLERAAQQGSATAQNSLGFVYRKGELLAQD 165
>gi|187930788|ref|YP_001901275.1| Sel1 domain-containing protein repeat-containing protein [Ralstonia
pickettii 12J]
gi|404394816|ref|ZP_10986619.1| hypothetical protein HMPREF0989_03031 [Ralstonia sp. 5_2_56FAA]
gi|187727678|gb|ACD28843.1| Sel1 domain protein repeat-containing protein [Ralstonia pickettii
12J]
gi|348613881|gb|EGY63450.1| hypothetical protein HMPREF0989_03031 [Ralstonia sp. 5_2_56FAA]
Length = 248
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+ + A D F + A RG+ LA + +M L R + P +
Sbjct: 54 KNDFGHAFDEFAEAAQRGNRLAQFNYAMM------------LMRGEGTVARP-------D 94
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK L +A+ AQ+ RG V +L+EA +WY RAA GG+V A +
Sbjct: 95 EAVKWLRRAADNQMTHAQFAYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATD 154
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y G G+P + +A W K+AA+ G +Q
Sbjct: 155 YFTGRGVPRDYGRAFSWYKKAAEGGDAPSQ 184
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G EA +W RAA+ A + + GE +
Sbjct: 66 EAAQRGNRLAQFNYAMMLMRGEGTVARPDEAVKWLRRAADNQMTHAQFAYGELFERGELV 125
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
P S +A KW +RAA GH +AQ FT
Sbjct: 126 PRSLEEANKWYERAAAGGHVEAQRALATDYFT 157
>gi|407782908|ref|ZP_11130116.1| Putative TPR repeat protein [Oceanibaculum indicum P24]
gi|407204849|gb|EKE74829.1| Putative TPR repeat protein [Oceanibaculum indicum P24]
Length = 222
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+P +A EAV+ +A+ G AQ +LAL L GRGV + EA RWY +AAE G A
Sbjct: 60 AEP-DAAEAVRWYRKAAEQGVPEAQAKLALALQFGRGVAADPAEARRWYGKAAEQGLAGA 118
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVV 285
YN + G G P +A W ++AA G +A G GL GE + +A
Sbjct: 119 QYNLAYLLEAGLGGPRDTSRAIYWYEKAAVGGVSRALTALG-GLHARGEDGQQNLREAYK 177
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRA 326
+L LA+ AGE + + +++ R+ A WRA
Sbjct: 178 WLILASEAGEPGTADMLRQLAGEIATEDREAAESDARRWRA 218
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
EA++ + AG+ RAQ+ L L +G RG + + EA RWY +AAE G A +L
Sbjct: 29 EAMRWYEAQARAGNARAQFLLGLSYEQGLRGAEPDAAEAVRWYRKAAEQGVPEAQAKLAL 88
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 273
FG G+ +AR+W +AA+ G AQ LE GLG
Sbjct: 89 ALQFGRGVAADPAEARRWYGKAAEQGLAGAQYNLAYLLEAGLG 131
>gi|225024092|ref|ZP_03713284.1| hypothetical protein EIKCOROL_00960 [Eikenella corrodens ATCC
23834]
gi|224943117|gb|EEG24326.1| hypothetical protein EIKCOROL_00960 [Eikenella corrodens ATCC
23834]
Length = 578
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV+++ +A F K AA+G+ A ++ G++Y+ Y QA +
Sbjct: 247 GLLYMQGYGVKQDYAQARTWFEKAAAQGNADAQINLGMLYY---NGRGVNQNYTQAKIWI 303
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ AA N V QY L + + G GV+ + +A WY +AA +
Sbjct: 304 EKAAAQNN----------------VDGQYSLGVLYNNGEGVEQDYAQAHYWYEKAAAQNH 347
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A + + Y G G+P + QAR W ++AA H Q GL L+ G
Sbjct: 348 PEAQNSLGIMYYAGHGVPQDYAQARMWFEKAAAQNHADGQYYLGL-LYDNG 397
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV ++ +A F K AA+ A + G MY+E + +A I + +
Sbjct: 391 GLLYDNGHGVPQDYTQARMWFEKAAAQNHPDAQNNLGAMYYEGQGVTQNYTQARI-WFEK 449
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA P AQ P N +A +A+ G AQY L L + G GV
Sbjct: 450 AAAQNLPEAQTFLGNIYKLGQGVPQNYRQARYWYEKAAFQGFATAQYDLGLLYYEGNGVP 509
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N + W +AA G +A + Y G G+P +H QAR W +AA G AQ
Sbjct: 510 KNYTQTRIWLEKAAVQGLPQAQSDLGAIYELGLGVPKNHAQARYWYTKAAIQGDDDAQ 567
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W + E G + GRGV ++ +A K A +G A G +Y
Sbjct: 155 ARAWYEKAAAQNEPAAQNNLGLMYYEGRGVPQDYARAKTWLEKAANQGLPQAQFALGDLY 214
Query: 148 WEMDKKEAAISLYRQAAV-LGDPAAQ-PANAEEAVKLLY------------------QAS 187
+ + YRQA + G AAQ ++ + + LLY +A+
Sbjct: 215 ---ESGQGVPQSYRQAHLWYGKAAAQGNSDGQNMLGLLYMQGYGVKQDYAQARTWFEKAA 271
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G+ AQ L + + GRGV+ N +A W +AA V Y+ + Y+ GEG+
Sbjct: 272 AQGNADAQINLGMLYYNGRGVNQNYTQAKIWIEKAAAQNNVDGQYSLGVLYNNGEGVEQD 331
Query: 248 HRQARKWMKRAADCGHGKAQLEHGL 272
+ QA W ++AA H +AQ G+
Sbjct: 332 YAQAHYWYEKAAAQNHPEAQNSLGI 356
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 20/192 (10%)
Query: 88 CKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY 147
++W + A + G + +GRGV +N +A K AA+ + G++Y
Sbjct: 263 ARTWFEKAAAQGNADAQINLGMLYYNGRGVNQNYTQAKIWIEKAAAQNNVDGQYSLGVLY 322
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
+ E Y QA + AA H AQ L + + G G
Sbjct: 323 ---NNGEGVEQDYAQAHYWYEKAA----------------AQNHPEAQNSLGIMYYAGHG 363
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +A W+ +AA + Y L Y G G+P + QAR W ++AA H AQ
Sbjct: 364 VPQDYAQARMWFEKAAAQNHADGQYYLGLLYDNGHGVPQDYTQARMWFEKAAAQNHPDAQ 423
Query: 268 LEHGLGLFTEGE 279
G ++ EG+
Sbjct: 424 NNLG-AMYYEGQ 434
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV ++ +A + K AA+ A G+MY+ D +A + +
Sbjct: 319 GVLYNNGEGVEQDYAQAHYWYEKAAAQNHPEAQNSLGIMYYAGHGVPQDYAQARMWFEKA 378
Query: 163 AA--------VLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AA LG + P + +A +A+ H AQ L + G+GV
Sbjct: 379 AAQNHADGQYYLGLLYDNGHGVPQDYTQARMWFEKAAAQNHPDAQNNLGAMYYEGQGVTQ 438
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N +A W+ +AA A Y G+G+P ++RQAR W ++AA G AQ +
Sbjct: 439 NYTQARIWFEKAAAQNLPEAQTFLGNIYKLGQGVPQNYRQARYWYEKAAFQGFATAQYDL 498
Query: 271 GLGLFTEG 278
GL L+ EG
Sbjct: 499 GL-LYYEG 505
>gi|365920831|ref|ZP_09445140.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364577294|gb|EHM54575.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 418
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
A++ L EA L G ++ GRG+ +N +KA + + K AA+G+ A + G +Y
Sbjct: 139 AIQGLSEAQFNL--GVFYEKGRGIPQNYEKAREWYEKAAAQGNGFAKYNLGTLY------ 190
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
D P + +A + +A+ G AQ+ L + G GV +
Sbjct: 191 -------------ADGKGTPQDYGKAREWFEKAAAQGFSEAQHTLGVLYDNGTGVAQDYD 237
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
+A WY +AA G + YN L Y G+G+P +A W ++AA+ + AQ GL
Sbjct: 238 QAREWYEKAAAQGQAESQYNLGLFYDNGQGVPQDSTKAAAWWEKAAEQNYAAAQYSLGL- 296
Query: 274 LFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
L+ G + KA + E A GE +A + Q ++D
Sbjct: 297 LYENGRGVAQDYDKAREWYEKAAAQGEASAQFNLGNLYAQGDGIAQD 343
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+G ++ KA + F K AA+G + A G++Y D Y QA
Sbjct: 187 GTLYADGKGTPQDYGKAREWFEKAAAQGFSEAQHTLGVLY---DNGTGVAQDYDQAREWY 243
Query: 168 DPAAQPANAEEAVKL-LYQASIAG-------------------HVRAQYQLALCLHRGRG 207
+ AA AE L L+ + G + AQY L L GRG
Sbjct: 244 EKAAAQGQAESQYNLGLFYDNGQGVPQDSTKAAAWWEKAAEQNYAAAQYSLGLLYENGRG 303
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + +A WY +AA G A +N Y+ G+G+ + +AR+W ++AA G +AQ
Sbjct: 304 VAQDYDKAREWYEKAAAQGEASAQFNLGNLYAQGDGIAQDYNKARQWWEKAAIQGEARAQ 363
Query: 268 LEHGLGLFTEGE 279
G +++GE
Sbjct: 364 FNLGA-HYSKGE 374
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G+G ++++KA + F K A +G + A + G+ Y +K I
Sbjct: 118 YYKGKGTPQDINKAREWFEKAAIQGLSEAQFNLGVFY----EKGRGI------------- 160
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P N E+A + +A+ G+ A+Y L G+G + +A W+ +AA G+ A
Sbjct: 161 --PQNYEKAREWYEKAAAQGNGFAKYNLGTLYADGKGTPQDYGKAREWFEKAAAQGFSEA 218
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+ + Y G G+ + QAR+W ++AA G+A+ ++ LGLF +
Sbjct: 219 QHTLGVLYDNGTGVAQDYDQAREWYEKAA--AQGQAESQYNLGLFYD 263
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A P N +A + L +++ + AQ+ L L ++G+G ++ +A W+ +AA G A
Sbjct: 87 AMPRNDAKAREWLEKSAAQNNAAAQFNLGLLYYKGKGTPQDINKAREWFEKAAIQGLSEA 146
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVV 285
+N + Y G G+P ++ +AR+W ++AA G+G A+ G L+ +G + KA
Sbjct: 147 QFNLGVFYEKGRGIPQNYEKAREWYEKAAAQGNGFAKYNLGT-LYADGKGTPQDYGKARE 205
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRD 315
+ E A G + A H V+ + ++D
Sbjct: 206 WFEKAAAQGFSEAQHTLGVLYDNGTGVAQD 235
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
A + EA L G + +G GV ++ D+A + + K AA+G + + GL Y + +
Sbjct: 211 AAQGFSEAQHTL--GVLYDNGTGVAQDYDQAREWYEKAAAQGQAESQYNLGLFY-DNGQG 267
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ------------------ASIAGHVRAQ 195
S A A A+ ++ LLY+ A+ G AQ
Sbjct: 268 VPQDSTKAAAWWEKAAEQNYAAAQYSLGLLYENGRGVAQDYDKAREWYEKAAAQGEASAQ 327
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L +G G+ + +A +W+ +AA G RA +N YS GEG+P +AR+W
Sbjct: 328 FNLGNLYAQGDGIAQDYNKARQWWEKAAIQGEARAQFNLGAHYSKGEGVPQDFSKAREWF 387
Query: 256 KRAA 259
++AA
Sbjct: 388 EKAA 391
>gi|198244980|ref|YP_002215386.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|375118865|ref|ZP_09764032.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|421370368|ref|ZP_15820533.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421382465|ref|ZP_15832511.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421401148|ref|ZP_15851024.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421410615|ref|ZP_15860396.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412882|ref|ZP_15862636.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421416874|ref|ZP_15866593.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421869|ref|ZP_15871537.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421447995|ref|ZP_15897391.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|436601631|ref|ZP_20513054.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436797836|ref|ZP_20523282.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|437162206|ref|ZP_20695865.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437177170|ref|ZP_20703650.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437183787|ref|ZP_20707883.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437261326|ref|ZP_20718396.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437292392|ref|ZP_20731919.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437321230|ref|ZP_20738579.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437340965|ref|ZP_20744516.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437381810|ref|ZP_20750420.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437754893|ref|ZP_20834148.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|438095574|ref|ZP_20862093.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438096941|ref|ZP_20862201.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438112284|ref|ZP_20868881.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|445141428|ref|ZP_21385450.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445158254|ref|ZP_21393110.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445175032|ref|ZP_21397210.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445204005|ref|ZP_21401161.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445243157|ref|ZP_21407899.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445330108|ref|ZP_21413727.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|197939496|gb|ACH76829.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326623132|gb|EGE29477.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|395997573|gb|EJI06613.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006451|gb|EJI15414.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396021213|gb|EJI30039.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022748|gb|EJI31561.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396039970|gb|EJI48594.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396041184|gb|EJI49807.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396045051|gb|EJI53646.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396074292|gb|EJI82583.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|434960762|gb|ELL54112.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434974750|gb|ELL67080.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|435143161|gb|ELN30029.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435154850|gb|ELN41408.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435162149|gb|ELN48340.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435163782|gb|ELN49918.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435181003|gb|ELN66096.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435194394|gb|ELN78848.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435196828|gb|ELN81152.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435202875|gb|ELN86683.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435310929|gb|ELO85247.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435314012|gb|ELO87512.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435327286|gb|ELO99028.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435330362|gb|ELP01628.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|444845635|gb|ELX70828.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444851130|gb|ELX76225.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444858766|gb|ELX83742.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444862088|gb|ELX86952.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444878260|gb|ELY02382.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444890745|gb|ELY14050.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 509
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|150396795|ref|YP_001327262.1| Sel1 domain-containing protein [Sinorhizobium medicae WSM419]
gi|150028310|gb|ABR60427.1| Sel1 domain protein repeat-containing protein [Sinorhizobium
medicae WSM419]
Length = 380
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------EMDK-------- 152
G + G+GV K +A F G A + GLMY ++D+
Sbjct: 196 GSMYLQGQGVPKEPSEAFRLFRGAGGLGHENAQYNLGLMYLNGIGVQKDLDESVRWFRAA 255
Query: 153 --KEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+++A+ Y A + + N+EEA +L A+ G AQ+ L + G GV+
Sbjct: 256 AEQKSALGQYNLALMYANGTGVAKNSEEAARLTSLAAHQGLAMAQHNLGIAYISGAGVEK 315
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ A W+ +AA+ G+ RA +N ++ Y+ GEG+ + A +WM++AA+
Sbjct: 316 DSAAAVHWFQKAAQQGHARAQFNLAMMYARGEGVARNDALAFEWMQKAAN 365
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L G ++HGRGV + +A + + A G A GLMY+ K E + QAA
Sbjct: 121 LNLGVMYEHGRGVAPDPAEAARWYGRAAEHGDAQAQHRLGLMYF---KGEGVKRDHVQAA 177
Query: 165 VL-------GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
G+P+AQ P EA +L A GH AQY L L
Sbjct: 178 RWYRAAAAQGNPSAQFHLGSMYLQGQGVPKEPSEAFRLFRGAGGLGHENAQYNLGLMYLN 237
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G GV +L E+ RW+ AAE YN +L Y+ G G+ + +A + AA G
Sbjct: 238 GIGVQKDLDESVRWFRAAAEQKSALGQYNLALMYANGTGVAKNSEEAARLTSLAAHQGLA 297
Query: 265 KAQLEHGLGL 274
AQ H LG+
Sbjct: 298 MAQ--HNLGI 305
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L + GRGV + EAARWY RAAE G +A + L Y GEG+ H QA +W +
Sbjct: 123 LGVMYEHGRGVAPDPAEAARWYGRAAEHGDAQAQHRLGLMYFKGEGVKRDHVQAARWYRA 182
Query: 258 AADCGHGKAQLEHGLGLFTEGE 279
AA G+ AQ G ++ +G+
Sbjct: 183 AAAQGNPSAQFHLG-SMYLQGQ 203
>gi|429743994|ref|ZP_19277518.1| Sel1 repeat protein [Neisseria sp. oral taxon 020 str. F0370]
gi|429164032|gb|EKY06198.1| Sel1 repeat protein [Neisseria sp. oral taxon 020 str. F0370]
Length = 591
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 60/247 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G+GV+++ +A+ + K AA+G A+ + Y+ +DK E I + Q
Sbjct: 254 GTIYAQGKGVKQDWKQAVQWYEKAAAQGHVRALGALSIRYFSGEGVDKDEKRGIDMLTQV 313
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRA---------------- 194
A GD AQ + EEAVK L +A+ G+ RA
Sbjct: 314 AERGDTLAQTVLGGRYLTGSGVKQDKEEAVKWLTRAAEKGNARAARLLSTTYRDGFVVEK 373
Query: 195 --------------------QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
QY LAL +G+GV ++ +A +WY +AAE G A YN
Sbjct: 374 DDGKAVYWLEKAAQLGQAQAQYDLALRYRQGKGVPKDMAQAVKWYRKAAEQGRADAQYNL 433
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-EHGLG-LFTEGEMM-----KAVVYL 287
++ Y G+G+ QA +W+++AA + L +H LG ++ G ++ +A +L
Sbjct: 434 AVAYRAGDGVAKDDAQAVEWLRKAAAQETSFSVLAQHELGFMYLRGSILPKDAKQAAYWL 493
Query: 288 ELATRAG 294
+ A+R G
Sbjct: 494 DKASRHG 500
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 95/232 (40%), Gaps = 61/232 (26%)
Query: 94 ALRPLREA-----MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
AL PL EA LL GK + GRGV K+ KAL K A GS M + G+MY+
Sbjct: 56 ALLPLAEAGDAEAQALL--GKAYYLGRGVEKDEQKALFWDKKAAENGSLRGMNNLGVMYY 113
Query: 149 E----------------------------------------MDKKEAAISL-YRQAAVLG 167
E + + EA +L YR+AA G
Sbjct: 114 EGRGGLAKDLAEGTKWIRRAAEKGYAVSQRNIGLAYEEGKGVARDEAQAALWYRKAAEQG 173
Query: 168 DPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
D +Q A + ++A +A+ G+ AQ L GRGV N E
Sbjct: 174 DALSQSALGTLYFDGRGVAQDDKQAFAWYEKAAKQGNAAAQNNLGFMYGAGRGVAQNPAE 233
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ +WY +AA A YN Y+ G+G+ +QA +W ++AA GH +A
Sbjct: 234 SLKWYKKAAAQNDATAQYNIGTIYAQGKGVKQDWKQAVQWYEKAAAQGHVRA 285
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 59/239 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G ++ G+GV ++ +A + K A +G L+ G +Y++ D K+A + Y +
Sbjct: 146 GLAYEEGKGVARDEAQAALWYRKAAEQGDALSQSALGTLYFDGRGVAQDDKQA-FAWYEK 204
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AAQ N E++K +A+ AQY + +G+GV
Sbjct: 205 AAKQGNAAAQNNLGFMYGAGRGVAQNPAESLKWYKKAAAQNDATAQYNIGTIYAQGKGVK 264
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR-------------------- 249
+ ++A +WY +AA G+VRA+ S+ Y GEG+ +
Sbjct: 265 QDWKQAVQWYEKAAAQGHVRALGALSIRYFSGEGVDKDEKRGIDMLTQVAERGDTLAQTV 324
Query: 250 ----------------QARKWMKRAADCGHGKA----QLEHGLGLFTEGEMMKAVVYLE 288
+A KW+ RAA+ G+ +A + G E + KAV +LE
Sbjct: 325 LGGRYLTGSGVKQDKEEAVKWLTRAAEKGNARAARLLSTTYRDGFVVEKDDGKAVYWLE 383
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E AVK L + AG AQ L + GRGV+ + Q+A W +AAE G +R M N +
Sbjct: 51 EAAVKALLPLAEAGDAEAQALLGKAYYLGRGVEKDEQKALFWDKKAAENGSLRGMNNLGV 110
Query: 237 CYSFGE-GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y G GL + KW++RAA+ G+ +Q GL + EG+
Sbjct: 111 MYYEGRGGLAKDLAEGTKWIRRAAEKGYAVSQRNIGLA-YEEGK 153
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDP 169
R++ G+GV K++ +A+ + K A +G A + + Y D V D
Sbjct: 400 RYRQGKGVPKDMAQAVKWYRKAAEQGRADAQYNLAVAYRAGD------------GVAKDD 447
Query: 170 AAQPANAEEAVKLLYQAS---IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
A +AV+ L +A+ + V AQ++L RG + + ++AA W +A+ G
Sbjct: 448 A-------QAVEWLRKAAAQETSFSVLAQHELGFMYLRGSILPKDAKQAAYWLDKASRHG 500
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFT-EGEMM 281
YVRA + GEG+ +A + ++ AA+ G ++L GL G T ++
Sbjct: 501 YVRAKKKLAAMSVAGEGVEKDDAKAAELLRDAAEAGDADSRLILGLAYKNGFLTLPKDLQ 560
Query: 282 KAVVYLELATRAGETAAD-HVKNV 304
+A +L A+ G + AD ++K++
Sbjct: 561 QAEYWLRKASEQGRSEADPYLKDI 584
>gi|213163323|ref|ZP_03349033.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 481
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL 272
S RQA W ++AA KAQ + G+
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGV 392
>gi|445220263|ref|ZP_21402909.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444870697|gb|ELX95182.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
Length = 512
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|300692968|ref|YP_003753963.1| hypothetical protein RPSI07_3355 [Ralstonia solanacearum PSI07]
gi|299080028|emb|CBJ52702.1| conserved exported protein of unknown function (tetratricopeptide
repeats) [Ralstonia solanacearum PSI07]
gi|344168553|emb|CCA80845.1| conserved exported hypothetical protein (tetratricopeptide repeats)
[blood disease bacterium R229]
Length = 237
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEE 178
+A D F + A RG+ LA + +M L R + P E
Sbjct: 44 NEFGRAFDEFAEAAQRGNRLAQFNYAMM------------LMRGEGTVAQP-------EA 84
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AVK L +A+ AQ+ RG V +L EA +WY RAA GG++ A + Y
Sbjct: 85 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAANGGHIEAQRALATNY 144
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G G+P + +A W ++AA+ G G +Q
Sbjct: 145 FTGRGVPRDYGRAFTWYRKAAEAGDGPSQ 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 55 EAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELFERGELV 114
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
P S +A KW +RAA+ GH +AQ FT
Sbjct: 115 PRSLPEANKWYERAANGGHIEAQRALATNYFT 146
>gi|213612595|ref|ZP_03370421.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 482
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL 272
S RQA W ++AA KAQ + G+
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGV 392
>gi|418532479|ref|ZP_13098382.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
gi|371450338|gb|EHN63387.1| sodium-type flagellar motor component [Comamonas testosteroni ATCC
11996]
Length = 437
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 207 KGVQKAQLLL--GKICFEGQGVDPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 264
Query: 152 KKEAAISLYRQAAVLGDPAA----------QPANAEEAVKLLY----QASIAGHVRAQYQ 197
++ AI+ Y QA AA P +AE A + Y +++ G+V AQY
Sbjct: 265 NEKEAIAYYTQALKYQHAAAAQRLEQLSASSPKSAEFAQSMEYMENLNSALKGNVLAQYN 324
Query: 198 LALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+ + + G+G N EAA+W+ AA GY +A YN Y GEG+ S QA KW +
Sbjct: 325 VGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLVQALKWYR 384
Query: 257 RAADCGHGKAQLEHGLGLFTEGEMMK 282
AA+ AQ G L+ +G +K
Sbjct: 385 LAAEQQDAPAQYALGT-LYRDGLGVK 409
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G GV KN D A+ A + GL+Y E KK EA ++ Q
Sbjct: 36 GKAYLYGNGVEKNADDAMRWLRLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLAYIHQ 95
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ +A V L +A+ G AQ L +G V
Sbjct: 96 AANAGNLDAQNLLGTIYLKGEAVEKDAARGVAWLERAAQRGSAAAQNGLGFVYRKGELVA 155
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ Q + RWYL+AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 156 QDQQASFRWYLKAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLAPLADKGVQKAQL 214
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L A +G+ LA + G+ + LG AQP N EA K A+
Sbjct: 311 LNSALKGNVLAQYNVGVFQY-----------------LGKGFAQP-NYTEAAKWFTMAAN 352
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ +AQY L G GV +L +A +WY AAE A Y Y G G+ +
Sbjct: 353 QGYAKAQYNLGTLYENGEGVGKSLVQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNA 412
Query: 249 RQARKWMKRAADCGHGKAQ 267
+QAR+W++RAA+ G+ A+
Sbjct: 413 KQAREWLQRAAEQGYAPAK 431
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+V G AQP+ A K G V AQY+L G GV+ N +A RW AA
Sbjct: 8 SVWGCAQAQPSETVNAAK-------TGDVGAQYELGKAYLYGNGVEKNADDAMRWLRLAA 60
Query: 224 EGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM- 281
E + + Y L Y G EG+ ++ +AA+ G+ AQ G ++ +GE +
Sbjct: 61 EHNHAPSQYLLGLVYVLGAEGVKKDPEAGLAYIHQAANAGNLDAQNLLGT-IYLKGEAVE 119
Query: 282 ----KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+ V +LE A + G AA + + ++ ++D+
Sbjct: 120 KDAARGVAWLERAAQRGSAAAQNGLGFVYRKGELVAQDQ 158
>gi|344173174|emb|CCA88313.1| conserved exported hypothetical protein (tetratricopeptide repeats)
[Ralstonia syzygii R24]
Length = 237
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEE 178
+A D F + A RG+ LA + +M L R + P E
Sbjct: 44 NEFGRAFDEFAEAAQRGNRLAQFNYAMM------------LMRGEGTVAQP-------EA 84
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
AVK L +A+ AQ+ RG V +L EA +WY RAA GG++ A + Y
Sbjct: 85 AVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAANGGHIEAQRALATNY 144
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G G+P + +A W ++AA+ G G +Q
Sbjct: 145 FTGRGVPRDYGRAFTWYRKAAEAGDGPSQ 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 55 EAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELFERGELV 114
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
P S +A KW +RAA+ GH +AQ FT
Sbjct: 115 PRSLPEANKWYERAANGGHIEAQRALATNYFT 146
>gi|62180323|ref|YP_216740.1| hypothetical protein SC1753 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224583751|ref|YP_002637549.1| hypothetical protein SPC_1972 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|375114651|ref|ZP_09759821.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62127956|gb|AAX65659.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224468278|gb|ACN46108.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714797|gb|EFZ06368.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 509
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 101/275 (36%), Gaps = 41/275 (14%)
Query: 57 EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG 116
+G DF+ +F L + +A W L ++ G + +G G
Sbjct: 84 QGSDFSYFILGYHYNYGENFPLSRQKALE-----WYRKAAELGDSSTQEILGDAYMYGDG 138
Query: 117 VRKNLDKALDSFLK--------GAARG---STLAMVDAGLMYWE-----MDKKEAAISLY 160
+N AL+ + K G RG ++ A G+MY D ++ AI +
Sbjct: 139 FPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMR 198
Query: 161 RQAAVLGDPA------------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ A + DPA P + +AV L + + L +
Sbjct: 199 KAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPA 258
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
D + WY + A+ + YN + Y G L H A +W +RAA G +AQ
Sbjct: 259 D--RVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQD 316
Query: 269 EHGLGLFTEGE-----MMKAVVYLELATRAGETAA 298
G+ +F +GE +A+ + A R G AA
Sbjct: 317 AIGV-MFMQGEGVSQDYQQALAWYRKAARQGLPAA 350
>gi|386815597|ref|ZP_10102815.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
gi|386420173|gb|EIJ34008.1| Sel1 domain protein repeat-containing protein [Thiothrix nivea DSM
5205]
Length = 443
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 182 LLYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
++ Q++ AG +AQ L G G+ +L+EAA WY +AA GY +A YN L Y
Sbjct: 312 VVKQSAEAGDKQAQLMLGTMYEDGVGGLPSDLREAAYWYEQAARQGYPKAQYNLGLLYED 371
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
G G+ H+QA W +AA G G+AQ G+ LF G+
Sbjct: 372 GRGVKQDHKQAAYWYDKAARAGFGEAQNNLGV-LFVLGK 409
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N ++++ L A+ AG AQY+LA+ L + +++++ W RAA GG A Y
Sbjct: 100 NPQDSLSALQSAAQAGDASAQYRLAMQLRGSDNPNADIKKSLDWQQRAAVGGNAEAQYGL 159
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ Y+ G+ +P + AR W ++AA GH A+L
Sbjct: 160 GVLYANGQYVPADNNLARNWFQKAAQQGHVAAKL 193
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 150 MDKKEAAISLYRQAAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQ 195
MD ++ +Q+A GD AQ P++ EA QA+ G+ +AQ
Sbjct: 303 MDLTGIEPAVVKQSAEAGDKQAQLMLGTMYEDGVGGLPSDLREAAYWYEQAARQGYPKAQ 362
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y L L GRGV + ++AA WY +AA G+ A N + + G+G+ + ++A +
Sbjct: 363 YNLGLLYEDGRGVKQDHKQAAYWYDKAARAGFGEAQNNLGVLFVLGKGVNKNPKRAEQLF 422
Query: 256 KRAADCGHGKA 266
AA G+ A
Sbjct: 423 TEAARSGNADA 433
>gi|344925535|ref|ZP_08778996.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 170
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+LY++ G AQ + +EA K + A+ GH ++Q L L G GV + +EA +
Sbjct: 3 TLYKE----GKEVAQ--DYKEAAKWMRMAAEQGHTQSQCYLGLFYDEGLGVPQDYKEAFK 56
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
WY AA+ G A + Y G G+P + +A KW AA+ H +AQ G+ L+ +
Sbjct: 57 WYKMAADQGNADAKFYLGFLYDDGLGVPQDYTEAMKWYLLAAEQNHAQAQYNIGV-LYND 115
Query: 278 G-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSR 314
G + +AV + LA G A +++++ + +SR
Sbjct: 116 GRGVEKDYKEAVKWFRLAAEQGHVDAQQNLKLLMEEGNHSSR 157
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K G+ V ++ +A A +G T + GL Y
Sbjct: 2 GTLYKEGKEVAQDYKEAAKWMRMAAEQGHTQSQCYLGLFY-------------------D 42
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P + +EA K A+ G+ A++ L G GV + EA +WYL AAE +
Sbjct: 43 EGLGVPQDYKEAFKWYKMAADQGNADAKFYLGFLYDDGLGVPQDYTEAMKWYLLAAEQNH 102
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A YN + Y+ G G+ +++A KW + AA+ GH AQ
Sbjct: 103 AQAQYNIGVLYNDGRGVEKDYKEAVKWFRLAAEQGHVDAQ 142
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G+ V + +EAA+W AAE G+ ++ L Y G G+P +++A KW K AAD G+
Sbjct: 7 EGKEVAQDYKEAAKWMRMAAEQGHTQSQCYLGLFYDEGLGVPQDYKEAFKWYKMAADQGN 66
Query: 264 GKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
A+ G GL + +A+ + LA A + V+ +D
Sbjct: 67 ADAKFYLGFLYDDGLGVPQDYTEAMKWYLLAAEQNHAQAQYNIGVLYNDGRGVEKD 122
>gi|168335469|ref|ZP_02693556.1| Sel1 domain protein repeat-containing protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 359
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N++ A++ + A+ GHV +QYQL G+ V ++ A WYL+AA+ Y A
Sbjct: 185 PKNSKMALEWIKAAATQGHVESQYQLGNLYKEGKDVPLDVTIAFEWYLKAAKQHYYNAEM 244
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGL 274
+ + CY+ G G+ + ++A +W +A D G A L+ HG G+
Sbjct: 245 DLAECYTLGIGVEKNPKKAFEWYMKATDHNLGNAFLKVSHCYTHGAGV 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E K YQ +I G+ AQY L+ C G G N + A W AA G+V + Y
Sbjct: 154 EQFKWSYQGAIRGNADAQYNLSRCYWLGWGTPKNSKMALEWIKAAATQGHVESQYQLGNL 213
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELAT 291
Y G+ +PL A +W +AA + A+++ + LG+ E KA + AT
Sbjct: 214 YKEGKDVPLDVTIAFEWYLKAAKQHYYNAEMDLAECYTLGIGVEKNPKKAFEWYMKAT 271
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
L L + +F E +W + A G A YN S CY G G P + + A +W+K AA
Sbjct: 140 LALMKKAKREFKNSEQFKWSYQGAIRGNADAQYNLSRCYWLGWGTPKNSKMALEWIKAAA 199
Query: 260 DCGHGKAQLEHGLGLFTEGE 279
GH ++Q + G L+ EG+
Sbjct: 200 TQGHVESQYQLG-NLYKEGK 218
>gi|194445007|ref|YP_002041009.1| hypothetical protein SNSL254_A1890 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418809293|ref|ZP_13364845.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813448|ref|ZP_13368969.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817760|ref|ZP_13373244.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418820670|ref|ZP_13376102.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833612|ref|ZP_13388535.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836829|ref|ZP_13391713.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840396|ref|ZP_13395225.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418850433|ref|ZP_13405149.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418854179|ref|ZP_13408858.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418866940|ref|ZP_13421401.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|194403670|gb|ACF63892.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|392773378|gb|EJA30074.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392774674|gb|EJA31369.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392787299|gb|EJA43841.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392792230|gb|EJA48694.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392795446|gb|EJA51818.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392801190|gb|EJA57420.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392810886|gb|EJA66898.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392818283|gb|EJA74167.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392824972|gb|EJA80730.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392840052|gb|EJA95590.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 509
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|320352813|ref|YP_004194152.1| Sel1 domain-containing protein repeat-containing protein
[Desulfobulbus propionicus DSM 2032]
gi|320121315|gb|ADW16861.1| Sel1 domain protein repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 374
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 161 RQAAVLGDPAAQPA---NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
QA VL D A++ A AE+ +K+L + G+ A L L +RG+GVD + +A
Sbjct: 121 NQAVVLLDAASKQAKGMTAEQKLKVLSGLAAKGNADAMNGLGLLYYRGQGVDKDYAKAFE 180
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
W+ +AA+ G+V AM+ C+ G G QA KW A + GHG + G+
Sbjct: 181 WFSKAAQQGHVEAMFGMGSCFYQGHGAGRDPVQALKWFSLAGEKGHGDSARNAGV 235
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 33/262 (12%)
Query: 61 FASLPFD---VLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGV 117
FA+ P + V++K AS P + W +A+VLL + G
Sbjct: 83 FAATPDEDLAVVDKQGASGDAPAESGTATHSAEWQ---LQQNQAVVLLDAASKQAKGMTA 139
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+ L K L AA+G+ AM GL+Y YR V D A
Sbjct: 140 EQKL-KVLSGL---AAKGNADAMNGLGLLY------------YRGQGVDKDYA------- 176
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A + +A+ GHV A + + C ++G G + +A +W+ A E G+ + N +
Sbjct: 177 KAFEWFSKAAQQGHVEAMFGMGSCFYQGHGAGRDPVQALKWFSLAGEKGHGDSARNAGVM 236
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG----EMMKAVVYLELATRA 293
+ G+G +QAR W ++ A G+ +A + +G T E +LE A
Sbjct: 237 WDKGQGAARDEQQARTWYRKGALLGNVEAMVNLAVGYLTGNGGAQEDRLGREWLECAAER 296
Query: 294 GETAADHVKNVILQQLSATSRD 315
G AA + V+L + ++D
Sbjct: 297 GNRAAAYNLGVLLAEGRGVAKD 318
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 17/176 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG----------------LMYWEMD 151
G + G+GV K+ KA + F K A +G AM G L ++ +
Sbjct: 162 GLLYYRGQGVDKDYAKAFEWFSKAAQQGHVEAMFGMGSCFYQGHGAGRDPVQALKWFSLA 221
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDF 210
++ R A V+ D A E+ + Y + ++ G+V A LA+ G G
Sbjct: 222 GEKGHGDSARNAGVMWDKGQGAARDEQQARTWYRKGALLGNVEAMVNLAVGYLTGNGGAQ 281
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ W AAE G A YN + + G G+ AR+W A GH +A
Sbjct: 282 EDRLGREWLECAAERGNRAAAYNLGVLLAEGRGVAKDVDAARQWWAVAGRDGHQQA 337
>gi|418845155|ref|ZP_13399941.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418858817|ref|ZP_13413428.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863324|ref|ZP_13417862.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392813964|gb|EJA69928.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392831685|gb|EJA87314.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392833192|gb|EJA88807.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
Length = 509
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGAVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y++GE PLS ++A +W ++AA+ G Q
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQ 126
>gi|417373025|ref|ZP_12143157.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353603633|gb|EHC58668.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L G+ V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|417365455|ref|ZP_12138065.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353594374|gb|EHC51907.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|78189891|ref|YP_380229.1| Sel1 repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78172090|gb|ABB29186.1| Sel1-like repeat [Chlorobium chlorochromatii CaD3]
Length = 425
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--- 147
W L +A+ G + +G GV+++ AL F AA+G+ +A + G+MY
Sbjct: 107 WFRLLATQGDAIAQFNLGVMYYNGEGVKQDYTDALKWFQLSAAQGNAMAQNNLGVMYAKG 166
Query: 148 --WEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHV 192
+ D EA + +R +A G+ AQ + EA+K ++ G
Sbjct: 167 EGVQQDYAEA-LKWHRLSAAQGNAMAQNNLGAMYYKGEGVEQDYVEALKWYRLSAAQGDA 225
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ+ L L + G+GV + EA +WY +A +A YN L Y GEG+ + +A
Sbjct: 226 VAQWILGLMYYEGQGVRQDYGEAIKWYRLSAAQEDAKAQYNLGLMYYNGEGVKQDYAEAL 285
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEGE 279
KW + +A G+ AQ G ++ +GE
Sbjct: 286 KWHRLSAAQGNAMAQNNLG-AMYAKGE 311
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L G + HG GV+++ +A+ + AA+G A + G+MY Y
Sbjct: 49 LNLGYAYDHGEGVKQDYAEAIKWYRLSAAQGDVKAQFNLGVMY------------YNGEG 96
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V D A EA+K + G AQ+ L + + G GV + +A +W+ +A
Sbjct: 97 VKQDYA-------EAIKWFRLLATQGDAIAQFNLGVMYYNGEGVKQDYTDALKWFQLSAA 149
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEM 280
G A N + Y+ GEG+ + +A KW + +A G+ AQ G G E +
Sbjct: 150 QGNAMAQNNLGVMYAKGEGVQQDYAEALKWHRLSAAQGNAMAQNNLGAMYYKGEGVEQDY 209
Query: 281 MKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
++A+ + L+ G+ A + ++ + +D
Sbjct: 210 VEALKWYRLSAAQGDAVAQWILGLMYYEGQGVRQD 244
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ G+ AQ L G GV + EA +WY +A G V+A +N + Y GEG+
Sbjct: 38 QAAAQGNSEAQLNLGYAYDHGEGVKQDYAEAIKWYRLSAAQGDVKAQFNLGVMYYNGEGV 97
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAAD 299
+ +A KW + A G AQ G+ ++ GE +K A+ + +L+ G A
Sbjct: 98 KQDYAEAIKWFRLLATQGDAIAQFNLGV-MYYNGEGVKQDYTDALKWFQLSAAQGNAMAQ 156
Query: 300 HVKNVILQQLSATSRDRA 317
+ V+ + +D A
Sbjct: 157 NNLGVMYAKGEGVQQDYA 174
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW--EMDKKEAAISL--YRQA 163
G + G+GVR++ +A+ + AA+ A + GLMY+ E K++ A +L +R +
Sbjct: 232 GLMYYEGQGVRQDYGEAIKWYRLSAAQEDAKAQYNLGLMYYNGEGVKQDYAEALKWHRLS 291
Query: 164 AVLGDPAAQP------ANAE-------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ A E EA+K ++ G AQ L L G GV
Sbjct: 292 AAQGNAMAQNNLGAMYAKGEGVQQDYAEALKWHRLSAAQGDATAQGILGLMYCEGYGVRQ 351
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N EA +WY +A G A YN L Y G G+ S A++W +A D G
Sbjct: 352 NYGEALKWYRLSAAQGNAGAQYNLGLMYYNGTGVRQSKAIAKEWFGKACDNG 403
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA 155
AM G + G GV ++ +AL + AA+G +A GLMY+E D EA
Sbjct: 189 AMAQNNLGAMYYKGEGVEQDYVEALKWYRLSAAQGDAVAQWILGLMYYEGQGVRQDYGEA 248
Query: 156 AISLYRQAAVLGDPAAQPA------NAE-------EAVKLLYQASIAGHVRAQYQLALCL 202
I YR +A D AQ N E EA+K ++ G+ AQ L
Sbjct: 249 -IKWYRLSAAQEDAKAQYNLGLMYYNGEGVKQDYAEALKWHRLSAAQGNAMAQNNLGAMY 307
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G GV + EA +W+ +A G A L Y G G+ ++ +A KW + +A G
Sbjct: 308 AKGEGVQQDYAEALKWHRLSAAQGDATAQGILGLMYCEGYGVRQNYGEALKWYRLSAAQG 367
Query: 263 HGKAQLEHGLGLFT 276
+ AQ GL +
Sbjct: 368 NAGAQYNLGLMYYN 381
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + +G GV+++ +AL AA+G+ +A + G MY + D EA + +R
Sbjct: 268 GLMYYNGEGVKQDYAEALKWHRLSAAQGNAMAQNNLGAMYAKGEGVQQDYAEA-LKWHRL 326
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A GD AQ N EA+K ++ G+ AQY L L + G GV
Sbjct: 327 SAAQGDATAQGILGLMYCEGYGVRQNYGEALKWYRLSAAQGNAGAQYNLGLMYYNGTGVR 386
Query: 210 FNLQEAARWYLRAAEGGY 227
+ A W+ +A + G+
Sbjct: 387 QSKAIAKEWFGKACDNGF 404
>gi|406880963|gb|EKD29153.1| hypothetical protein ACD_79C00038G0003 [uncultured bacterium]
Length = 420
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
+ G R+ G GV K+L K+ K A +G A + G +Y+ + E
Sbjct: 49 FKLGNRYYDGDGVEKDLSKSFQWTKKAAEQGFKSAQYNLGRLYYNGEGTE---------- 98
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
N EE++K +ASI G A ++L G+G + + +A W+ ++AE
Sbjct: 99 ---------RNYEESLKWFEKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKSAE 149
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----E 279
G+ A L Y G G+ +++ +W++++A G+ A G+ ++ EG
Sbjct: 150 KGFDLAQEQLGLLYVKGIGVEQDYQKGYEWLEKSAIQGNSNACFYIGM-MYVEGAGVKRN 208
Query: 280 MMKAVVYLELATRAGETAADH 300
+ +A+ Y+E+A A +
Sbjct: 209 ITEALKYIEIAANKNHPEAQY 229
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 23/233 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
G+ + +G G +N +++L F K + +GS AM + G MY K AI ++++
Sbjct: 88 GRLYYNGEGTERNYEESLKWFEKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKS 147
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + ++ + L +++I G+ A + + + G GV
Sbjct: 148 AEKGFDLAQEQLGLLYVKGIGVEQDYQKGYEWLEKSAIQGNSNACFYIGMMYVEGAGVKR 207
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N+ EA ++ AA + A Y Y GEG+ + +A KW+ +A + G+ A++
Sbjct: 208 NITEALKYIEIAANKNHPEAQYKLGSFYFKGEGVTQNFTEAFKWLTKAVENGNDYAKVPL 267
Query: 271 GLGLFTEG-----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
+ ++ +G ++ K + +L A H+ V+L + + D +
Sbjct: 268 AI-MYYKGDGVTKDIQKGLELCKLVADKNIPYAQHIYAVMLLSMLPLNIDECL 319
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAIS 158
+ G+ + G+G K+ +KA++ F K A +G LA GL+Y E D ++
Sbjct: 120 MFELGRMYSIGQGTNKDKNKAIEWFKKSAEKGFDLAQEQLGLLYVKGIGVEQDYQKGYEW 179
Query: 159 LYRQAAVLGDP-------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L ++A+ G+ A N EA+K + A+ H AQY+L +G
Sbjct: 180 L-EKSAIQGNSNACFYIGMMYVEGAGVKRNITEALKYIEIAANKNHPEAQYKLGSFYFKG 238
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
GV N EA +W +A E G A ++ Y G+G+ ++ + K AD
Sbjct: 239 EGVTQNFTEAFKWLTKAVENGNDYAKVPLAIMYYKGDGVTKDIQKGLELCKLVAD 293
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ EE +KL S G AQ++L + G GV+ +L ++ +W +AAE G+ A YN
Sbjct: 32 DIEEIIKL----SEEGSAEAQFKLGNRYYDGDGVEKDLSKSFQWTKKAAEQGFKSAQYNL 87
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELA 290
Y GEG ++ ++ KW ++A+ G G A E G +G T + KA+ + + +
Sbjct: 88 GRLYYNGEGTERNYEESLKWFEKASIQGSGWAMFELGRMYSIGQGTNKDKNKAIEWFKKS 147
Query: 291 TRAG 294
G
Sbjct: 148 AEKG 151
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 26/151 (17%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV +N +A K G+ A V +MY++ D I
Sbjct: 232 GSFYFKGEGVTQNFTEAFKWLTKAVENGNDYAKVPLAIMYYKGDGVTKDIQ--------- 282
Query: 168 DPAAQPANAEEAVKLLYQASI--AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
E KL+ +I A H+ A L++ + N+ E +WY++AA
Sbjct: 283 -------KGLELCKLVADKNIPYAQHIYAVMLLSM-------LPLNIDECLKWYIKAANQ 328
Query: 226 GYVRAMYNTSLCYSFGE-GLPLSHRQARKWM 255
Y + Y + Y +G+ G+ +A KW+
Sbjct: 329 YYTESQYALAELYFYGKNGVKKDIVEAYKWI 359
>gi|410634930|ref|ZP_11345555.1| hypothetical protein GLIP_0105 [Glaciecola lipolytica E3]
gi|410145504|dbj|GAC12760.1| hypothetical protein GLIP_0105 [Glaciecola lipolytica E3]
Length = 773
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 108 GKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL----YRQ 162
G + +G+ G++++ +A+ + K AA+G++ AM + GL++ D + + S YR+
Sbjct: 586 GYNYAYGKEGLKQSYAQAVYWYQKAAAQGNSGAMNNLGLLHSRGDGVKQSYSEAAKWYRK 645
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A+ LGD A P + EA KL ++ H A L HRG GV
Sbjct: 646 ASDLGDAIAANNLGSLYRDGEGVPQSHAEANKLFRKSIDLKHYGAYVNLGFQYHRGNGVT 705
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ EA ++Y AAE G N + Y G G+ S +A KW + AA G AQ
Sbjct: 706 KSYTEAVKYYRIAAEQGEKYGQLNLGVMYENGHGVTKSESEAIKWYRLAAKQGVESAQ 763
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+AV +A+ G+ A L L RG GV + EAA+WY +A++ G A N
Sbjct: 602 QAVYWYQKAAAQGNSGAMNNLGLLHSRGDGVKQSYSEAAKWYRKASDLGDAIAANNLGSL 661
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y GEG+P SH +A K +++ D H A + G G +AV Y +A
Sbjct: 662 YRDGEGVPQSHAEANKLFRKSIDLKHYGAYVNLGFQYHRGNGVTKSYTEAVKYYRIAAEQ 721
Query: 294 GE 295
GE
Sbjct: 722 GE 723
>gi|417539008|ref|ZP_12191421.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353665346|gb|EHD03501.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGCQGVPKDNKQAYIWYYMAS 452
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L G+ V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y++GE PLS ++A +W ++AA+ G Q
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQ 126
>gi|207856733|ref|YP_002243384.1| hypothetical protein SEN1279 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206708536|emb|CAR32857.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 491
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 218
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 288 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 347
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 348 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 378
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 12 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 71
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 72 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 131
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 132 YRKAASPTND--AGVVRGQGSASS 153
>gi|197249692|ref|YP_002146271.1| hypothetical protein SeAg_B1381 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|440762949|ref|ZP_20941998.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768112|ref|ZP_20947086.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440774562|ref|ZP_20953449.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|197213395|gb|ACH50792.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436412785|gb|ELP10723.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436418617|gb|ELP16500.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436421699|gb|ELP19543.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|167553939|ref|ZP_02347682.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205321748|gb|EDZ09587.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|395223463|ref|ZP_10403264.1| Sel1 domain-containing protein [Pontibacter sp. BAB1700]
gi|394452707|gb|EJF07925.1| Sel1 domain-containing protein [Pontibacter sp. BAB1700]
Length = 346
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA++ ++A+ G A Q+ G GVD N ++ +W+L+AAE G AM+ +
Sbjct: 4 EAMQYYFKAAEMGISNAMLQIGRLYSEGLGVDQNAKQGFKWFLKAAENGNSDAMFIVGIW 63
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
YS G G+ + +W +RAA+ G+G A G+ G T +A+ + LA+
Sbjct: 64 YSRGIGIETDTSEGLRWFRRAAEKGNGSAMANLGIAYLMGRGTAVNYNEALKWSLLASNN 123
Query: 294 GETAADHVKNVILQQLSATSRD 315
GE A H V+ RD
Sbjct: 124 GEVGAYHNLGVLYANGLGVDRD 145
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
+L+ G+ + G GV +N + FLK A G++ AM G+ Y R
Sbjct: 21 MLQIGRLYSEGLGVDQNAKQGFKWFLKAAENGNSDAMFIVGIWY------------SRGI 68
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+ D + E ++ +A+ G+ A L + GRG N EA +W L A+
Sbjct: 69 GIETDTS-------EGLRWFRRAAEKGNGSAMANLGIAYLMGRGTAVNYNEALKWSLLAS 121
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF-------T 276
G V A +N + Y+ G G+ + +A +W ++AA G + + G ++ T
Sbjct: 122 NNGEVGAYHNLGVLYANGLGVDRDYTKAIEWYEKAAAEGFADSMINLG-NIYSRGGPGVT 180
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 312
E + + YLE A + A ++ ++ ++ L +
Sbjct: 181 EDQSVAMNWYLEAAEQGKAVAMHNIASMYVKGLGVS 216
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G GV ++ KA++ + K AA G +M++ G +Y + + A++ Y +
Sbjct: 133 GVLYANGLGVDRDYTKAIEWYEKAAAEGFADSMINLGNIYSRGGPGVTEDQSVAMNWYLE 192
Query: 163 AAVLGDPAAQPANAEEAVKLL------------YQASIA-GHVRAQYQLALCLHRGRGVD 209
AA G A A VK L Y+ S A G ++ + + G+
Sbjct: 193 AAEQGKAVAMHNIASMYVKGLGVSVDYCEGLTWYKKSAALGEDKSMHAVGYIYSDGKAGR 252
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N ++A W+L+AAE G +M N + + G G+ ++ A +W ++AA+ G+ K L
Sbjct: 253 RNYKKARNWFLQAAEKGNADSMVNMGVLHVEGNGVKKNYIVALEWFQKAAEMGNIKGML 311
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV ++ A++ +L+ A +G +AM + MY + +D E ++ Y+++A LG+
Sbjct: 176 GPGVTEDQSVAMNWYLEAAEQGKAVAMHNIASMYVKGLGVSVDYCEG-LTWYKKSAALGE 234
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
+ A N ++A QA+ G+ + + + G GV N A
Sbjct: 235 DKSMHAVGYIYSDGKAGRRNYKKARNWFLQAAEKGNADSMVNMGVLHVEGNGVKKNYIVA 294
Query: 216 ARWYLRAAEGGYVRAM-YNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
W+ +AAE G ++ M Y +L G+G+ A +W ++A +
Sbjct: 295 LEWFQKAAEMGNIKGMLYLANLYEKGGKGVRKDKDLADQWRQKAENL 341
>gi|200390424|ref|ZP_03217035.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|199602869|gb|EDZ01415.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|72536288|gb|AAZ73202.1| hypothetical protein [Escherichia coli]
Length = 281
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 81/204 (39%), Gaps = 25/204 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV KN KA+ +L A + LA MY D
Sbjct: 2 YRDGKGVNKNPQKAISLYLNAANKNHPLAQHSLACMY-------------------RDGE 42
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ E+A K +++ G+ AQY LA GRGVD + Q+ W +A+ Y +A
Sbjct: 43 GVEVDDEQAFKWCQKSAEQGYAEAQYHLATMYIDGRGVDVDYQQVVYWLNLSADQKYSKA 102
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAV 284
Y G +P A +K AAD G A L HG + ++ +A+
Sbjct: 103 ECTLGYMYYKGTEIPQDMTMAINLLKSAADHGDIDAALVLGQLYVHGREGYLPKDIHQAI 162
Query: 285 VYLELATRAGETAADHVKNVILQQ 308
YL A GE + + +I Q
Sbjct: 163 AYLNQAQEGGEEQSAEILGMIYYQ 186
>gi|221067763|ref|ZP_03543868.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
gi|220712786|gb|EED68154.1| Sel1 domain protein repeat-containing protein [Comamonas
testosteroni KF-1]
Length = 445
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK + +G+GV KN D AL A + + GL+Y E KK EA ++ Q
Sbjct: 44 GKAYLYGKGVEKNADDALRWLRLAADQQHAPSQYLLGLVYVLGAEGVKKDPEAGLARIHQ 103
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ NA V L +A+ G AQ L +G +
Sbjct: 104 AANAGNLDAQNLLGTIYLRGEAVERNAATGVAWLERAAQQGSATAQNSLGFVYRKGELLA 163
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+LQ + RWYL AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 164 QDLQVSFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQL 222
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 215 KGVQKAQLLL--GKICFEGQGVAPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 272
Query: 152 KKEAAISLYRQAAVLGDPAA-------QPANAEE---AVKLLY----QASIAGHVRAQYQ 197
+ AI+ Y QA AA A+AE A + Y +++ G+V AQY
Sbjct: 273 NDKEAIAYYTQALKYQHAAAAERLQQLSAASAEAGSFAQSMEYMENLNSALRGNVLAQYN 332
Query: 198 LALCLHRGRGVDF-NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+ + + G+G D N EAA+W+ AAE GY +A YN Y G+G+ S QA KW +
Sbjct: 333 VGVFQYLGKGFDKPNYAEAAKWFAMAAEQGYAKAQYNLGTLYENGDGVDRSLAQALKWYR 392
Query: 257 RAADCGHGKAQLEHGLGLFTEGEMMK 282
AA+ AQ G L+ +G+ +K
Sbjct: 393 LAAEQQDAPAQYALGT-LYRDGQGVK 417
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L A RG+ LA + G+ + LG +P N EA K A+
Sbjct: 319 LNSALRGNVLAQYNVGVFQY-----------------LGKGFDKP-NYAEAAKWFAMAAE 360
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ +AQY L G GVD +L +A +WY AAE A Y Y G+G+ +
Sbjct: 361 QGYAKAQYNLGTLYENGDGVDRSLAQALKWYRLAAEQQDAPAQYALGTLYRDGQGVKKNA 420
Query: 249 RQARKWMKRAADCGHGKAQ 267
R AR+W++RAA GH A+
Sbjct: 421 RLAREWLQRAAAQGHAPAK 439
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G AQP++A A K G V AQY+L G+GV+ N +A RW AA+
Sbjct: 19 GCAQAQPSDAVNAAK-------TGDVAAQYELGKAYLYGKGVEKNADDALRWLRLAADQQ 71
Query: 227 YVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK--- 282
+ + Y L Y G EG+ + +AA+ G+ AQ G ++ GE ++
Sbjct: 72 HAPSQYLLGLVYVLGAEGVKKDPEAGLARIHQAANAGNLDAQNLLGT-IYLRGEAVERNA 130
Query: 283 --AVVYLELATRAGETAADHVKNVILQQLSATSRD 315
V +LE A + G A + + ++ ++D
Sbjct: 131 ATGVAWLERAAQQGSATAQNSLGFVYRKGELLAQD 165
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA-MYNTSLCYSFGEGLPLSHRQ 250
V AQ+ +A + G GV+ N EAA+W A+ G +A + +C+ G+G+ +++
Sbjct: 182 VLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQLLLGKICFE-GQGVAPDYKR 240
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGEM-----MKAVVYLELATRAGETAADHVKNVI 305
A + A G G+A E G LF +GE +A+ Y A + AA
Sbjct: 241 AVLLLHAVAIRGSGEAYYELGR-LFEQGEGEYRNDKEAIAYYTQALKYQHAAAAER---- 295
Query: 306 LQQLSATSRD 315
LQQLSA S +
Sbjct: 296 LQQLSAASAE 305
>gi|398381650|ref|ZP_10539758.1| TPR repeat-containing protein [Rhizobium sp. AP16]
gi|397719182|gb|EJK79755.1| TPR repeat-containing protein [Rhizobium sp. AP16]
Length = 409
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ LA + +G GV + ++AA WY +AAEGG AM+ +L G +P +
Sbjct: 160 GDPAAQTLLAELMSQGLGVKRDTKDAAFWYGKAAEGGDATAMFKYALVLIEGRDVPRDRK 219
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAG 294
+A +WM++AAD G A+ G L E +K A+ Y E A G
Sbjct: 220 KADEWMRKAADAGQASAEFNLGQLLTAENPGLKGLQMALPYYEKAAEQG 268
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
DA Y + + A ++++ A VL + P + ++A + + +A+ AG A++ L
Sbjct: 184 DAAFWYGKAAEGGDATAMFKYALVLIEGRDVPRDRKKADEWMRKAADAGQASAEFNLGQL 243
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR-QARKWMKRAAD 260
L LQ A +Y +AAE G A Y S Y LP + +AR+W+ RAA+
Sbjct: 244 LTAENPGLKGLQMALPYYEKAAEQGIADAQYAISQLYLNMPDLPPEKKARAREWLSRAAN 303
Query: 261 CGHGKAQLEHGLGLFT 276
G AQL+ G+ L
Sbjct: 304 AGFDTAQLDMGVWLIN 319
>gi|222087032|ref|YP_002545567.1| enhanced entry protein [Agrobacterium radiobacter K84]
gi|221724480|gb|ACM27636.1| enhanced entry protein [Agrobacterium radiobacter K84]
Length = 409
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ LA + +G GV + ++AA WY +AAEGG AM+ +L G +P +
Sbjct: 160 GDPAAQTLLAELMSQGLGVKRDTKDAAFWYGKAAEGGDATAMFKYALVLIEGRDVPRDRK 219
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAG 294
+A +WM++AAD G A+ G L E +K A+ Y E A G
Sbjct: 220 KADEWMRKAADAGQASAEFNLGQLLTAENPGLKGLQMALPYYEKAAEQG 268
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
DA Y + + A ++++ A VL + P + ++A + + +A+ AG A++ L
Sbjct: 184 DAAFWYGKAAEGGDATAMFKYALVLIEGRDVPRDRKKADEWMRKAADAGQASAEFNLGQL 243
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR-QARKWMKRAAD 260
L LQ A +Y +AAE G A Y S Y LP + +AR+W+ RAA+
Sbjct: 244 LTAENPGLKGLQMALPYYEKAAEQGIADAQYAISQLYLNMPDLPPEKKARAREWLSRAAN 303
Query: 261 CGHGKAQLEHGLGLFT 276
G AQL+ G+ L
Sbjct: 304 AGFDTAQLDMGVWLVN 319
>gi|213857328|ref|ZP_03384299.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 431
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 198 AKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 257
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 258 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 317
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 318 MGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 374
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 153 KEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-- 193
++ A+ YR+AA LGD + Q P N + A++ +A+ AG VR
Sbjct: 29 RQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQ 88
Query: 194 -----AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +
Sbjct: 89 GSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDY 148
Query: 249 RQARKWMK 256
RQA W+
Sbjct: 149 RQAVYWLN 156
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 228 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 287
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL 272
S RQA W ++AA KAQ + G+
Sbjct: 288 QSDRQAIAWYRKAAKQDFAKAQYQLGV 314
>gi|378955266|ref|YP_005212753.1| hypothetical protein SPUL_1571 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357205877|gb|AET53923.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD +AQ P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSAQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G AQ G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSAQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|254503648|ref|ZP_05115799.1| Sel1 repeat family [Labrenzia alexandrii DFL-11]
gi|222439719|gb|EEE46398.1| Sel1 repeat family [Labrenzia alexandrii DFL-11]
Length = 1338
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
A+ E A +A+ G AQY+LA +GRGV +L +A WY ++AE G +AM+N
Sbjct: 1087 ADLERAAAWYQKAADKGLAPAQYRLASLYEKGRGVQKDLPKAKAWYTQSAEAGNAKAMHN 1146
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ ++ G G + A KW + AA+ G + G+ G+ + +++ + + +
Sbjct: 1147 LAVFFAEGGGGQPDYASAAKWFEDAANYGVKDSLFNLGILYAGGIGVDKDLIASYKWFAI 1206
Query: 290 ATRAGETAA----DHVKNVILQQLSATSR 314
A G+ A D V N++ Q+ A++R
Sbjct: 1207 AADQGDPEAAKRRDDVANMMDQETLASAR 1235
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
++ + + G GV +L+ AA WY +AA+ G A Y + Y G G+ +A+ W
Sbjct: 1072 EFLIGVKYTEGDGVAADLERAAAWYQKAADKGLAPAQYRLASLYEKGRGVQKDLPKAKAW 1131
Query: 255 MKRAADCGHGKAQLEHGLGLF 275
++A+ G+ KA H L +F
Sbjct: 1132 YTQSAEAGNAKAM--HNLAVF 1150
>gi|384084304|ref|ZP_09995479.1| TPR repeat protein, SEL1 subfamily [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 509
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G+GV KN A FLK A +G+ LA D G +Y++ + K A A + Y +A
Sbjct: 95 GTAYYQGQGVPKNYATANAWFLKAAQQGNALAETDMGNVYYQGQGVPKNYATADAWYLKA 154
Query: 164 AV---------LGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A +GD AQ P N A +A+ G+ A+ L ++G GV
Sbjct: 155 AQQGYALAETDMGDDYAQGQGVPKNYATADAWYLKAAQQGYALAEGSLGTAYYQGHGVPK 214
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N A W+L+AA+ G A Y G+G+P ++ A W +AA G+ A+ +
Sbjct: 215 NQATANAWFLKAAQQGNALAENIIGDAYYKGQGVPKNYATADTWFLKAAQQGNALAETDM 274
Query: 271 GLGLFTEGE-----MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
G G + +G+ + A + A + G+ A+ + +Q ++ A D+W
Sbjct: 275 G-GAYYKGQGVSKNYVTADAWFLKAAQQGDALAETAMGLAYEQGRGVPKNYA--TADAW 330
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + G+GV KN A +LK A +G LA G Y++ + K +A A + + +A
Sbjct: 167 GDDYAQGQGVPKNYATADAWYLKAAQQGYALAEGSLGTAYYQGHGVPKNQATANAWFLKA 226
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ A+ P N A +A+ G+ A+ + ++G+GV
Sbjct: 227 AQQGNALAENIIGDAYYKGQGVPKNYATADTWFLKAAQQGNALAETDMGGAYYKGQGVSK 286
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N A W+L+AA+ G A L Y G G+P ++ A W +AA G A+
Sbjct: 287 NYVTADAWFLKAAQQGDALAETAMGLAYEQGRGVPKNYATADAWFLKAAQQGDALAETFM 346
Query: 271 G 271
G
Sbjct: 347 G 347
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GV KN A FLK A +G+ LA D G Y+ K +S
Sbjct: 239 GDAYYKGQGVPKNYATADTWFLKAAQQGNALAETDMGGAYY----KGQGVS--------- 285
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
N A +A+ G A+ + L +GRGV N A W+L+AA+ G
Sbjct: 286 ------KNYVTADAWFLKAAQQGDALAETAMGLAYEQGRGVPKNYATADAWFLKAAQQG- 338
Query: 228 VRAMYNTSLCYSF--GEGLPLSHRQARKWMKRAADCGHGKAQ 267
A+ T + Y++ G+G+P + A W +A G A+
Sbjct: 339 -DALAETFMGYAYDQGQGVPKNQATADAWFLKADQQGKASAK 379
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 17/174 (9%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-- 172
+G NL K + A +G +A G Y+ AA + +AA G+ A+
Sbjct: 38 KGDTSNLKK----LEQAAVKGDVIAQTWLGGYYYGKKSYRAADVWFLKAAQQGNINAEQS 93
Query: 173 -----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
P N A +A+ G+ A+ + ++G+GV N A WYL+
Sbjct: 94 IGTAYYQGQGVPKNYATANAWFLKAAQQGNALAETDMGNVYYQGQGVPKNYATADAWYLK 153
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
AA+ GY A + Y+ G+G+P ++ A W +AA G+ A+ G +
Sbjct: 154 AAQQGYALAETDMGDDYAQGQGVPKNYATADAWYLKAAQQGYALAEGSLGTAYY 207
>gi|397661938|ref|YP_006502638.1| putative Sel1 repeat protein [Taylorella equigenitalis ATCC 35865]
gi|394350117|gb|AFN36031.1| putative Sel1 repeat protein [Taylorella equigenitalis ATCC 35865]
Length = 341
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAA 156
+A G + G GV +N A+ + K AA+G A+ + G MY + +DK
Sbjct: 93 DAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMMGYGVDK---- 148
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
N +A++L +A+ A + L +G GV+ +L++
Sbjct: 149 ------------------NYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTN 190
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y +AA + A YN + Y FG+G+ ++A +W K+AA+ H AQ
Sbjct: 191 ELYEKAANKNHTEAQYNLGIHYQFGKGVTKDDKKAMEWYKKAAEADHYLAQ 241
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 18/173 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQAAVLGDP 169
G GV KN KA++ + K A++ T A G MY W ++ E LY +AA
Sbjct: 143 GYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHT 202
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ + ++A++ +A+ A H AQ LA +G GV+ + A
Sbjct: 203 EAQYNLGIHYQFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEKGEGVEHDYDLAM 262
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
WY +AA+ A N L Y +G+G + + A W A D H KA E
Sbjct: 263 EWYKKAAKHNDPVAQNNLGLLYEYGKGTSKNWKNAIMWYTLACD-NHEKAGCE 314
>gi|299530229|ref|ZP_07043655.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
gi|298721886|gb|EFI62817.1| sodium-type flagellar motor component [Comamonas testosteroni S44]
Length = 418
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 96 RPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMD 151
+ +++A +LL GK G+GV + +A+ A RGS A + G ++ E
Sbjct: 188 KGVQKAQLLL--GKICFEGQGVAPDYKRAVLLLHAVAIRGSGEAYYELGRLFEQGEGEYR 245
Query: 152 KKEAAISLYRQAAVLGDPAA----------QPANAEEAVKLLY----QASIAGHVRAQYQ 197
++ AI+ Y QA AA P +AE A + Y +++ G+V AQY
Sbjct: 246 NEKEAIAYYTQALKYQHAAAAQRLEQLSASSPKSAEFAQSMEYMENLNSALKGNVLAQYN 305
Query: 198 LALCLHRGRG-VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+ + + G+G N EAA+W+ AA GY +A YN Y GEG+ S QA KW +
Sbjct: 306 VGVFQYLGKGFAQPNYTEAAKWFTMAANQGYAKAQYNLGTLYENGEGVGKSLAQALKWYR 365
Query: 257 RAADCGHGKAQLEHGLGLFTEG 278
AA+ AQ G L+ +G
Sbjct: 366 LAAEQQDAPAQYALGT-LYRDG 386
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 129 LKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASI 188
L A +G+ LA + G+ + LG AQP N EA K A+
Sbjct: 292 LNSALKGNVLAQYNVGVFQY-----------------LGKGFAQP-NYTEAAKWFTMAAN 333
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ +AQY L G GV +L +A +WY AAE A Y Y G G+ +
Sbjct: 334 QGYAKAQYNLGTLYENGEGVGKSLAQALKWYRLAAEQQDAPAQYALGTLYRDGLGVKKNA 393
Query: 249 RQARKWMKRAADCGHGKAQ 267
+QAR+W++RAA+ GH A+
Sbjct: 394 KQAREWLQRAAEQGHAPAK 412
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKK--EAAISLYRQ 162
GK +G+GV KN D AL A + GL+Y E KK EA ++ Q
Sbjct: 17 GKAHLYGKGVEKNADDALRWLHLAAEHNHAPSQYLLGLVYVLGAEGVKKDPEAGLTHIHQ 76
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ AQ +A V L +A+ G AQ L +G +
Sbjct: 77 AANAGNLDAQNLLGTIYLKGEAVEKDAATGVAWLERAAQQGSATAQNSLGFVYRKGELLA 136
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+LQ + RWYL AA+ V A + + Y GEG+ +H +A KW+ AD G KAQL
Sbjct: 137 QDLQASFRWYLMAAQQADVLAQFTVAEMYYLGEGVEKNHAEAAKWLTPLADKGVQKAQL 195
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 244
A+ G V AQY+L G+GV+ N +A RW AAE + + Y L Y G EG+
Sbjct: 4 AAKTGDVAAQYELGKAHLYGKGVEKNADDALRWLHLAAEHNHAPSQYLLGLVYVLGAEGV 63
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAAD 299
+ +AA+ G+ AQ G ++ +GE ++ V +LE A + G A
Sbjct: 64 KKDPEAGLTHIHQAANAGNLDAQNLLGT-IYLKGEAVEKDAATGVAWLERAAQQGSATAQ 122
Query: 300 HVKNVILQQLSATSRD 315
+ + ++ ++D
Sbjct: 123 NSLGFVYRKGELLAQD 138
>gi|357405672|ref|YP_004917596.1| beta-lactamase [Methylomicrobium alcaliphilum 20Z]
gi|351718337|emb|CCE24006.1| putative Beta-lactamase [Methylomicrobium alcaliphilum 20Z]
Length = 385
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 33/242 (13%)
Query: 46 RFSCSRSIKSTEGHDFASL-P-FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMV 103
RF+C + G++ SL P F + ++ F+ Q L + + A PL
Sbjct: 66 RFNCDATATVINGNESESLRPLFSMRQQLKQDFSTFQ----ELADQDYGKAYFPL----- 116
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
+ + G+G+ +N +KA + +++ A T A W MD E
Sbjct: 117 ----ARMYLGGQGIPRNAEKA-EYYMRMAFNWCTSHQALADPEIW-MDLAE--------- 161
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
+ G+ N +++ +A+ AG AQY L L + G GV + +A WY +AA
Sbjct: 162 -MYGNGFGIEQNPVQSLSWCRKAAEAGLAGAQYNLGLKIEYGLGVKQDAIQAVFWYRKAA 220
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTE 277
+ GY A N L Y G G+ + QA W +RAA+ G+ AQ+ E G+G+ +
Sbjct: 221 DQGYAGAQCNLGLNYECGYGVEQNTVQAAFWYRRAAEQGYAYAQIELGALYEFGVGVARD 280
Query: 278 GE 279
GE
Sbjct: 281 GE 282
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-MYW 148
+W + + L + + + + + +G G+ +N ++L K A G A + GL + +
Sbjct: 142 NWCTSHQALADPEIWMDLAEMYGNGFGIEQNPVQSLSWCRKAAEAGLAGAQYNLGLKIEY 201
Query: 149 EMDKKEAAIS---LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHV 192
+ K+ AI YR+AA G AQ N +A +A+ G+
Sbjct: 202 GLGVKQDAIQAVFWYRKAADQGYAGAQCNLGLNYECGYGVEQNTVQAAFWYRRAAEQGYA 261
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
AQ +L G GV + ++AA WY +AAE G+ A Y G G+ + +A
Sbjct: 262 YAQIELGALYEFGVGVARDGEQAAFWYRKAAEQGHPYAQDFLGELYWAGFGVAQDYEKAV 321
Query: 253 KWMKRAADCGHGKAQ 267
W ++AAD G +AQ
Sbjct: 322 FWYRQAADQGAPRAQ 336
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + ++G GV+++ +A+ + K A +G A + GL Y E + +AA YR+
Sbjct: 196 GLKIEYGLGVKQDAIQAVFWYRKAADQGYAGAQCNLGLNYECGYGVEQNTVQAAF-WYRR 254
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + E+A +A+ GH AQ L G GV
Sbjct: 255 AAEQGYAYAQIELGALYEFGVGVARDGEQAAFWYRKAAEQGHPYAQDFLGELYWAGFGVA 314
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ ++A WY +AA+ G RA Y G + +QA W ++ A GH K Q
Sbjct: 315 QDYEKAVFWYRQAADQGAPRAQDMLHRVYPNGPAVETVDQQALYWYRKIAGRGHVKTQ 372
>gi|46446344|ref|YP_007709.1| hypothetical protein pc0710 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399985|emb|CAF23434.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 379
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G + HGRGV ++ K+ + + A +G+ A G MY E
Sbjct: 187 RLGDLYVHGRGVSQSYQKSFEYYQLAAKQGNASAQCKLGAMYAEG--------------- 231
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
LG P + +EAV+ A+ H AQY L + GRGV + Q+A + AA
Sbjct: 232 LGVPQSD----QEAVEYFQLAANQNHAAAQYCLGVFYAHGRGVTQSDQKALEYCQLAANQ 287
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM---- 281
G A Y+ L Y+ G +P S ++A K+ + AA+ H AQ GL ++ G+ +
Sbjct: 288 GIATAQYSLGLMYAHGHCVPQSDQEAVKYYQLAANQNHTIAQRNLGL-MYKNGQGVAQSD 346
Query: 282 -KAVVYLELATRAGETAADH 300
+AV Y +LA G+ A H
Sbjct: 347 QEAVKYFQLAANQGDLTAQH 366
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + HGRGV ++ KAL+ A +G A GLMY
Sbjct: 261 GVFYAHGRGVTQSDQKALEYCQLAANQGIATAQYSLGLMY-------------------A 301
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + +EAVK A+ H AQ L L G+GV + QEA +++ AA G
Sbjct: 302 HGHCVPQSDQEAVKYYQLAANQNHTIAQRNLGLMYKNGQGVAQSDQEAVKYFQLAANQGD 361
Query: 228 VRAMYNTSLCYSFGEGLP 245
+ A +N + G+ +
Sbjct: 362 LTAQHNLEVMNENGQNIT 379
>gi|75674382|ref|YP_316803.1| Sel1 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
gi|74419252|gb|ABA03451.1| sel1-like repeat protein [Nitrobacter winogradskyi Nb-255]
Length = 1059
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 158 SLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
+ R AA+ GDPAA N +EA K +A+ AG V A ++L +
Sbjct: 828 TTLRSAALQGDPAASFEVGVRYAEGKGVTVNYDEAAKWYERAAHAGIVPAMFRLGALHEK 887
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G G ++ A R+YL+AA+ G +AM+N ++ + G G + A +W +AA+ G
Sbjct: 888 GLGTSKDVDTARRYYLQAADRGNAKAMHNLAVLDADGGGKGADYVSAAQWFSKAAERGIA 947
Query: 265 KAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLV 320
+Q G+ G+ E + K+ + LA G+ + ++ + ++L S A L
Sbjct: 948 DSQYNLGILYARGIGVEQNLAKSYKWFSLAAAQGDVDSGRKRDEVAKRLDPPSLAAAKLA 1007
Query: 321 VDSWRAMP 328
V ++ P
Sbjct: 1008 VQTFVVTP 1015
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+ G+GV N D+A + + A G AM G ++ E + +
Sbjct: 846 GVRYAEGKGVTVNYDEAAKWYERAAHAGIVPAMFRLGALH------EKGLGTSK------ 893
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + A + QA+ G+ +A + LA+ G G + AA+W+ +AAE G
Sbjct: 894 -------DVDTARRYYLQAADRGNAKAMHNLAVLDADGGGKGADYVSAAQWFSKAAERGI 946
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ YN + Y+ G G+ + ++ KW AA G
Sbjct: 947 ADSQYNLGILYARGIGVEQNLAKSYKWFSLAAAQG 981
>gi|319938296|ref|ZP_08012693.1| hypothetical protein HMPREF9488_03529 [Coprobacillus sp. 29_1]
gi|319806589|gb|EFW03247.1| hypothetical protein HMPREF9488_03529 [Coprobacillus sp. 29_1]
Length = 1150
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G G+ K+++KA + +L+ A G AM+ G + E + A+ R++A G
Sbjct: 347 YEMGIGIEKDIEKAKEYYLRSAEMGYPRAMMSYGKLI-EDENMSLAMDYLRRSAETGYVY 405
Query: 171 AQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
A N E A + +A+ A L G G + NL++A
Sbjct: 406 AMCKYSYYLENGIGCDKNEELAFEYCQKAADLNDSGALCTLGYYYENGIGCEKNLEKAIA 465
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LG 273
+Y ++++ G +R M N CY G G + ++A + ++A+D G+ AQ G +G
Sbjct: 466 YYQQSSDAGSLRGMTNLGYCYEAGIGTAVDEKKAVEIYQQASDLGYDIAQCNLGYCYEVG 525
Query: 274 LFTEGEMMKAVVYLELATR 292
+ E ++ +A Y ELAT+
Sbjct: 526 IGVEQDLQQAKRYYELATQ 544
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ +GRG ++ A + K A ++ G M MDK E A++ Y+ AA
Sbjct: 131 YMNGRGRVQDEYMAYQLYEKAAKMNHAKSICSLGYMNEIGLGTPMDK-EKAVAYYQMAAD 189
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
L D A + E+A + +A+ RA + + C GRGVD +
Sbjct: 190 LDDEIASCNYAFCLYEGIGCEVDDEKAFEYFEKAAAKDMPRALFYVGECYCFGRGVDKDE 249
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ Y +AA+ G+ +A Y+ CY +G G+ + +A W + AA+ G AQL+ L
Sbjct: 250 IKGMTHYKKAADLGFTQAKYSVGYCYEYGIGVQEDYHEAATWYQEAANEGLESAQLQ--L 307
Query: 273 GLFTEG 278
G F E
Sbjct: 308 GYFYEA 313
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGA----ARG----STLAMVDAG--------LMYWEMD 151
G ++ GRGV ++ KA++ + K +RG +TL G L Y+ +
Sbjct: 951 GNMYEFGRGVSQDYQKAIEYYSKAVDQDYSRGYYALATLYKSGLGVEKDTPLALKYYTIA 1010
Query: 152 KKEAAISLYRQAAVLGDPAA--QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+ +S AVL D A Q + +A++ +A GH A L +C GV
Sbjct: 1011 ADKGHVSAMYNLAVLYDFEAEEQYRDMTKAIQYYQEAVDKGHYGAMNNLGVCYKEEDGVP 1070
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ ++A + + +AA+GG A N + Y++G+G + QA+ W ++A +
Sbjct: 1071 LDFEKAFQLFKKAADGGDYHAFMNLARAYTYGQGTKIDLEQAQVWCQKAVE 1121
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L ++ L G +++G G KNL+KA+ + + + GS M + G Y EA I
Sbjct: 437 LNDSGALCTLGYYYENGIGCEKNLEKAIAYYQQSSDAGSLRGMTNLGYCY------EAGI 490
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ ++AV++ QAS G+ AQ L C G GV+ +LQ+A R
Sbjct: 491 -------------GTAVDEKKAVEIYQQASDLGYDIAQCNLGYCYEVGIGVEQDLQQAKR 537
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGH--GKAQL----EH 270
+Y A + +R M N + Y G +G P + +A++ ++AA + G A L E
Sbjct: 538 YYELATQQNNLRGMCNLAYLYEKGIDGAP-DYVKAKELYEQAAAYNYPRGYASLGFLYED 596
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAA 298
GLG+ + ++ KA + A+ G+ A
Sbjct: 597 GLGV--DKDLNKAFECYQKASELGDPMA 622
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW---EMDKKE-AAISLYRQAAVLGDP 169
G G + +KA + F K AA+ A+ G Y +DK E ++ Y++AA LG
Sbjct: 206 GIGCEVDDEKAFEYFEKAAAKDMPRALFYVGECYCFGRGVDKDEIKGMTHYKKAADLGFT 265
Query: 170 AAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
A+ + + EA +A+ G AQ QL G GV+ + Q A
Sbjct: 266 QAKYSVGYCYEYGIGVQEDYHEAATWYQEAANEGLESAQLQLGYFYEAGEGVEQDPQLAV 325
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
WY +A+ Y A + CY G G+ +A+++ R+A+ G+ +A + +G L
Sbjct: 326 YWYQQASHQNYAPAHCYLAYCYEMGIGIEKDIEKAKEYYLRSAEMGYPRAMMSYG-KLIE 384
Query: 277 EGEMMKAVVYLELATRAGETAA 298
+ M A+ YL + G A
Sbjct: 385 DENMSLAMDYLRRSAETGYVYA 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEA 179
N KA++ + + AA T A+ + GL Y E E N ++A
Sbjct: 747 NFAKAVELYEEAAAMNYTRALCNLGLYYEEGTGVEQ-------------------NDKKA 787
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
V+ Y+A+ G AQ L C G G++ N+Q+A +Y +++ Y RA+ N L Y
Sbjct: 788 VEYYYKAAELGDEVAQCNLGYCYEMGIGLEVNMQKAFEYYQISSQSHYPRAVSNLGLFYE 847
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRA 293
G+ P+ ++A + + AAD + AQ E G+G T+ ++ KA + A +
Sbjct: 848 LGKAGPIDEQKAFECYQIAADSQYPPAQCNLACCYEDGIG--TDIDLQKAFELYKAAAQR 905
Query: 294 GET 296
T
Sbjct: 906 NST 908
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-------------EMDKKE 154
G ++ G GV ++L +A + + + M + +Y E+ ++
Sbjct: 519 GYCYEVGIGVEQDLQQAKRYYELATQQNNLRGMCNLAYLYEKGIDGAPDYVKAKELYEQA 578
Query: 155 AAISLYRQAAVLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AA + R A LG D + +A + +AS G A L G G +
Sbjct: 579 AAYNYPRGYASLGFLYEDGLGVDKDLNKAFECYQKASELGDPMAMCTLGYYYENGIGCER 638
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
NL++A +Y R+A+GG +R M N CY G G + ++A + +RAA+ G+ AQ
Sbjct: 639 NLEKAFEYYQRSAQGGNLRGMTNLGYCYEAGIGTSVDLQKAVEVYQRAAELGYDVAQCNL 698
Query: 271 G----LGLFTEGEMMKAVVYLELATR 292
G + + E ++ A Y ELA +
Sbjct: 699 GYCYEMAIGVEKDLQLAKKYYELAAQ 724
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 59/236 (25%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L + M + G +++G G +NL+KA + + + A G+ M + G Y EA I
Sbjct: 617 LGDPMAMCTLGYYYENGIGCERNLEKAFEYYQRSAQGGNLRGMTNLGYCY------EAGI 670
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ ++AV++ +A+ G+ AQ L C GV+ +LQ A +
Sbjct: 671 -------------GTSVDLQKAVEVYQRAAELGYDVAQCNLGYCYEMAIGVEKDLQLAKK 717
Query: 218 WYLRAAEG------------------------------------GYVRAMYNTSLCYSFG 241
+Y AA+ Y RA+ N L Y G
Sbjct: 718 YYELAAQQRNPRALCNLANLYEIGVDGESNFAKAVELYEEAAAMNYTRALCNLGLYYEEG 777
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRA 293
G+ + ++A ++ +AA+ G AQ G +G+ E M KA Y ++++++
Sbjct: 778 TGVEQNDKKAVEYYYKAAELGDEVAQCNLGYCYEMGIGLEVNMQKAFEYYQISSQS 833
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAIS 158
L G ++ G GV +N KA++ + K A G +A + G Y EM + A
Sbjct: 767 LCNLGLYYEEGTGVEQNDKKAVEYYYKAAELGDEVAQCNLGYCY-EMGIGLEVNMQKAFE 825
Query: 159 LYRQAAVLGDP-------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
Y+ ++ P A P + ++A + A+ + + AQ LA C G
Sbjct: 826 YYQISSQSHYPRAVSNLGLFYELGKAGPIDEQKAFECYQIAADSQYPPAQCNLACCYEDG 885
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
G D +LQ+A Y AA+ R +YN + +G G + + A + + A+ G+
Sbjct: 886 IGTDIDLQKAFELYKAAAQRNSTRGLYNVARFLEYGIGCDVDYDLAFENYQSASQMGYLD 945
Query: 266 AQLEHG----LGLFTEGEMMKAVVYLELA 290
A + G G + KA+ Y A
Sbjct: 946 ADIALGNMYEFGRGVSQDYQKAIEYYSKA 974
Score = 45.1 bits (105), Expect = 0.047, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 5/169 (2%)
Query: 135 GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRA 194
G+ + + A +Y ++ + LY A L + + A + AS G++ A
Sbjct: 887 GTDIDLQKAFELYKAAAQRNSTRGLYNVARFLEYGIGCDVDYDLAFENYQSASQMGYLDA 946
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
L GRGV + Q+A +Y +A + Y R Y + Y G G+ A K+
Sbjct: 947 DIALGNMYEFGRGVSQDYQKAIEYYSKAVDQDYSRGYYALATLYKSGLGVEKDTPLALKY 1006
Query: 255 MKRAADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAA 298
AAD GH A + E E M KA+ Y + A G A
Sbjct: 1007 YTIAADKGHVSAMYNLAVLYDFEAEEQYRDMTKAIQYYQEAVDKGHYGA 1055
>gi|309780215|ref|ZP_07674966.1| Sel1 repeat protein [Ralstonia sp. 5_7_47FAA]
gi|308920918|gb|EFP66564.1| Sel1 repeat protein [Ralstonia sp. 5_7_47FAA]
Length = 237
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+ + A D F + A RG+ LA + +M L R + P +
Sbjct: 43 KNDFGHAFDEFAEAAQRGNRLAQFNYAMM------------LMRGEGTVARP-------D 83
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAVK L +A+ AQ+ RG V +L+EA +WY RAA GG+V A +
Sbjct: 84 EAVKWLRRAADNQMTHAQFAYGELFERGELVPRSLEEANKWYERAAAGGHVEAQRALATD 143
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y G G+P + +A W K+AA+ G +Q
Sbjct: 144 YFTGRGVPRDYGRAFSWYKKAAEGGDAPSQ 173
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G EA +W RAA+ A + + GE +
Sbjct: 55 EAAQRGNRLAQFNYAMMLMRGEGTVARPDEAVKWLRRAADNQMTHAQFAYGELFERGELV 114
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
P S +A KW +RAA GH +AQ FT
Sbjct: 115 PRSLEEANKWYERAAAGGHVEAQRALATDYFT 146
>gi|189501501|ref|YP_001957218.1| Sel1 domain-containing protein [Candidatus Amoebophilus asiaticus
5a2]
gi|189496942|gb|ACE05489.1| Sel1 domain protein repeat-containing protein [Candidatus
Amoebophilus asiaticus 5a2]
Length = 763
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
IS R+ A +G+ AQ P + +A+K +A+ AG+V AQ L
Sbjct: 336 ISNIRRHAKMGNVLAQNNLGYMYRNGVEFPLDYTKAIKWYTRAAKAGNVLAQTNLGYMYD 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+G GV N ++A +WY RAA+ GY A N L Y G+ +R+A KW +AA+ +
Sbjct: 396 KGLGVAPNSKQANKWYKRAAKQGYAAAQTNLGLSYQKELGVAQDYRKAFKWCMKAAEQAY 455
Query: 264 GKAQLEHGL 272
G AQ G+
Sbjct: 456 GDAQANLGI 464
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G + KA+ + + A G+ LA + G MY DK LG
Sbjct: 355 GYMYRNGVEFPLDYTKAIKWYTRAAKAGNVLAQTNLGYMY---DKG------------LG 399
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P N+++A K +A+ G+ AQ L L + GV + ++A +W ++AAE Y
Sbjct: 400 ---VAP-NSKQANKWYKRAAKQGYAAAQTNLGLSYQKELGVAQDYRKAFKWCMKAAEQAY 455
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A N + Y G G+ ++ QA W RAA + AQ
Sbjct: 456 GDAQANLGIIYRDGLGIEKNYEQALMWYTRAASLENRVAQ 495
>gi|319779711|ref|YP_004130624.1| hypothetical protein TEQUI_1569 [Taylorella equigenitalis MCE9]
gi|317109735|gb|ADU92481.1| hypothetical protein TEQUI_1569 [Taylorella equigenitalis MCE9]
Length = 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEAA 156
+A G + G GV +N A+ + K AA+G A+ + G MY + +DK
Sbjct: 93 DAHYQFELGYMYYKGDGVTQNHPLAVQWYEKSAAQGFNHAITNLGFMYMMGYGVDK---- 148
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
N +A++L +A+ A + L +G GV+ +L++
Sbjct: 149 ------------------NYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTN 190
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y +AA + A YN + Y FG+G+ ++A +W K+AA+ H AQ
Sbjct: 191 ELYEKAANKNHTEAQYNLGIHYKFGKGVTKDDKKAMEWYKKAAEADHYLAQ 241
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 18/173 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEMDKK-EAAISLYRQAAVLGDP 169
G GV KN KA++ + K A++ T A G MY W ++ E LY +AA
Sbjct: 143 GYGVDKNYSKAIELYEKAASKDFTEAYFHLGYMYEKGWGVEPSLEKTNELYEKAANKNHT 202
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
AQ + ++A++ +A+ A H AQ LA +G GV+ + A
Sbjct: 203 EAQYNLGIHYKFGKGVTKDDKKAMEWYKKAAEADHYLAQRNLAYLYEKGEGVEHDYDLAM 262
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
WY +AA+ A N L Y +G+G + + A W A D H KA E
Sbjct: 263 EWYKKAAKHNDPVAQNNLGLLYEYGKGTSKNWKNAIMWYTLACD-NHEKAGCE 314
>gi|409249912|ref|YP_006885727.1| Protein sel-1 homolog 1 Suppressor of lin-12-like protein 1;
Sel-1L; Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|320085740|emb|CBY95518.1| Protein sel-1 homolog 1 Suppressor of lin-12-like protein 1;
Sel-1L; Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 509
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|417333430|ref|ZP_12116978.1| tetratricopeptide repeat family protein, partial [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353578450|gb|EHC40284.1| tetratricopeptide repeat family protein, partial [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
Length = 356
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 123 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 182
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 183 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 242
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 243 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 299
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 153 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 212
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 213 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 243
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA
Sbjct: 19 AQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVY 78
Query: 254 WM 255
W+
Sbjct: 79 WL 80
>gi|161613749|ref|YP_001587714.1| hypothetical protein SPAB_01474 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363113|gb|ABX66881.1| hypothetical protein SPAB_01474 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 509
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|237746263|ref|ZP_04576743.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377614|gb|EEO27705.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA +L K + G GV K KAL + K A +G+ A + MY + +I
Sbjct: 58 EAQFIL--AKMYDFGEGVNKMPQKALYWYEKSAEQGNPKAQNNLAYMYSNGEGVNKSI-- 113
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
++A +L +A G AQ+ L L +G+G+D + ++A WY
Sbjct: 114 -KKAFILYSLSAN----------------QGLSAAQFNLGLMYSKGKGIDQDYKKALFWY 156
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
++AE Y +A + + Y GEG+P + +A +W K+AA G+ ++ G + E
Sbjct: 157 KKSAEQNYTKAFHALGVAYQNGEGVPANRDEAIRWYKKAAAQGYARSMANLGSLYYPE 214
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ +G GV K++ KA + A +G + A + GLMY K + Y++A +
Sbjct: 103 YSNGEGVNKSIKKAFILYSLSANQGLSAAQFNLGLMY---SKGKGIDQDYKKALFWYKKS 159
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ + +A + L + G GV N EA RWY +AA GY R+
Sbjct: 160 AE----------------QNYTKAFHALGVAYQNGEGVPANRDEAIRWYKKAAAQGYARS 203
Query: 231 MYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
M N SL Y G S +A KW A D G K GLGL
Sbjct: 204 MANLGSLYYPEDAGDLESWDEAYKWYSMAIDHGDRK-NAPLGLGL 247
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EA+ L+ + + +G+ AQ+ LA G GV+ Q+A WY ++AE G +A N +
Sbjct: 42 KEALPLIEKEAKSGNAEAQFILAKMYDFGEGVNKMPQKALYWYEKSAEQGNPKAQNNLAY 101
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELAT 291
YS GEG+ S ++A +A+ G AQ GL ++++G + KA+ + + +
Sbjct: 102 MYSNGEGVNKSIKKAFILYSLSANQGLSAAQFNLGL-MYSKGKGIDQDYKKALFWYKKSA 160
Query: 292 RAGETAADHVKNVILQQLSAT--SRDRAM 318
T A H V Q +RD A+
Sbjct: 161 EQNYTKAFHALGVAYQNGEGVPANRDEAI 189
>gi|438059179|ref|ZP_20856620.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435313876|gb|ELO87401.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
Length = 470
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 237 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 296
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 297 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 356
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 357 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 413
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 19 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 78
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 79 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 138
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 139 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 197
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 267 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 326
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 327 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 357
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L Q + G AQ+ L GR V + + A +W +A + G + + Y++GE
Sbjct: 3 LEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGE 62
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRAGETAADHV 301
PLS ++A +W ++AA+ G Q G ++ +G + LE +A D
Sbjct: 63 NFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTND-- 120
Query: 302 KNVILQQLSATS 313
V+ Q SA+S
Sbjct: 121 AGVVRGQGSASS 132
>gi|62317347|ref|YP_223200.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|83269325|ref|YP_418616.1| Sel1-like repeat-containing protein [Brucella melitensis biovar
Abortus 2308]
gi|423168766|ref|ZP_17155468.1| hypothetical protein M17_02455 [Brucella abortus bv. 1 str. NI435a]
gi|423171801|ref|ZP_17158475.1| hypothetical protein M19_02333 [Brucella abortus bv. 1 str. NI474]
gi|423174468|ref|ZP_17161138.1| hypothetical protein M1A_01865 [Brucella abortus bv. 1 str. NI486]
gi|423176345|ref|ZP_17163011.1| hypothetical protein M1E_00607 [Brucella abortus bv. 1 str. NI488]
gi|423181230|ref|ZP_17167870.1| hypothetical protein M1G_02329 [Brucella abortus bv. 1 str. NI010]
gi|423184363|ref|ZP_17170999.1| hypothetical protein M1I_02331 [Brucella abortus bv. 1 str. NI016]
gi|423187513|ref|ZP_17174126.1| hypothetical protein M1K_02330 [Brucella abortus bv. 1 str. NI021]
gi|423189934|ref|ZP_17176543.1| hypothetical protein M1M_01615 [Brucella abortus bv. 1 str. NI259]
gi|62197540|gb|AAX75839.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82939599|emb|CAJ12579.1| Putative peptidoglycan binding domain 1:Sel1-like repeat [Brucella
melitensis biovar Abortus 2308]
gi|374536223|gb|EHR07743.1| hypothetical protein M19_02333 [Brucella abortus bv. 1 str. NI474]
gi|374537972|gb|EHR09482.1| hypothetical protein M17_02455 [Brucella abortus bv. 1 str. NI435a]
gi|374539037|gb|EHR10543.1| hypothetical protein M1A_01865 [Brucella abortus bv. 1 str. NI486]
gi|374545820|gb|EHR17280.1| hypothetical protein M1G_02329 [Brucella abortus bv. 1 str. NI010]
gi|374546663|gb|EHR18122.1| hypothetical protein M1I_02331 [Brucella abortus bv. 1 str. NI016]
gi|374554947|gb|EHR26357.1| hypothetical protein M1E_00607 [Brucella abortus bv. 1 str. NI488]
gi|374555317|gb|EHR26726.1| hypothetical protein M1K_02330 [Brucella abortus bv. 1 str. NI021]
gi|374555974|gb|EHR27379.1| hypothetical protein M1M_01615 [Brucella abortus bv. 1 str. NI259]
Length = 913
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N+++AA+WY AA+ G AM
Sbjct: 665 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKKAAKWYQLAADQGNASAM 724
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 725 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 784
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V W+A P
Sbjct: 785 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVKLWKAKP 825
>gi|410688508|ref|YP_006961777.1| truncated hypothetical protein, Sel1 domain protein [Psychrobacter
sp. DAB_AL60]
gi|380861024|gb|AFF18226.1| truncated hypothetical protein, Sel1 domain protein [Psychrobacter
sp. DAB_AL60]
Length = 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A+ Y +AA G+ + A E K + Q +I VR QY L + +GR V + +A
Sbjct: 44 AVEWYTKAAEQGN-----SKALEWFKRMDQRNIEQRVREQYDLGVMYEKGRDVRKDYTKA 98
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
WY +AAE G+ A Y+ ++ Y G+G+ +A +W +AA+ GH AQ G ++
Sbjct: 99 IEWYTKAAEQGHSDAQYHLAVMYKKGQGIAQDMTKAIEWYTKAAEQGHSDAQYNLG-DMY 157
Query: 276 TEG-----EMMKAV-VYLELATRA 293
+G ++ KA+ +YLE A ++
Sbjct: 158 EKGQGVPQDITKALELYLEAAEQS 181
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
AL L + G +K G GV ++ KA++ + K A +G++ A+ + MD++
Sbjct: 14 ALAELGHSDAQYNLGDMYKLGDGVPRDSHKAVEWYTKAAEQGNSKALE----WFKRMDQR 69
Query: 154 EAAISLYRQAAVLGDPAAQP----ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+ R+ LG + + +A++ +A+ GH AQY LA+ +G+G+
Sbjct: 70 NIEQRV-REQYDLGVMYEKGRDVRKDYTKAIEWYTKAAEQGHSDAQYHLAVMYKKGQGIA 128
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
++ +A WY +AAE G+ A YN Y G+G+P +A + AA+ H +Q
Sbjct: 129 QDMTKAIEWYTKAAEQGHSDAQYNLGDMYEKGQGVPQDITKALELYLEAAEQSHVDSQ 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + +A +L + + G+ Q LA G+GV + +A WY +AAE G A Y
Sbjct: 254 PQDYAKAAELYTKVAEKGYADTQIALADMYKEGQGVPQDYAKAFEWYSKAAEQGLYGAQY 313
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAAD 260
N ++ + G G+P +A++W +AA+
Sbjct: 314 NLAVMFEKGLGVPQDKDKAKEWHTKAAE 341
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-------AISLYRQA 163
+K G+G+ +++ KA++ + K A +G + A + G MY +K + A+ LY +A
Sbjct: 121 YKKGQGIAQDMTKAIEWYTKAAEQGHSDAQYNLGDMY---EKGQGVPQDITKALELYLEA 177
Query: 164 AVLGDPAAQPA---NAEE----------------------------AVKLLYQASIAGHV 192
A +Q EE AV+ L + + G
Sbjct: 178 AEQSHVDSQETLFCKYEEGNSFFNHYLYGPKSHYFFLETAKRGYNRAVEWLIKIAEQGGD 237
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
Q LA G+GV + +AA Y + AE GY + Y G+G+P + +A
Sbjct: 238 NNQLTLANMYKEGQGVPQDYAKAAELYTKVAEKGYADTQIALADMYKEGQGVPQDYAKAF 297
Query: 253 KWMKRAADCGHGKAQ------LEHGLGL 274
+W +AA+ G AQ E GLG+
Sbjct: 298 EWYSKAAEQGLYGAQYNLAVMFEKGLGV 325
>gi|395827877|ref|XP_003787118.1| PREDICTED: protein sel-1 homolog 1 [Otolemur garnettii]
Length = 732
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDPAAQPA--- 174
+A D F A G++ AM G MY E E A+ +++AA +G+P Q
Sbjct: 377 RAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGM 436
Query: 175 ----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
N + A+K +A+ G V Q QL + G GV + ++A +++ A++
Sbjct: 437 AYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQ 496
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
GG++ A YN + ++ G G+ S A + K + G +L + +G+ AV
Sbjct: 497 GGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAV 556
Query: 285 V-YLELATRAGETAADHVKNVILQQLSAT 312
+ YL LA + E A + IL Q AT
Sbjct: 557 IQYLLLAEQGYEVAQSNAA-FILDQREAT 584
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 19/101 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +GRGV+ N D AL F K A +G + G MY+ I + R
Sbjct: 435 GMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYN------GIGVKR------ 482
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+ ++A+K AS GH+ A Y LA G GV
Sbjct: 483 -------DYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 516
>gi|294661165|ref|YP_003573040.1| Sel1 domain-containing protein [Candidatus Amoebophilus asiaticus
5a2]
gi|227336315|gb|ACP20912.1| sel1 repeat protein [Candidatus Amoebophilus asiaticus 5a2]
Length = 117
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EAV+ +A+ G+V AQ L + + GRGV+ + +A WY +AAE GY A +N
Sbjct: 18 EAVEWYEKAASQGYVAAQNNLGIMYNNGRGVEKDDAKAVEWYKKAAEKGYAYAQFNLGRM 77
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
Y G+G+ + +A++W ++AA G KA++
Sbjct: 78 YENGQGVAKDYAKAKEWYRKAARRGDAKAKV 108
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L + G+GV+ + EA WY +AA GYV A N + Y+ G G+ +A +W K+
Sbjct: 2 LGWMYYNGQGVNKDDAEAVEWYEKAASQGYVAAQNNLGIMYNNGRGVEKDDAKAVEWYKK 61
Query: 258 AADCGHGKAQLEHG 271
AA+ G+ AQ G
Sbjct: 62 AAEKGYAYAQFNLG 75
>gi|56413318|ref|YP_150393.1| hypothetical protein SPA1113 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56127575|gb|AAV77081.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 509
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG +
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRDVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
>gi|297831318|ref|XP_002883541.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329381|gb|EFH59800.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 101
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPS 329
EG M+K+++YLELA R GE AA HVK VI Q LSATSR + ++WR +P+
Sbjct: 44 FLMEGAMLKSILYLELAERGGEVAAAHVKEVIHQHLSATSRGHVIHQANNWRPLPA 99
>gi|291288401|ref|YP_003505217.1| Sel1 domain-containing protein repeat-containing protein
[Denitrovibrio acetiphilus DSM 12809]
gi|290885561|gb|ADD69261.1| Sel1 domain protein repeat-containing protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 216
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL-----MYWEMDKKEAAISLYRQAAV 165
++HG GV +N+ AL +++ A GS A G +Y+E K+A + Y++AA
Sbjct: 48 YEHGEGVPQNIKMALRMYIRAAKLGSAEAKFLLGSFCSSGIYFEKSTKKAFV-FYKEAAD 106
Query: 166 LGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G P A N E+A + GH Q +L L GRG +
Sbjct: 107 QGMPDAIYKTGLFYLFGYLGVKNLEQAFNYFEMGANLGHPPCQNRLGLLYAGGRGTLKSD 166
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+A WY +AAE G+ AMYN S G G +++A KW AA
Sbjct: 167 DDAVYWYRKAAEQGHGEAMYNLGCMLSTGRGGKADNKEALKWFNLAA 213
>gi|16765101|ref|NP_460716.1| hypothetical protein STM1760 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993199|ref|ZP_02574294.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168241338|ref|ZP_02666270.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194448382|ref|YP_002045802.1| hypothetical protein SeHA_C1954 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197264161|ref|ZP_03164235.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|374980768|ref|ZP_09722098.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|378450327|ref|YP_005237686.1| hypothetical protein STM14_2127 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378984320|ref|YP_005247475.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989100|ref|YP_005252264.1| hypothetical protein STMUK_1732 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379700930|ref|YP_005242658.1| hypothetical protein STM474_1776 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383496451|ref|YP_005397140.1| hypothetical protein UMN798_1851 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386591594|ref|YP_006087994.1| hypothetical protein SU5_02364 [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|419730584|ref|ZP_14257530.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419732270|ref|ZP_14259176.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419745364|ref|ZP_14272002.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419748417|ref|ZP_14274913.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421571928|ref|ZP_16017595.1| hypothetical protein CFSAN00322_17075 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421577790|ref|ZP_16023375.1| hypothetical protein CFSAN00326_00245 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421583093|ref|ZP_16028622.1| hypothetical protein CFSAN00328_03920 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422025934|ref|ZP_16372354.1| hypothetical protein B571_08831 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422030969|ref|ZP_16377153.1| hypothetical protein B572_08911 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427549997|ref|ZP_18927662.1| hypothetical protein B576_08923 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427565852|ref|ZP_18932384.1| hypothetical protein B577_08384 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427585769|ref|ZP_18937167.1| hypothetical protein B573_08335 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427609032|ref|ZP_18942031.1| hypothetical protein B574_08619 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427633346|ref|ZP_18946928.1| hypothetical protein B575_08934 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427655987|ref|ZP_18951693.1| hypothetical protein B578_08599 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427661129|ref|ZP_18956602.1| hypothetical protein B579_09224 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427668330|ref|ZP_18961403.1| hypothetical protein B580_08927 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|16420289|gb|AAL20675.1| putative TPR repeat protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194406686|gb|ACF66905.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197242416|gb|EDY25036.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205328697|gb|EDZ15461.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205339425|gb|EDZ26189.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|267993705|gb|ACY88590.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|312912748|dbj|BAJ36722.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224388|gb|EFX49451.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323130029|gb|ADX17459.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332988647|gb|AEF07630.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|380463272|gb|AFD58675.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381294592|gb|EIC35731.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381303119|gb|EIC44148.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306080|gb|EIC46973.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381314070|gb|EIC54845.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383798638|gb|AFH45720.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|402519008|gb|EJW26373.1| hypothetical protein CFSAN00322_17075 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402526497|gb|EJW33772.1| hypothetical protein CFSAN00326_00245 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402532559|gb|EJW39751.1| hypothetical protein CFSAN00328_03920 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414018947|gb|EKT02576.1| hypothetical protein B571_08831 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414019430|gb|EKT03044.1| hypothetical protein B576_08923 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414021443|gb|EKT04991.1| hypothetical protein B572_08911 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414033156|gb|EKT16124.1| hypothetical protein B577_08384 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035019|gb|EKT17921.1| hypothetical protein B573_08335 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414038008|gb|EKT20739.1| hypothetical protein B574_08619 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414047847|gb|EKT30110.1| hypothetical protein B578_08599 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414049325|gb|EKT31540.1| hypothetical protein B575_08934 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414053755|gb|EKT35730.1| hypothetical protein B579_09224 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414059850|gb|EKT41393.1| hypothetical protein B580_08927 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
Length = 509
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|239908141|ref|YP_002954882.1| hypothetical protein DMR_35050 [Desulfovibrio magneticus RS-1]
gi|239798007|dbj|BAH76996.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 705
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 156 AISLYRQAAVLGDP--------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
A++ YR+AA GD A +P + EA K QA+ G RAQ+ L L
Sbjct: 463 AVTYYREAANAGDLEAGFALGSLLSKGLAGEP-DFAEARKWYEQAAAHGDARAQFNLGLM 521
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G+G N EA RW L AA+GG A N + G G P ++A +W + AA
Sbjct: 522 YLTGKGGPVNDAEALRWMLEAAKGGDAHARSNVATMTLTGRGTPSDPQEAFRWYRLAAGQ 581
Query: 262 GHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA-GETA----ADHVKNVILQQLSA 311
G+ +AQ G + EG ++ A+ +L LA+RA G A A K V+ ++L+
Sbjct: 582 GYAQAQAMLA-GFYYEGRVVPRDFESALFWLTLASRAPGGDALLQRAARAKAVLEKRLTP 640
Query: 312 TSRDRAMLVVDSWRAMP 328
+R + +++ P
Sbjct: 641 DQLERVAARLTAYKPAP 657
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +AV +A+ AG + A + L L +G + + EA +WY +AA G RA +N
Sbjct: 458 ANLAKAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFAEARKWYEQAAAHGDARAQFN 517
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L Y G+G P++ +A +WM AA G A+
Sbjct: 518 LGLMYLTGKGGPVNDAEALRWMLEAAKGGDAHAR 551
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 53/140 (37%), Gaps = 36/140 (25%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG------ 226
P + LL QA+ AG +A Y +AL G+GV N EA RW +AAE G
Sbjct: 385 PGDPTAGAALLSQAAWAGQPQAMYAMALLHLSGQGVSGNPAEAFRWCAKAAEAGVPEAKG 444
Query: 227 ---------------------YVRAMYNTS-LCYSFGEGLPLSH--------RQARKWMK 256
Y R N L F G LS +ARKW +
Sbjct: 445 LLAALSEEEFPSAANLAKAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFAEARKWYE 504
Query: 257 RAADCGHGKAQLEHGLGLFT 276
+AA G +AQ GL T
Sbjct: 505 QAAAHGDARAQFNLGLMYLT 524
>gi|395507833|ref|XP_003758223.1| PREDICTED: protein sel-1 homolog 2 [Sarcophilus harrisii]
Length = 685
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD------------------KKEAA 156
+G+ ++ KAL FLK A GST AM G MY E + K A
Sbjct: 311 KGLEQDFYKALYYFLKAAKAGSTNAMAFLGKMYLEGNPAVPQNNVTAFKYFSMAANKGNA 370
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
I L+ + P + +EA+KL +A+ G AQYQL + G GV + + A
Sbjct: 371 IGLHGLGLIYFHGKGVPVDYDEALKLFQKAAEKGWPNAQYQLGFMYYSGSGVWKDYKLAF 430
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
+++ A++ G A+Y + Y+ G G+ S R A + K + G + +
Sbjct: 431 KYFYLASQSGQPLAIYYLAEMYASGTGVLRSCRTAVELYKGVCELGRWAEKFLTAYFAYK 490
Query: 277 EGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+G++ +++ L G A IL+ AT ++
Sbjct: 491 DGDINSSLIQYALLAEMGYEVAQSNSAFILESQKATILEK 530
>gi|307179553|gb|EFN67867.1| Protein sel-1-like protein 1 [Camponotus floridanus]
Length = 763
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAAV 165
++ GRGV + ++A+ F A G+ +AM G +Y E + E A +++AA
Sbjct: 374 YQGGRGVPLDHERAVQYFQHAADAGNPVAMAFLGKIYLEGSEIVKQDNETAYKYFKKAAE 433
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG+P Q N +A++ QA+ G V Q QL G GV +
Sbjct: 434 LGNPVGQSGLGLMYLYGMGVERNTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRDY 493
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A++ G+V A YN + ++ G GL S A + MK A+ G QL
Sbjct: 494 KLANKYFTLASQSGHVLAYYNLAQMHATGTGLMRSCPTAVELMKNVAERGKWSDQLMVAH 553
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 306
+ +G + +A + L + G A IL
Sbjct: 554 NDYRDGRVNEAFLNYALFSEMGYEVAQSNAAFIL 587
>gi|381394160|ref|ZP_09919878.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379330432|dbj|GAB55011.1| sel1 domain protein repeat-containing protein [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 365
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 151 DKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQ 197
+K+ + I + +Q A GD AQ + +EA K A+ G +AQ
Sbjct: 22 EKEISKIEVIQQLAQDGDAEAQLELGVMYHSGDGVLKDFKEAAKWYRLAAEQGDAKAQQL 81
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
L L H G GV + +EA +WYL +AE G+ Y YS G+G+ ++A KW K
Sbjct: 82 LGLMHHAGDGVPQSSEEAMKWYLLSAEQGFAEIQYVLGRMYSSGDGVLKDSKEAVKWFKL 141
Query: 258 AADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADH 300
+A+ G AQ + G +F GE + +AV + +L+ G+ +A +
Sbjct: 142 SAEQGDASAQYDLG-NMFDRGEGVLKDSKEAVKWFKLSAEQGDASAQY 188
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + G GV K+ +A+ F A +G A D G M+ D+ E +
Sbjct: 119 GRMYSSGDGVLKDSKEAVKWFKLSAEQGDASAQYDLGNMF---DRGEGVLK--------- 166
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+++EAVK ++ G AQY L RG GV + +EA +W+ + E G
Sbjct: 167 -------DSKEAVKWFKLSAEQGDASAQYNLGNMYARGEGVLKDSKEAVKWFKLSVEQGN 219
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
A N Y+ GEG+ ++A KW K +A+ G+ AQ G ++
Sbjct: 220 AFAQSNLGFMYAIGEGVLKDFKEAEKWYKLSAEQGNAFAQSNLGFMYYS 268
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + G GV K+ +A + A +G A GLM+ D E
Sbjct: 39 DAEAQLELGVMYHSGDGVLKDFKEAAKWYRLAAEQGDAKAQQLLGLMHHAGDGVPQSSEE 98
Query: 156 AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y +A G Q +++EAVK ++ G AQY L
Sbjct: 99 AMKWYLLSAEQGFAEIQYVLGRMYSSGDGVLKDSKEAVKWFKLSAEQGDASAQYDLGNMF 158
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
RG GV + +EA +W+ +AE G A YN Y+ GEG+ ++A KW K + + G
Sbjct: 159 DRGEGVLKDSKEAVKWFKLSAEQGDASAQYNLGNMYARGEGVLKDSKEAVKWFKLSVEQG 218
Query: 263 HGKAQLEHGLGLFTEGE 279
+ AQ G ++ GE
Sbjct: 219 NAFAQSNLGF-MYAIGE 234
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G F G GV K+ +A+ F A +G A + G MY D KEA + ++
Sbjct: 155 GNMFDRGEGVLKDSKEAVKWFKLSAEQGDASAQYNLGNMYARGEGVLKDSKEA-VKWFKL 213
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+ G+ AQ + +EA K ++ G+ AQ L + G GV
Sbjct: 214 SVEQGNAFAQSNLGFMYAIGEGVLKDFKEAEKWYKLSAEQGNAFAQSNLGFMYYSGHGVL 273
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
+ +EAA+ Y AAE G A +N Y+ GEG+ + W
Sbjct: 274 KDFKEAAKNYRLAAEQGNAVAQFNLGNMYAMGEGVLQDFITSYSW 318
>gi|393781483|ref|ZP_10369678.1| hypothetical protein HMPREF1071_00546 [Bacteroides salyersiae
CL02T12C01]
gi|392676546|gb|EIY69978.1| hypothetical protein HMPREF1071_00546 [Bacteroides salyersiae
CL02T12C01]
Length = 828
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
Query: 101 AMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEA 155
A + G + +G G ++ +A++ + K A S +AM+ G Y ++ DK E
Sbjct: 602 AYAQFKMGDYYFYGYGPCMEDNKQAVEWYEKAVANNSPMAMLRLGEYYLYDYDKLNESEK 661
Query: 156 AISLYRQAAVLGDPA-----------AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
A ++QAA L + N EA K A+ G+ + Y+ LC +
Sbjct: 662 AFVYFKQAAELEFYSEGIGICYEMGIGVEENETEAFKYYTLAANNGNTMSMYRTGLCYYN 721
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G GV NLQEA RW+ AA V A Y +GEG +W+ +AA+
Sbjct: 722 GVGVKQNLQEAFRWFNDAAGQESVHAYYYLGKMLMYGEGCTPDAETGLQWLLKAAEMNSD 781
Query: 265 KAQLEHG 271
KAQ E G
Sbjct: 782 KAQFELG 788
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLM-------------YWEMDKKEAAISLYRQAAVLGDP 169
K+ + + K AA+GS AMV+ G + + + ++E +YR L +
Sbjct: 448 KSKEYYEKAAAQGSAYAMVELGFLQENERNYEQAFELFSKAAEQEYPYGMYRTGFYLSEG 507
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A EE +A+ AG A + + C GV+ + +A WY + E R
Sbjct: 508 ILGEAKPEEGFAWYLKAAEAGDTDAMFAVGRCYKNAVGVEEDPDKALEWYHKGEENNEPR 567
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y G G+ + +A ++M RAA+ + AQ + G F
Sbjct: 568 CITELGLAYENGYGVEENPHKAVEYMTRAAETNYAYAQFKMGDYYF 613
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV +N +A + A G+T++M GL Y+
Sbjct: 680 GICYEMGIGVEENETEAFKYYTLAANNGNTMSMYRTGLCYY------------------- 720
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N +EA + A+ V A Y L L G G + + +W L+AAE
Sbjct: 721 NGVGVKQNLQEAFRWFNDAAGQESVHAYYYLGKMLMYGEGCTPDAETGLQWLLKAAEMNS 780
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A + Y G G+ + A +W ++AA+ G+ KA
Sbjct: 781 DKAQFELGNAYLSGNGVEENDEIAMEWFEKAAENGNEKA 819
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAAQP 173
+N ++A + F K A + M G E K E + Y +AA GD A
Sbjct: 475 ERNYEQAFELFSKAAEQEYPYGMYRTGFYLSEGILGEAKPEEGFAWYLKAAEAGDTDAMF 534
Query: 174 A-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
A + ++A++ ++ R +L L G GV+ N +A +
Sbjct: 535 AVGRCYKNAVGVEEDPDKALEWYHKGEENNEPRCITELGLAYENGYGVEENPHKAVEYMT 594
Query: 221 RAAEGGYVRAMYNTSLCYSFGEGLPLS-HRQARKWMKRA 258
RAAE Y A + Y +G G + ++QA +W ++A
Sbjct: 595 RAAETNYAYAQFKMGDYYFYGYGPCMEDNKQAVEWYEKA 633
>gi|260431825|ref|ZP_05785796.1| Sel1 domain protein repeat-containing protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415653|gb|EEX08912.1| Sel1 domain protein repeat-containing protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 418
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++HG GV ++DKAL+ + + A G +MV G+ + D A ++R
Sbjct: 238 YEHGDGVAPDIDKALEYYERAAFYGYGPSMVRLGIFH--RDGTHVAQDMHR--------- 286
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVR 229
AV L +A+ G+V A L L G+ G ++++A +Y +AAE V
Sbjct: 287 --------AVDYLERAADHGNVDAAVHLGLIYETGQNGYPKDIEKAVEYYFQAAEEDDVV 338
Query: 230 AMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
A++N SL Y +G+P + A RAA+ GH +Q + G L GE+ A+ Y
Sbjct: 339 ALHNLGSLTYHGRDGVPQDTQAAFVLWGRAAELGHMASQRKFGRLLHEAGEIDGALKYYR 398
Query: 289 LATRAGETAA 298
LA G+ A
Sbjct: 399 LAAEQGDDVA 408
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E A++ A++ G A LA + G V N + A WY+ AA+ G M+N +
Sbjct: 177 EMALEFSELAAMEGSGLAMNTLASLYNEGEIVPENDETAFGWYMAAADAGLSMGMHNVAY 236
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
Y G+G+ +A ++ +RAA G+G + + G+ G +M +AV YLE A
Sbjct: 237 GYEHGDGVAPDIDKALEYYERAAFYGYGPSMVRLGIFHRDGTHVAQDMHRAVDYLERAAD 296
Query: 293 AGETAA 298
G A
Sbjct: 297 HGNVDA 302
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
SLY + ++ P N E A A+ AG + +A G GV ++ +A
Sbjct: 200 SLYNEGEIV------PENDETAFGWYMAAADAGLSMGMHNVAYGYEHGDGVAPDIDKALE 253
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+Y RAA GY +M + + G + +A +++RAAD G+ A + GL ++
Sbjct: 254 YYERAAFYGYGPSMVRLGIFHRDGTHVAQDMHRAVDYLERAADHGNVDAAVHLGL-IYET 312
Query: 278 G------EMMKAVVYLELATRAGETAADH 300
G ++ KAV Y A + A H
Sbjct: 313 GQNGYPKDIEKAVEYYFQAAEEDDVVALH 341
>gi|237746477|ref|ZP_04576957.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377828|gb|EEO27919.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 523
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
F+ G G KN +A + + + A G A G +Y + A A+ YR+AA
Sbjct: 162 FEKGLGTTKNSREAFNWYHRAATAGIPNAQYKLGYLYEKGIGVHASPAQALLWYRKAAEG 221
Query: 167 GDPAAQP----ANAE---------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G +AQ A +E EA + Y+A+ G+V+AQ LA G GV +
Sbjct: 222 GIASAQTRLGRAYSEGRGVKRDDLEAARWFYKAAEQGNVQAQTALAWLYETGLGVGKDEP 281
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE---- 269
AA WY +AAE GY A N Y G G+ ARKW + AA G+ A
Sbjct: 282 RAASWYTKAAEKGYAPAQNNLGYLYDSGTGVMQDFITARKWYEAAAAQGNVSAMFNLGQL 341
Query: 270 HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS----ATSRDRA 317
H LG T + +A + A G A + N+ + L AT R RA
Sbjct: 342 HYLGHGTPQDYARAAGWFAKAAEQGHPKA--LNNLGMAYLDGMGVATDRVRA 391
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
++ +V G F G GV + KA +LK A + ++A + +
Sbjct: 114 KDPLVQTALGNMFSMGLGVPTDHGKAFSWYLKAARQNHSIAQL---------------YT 158
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
Y LG N+ EA ++A+ AG AQY+L +G GV + +A W
Sbjct: 159 AYSFEKGLGTTK----NSREAFNWYHRAATAGIPNAQYKLGYLYEKGIGVHASPAQALLW 214
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGL 272
Y +AAEGG A YS G G+ +A +W +AA+ G+ +AQ E GL
Sbjct: 215 YRKAAEGGIASAQTRLGRAYSEGRGVKRDDLEAARWFYKAAEQGNVQAQTALAWLYETGL 274
Query: 273 GL 274
G+
Sbjct: 275 GV 276
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYR 161
R G+ + GRGV+++ +A F K A +G+ A +Y + K E A S Y
Sbjct: 229 RLGRAYSEGRGVKRDDLEAARWFYKAAEQGNVQAQTALAWLYETGLGVGKDEPRAASWYT 288
Query: 162 QAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA G AQ + A K A+ G+V A + L + G G
Sbjct: 289 KAAEKGYAPAQNNLGYLYDSGTGVMQDFITARKWYEAAAAQGNVSAMFNLGQLHYLGHGT 348
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ AA W+ +AAE G+ +A+ N + Y G G+ +A + +AA G+ AQ
Sbjct: 349 PQDYARAAGWFAKAAEQGHPKALNNLGMAYLDGMGVATDRVRAGHYFLKAAKRGNAHAQ 407
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 30/191 (15%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
RAAS K+ P + + L + G GV ++ A + AA+G+ AM
Sbjct: 282 RAASWYTKAAEKGYAPAQNNLGYL-----YDSGTGVMQDFITARKWYEAAAAQGNVSAMF 336
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
+ G +++ LG P + A +A+ GH +A L +
Sbjct: 337 NLGQLHY-----------------LGH--GTPQDYARAAGWFAKAAEQGHPKALNNLGMA 377
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY-SFGEGLPLSHRQ-----ARKWM 255
G GV + A ++L+AA+ G A YN + Y E L ++R ARKW
Sbjct: 378 YLDGMGVATDRVRAGHYFLKAAKRGNAHAQYNLATLYVQHPEALTKANRAKTDALARKWF 437
Query: 256 KRAADCGHGKA 266
++A GH A
Sbjct: 438 GKSAANGHAAA 448
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 150 MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+D K I LY Q L EA+ L + Q L G GV
Sbjct: 85 IDAKTRGIQLYGQQKYL-----------EALPYLMASGAQKDPLVQTALGNMFSMGLGVP 133
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WYL+AA + A T+ + G G + R+A W RAA G AQ +
Sbjct: 134 TDHGKAFSWYLKAARQNHSIAQLYTAYSFEKGLGTTKNSREAFNWYHRAATAGIPNAQYK 193
Query: 270 HGLGLFTEG 278
G L+ +G
Sbjct: 194 LGY-LYEKG 201
>gi|195503005|ref|XP_002098471.1| GE23928 [Drosophila yakuba]
gi|194184572|gb|EDW98183.1| GE23928 [Drosophila yakuba]
Length = 822
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F A G+ + G +Y E + +AA + +AA
Sbjct: 346 YQGGKVTQQDHQKALEYFSLAATAGNAVGFAFLGKLYLEGSDQIKADNDAAFKYFSKAAE 405
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+GDP Q P ++ +A+ QA+ G V Q QL G GV +
Sbjct: 406 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGDGVKTDY 465
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A ++Y A + G+V A YN + ++G G+ S A ++ K ++ G ++L H
Sbjct: 466 KLAFKYYNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMHAY 525
Query: 273 GLFTEGEMMKAVVYLELATRAGETAA 298
+ E + KA + L G A
Sbjct: 526 SDYKENRIDKAYMQYSLMAEVGYEVA 551
>gi|344924372|ref|ZP_08777833.1| hypothetical protein COdytL_06977 [Candidatus Odyssella
thessalonicensis L13]
Length = 492
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 135 GSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVK 181
G T ++ G +YW+ E AI Y ++A G AAQ A N +EAV+
Sbjct: 59 GETFYIL--GNVYWQGHSYEKAIKYYFKSAKHGHAAAQYALGYAYWRGIGIEQNYKEAVQ 116
Query: 182 LLYQASIAGHVRAQYQL--ALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
Y++++ G+ +AQ L A C+ G GV+ + +E+ +WY +AA A ++ CY
Sbjct: 117 WCYKSALQGYAKAQNFLGDAYCI--GAGVEKSYEESVKWYQQAALQNNAAAQHSLGYCYQ 174
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
G+G+ + +A +W KRAA G AQ E
Sbjct: 175 EGQGIEQNFEKAMEWYKRAATQGCPIAQFE 204
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 141 VDAGLMYWEMDK-KEAAISLYRQA-----AVLGDPAAQPANAEEAVKLLYQASIAGHVRA 194
++ GL+ + D K A I + Q +LG+ Q + E+A+K ++++ GH A
Sbjct: 34 IELGLISYSADNIKGAPIKITSQEDGETFYILGNVYWQGHSYEKAIKYYFKSAKHGHAAA 93
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
QY L RG G++ N +EA +W ++A GY +A Y G G+ S+ ++ KW
Sbjct: 94 QYALGYAYWRGIGIEQNYKEAVQWCYKSALQGYAKAQNFLGDAYCIGAGVEKSYEESVKW 153
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQA--------AVLGD 168
+KA+ + K A G A G YW E + KEA Y+ A LGD
Sbjct: 76 EKAIKYYFKSAKHGHAAAQYALGYAYWRGIGIEQNYKEAVQWCYKSALQGYAKAQNFLGD 135
Query: 169 P----AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
A + EE+VK QA++ + AQ+ L C G+G++ N ++A WY RAA
Sbjct: 136 AYCIGAGVEKSYEESVKWYQQAALQNNAAAQHSLGYCYQEGQGIEQNFEKAMEWYKRAAT 195
Query: 225 GGYVRAMYNTSLCYSF-GEGLPLSHRQARKWM 255
G A + YS EG QA W+
Sbjct: 196 QGCPIAQFELVKAYSIPPEGSNQDPMQAFNWL 227
>gi|416217041|ref|ZP_11623990.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
7169]
gi|326560892|gb|EGE11257.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
7169]
Length = 230
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
L D Q N +A + +A+ G AQ+ L + + G+GV + ++ WY +AA+
Sbjct: 46 LADEYYQQGNHAKAFEWFTKAAHQGEAEAQHNLGVMYYEGQGVRQDYYKSVEWYTKAAKQ 105
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
GY A +N +L Y+ G+G+ + +A +W +AA+ G +AQ G+ ++ EG+
Sbjct: 106 GYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGV-MYYEGQ 158
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+ N KA + F K A +G A + G+MY+E G Q +
Sbjct: 53 QGNHAKAFEWFTKAAHQGEAEAQHNLGVMYYE-----------------GQGVRQ--DYY 93
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
++V+ +A+ G+ AQ+ LAL +G GV + +A W+ +AA G A ++ +
Sbjct: 94 KSVEWYTKAAKQGYADAQFNLALMYAQGDGVRQDYHKAFEWFTKAANQGLAEAQFSLGVM 153
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y G+G+ + +A +W +AA+ G +AQ G+ ++ EG+
Sbjct: 154 YYEGQGVRQDYHKAVEWFTKAANQGFAQAQNNLGV-MYDEGQ 194
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GVR++ K+++ + K A +G A + LMY G
Sbjct: 79 GVMYYEGQGVRQDYYKSVEWYTKAAKQGYADAQFNLALMY-----------------AQG 121
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D Q + +A + +A+ G AQ+ L + + G+GV + +A W+ +AA G+
Sbjct: 122 DGVRQ--DYHKAFEWFTKAANQGLAEAQFSLGVMYYEGQGVRQDYHKAVEWFTKAANQGF 179
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+A N + Y G+G+ + A+ + +A D G
Sbjct: 180 AQAQNNLGVMYDEGQGVRQNIATAKIYYGQACDHG 214
>gi|189022598|ref|YP_001932339.1| Sel1-like repeat [Brucella abortus S19]
gi|237816900|ref|ZP_04595892.1| Localization factor podJL [Brucella abortus str. 2308 A]
gi|260544579|ref|ZP_05820400.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
gi|260759855|ref|ZP_05872203.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
292]
gi|260763094|ref|ZP_05875426.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882246|ref|ZP_05893860.1| peptidoglycan binding domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|297249385|ref|ZP_06933086.1| TPR repeat-containing protein [Brucella abortus bv. 5 str. B3196]
gi|376270967|ref|YP_005114012.1| hypothetical protein BAA13334_II00888 [Brucella abortus A13334]
gi|189021172|gb|ACD73893.1| Sel1-like repeat [Brucella abortus S19]
gi|237787713|gb|EEP61929.1| Localization factor podJL [Brucella abortus str. 2308 A]
gi|260097850|gb|EEW81724.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
gi|260670173|gb|EEX57113.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
292]
gi|260673515|gb|EEX60336.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260871774|gb|EEX78843.1| peptidoglycan binding domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|297173254|gb|EFH32618.1| TPR repeat-containing protein [Brucella abortus bv. 5 str. B3196]
gi|363402139|gb|AEW19108.1| TPR repeat-containing protein [Brucella abortus A13334]
Length = 942
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N+++AA+WY AA+ G AM
Sbjct: 694 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKKAAKWYQLAADQGNASAM 753
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 754 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 813
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V W+A P
Sbjct: 814 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVKLWKAKP 854
>gi|168260019|ref|ZP_02681992.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350911|gb|EDZ37542.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS L+ G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDLSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDLS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|444708848|gb|ELW49887.1| Protein sel-1 like protein 1 [Tupaia chinensis]
Length = 826
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 123 KALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQPA--- 174
+A D F A G++ AM G MY E E A+ +++AA +G+P Q
Sbjct: 353 RAFDYFNLAANAGNSHAMAFLGKMYSEGSDTVPQSNETALHYFKKAADMGNPVGQSGLGM 412
Query: 175 ----------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
N + A+K +A+ G V Q QL + G GV + ++A +++ A++
Sbjct: 413 AYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQ 472
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAV 284
GG++ A YN + ++ G G+ S A + K + G +L + +G+ AV
Sbjct: 473 GGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYHSYKDGDYNAAV 532
Query: 285 V-YLELATRAGETAADHVKNVILQQLSAT 312
+ YL LA + E A + IL Q AT
Sbjct: 533 IQYLLLAEQGYEVAQSNAA-FILDQREAT 560
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 74 ASFTLPQLRAASL-VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGA 132
S T+PQ +L K D P+ ++ + G + +GRGV+ N D AL F K A
Sbjct: 380 GSDTVPQSNETALHYFKKAADMGNPVGQSGL----GMAYLYGRGVQVNYDLALKYFQKAA 435
Query: 133 ARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHV 192
+G + G MY+ I + R + ++A+K AS GH+
Sbjct: 436 EQGWVDGQLQLGSMYYN------GIGVKR-------------DYKQALKYFNLASQGGHI 476
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
A Y LA G GV + A + E G
Sbjct: 477 LAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 510
>gi|374573473|ref|ZP_09646569.1| TPR repeat-containing protein [Bradyrhizobium sp. WSM471]
gi|374421794|gb|EHR01327.1| TPR repeat-containing protein [Bradyrhizobium sp. WSM471]
Length = 679
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
A+ ++A L +A+ AGH AQ+QL + G GV+ NLQ WY AA+ G+ +N
Sbjct: 538 ADPKQAALWLEKAARAGHAVAQFQLGVMFCTGNGVELNLQRGLSWYEAAAKQGHALGQFN 597
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 293
++ S G+G + +A +W +RAA+ G AQL + G A ELA R
Sbjct: 598 LAVMLSKGQGCERNAEKAVEWFERAAEQGMPAAQLALA-DAYAAGS--GAPTNAELAVRW 654
Query: 294 GETAADHVKNVILQQLSATSR 314
E +A + Q+L+A +R
Sbjct: 655 YEKSAQQGNELARQRLAALNR 675
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 111 FKH--GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAA 164
F H G+G+ ++ +A F K A +A+ G+M D +E A +L R++A
Sbjct: 242 FMHLKGKGLPEDHAEAARLFAKAAEHEDAVALYHIGIMRLNGDGVERDRERAETLLRKSA 301
Query: 165 ---------VLGDPAAQPANAE----EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
LG+ A A AE EA +A+ G V+AQ+ G G N
Sbjct: 302 RKDYLPAILALGEFYALGAGAEPDLREAAYWYQKAAERGDVQAQFFTGRFFATGDGAPPN 361
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
L+EAA+W+LRAAE + A +N + + G GL A KW + AA+ G A+++ G
Sbjct: 362 LREAAKWFLRAAENKHPTAAFNIATFLANGTGLEKDIPAAIKWFEVAAEGGLSAAKIQLG 421
Query: 272 LGLFTEG----EMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
L G + +A +LE A AG+ A K Q L T ++R++
Sbjct: 422 R-LHAAGGGGTDQAQAKQWLEQAANAGDPEA---KVAYAQFLLQTDKERSL 468
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMV-----------------DAGLMYWEMDKKEA 155
GRG+ +N + A + + + A + A V +A ++ + + E
Sbjct: 210 QGRGLPENFELAAEWYRRAADQDYVRAAVALAFMHLKGKGLPEDHAEAARLFAKAAEHED 269
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A++LY + + + E A LL +++ ++ A L G G + +L+EA
Sbjct: 270 AVALYHIGIMRLNGDGVERDRERAETLLRKSARKDYLPAILALGEFYALGAGAEPDLREA 329
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LE 269
A WY +AAE G V+A + T ++ G+G P + R+A KW RAA+ H A L
Sbjct: 330 AYWYQKAAERGDVQAQFFTGRFFATGDGAPPNLREAAKWFLRAAENKHPTAAFNIATFLA 389
Query: 270 HGLGLFTEGEMMKAVVYLELATRAGETAA 298
+G GL E ++ A+ + E+A G +AA
Sbjct: 390 NGTGL--EKDIPAAIKWFEVAAEGGLSAA 416
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
RA +L+ KS P +L G+ + G G +L +A + K A RG A
Sbjct: 292 RAETLLRKSARKDYLP-----AILALGEFYALGAGAEPDLREAAYWYQKAAERGDVQAQF 346
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
G + GD A P N EA K +A+ H A + +A
Sbjct: 347 FTGRFF-----------------ATGDGA--PPNLREAAKWFLRAAENKHPTAAFNIATF 387
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
L G G++ ++ A +W+ AAEGG A ++ G G QA++W+++AA+
Sbjct: 388 LANGTGLEKDIPAAIKWFEVAAEGGLSAAKIQLGRLHAAGGG-GTDQAQAKQWLEQAANA 446
Query: 262 GHGKAQLEH 270
G +A++ +
Sbjct: 447 GDPEAKVAY 455
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
AS GH A +++AL +G GV ++ EA W+ RAA+ G++ A Y +L Y G
Sbjct: 48 ASKLGHAEADHRIALLYEKGEGVRGSIAEAVAWHERAAQAGHLEAQYKLALIYRHGVQAG 107
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVK 302
L A W + + + KA H L +F G + E A R ++AAD K
Sbjct: 108 LGPGSAETWRRSSEERLGEKASSLHAL-IFPHGTAV--AKNSEAAFRWAKSAADAGK 161
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ---------------- 185
DAG+ +E + A +R A+ LG A A+ + LLY+
Sbjct: 27 DAGVAAYEAQRFLDAFHAWRDASKLGH-----AEADHRIALLYEKGEGVRGSIAEAVAWH 81
Query: 186 --ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
A+ AGH+ AQY+LAL G A W + E +A +L + G
Sbjct: 82 ERAAQAGHLEAQYKLALIYRHGVQAGLGPGSAETWRRSSEERLGEKASSLHALIFPHGTA 141
Query: 244 LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ + A +W K AAD G +AQ+ G L+T GE
Sbjct: 142 VAKNSEAAFRWAKSAADAGKAEAQVLLG-DLYTNGE 176
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE----AAISLYRQAA-- 164
F HG V KN + A A G A V G +Y + E AA+ Y AA
Sbjct: 136 FPHGTAVAKNSEAAFRWAKSAADAGKAEAQVLLGDLYTNGEGCERDLKAALKSYMAAAKQ 195
Query: 165 -------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
LGD Q P N E A + +A+ +VRA LA +G+G+ +
Sbjct: 196 DFAAGQFALGDVCFQGRGLPENFELAAEWYRRAADQDYVRAAVALAFMHLKGKGLPEDHA 255
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-- 271
EAAR + +AAE A+Y+ + G+G+ +A ++++A + A L G
Sbjct: 256 EAARLFAKAAEHEDAVALYHIGIMRLNGDGVERDRERAETLLRKSARKDYLPAILALGEF 315
Query: 272 --LGLFTEGEMMKAVVYLELATRAGETAA 298
LG E ++ +A + + A G+ A
Sbjct: 316 YALGAGAEPDLREAAYWYQKAAERGDVQA 344
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 90 SWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-- 147
+W DA + L A R ++ G GVR ++ +A+ + A G A L+Y
Sbjct: 44 AWRDASK-LGHAEADHRIALLYEKGEGVRGSIAEAVAWHERAAQAGHLEAQYKLALIYRH 102
Query: 148 -------------WEMDKKE----AAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAG 190
W +E A SL+ A + A N+E A + A+ AG
Sbjct: 103 GVQAGLGPGSAETWRRSSEERLGEKASSLH--ALIFPHGTAVAKNSEAAFRWAKSAADAG 160
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS-LCYSFGEGLPLSHR 249
AQ L G G + +L+ A + Y+ AA+ + + +C+ G GLP +
Sbjct: 161 KAEAQVLLGDLYTNGEGCERDLKAALKSYMAAAKQDFAAGQFALGDVCFQ-GRGLPENFE 219
Query: 250 QARKWMKRAAD 260
A +W +RAAD
Sbjct: 220 LAAEWYRRAAD 230
>gi|195054669|ref|XP_001994247.1| GH11624 [Drosophila grimshawi]
gi|193896117|gb|EDV94983.1| GH11624 [Drosophila grimshawi]
Length = 821
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ ++++ KAL+ F A G+ + G +Y E ++ E A + +A+
Sbjct: 344 YQGGKAIQQDHQKALEYFTLAANAGNAIGFAFLGKLYLEGSEQIKADNETAFKYFSKASE 403
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+GDP Q P ++ +A+ QA+ G V Q QL G GV +
Sbjct: 404 MGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGTMYFTGNGVKTDY 463
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ A +++ A + G+V A YN + +++G G+ S A ++ K A+ G +L H
Sbjct: 464 KLALKYFNLATQSGHVLAYYNLGVMHAYGMGMLRSCPAAVEFFKNVAERGRWSNRLMH 521
>gi|419793622|ref|ZP_14319240.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392616548|gb|EIW98980.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS L+ G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLSYFIIGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++L +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALELYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L G+ V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LEL
Sbjct: 90 YFIIGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEL 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLK--------GAARG---STLAMVDAGLMYWE-----MD 151
G + +G G +N AL+ + K G RG ++ A G+MY D
Sbjct: 130 GDAYMYGDGFPQNTQLALELYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQD 189
Query: 152 KKEAAISLYRQAAVLGDPA------------AQPANAEEAVKLLYQASIAGHVRAQYQLA 199
++ AI + + A + DPA P + +AV L + + L
Sbjct: 190 YQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLN 249
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ D + WY + A+ + YN + Y G L H A +W +RAA
Sbjct: 250 ALYDKAHPAD--QVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAA 307
Query: 260 DCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G +AQ G+ +F +GE + +A+ + A R G AA
Sbjct: 308 AQGLAEAQDAIGV-MFMQGEAVSQDYQQALAWYRKAARQGLPAA 350
>gi|146338746|ref|YP_001203794.1| hypothetical protein BRADO1680 [Bradyrhizobium sp. ORS 278]
gi|146191552|emb|CAL75557.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp.
ORS 278]
Length = 438
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 175 NAEEAVKL--LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N + AV L L ++ G RAQ+ + G GV N EA WY +AA+ G A +
Sbjct: 33 NGQPAVALRRLQPLAVKGDARAQFDVGFMQAFGVGVARNQTEALVWYRKAADQGLAIAQH 92
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLE 288
+ Y GEG H +A +W RAA G ++Q GL G ++++ +L
Sbjct: 93 YLGIAYFNGEGAARDHGEAARWFNRAAAQGFAQSQYMLGLMMLDGRVMSQDVVQGYAWLV 152
Query: 289 LATRAG-ETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
+A R G +A ++ + +LS R +A ++ +WR P
Sbjct: 153 MAGRNGVRSAGREIQRI---KLSDAQRRQAEQIIAAWRPKP 190
>gi|399910565|ref|ZP_10778879.1| Putative TPR repeat protein [Halomonas sp. KM-1]
Length = 296
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
EA LL G + G+GV ++ +A + + + A G+ +A + MY E D +E
Sbjct: 57 EAQSLL--GGMYLRGQGVTQDFLQAAEWYRRSAELGNPIAQNNLAWMYEVGRGVEQDYQE 114
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A + YR +A G AQ N EA K ++ G ++Q L
Sbjct: 115 A-MKWYRLSAEEGMAGAQQNLGLMFFYGRGSSVNYSEAAKWFRLSAGQGLAKSQEYLGNM 173
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
+ G GV + +E+ARW+ AAE G V + Y + + GEG+P A +W +AA+
Sbjct: 174 YYYGAGVSADYEESARWFRLAAEQGEVTSQYQLGVLHMNGEGVPQDDVIAAEWFYKAAEQ 233
Query: 262 GHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
G AQ E+G G+ E +AV + +A + G A V L +L+ + +
Sbjct: 234 GDDHAQYNLGAMYENGWGVSQNYE--EAVKWYAMAAQQGLKEAQEV----LLELAESGVE 287
Query: 316 RAMLVVDS 323
A+++V++
Sbjct: 288 AAVVIVNA 295
>gi|168462767|ref|ZP_02696698.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418760455|ref|ZP_13316610.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765884|ref|ZP_13321965.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418770141|ref|ZP_13326165.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777363|ref|ZP_13333292.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779045|ref|ZP_13334952.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785833|ref|ZP_13341659.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418801372|ref|ZP_13357008.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419788234|ref|ZP_14313925.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|195634437|gb|EDX52789.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392617748|gb|EIX00163.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392737937|gb|EIZ95088.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392739637|gb|EIZ96770.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392742760|gb|EIZ99844.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392743822|gb|EJA00884.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392750705|gb|EJA07665.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392754495|gb|EJA11412.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392780336|gb|EJA36991.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 28/178 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + G+ V+ + A+ K +GS L+ G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLSYFIIGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L G+ V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGQYVKPDYKLAIKWLEKAGKQGSDLS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFIIGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLK--------GAARG---STLAMVDAGLMYWE-----MD 151
G + +G G +N AL+ + K G RG ++ A G+MY D
Sbjct: 130 GDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQD 189
Query: 152 KKEAAISLYRQAAVLGDPA------------AQPANAEEAVKLLYQASIAGHVRAQYQLA 199
++ AI + + A + DPA P + +AV L + + L
Sbjct: 190 YQQTAILMRKAAENMYDPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIPLN 249
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ D + WY + A+ + YN + Y G L H A +W +RAA
Sbjct: 250 ALYDKAHPAD--QVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAA 307
Query: 260 DCGHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAA 298
G +AQ G+ +F +GE + +A+ + A R G AA
Sbjct: 308 AQGLAEAQDAIGV-MFMQGEAVSQDYQQALAWYRKAARQGLPAA 350
>gi|302878679|ref|YP_003847243.1| Sel1 domain-containing protein repeat-containing protein
[Gallionella capsiferriformans ES-2]
gi|302581468|gb|ADL55479.1| Sel1 domain protein repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 406
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY---WEMDKKEA-AISLYRQAAVLGDPAAQ------- 172
AL F A +GS A G+MY + ++K + AI YRQAA G+ AQ
Sbjct: 36 ALQEFKPLAEQGSADAQNALGVMYEKGFGVEKNDGQAIRWYRQAAEQGNENAQFNLGVLF 95
Query: 173 --PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ EAV+ +A+ G+ Q +L G+GV + +A +W+ +AAE G A
Sbjct: 96 DNRQDYTEAVRWYRKAAEQGNKSGQARLGSLYVLGQGVAADKVQAIQWFRKAAEQGQAGA 155
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
Y YS G GL QA W ++A + GH AQ G+ GL ++ KA+
Sbjct: 156 QYFLGFAYSGGYGLSKDEVQAVYWYRKAVEQGHADAQFNLGVMYASGLGVTKDLEKAMQL 215
Query: 287 LELATRAGETAADH 300
L+ + G A +
Sbjct: 216 YALSAKQGNEPAKN 229
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 86 LVCKSWNDALRPLREAMVLLRWGK---------RFKHGRGVRKNLDKALDSFLKGAARGS 136
L + ND L L+E L G ++ G GV KN +A+ + + A +G+
Sbjct: 25 LTAYNKNDYLSALQEFKPLAEQGSADAQNALGVMYEKGFGVEKNDGQAIRWYRQAAEQGN 84
Query: 137 TLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP-------------ANAEEAVKLL 183
A + G+++ A+ YR+AA G+ + Q A+ +A++
Sbjct: 85 ENAQFNLGVLFDNRQDYTEAVRWYRKAAEQGNKSGQARLGSLYVLGQGVAADKVQAIQWF 144
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ G AQY L G G+ + +A WY +A E G+ A +N + Y+ G G
Sbjct: 145 RKAAEQGQAGAQYFLGFAYSGGYGLSKDEVQAVYWYRKAVEQGHADAQFNLGVMYASGLG 204
Query: 244 LPLSHRQARKWMKRAADCGH 263
+ +A + +A G+
Sbjct: 205 VTKDLEKAMQLYALSAKQGN 224
>gi|375136622|ref|YP_004997272.1| Sel1-like repeat protein [Acinetobacter calcoaceticus PHEA-2]
gi|325124067|gb|ADY83590.1| Sel1-like repeat protein [Acinetobacter calcoaceticus PHEA-2]
Length = 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K+ +A D F K AA+ A + G++Y D+ E Y +A
Sbjct: 111 GMMYYTGTGVEKDAKRAFDYFTKAAAKDHAKAQYNLGVLY---DRGEGTAQDYGKA---- 163
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 164 ------------FEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSDEQALKWYTKAAEHNE 211
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A YN + Y GEG P + + A+KW ++AAD G
Sbjct: 212 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAG 246
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY Y V D
Sbjct: 82 QGVVKNYEQAFKWLTVADQNGSMGAKYSLGMMY------------YTGTGVEKD------ 123
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
A+ A +A+ H +AQY L + RG G + +A W+ RAA+ GY A YN
Sbjct: 124 -AKRAFDYFTKAAAKDHAKAQYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNL 182
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLELATRA 293
+ Y G G+ S QA KW +AA+ H ++ ++ L ++ GE L+LA +
Sbjct: 183 AHLYKKGHGVSQSDEQALKWYTKAAE--HNESDAQYNLAQMYLNGEGTPKN--LQLAKKW 238
Query: 294 GETAAD 299
+ AAD
Sbjct: 239 FQQAAD 244
>gi|421899540|ref|ZP_16329903.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206590746|emb|CAQ56358.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 252
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
A D F + A RG+ LA D +M L R + P E A+K L
Sbjct: 64 AFDEFAEAAQRGNRLAQFDYAMM------------LMRGEGTVAQP-------EAAIKWL 104
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ AQ+ RG V +L EA +WY RAA GG++ A + Y G G
Sbjct: 105 RRAADNQMTHAQFVYGELFERGELVPRSLPEANKWYERAATGGHIEAQRALATNYFTGRG 164
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+P + +A W K+AA+ G G +Q
Sbjct: 165 VPRDYGRAFIWYKKAAEGGDGPSQ 188
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 70 EAAQRGNRLAQFDYAMMLMRGEGTVAQPEAAIKWLRRAADNQMTHAQFVYGELFERGELV 129
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
P S +A KW +RAA GH +AQ FT
Sbjct: 130 PRSLPEANKWYERAATGGHIEAQRALATNYFT 161
>gi|157119150|ref|XP_001659361.1| hypothetical protein AaeL_AAEL008521 [Aedes aegypti]
gi|108875461|gb|EAT39686.1| AAEL008521-PA [Aedes aegypti]
Length = 790
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG+ + KAL F + A G+ +AM G +Y E + A +++AA
Sbjct: 360 YQGGRGISLDHQKALQYFSQAANAGNAVAMAYLGKIYLEGSDNIKADNDTAFKYFKKAAD 419
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG+P Q P + +A+K QA+ G V Q QL G GV +
Sbjct: 420 LGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDGQLQLGNMYFSGIGVKRDF 479
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ A +++ A++ G+V A YN ++ G G+ S A + K A+ G
Sbjct: 480 KMANKYFNLASQSGHVLAFYNLGQMHAVGLGMMRSCPTAVELFKNVAERG 529
>gi|83954939|ref|ZP_00963617.1| Sel1-like repeat protein [Sulfitobacter sp. NAS-14.1]
gi|83840665|gb|EAP79837.1| Sel1-like repeat protein [Sulfitobacter sp. NAS-14.1]
Length = 402
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQ 162
G ++ G+GV + A D F + AA+G A G M+ E+ + A A + YR+
Sbjct: 80 GVSYRFGQGVDPDAKTAFDYFTRAAAQGFDKAQFSLGNMH-ELGEGTAQSDAEARAWYRK 138
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA G+ Q A EEA +LL ++ G AQY L + G GV
Sbjct: 139 AAEQGNAMGQYRLGILLLEGRGGEAAPEEAQQLLRASAEQGLADAQYSLGWMANHGVGVK 198
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ +A WY AAE GY A N Y+ G G +A W AA G AQ+
Sbjct: 199 QDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGTSQDDEKAVGWYYEAARHGVPAAQVN 258
Query: 270 HG----LGLFTEGEMMKAVVYLELATRAGETAA 298
G LG + + +A+V+ + A GE A
Sbjct: 259 MGKHYALGRGVQQDFDEAMVWYQQAAEYGEPVA 291
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 34/191 (17%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---- 149
A + L +A L W HG GV+++ +AL+ + A +G A ++ G +Y E
Sbjct: 176 AEQGLADAQYSLGW--MANHGVGVKQDHGQALEWYRLAAEQGYAPAQINLGNLYAEGLGT 233
Query: 150 MDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
E A+ Y +AA G PAAQ ++ H Y L GRGV
Sbjct: 234 SQDDEKAVGWYYEAARHGVPAAQ-------------VNMGKH----YAL------GRGVQ 270
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK--AQ 267
+ EA WY +AAE G A N L Y G+G P +A +W + AA+ G + A+
Sbjct: 271 QDFDEAMVWYQQAAEYGEPVAYLNVGLLYENGQGRPADPAEAARWYRAAAERGEPRSLAK 330
Query: 268 LEHGLGLFTEG 278
L H + EG
Sbjct: 331 LAH---FYAEG 338
>gi|71064949|ref|YP_263676.1| hypothetical protein Psyc_0373 [Psychrobacter arcticus 273-4]
gi|71037934|gb|AAZ18242.1| hypothetical protein Psyc_0373 [Psychrobacter arcticus 273-4]
Length = 193
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ LA L +G G+ N Q+A +WY +AA+ G A N ++ Y GEG+ + +
Sbjct: 49 GNDHAQFYLAKRLQKGEGIAKNTQQAVQWYTKAAQQGVAPAQLNLAIMYLRGEGVQPNLQ 108
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE--MMKAVVYLELATRAG 294
QAR W+++AA G +A + L L E + ++ A + +LA R G
Sbjct: 109 QARGWLEKAAMRGDNRA--SYTLALLDEKQKNLVDAYKWYDLAARDG 153
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 23/120 (19%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
KR + G G+ KN +A+ + K A +G A ++ +MY L
Sbjct: 59 KRLQKGEGIAKNTQQAVQWYTKAAQQGVAPAQLNLAIMY------------------LRG 100
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
QP N ++A L +A++ G RA Y LAL + + NL +A +WY AA G +
Sbjct: 101 EGVQP-NLQQARGWLEKAAMRGDNRASYTLALLDEKQK----NLVDAYKWYDLAARDGML 155
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N ++AV+ +A+ G AQ LA+ RG GV NLQ+A W +AA G RA Y
Sbjct: 70 NTQQAVQWYTKAAQQGVAPAQLNLAIMYLRGEGVQPNLQQARGWLEKAAMRGDNRASYTL 129
Query: 235 SL 236
+L
Sbjct: 130 AL 131
>gi|419739872|ref|ZP_14266613.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381297437|gb|EIC38528.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 277 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 336
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 337 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 396
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 397 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 453
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 59 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 118
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 119 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 178
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 179 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 237
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 307 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 366
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 367 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 397
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 31 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 90
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 91 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 150
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 151 YRKAASPTND--AGVVRGQGSASS 172
>gi|344924624|ref|ZP_08778085.1| Sel1 domain-containing protein [Candidatus Odyssella
thessalonicensis L13]
Length = 413
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+A +A++ +AS+ GH AQY LA G GV+ N ++A RWY AA GY A Y
Sbjct: 2 DAHKAMQWYKKASVQGHKFAQYNLACNYRMGIGVEANQEQAVRWYHFAAIQGYAPAQYEI 61
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
Y G L +++AR+W ++AA+ H A + G L+ G+ ++A
Sbjct: 62 GCAYQTGLCLKKDNKKAREWFQQAAEQNHAGALYKLGC-LYENGDGVQA 109
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y++A+V G AQ AN E+AV+ + A+I G+ AQY++
Sbjct: 6 AMQWYKKASVQGHKFAQYNLACNYRMGIGVEANQEQAVRWYHFAAIQGYAPAQYEIGCAY 65
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G + + ++A W+ +AAE + A+Y Y G+G+ QA + RAA
Sbjct: 66 QTGLCLKKDNKKAREWFQQAAEQNHAGALYKLGCLYENGDGVQADSVQAISYFLRAARLQ 125
Query: 263 HG 264
G
Sbjct: 126 QG 127
>gi|427764964|ref|ZP_18966556.1| hypothetical protein B581_10537, partial [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|414065436|gb|EKT46181.1| hypothetical protein B581_10537, partial [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
Length = 431
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 198 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 257
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 258 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 317
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 318 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 374
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 153 KEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-- 193
++ A+ YR+AA LGD + Q P N + A++ +A+ AG VR
Sbjct: 29 RQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQ 88
Query: 194 -----AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AQ++L + G+GV + Q+ A +AAE Y A + Y +GEG+P +
Sbjct: 89 GSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDY 148
Query: 249 RQARKWMK 256
RQA W+
Sbjct: 149 RQAVYWLN 156
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 228 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 287
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 288 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 318
>gi|238913659|ref|ZP_04657496.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|340726986|ref|XP_003401832.1| PREDICTED: protein sel-1 homolog 1-like [Bombus terrestris]
Length = 741
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAV 165
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 354 YQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAAE 413
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG+P Q + +A++ QA+ G V Q QL G GV +
Sbjct: 414 LGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRDY 473
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 474 KLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMVAH 533
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 312
+ EG + +A V L G A IL + T
Sbjct: 534 TDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDKGETT 573
>gi|328793806|ref|XP_392802.4| PREDICTED: protein sel-1 homolog 1-like [Apis mellifera]
Length = 741
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 353 HYQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAA 412
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
LG+P Q + +A++ QA+ G V Q QL G GV +
Sbjct: 413 ELGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRD 472
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 473 YKLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMIA 532
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 312
+ EG + +A V L G A IL + T
Sbjct: 533 HTDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDKGETT 573
>gi|197362243|ref|YP_002141880.1| hypothetical protein SSPA1039 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197093720|emb|CAR59193.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 491
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRDVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 217
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 12 PADSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 71
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 72 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 131
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 132 YRKAASPTND--AGVVRGQGSASS 153
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG +
Sbjct: 288 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRDVA 347
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 348 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 378
>gi|154251244|ref|YP_001412068.1| Sel1 domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154155194|gb|ABS62411.1| Sel1 domain protein repeat-containing protein [Parvibaculum
lavamentivorans DS-1]
Length = 234
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 197 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+AL L RG GV + + A +Y RAA+GG A NT+ Y GEG+P +++A W
Sbjct: 85 NVALLLRRGDGVARDPERALYFYERAAQGGLTSAQVNTAFMYLGGEGIPQDYKKASFWFH 144
Query: 257 RAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAG-ETAADHVKNVI 305
AA G A+ G+ GL E + +A+ + LA RAG E A D + ++
Sbjct: 145 TAAIAGVPVARYNLGVLYERGLGVEADQARALAWYALAARAGHEKALDRLTQLV 198
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 25/140 (17%)
Query: 92 NDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
D L +R +LLR G GV ++ ++AL + + A G T A V+ MY
Sbjct: 77 TDDLAAMRNVALLLR------RGDGVARDPERALYFYERAAQGGLTSAQVNTAFMY---- 126
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
LG P + ++A + A+IAG A+Y L + RG GV+ +
Sbjct: 127 --------------LGG-EGIPQDYKKASFWFHTAAIAGVPVARYNLGVLYERGLGVEAD 171
Query: 212 LQEAARWYLRAAEGGYVRAM 231
A WY AA G+ +A+
Sbjct: 172 QARALAWYALAARAGHEKAL 191
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+ E A+ +A+ G AQ A G G+ + ++A+ W+ AA G A YN
Sbjct: 99 DPERALYFYERAAQGGLTSAQVNTAFMYLGGEGIPQDYKKASFWFHTAAIAGVPVARYNL 158
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+ Y G G+ +A W AA GH KA
Sbjct: 159 GVLYERGLGVEADQARALAWYALAARAGHEKA 190
>gi|157106426|ref|XP_001649316.1| hypothetical protein AaeL_AAEL004514 [Aedes aegypti]
gi|108879836|gb|EAT44061.1| AAEL004514-PA [Aedes aegypti]
Length = 790
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG+ + KAL F + A G+ +AM G +Y E + A +++AA
Sbjct: 360 YQGGRGISLDHQKALQYFSQAANAGNAVAMAYLGKIYLEGSDNIKADNDTAFKYFKKAAD 419
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG+P Q P + +A+K QA+ G V Q QL G GV +
Sbjct: 420 LGNPVGQSGLGVMYLHGKGVPKDTVKALKFFTQAADQGWVDGQLQLGNMYFSGIGVKRDF 479
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ A +++ A++ G+V A YN ++ G G+ S A + K A+ G
Sbjct: 480 KMANKYFNLASQSGHVLAFYNLGQMHAVGLGMMRSCPTAVELFKNVAERG 529
>gi|347539542|ref|YP_004846967.1| Sel1 domain containing protein repeat-containing protein
[Pseudogulbenkiania sp. NH8B]
gi|345642720|dbj|BAK76553.1| Sel1 domain protein repeat-containing protein [Pseudogulbenkiania
sp. NH8B]
Length = 210
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ HG+GV N DK+L+ K A G + A GL+Y D G P
Sbjct: 61 YWHGQGVSANRDKSLELLRKSAGHGLSRAQYAMGLLYENGD---------------GVPR 105
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+QP EA + A+ G+ AQ L + GRGV + +AA+WY AAE G V A
Sbjct: 106 SQP----EATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQDYLQAAKWYKAAAEQGDVGA 161
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
Y + Y G+G+ + R+A +W AA G A L+
Sbjct: 162 QYLLASLYEHGDGVAQNLREAIRWYVAAARQGDVAASLK 200
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
F +GA G +A + +MYW AN +++++LL +++
Sbjct: 42 FEEGARAGEPVAEFNLAMMYWHGQ-------------------GVSANRDKSLELLRKSA 82
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G RAQY + L G GV + EA RW+ AA GY A + Y G G+
Sbjct: 83 GHGLSRAQYAMGLLYENGDGVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQD 142
Query: 248 HRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+ QA KW K AA+ G AQ EHG G+ + +A+ + A R G+ AA
Sbjct: 143 YLQAAKWYKAAAEQGDVGAQYLLASLYEHGDGVAQ--NLREAIRWYVAAARQGDVAA 197
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A+ G + Q + A KL + + AG A++ LA+ G+GV N ++ ++A
Sbjct: 23 AIPGWSSYQGGDYSTARKLFEEGARAGEPVAEFNLAMMYWHGQGVSANRDKSLELLRKSA 82
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGE 279
G RA Y L Y G+G+P S +A +W AA G+ AQ+ G LG +
Sbjct: 83 GHGLSRAQYAMGLLYENGDGVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQD 142
Query: 280 MMKAVVYLELATRAGETAADHV 301
++A + + A G+ A ++
Sbjct: 143 YLQAAKWYKAAAEQGDVGAQYL 164
>gi|224825307|ref|ZP_03698412.1| Sel1 domain protein repeat-containing protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602228|gb|EEG08406.1| Sel1 domain protein repeat-containing protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 210
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ HG+GV N DK+L+ K A G + A GL+Y D G P
Sbjct: 61 YWHGQGVSANRDKSLELLRKSAGHGLSRAQYAMGLLYENGD---------------GVPR 105
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+QP EA + A+ G+ AQ L + GRGV + +AA+WY AAE G V A
Sbjct: 106 SQP----EATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQDYLQAAKWYKAAAEQGDVGA 161
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
Y + Y G+G+ + R+A +W AA G A L+
Sbjct: 162 QYLLASLYEHGDGVAQNLREAIRWYVAAARQGDVAASLK 200
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
F +GA G +A + +MYW AN +++++LL +++
Sbjct: 42 FEEGARAGEPVAEFNLAMMYWHGQ-------------------GVSANRDKSLELLRKSA 82
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
G RAQY + L G GV + EA RW+ AA GY A + Y G G+
Sbjct: 83 GHGLSRAQYAMGLLYENGDGVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQD 142
Query: 248 HRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
+ QA KW K AA+ G AQ EHG G+ + +A+ + A R G+ AA
Sbjct: 143 YLQAAKWYKAAAEQGDVGAQYLLASLYEHGDGVAQ--NLREAIRWYVAAARQGDVAA 197
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
A+ G + Q + A KL + + AG A++ LA+ G+GV N ++ ++A
Sbjct: 23 AIPGWSSYQGGDYSTARKLFEEGARAGEPVAEFNLAMMYWHGQGVSANRDKSLELLRKSA 82
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGE 279
G RA Y L Y G+G+P S +A +W AA G+ AQ+ G LG +
Sbjct: 83 GHGLSRAQYAMGLLYENGDGVPRSQPEATRWFDLAARQGYRDAQVSLGTQYYLGRGVMQD 142
Query: 280 MMKAVVYLELATRAGETAADHV 301
++A + + A G+ A ++
Sbjct: 143 YLQAAKWYKAAAEQGDVGAQYL 164
>gi|189502614|ref|YP_001958331.1| hypothetical protein Aasi_1288 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498055|gb|ACE06602.1| hypothetical protein Aasi_1288 [Candidatus Amoebophilus asiaticus
5a2]
Length = 731
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + + V ++ KA++S K A +G+ +A + G MY + +E
Sbjct: 545 GIMYLNDESVERDDQKAVESLKKEAEQGNAVAQRNLGFMY--QNGREGL----------- 591
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + A++ +++ G+V Q LA + +G N EA +WY +AA+ G+
Sbjct: 592 -----PQDNRLAIEWFIKSAEQGYVYGQTNLAWMYYNSKGTARNYHEAFKWYQKAADQGH 646
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A Y G+G+ H +A +W ++AA+ GH KAQ + G
Sbjct: 647 PNAQCRLGWMYQNGKGVRKDHTKAFEWYEKAAEQGHEKAQFDLG 690
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---WEM-DKKEAAISLYR 161
R G +++G+GVRK+ KA + + K A +G A D G +Y W + + A+ YR
Sbjct: 652 RLGWMYQNGKGVRKDHTKAFEWYEKAAEQGHEKAQFDLGEIYQYGWGVAENYNKALEWYR 711
Query: 162 QAAVLGDPAA 171
+AA GD AA
Sbjct: 712 KAAENGDQAA 721
>gi|445422209|ref|ZP_21436364.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
gi|444756879|gb|ELW81417.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
Length = 478
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 155 AAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
AA++L + A A AV+LL A++AGHV AQY LA CL G G + NL +
Sbjct: 264 AAVNLLKNAENAKTEQKHQEYATLAVELLSHAAVAGHVPAQYSLAQCLRYGLGTEKNLDQ 323
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
W RAA + A + S+ LPL H + AAD GH +A L
Sbjct: 324 GVSWLERAAMQNHPDAQFELSML------LPLEHEHHLPLLNAAADKGHTQAML 371
>gi|417341480|ref|ZP_12122523.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|357957836|gb|EHJ82717.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 521
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + AA+G A G+M+ + + + A
Sbjct: 288 AKVQYNFGVWYYNGYHLLKDHNLALEWYRSAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 347
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 348 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 407
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 408 TGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMAS 464
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARG--STLAMVDAGLMYWE--MDKKEAAISLYRQA 163
G + +G + KAL+ + K A G ST ++ MY + + A+ YR+A
Sbjct: 94 GYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKA 153
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVR-------AQYQLALCLHRGRGVDFNLQEAA 216
A P N V L AG VR AQ++L + G+GV + Q+ A
Sbjct: 154 A-------SPTNDAGVVPPLQPMMRAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTA 206
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+AAE Y A + Y +GEG+P +RQA W+
Sbjct: 207 ILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 248
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 318 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 377
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 378 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 408
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y++GE PLS ++A +W ++AA+ G Q
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQ 126
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQ-YQLALCLHR-------GRGVDFNLQEA 215
A LGD + Q ++L A + G Q QLAL +R GV LQ
Sbjct: 118 AELGDSSTQ--------EILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVPPLQPM 169
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
R + +G A + + Y+ G+G+P ++Q M++AA+ + AQL G+ F
Sbjct: 170 MRAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYF 229
>gi|378699636|ref|YP_005181593.1| hypothetical protein SL1344_1688 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|301158284|emb|CBW17783.1| hypothetical secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
Length = 491
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 218
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 288 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 347
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 348 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 378
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 12 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 71
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 72 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 131
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 132 YRKAASPTND--AGVVRGQGSASS 153
>gi|378445167|ref|YP_005232799.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|261246946|emb|CBG24763.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 491
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 434
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 218
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G V AQ+ L GR V + + A +W +A + G +
Sbjct: 12 PADSEECQYVQELEQKAEQGDVSAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 71
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 72 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 131
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 132 YRKAASPTND--AGVVRGQGSASS 153
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 288 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 347
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 348 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 378
>gi|196228876|ref|ZP_03127742.1| Sel1 domain protein repeat-containing protein [Chthoniobacter
flavus Ellin428]
gi|196227157|gb|EDY21661.1| Sel1 domain protein repeat-containing protein [Chthoniobacter
flavus Ellin428]
Length = 645
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 19/188 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV+K+L KA++ + + A G A + GLMY E L
Sbjct: 82 YYQGYGVKKDLAKAVELYQQAAKAGHAGAQNNLGLMY------EYGTGL----------- 124
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P + +A +L A+ A+Y L + +G V + EA WY +AA G+ A
Sbjct: 125 --PVDHAKAHELYVAAAKQKLRDAEYNLGVEYDQGISVPQSWTEARSWYEKAAAQGHTAA 182
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELA 290
+ N Y G G+P++ A+K+++ AD G+ AQ F + + YL A
Sbjct: 183 LTNLGNLYLNGHGVPVNLETAKKYLQTPADVGNPTAQYNLATCYFLQHNATEGTTYLRRA 242
Query: 291 TRAGETAA 298
G + A
Sbjct: 243 AEGGSSNA 250
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L + + AG+V+AQ L LC ++G GV +L +A Y +AA+ G+ A N L Y +G
Sbjct: 63 LEKDAAAGNVKAQATLGLCYYQGYGVKKDLAKAVELYQQAAKAGHAGAQNNLGLMYEYGT 122
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQ----LEHGLGLFTEGEMMKAVVYLELATRAGETAA 298
GLP+ H +A + AA A+ +E+ G+ +A + E A G TAA
Sbjct: 123 GLPVDHAKAHELYVAAAKQKLRDAEYNLGVEYDQGISVPQSWTEARSWYEKAAAQGHTAA 182
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ ++ L LC G GV + +W+ AA VRA + Y G +P ++
Sbjct: 324 GYPDGEFALGLCYVNGTGVASDRAAGFKWFQAAAAQKQVRAAAMLAYFYEDGGTVPRDYK 383
Query: 250 QARKWMKRAADCGHGKAQLEHG 271
+A KW++ AA+ G +AQ G
Sbjct: 384 EAVKWLRIAAEGGEHQAQFHLG 405
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 155 AAISLYRQAAVLG----DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
AA R AA+L D P + +EAVK L A+ G +AQ+ L C G GVD
Sbjct: 357 AAQKQVRAAAMLAYFYEDGGTVPRDYKEAVKWLRIAAEGGEHQAQFHLGRCYRDGTGVDI 416
Query: 211 NLQEAARWYLRAAEG 225
+ +EA +W+ + +G
Sbjct: 417 DQKEALKWFRLSVQG 431
>gi|237746421|ref|ZP_04576901.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377772|gb|EEO27863.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 300
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAG 190
G+ +E + A+ ++AA GD AQ + + + +A+ AG
Sbjct: 41 GIALYETKNYQDALPYLQKAAEAGDTRAQLYLGNLYREGLGVKKDYAKTIPWFEKAATAG 100
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
+ RAQ L + G GV+ + Q+AA+W+L+AAE + A + Y G G+ S Q
Sbjct: 101 NPRAQTYLGIAYSEGLGVEPDYQKAAQWFLKAAEQNHAPAQTLVGVMYYKGMGVEQSFPQ 160
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEG----EMMKAVVYLELATRAGETAADHVKNVIL 306
A+KW+++AA G AQ GL ++ EG + KAV L A E A + ++
Sbjct: 161 AQKWLEKAAANGEKDAQSFLGL-IYLEGNDHNDPQKAVELLSKAADQDEPLAQTILGIMY 219
Query: 307 QQLSATSRDRA 317
Q +D A
Sbjct: 220 IQGKYVKQDYA 230
>gi|113866119|ref|YP_724608.1| TPR repeat-containing protein [Ralstonia eutropha H16]
gi|113524895|emb|CAJ91240.1| FOG: TPR repeat, SEL1 subfamily [Ralstonia eutropha H16]
Length = 234
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 120 NLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEA 179
N D+AL F A G+ LA + +M L R AA+P +EA
Sbjct: 51 NFDQALRGFADAARLGNRLAQFNYAMM------------LLRGEGT----AARP---QEA 91
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ L +A+ AQY RG V +L+EA RWY AA+GG+V+A + Y
Sbjct: 92 LVWLKKAADNQMTHAQYTWGDLYERGELVPKSLEEANRWYALAAQGGHVQAQMALATNYF 151
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRA 293
G G+P + QA W RAA G G AQ EHG + ++ +A ++ +
Sbjct: 152 TGRGVPRDYGQAFMWYSRAASAGDGGAQYIVGSFYEHGEPGVVDRDLEQAKIWYARSAAH 211
Query: 294 GETAA 298
G+ A
Sbjct: 212 GDPGA 216
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
A + N ++A++ A+ G+ AQ+ A+ L RG G QEA W +AA+
Sbjct: 46 AYEAGNFDQALRGFADAARLGNRLAQFNYAMMLLRGEGTAARPQEALVWLKKAADNQMTH 105
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVV 285
A Y Y GE +P S +A +W AA GH +AQ+ FT + +A +
Sbjct: 106 AQYTWGDLYERGELVPKSLEEANRWYALAAQGGHVQAQMALATNYFTGRGVPRDYGQAFM 165
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMPSLH 331
+ A AG+ A ++ + DR + W A + H
Sbjct: 166 WYSRAASAGDGGAQYIVGSFYEHGEPGVVDRDLEQAKIWYARSAAH 211
>gi|417326034|ref|ZP_12111832.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353574337|gb|EHC37412.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWL 233
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|320163959|gb|EFW40858.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1337
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G+ +K G+GV N+ +AL F A +G A V GLM++ AA+ L++ A
Sbjct: 915 GRMYKDGKGVDHNMSEALRLFQAAAQQGDASAQVCLGLMHYHGQGVPKDIAAAVQLFQVA 974
Query: 164 AVLGDPAAQPANA---EEAVKLLYQASIAGH--VRAQYQLALCLHRGRG-VDFNLQEAAR 217
A A+ P +A E + Q+S H V A++ L G G + + +AA
Sbjct: 975 AACDSDASLPLDAKTLENDAEAASQSSGEQHAVVTARFNLGWAFMNGEGGLPVDKAKAAV 1034
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----G 273
Y AA+ G A N +L G+G+ +QA ++ AA+ G G+AQ L G
Sbjct: 1035 LYRFAADRGLASAQQNLALMLLHGDGVDRDEQQAAHYLALAAESGDGEAQFNLALMYLDG 1094
Query: 274 LFTEGEMMKAVVYLELA 290
+ EG +AV LA
Sbjct: 1095 VGVEGNEKEAVRLFRLA 1111
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS----FG 241
A+ G V AQ+ LA CLH G GV ++ EA WY RAA A +N +L S G
Sbjct: 717 AASCGSVYAQFNLARCLHLGIGVTADVNEAMTWYRRAANQQLATAQFNLALILSAKRHTG 776
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGET 296
P + +A AAD G +A E+G + EG ++ +AV Y +AT G
Sbjct: 777 VTDPGNASEAAALFHAAADQGIPEAMFEYG-NMLQEGRHVPKDLAEAVRYFRVATAQGNA 835
Query: 297 AA 298
A
Sbjct: 836 HA 837
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 150 MDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQY 196
+DK +AA+ LYR AA G +AQ + ++A L A+ +G AQ+
Sbjct: 1027 VDKAKAAV-LYRFAADRGLASAQQNLALMLLHGDGVDRDEQQAAHYLALAAESGDGEAQF 1085
Query: 197 QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
LAL G GV+ N +EA R + AA+ A+ + Y G G+ +A K
Sbjct: 1086 NLALMYLDGVGVEGNEKEAVRLFRLAADKNLPDALVGLASLYIEGRGVEKDETEAAALYK 1145
Query: 257 RAADCGHGKAQLEHGL 272
RAA GHG A+ G+
Sbjct: 1146 RAAQLGHGFARASLGV 1161
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA--- 155
+ +G + GR V K+L +A+ F A+G+ A G + D+ EA
Sbjct: 802 MFEYGNMLQEGRHVPKDLAEAVRYFRVATAQGNAHAQAALGHCFANGTGVVQDEMEAFRL 861
Query: 156 ---------AISLYRQAAV-LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
A +L+ + L A + EA +L +S G+ AQY L G
Sbjct: 862 MRAAAAQNEASALFNLGVMYLRGRAGLAVDRGEAARLFKLSSDRGNPHAQYALGRMYKDG 921
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
+GVD N+ EA R + AA+ G A L + G+G+P A + + AA C
Sbjct: 922 KGVDHNMSEALRLFQAAAQQGDASAQVCLGLMHYHGQGVPKDIAAAVQLFQVAAAC 977
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---M 150
A + L +A+V L + GRGV K+ +A + + A G A G+++ +
Sbjct: 1112 ADKNLPDALVGL--ASLYIEGRGVEKDETEAAALYKRAAQLGHGFARASLGVLHLHGCGV 1169
Query: 151 DKKEA-AISLYRQAAVLG-DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
K E A+ L R AA D Q + EAVK L A+ G+ AQ
Sbjct: 1170 AKNEPEALRLIRAAAEFDHDDHGQFTLGWMYAKGVGVARDEREAVKWLKAAAEQGNGDAQ 1229
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
L G GV N +EAAR Y +AAE G A YN ++ Y G G+ + ++A +
Sbjct: 1230 THLGWMYENGLGVAKNEKEAARLYGQAAERGNADARYNLAVMYERGRGVVKNDKEAIRLY 1289
Query: 256 KRAADCGHGKA 266
+ A+ G A
Sbjct: 1290 ELASAQGRNNA 1300
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR------------WYLRAAEG 225
+A++ A+ H A Y L RG GV + +EA R W+ RAA
Sbjct: 661 DAIRFFSIAAAQSHGPAMYCLGRMHQRGLGVSQDEREAERLYQTARGFGFLEWFRRAASC 720
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
G V A +N + C G G+ +A W +RAA+ AQ L L
Sbjct: 721 GSVYAQFNLARCLHLGIGVTADVNEAMTWYRRAANQQLATAQFNLALIL 769
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 28/233 (12%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGD 168
G GV N +A+ F A + A+V +Y E D+ EAA +LY++AA LG
Sbjct: 1094 GVGVEGNEKEAVRLFRLAADKNLPDALVGLASLYIEGRGVEKDETEAA-ALYKRAAQLGH 1152
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHV-RAQYQLALCLHRGRGVDFNLQE 214
A+ + N EA++L+ A+ H Q+ L +G GV + +E
Sbjct: 1153 GFARASLGVLHLHGCGVAKNEPEALRLIRAAAEFDHDDHGQFTLGWMYAKGVGVARDERE 1212
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------L 268
A +W AAE G A + Y G G+ + ++A + +AA+ G+ A+
Sbjct: 1213 AVKWLKAAAEQGNGDAQTHLGWMYENGLGVAKNEKEAARLYGQAAERGNADARYNLAVMY 1272
Query: 269 EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVV 321
E G G+ + +A+ ELA+ G A + ++L+ + A LV
Sbjct: 1273 ERGRGVVKNDK--EAIRLYELASAQGRNNAATALERLQKKLADANGTAANLVT 1323
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 83/228 (36%), Gaps = 63/228 (27%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
HG GV ++ +A A G A + LMY D
Sbjct: 1057 HGDGVDRDEQQAAHYLALAAESGDGEAQFNLALMYL-------------------DGVGV 1097
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY----- 227
N +EAV+L A+ A LA GRGV+ + EAA Y RAA+ G+
Sbjct: 1098 EGNEKEAVRLFRLAADKNLPDALVGLASLYIEGRGVEKDETEAAALYKRAAQLGHGFARA 1157
Query: 228 ----------------------VRA----------MYNTSLCYSFGEGLPLSHRQARKWM 255
+RA + Y+ G G+ R+A KW+
Sbjct: 1158 SLGVLHLHGCGVAKNEPEALRLIRAAAEFDHDDHGQFTLGWMYAKGVGVARDEREAVKWL 1217
Query: 256 KRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETA 297
K AA+ G+G AQ E+GLG+ + E A +Y + A R A
Sbjct: 1218 KAAAEQGNGDAQTHLGWMYENGLGV-AKNEKEAARLYGQAAERGNADA 1264
>gi|354594462|ref|ZP_09012501.1| hypothetical protein CIN_11970 [Commensalibacter intestini A911]
gi|353672138|gb|EHD13838.1| hypothetical protein CIN_11970 [Commensalibacter intestini A911]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 25/149 (16%)
Query: 132 AARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH 191
A++G A ++ GLMY +R V D A +A + +A+ G
Sbjct: 38 ASQGDVKAQLNVGLMY------------FRGEGVSEDGA-------KAFENFTKAAEQGD 78
Query: 192 VRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 251
+AQY L L + GRG+ + +A W+ ++AE G + A+ Y+ G G+P + +A
Sbjct: 79 AQAQYILGLMYYLGRGIPQDYTKAFEWFHKSAEQGNIDALVGIGYLYAEGRGVPQDYFEA 138
Query: 252 RKWMKRAADCGHGKAQL------EHGLGL 274
KW +AAD G +AQL E+G G+
Sbjct: 139 IKWFSKAADQGDAEAQLKLANMYENGQGV 167
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAA 164
L G + G GV ++ KA ++F K A +G A GLMY+
Sbjct: 47 LNVGLMYFRGEGVSEDGAKAFENFTKAAEQGDAQAQYILGLMYY---------------- 90
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
LG P + +A + ++++ G++ A + GRGV + EA +W+ +AA+
Sbjct: 91 -LGRGI--PQDYTKAFEWFHKSAEQGNIDALVGIGYLYAEGRGVPQDYFEAIKWFSKAAD 147
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
G A + Y G+G+P + +A + +AA+ G+ A L G+G E
Sbjct: 148 QGDAEAQLKLANMYENGQGVPQDYAKAIELYTQAANKGNAIAFL--GIGAIYE 198
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP Q + L Q + G V+AQ + L RG GV + +A + +AAE G
Sbjct: 25 DPTPQD------IAALEQKASQGDVKAQLNVGLMYFRGEGVSEDGAKAFENFTKAAEQGD 78
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 278
+A Y L Y G G+P + +A +W ++A+ G+ A + G+G L+ EG
Sbjct: 79 AQAQYILGLMYYLGRGIPQDYTKAFEWFHKSAEQGNIDALV--GIGYLYAEG 128
>gi|421883900|ref|ZP_16315123.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379986519|emb|CCF87396.1| TPR repeat-containing protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 376
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 31/237 (13%)
Query: 43 RRSRFSCSRSIKST--EGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLRE 100
R++ + ++ I S+ GH +P +VL A A + ++W
Sbjct: 94 RQAVYWLNKGIPSSYAPGH----IPLNVLYDKAHP-------ADRVYSQTWYRKAAQRVM 142
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 143 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGESVSQDYQQA 202
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 203 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 262
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 263 TGRGVPENSRNALKWYLKAAEQGFAPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 319
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G V + Q+A WY +AA G A + + +FG G+
Sbjct: 173 AAAQGLAEAQDAIGVMFMQGESVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 232
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 233 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 263
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
AA P N V+ AS AQ++L + G+GV + Q+ A +AAE Y
Sbjct: 20 AASPTNDAGVVRGQGSAS-----SAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYP 74
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
A + Y +GEG+P +RQA W+ + + +
Sbjct: 75 AQLYLGVAYFYGEGVPQDYRQAVYWLNKGIPSSYAPGHI 113
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 205 GRGVDFNLQEAARWYLRAA----EGGYVR-------AMYNTSLCYSFGEGLPLSHRQARK 253
G G N Q A WY +AA + G VR A + + Y+ G+G+P ++Q
Sbjct: 3 GDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAI 62
Query: 254 WMKRAADCGHGKAQLEHGLGLF 275
M++AA+ + AQL G+ F
Sbjct: 63 LMRKAAENMYYPAQLYLGVAYF 84
>gi|21673786|ref|NP_661851.1| hypothetical protein CT0958 [Chlorobium tepidum TLS]
gi|21646914|gb|AAM72193.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 248
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDP 169
++ +GR V ++ +AL AA+G+ A G MY +K +
Sbjct: 56 KYYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMY----QKGLGV------------ 99
Query: 170 AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVR 229
P + EA+K A+ + AQ Q+ H G GV+ + EA +WY +A G
Sbjct: 100 ---PQDYAEAMKWYRLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFA 156
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKA 283
A N + Y G+G+ + +A +W + +A G+G+A+L +HGLG+ E ++ KA
Sbjct: 157 AEDNIGVLYEHGQGVEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGV--ELDLNKA 214
Query: 284 VV-YLELATRAGETAA 298
V Y A + E AA
Sbjct: 215 VKWYRSAAAKGNEEAA 230
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
+Y +A+ + GR VD + EA +W +A G A Y Y G G+P + +A KW
Sbjct: 50 EYLIAMKYYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKW 109
Query: 255 MKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
+ AA + AQ HG G+ E + +A+ + ++ G AA+ V+ +
Sbjct: 110 YRLAAAKDNDNAQNQIGYLYHHGWGV--ETDYAEAMKWYRISAAKGNFAAEDNIGVLYEH 167
Query: 309 LSATSRDRA 317
+D A
Sbjct: 168 GQGVEQDYA 176
>gi|338999938|ref|ZP_08638573.1| Sel1 domain-containing protein [Halomonas sp. TD01]
gi|338763182|gb|EGP18179.1| Sel1 domain-containing protein [Halomonas sp. TD01]
Length = 305
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G F+ G+GV +LD+A + A D GL D + LY + G
Sbjct: 57 GMMFERGQGVSASLDEAYKWYRLAA---------DNGLA----DAQVRLAELYLLERLEG 103
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A + +A+ +G+ AQ+QL L G+GVD N + AARW+ AAE G+
Sbjct: 104 DSGL-------AAQWFERAAESGNAAAQFQLGLLYLEGQGVDENAELAARWFELAAEQGH 156
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKA 283
V A N Y G G+ S+ +A +W +RAA AQ H G + A
Sbjct: 157 VAAQNNIGSLYETGRGVEQSYTRAFEWYERAAKQNDPFAQNNLGAMHARGHGVDRNHAWA 216
Query: 284 VVYLELATRAGETAADHVKNVILQQL 309
V + +A + G A N L L
Sbjct: 217 VFWFVMAAQGGNDLAQENINASLPNL 242
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ +Q+ L + RG+GV +L EA +WY AA+ G A + Y E L
Sbjct: 48 GNSDSQFALGMMFERGQGVSASLDEAYKWYRLAADNGLADAQVRLAELYLL-ERLEGDSG 106
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGETAADH 300
A +W +RAA+ G+ AQ + GL L+ EG+ + A + ELA G AA +
Sbjct: 107 LAAQWFERAAESGNAAAQFQLGL-LYLEGQGVDENAELAARWFELAAEQGHVAAQN 161
>gi|260555636|ref|ZP_05827856.1| Sel1 repeat family [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|260410547|gb|EEX03845.1| Sel1 repeat family [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|452948342|gb|EME53821.1| hypothetical protein G347_14658 [Acinetobacter baumannii MSP4-16]
Length = 266
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EA+ L G+++ G+ V++N KAL+ F K + +G A D G MY+E +
Sbjct: 39 EALRLYEEGQKYFLGKDVKQNYQKALELFQKASDQGLAEAQNDLGGMYFEGLGTTQDYQK 98
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A + AA AAQ + ++A++L ++ G+ +AQY L
Sbjct: 99 AFKYFDSAANQKLAAAQYNLGLMYDKGLYIQKDRKKALELYELSTEQGYAKAQYNLGNAY 158
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G GV N +A + +AA+ +A YN Y+ GEG+ +++A ++ +AA G
Sbjct: 159 ANGDGVPQNNTKALELFSKAAQQNLPQASYNLGNMYADGEGVTQDNKKALEYFTKAAQQG 218
Query: 263 HGKAQ 267
+AQ
Sbjct: 219 FPQAQ 223
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Query: 151 DKKEAAISLYR--QAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+K A+ LY Q LG Q N ++A++L +AS G AQ L G G
Sbjct: 35 EKSSEALRLYEEGQKYFLGKDVKQ--NYQKALELFQKASDQGLAEAQNDLGGMYFEGLGT 92
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ Q+A +++ AA A YN L Y G + ++A + + + + G+ KAQ
Sbjct: 93 TQDYQKAFKYFDSAANQKLAAAQYNLGLMYDKGLYIQKDRKKALELYELSTEQGYAKAQY 152
Query: 269 EHG 271
G
Sbjct: 153 NLG 155
>gi|83747168|ref|ZP_00944211.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
UW551]
gi|207741885|ref|YP_002258277.1| hypothetical protein RSIPO_00065 [Ralstonia solanacearum IPO1609]
gi|83726143|gb|EAP73278.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum
UW551]
gi|206593271|emb|CAQ60198.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 252
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 124 ALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLL 183
A D F + A RG+ LA D +M L R + P E A+K L
Sbjct: 64 AFDEFAEAAQRGNRLAQFDYAMM------------LMRGEGTVAQP-------EAAIKWL 104
Query: 184 YQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG 243
+A+ AQ+ RG V +L EA +WY RAA GG++ A + Y G G
Sbjct: 105 RRAADNQMTHAQFVYGELFERGELVPRSLPEANKWYERAATGGHIEAQRALATNYFTGRG 164
Query: 244 LPLSHRQARKWMKRAADCGHGKAQ 267
+P + +A W K+AA+ G G +Q
Sbjct: 165 VPRDYGRAFIWYKKAAEGGDGPSQ 188
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ G+ AQ+ A+ L RG G + A +W RAA+ A + + GE +
Sbjct: 70 EAAQRGNRLAQFDYAMMLMRGEGTVAQPEAAIKWLRRAADNQMTHAQFVYGELFERGELV 129
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
P S +A KW +RAA GH +AQ FT
Sbjct: 130 PRSLPEANKWYERAATGGHIEAQRALATNYFT 161
>gi|91793809|ref|YP_563460.1| Sel1 [Shewanella denitrificans OS217]
gi|91715811|gb|ABE55737.1| Sel1 [Shewanella denitrificans OS217]
Length = 348
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 54/234 (23%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQA 163
G + G+G+ N + A + LK A +G A G MY + E I+ YR A
Sbjct: 92 GLSYYGGQGIDINYELAFEWLLKTAKQGFEPAYDVVGSMYSKGQGVEKNINETVKWYRLA 151
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G A P + +AVK A+ + AQY +AL RG GVD
Sbjct: 152 AEGGSGAVSYVLASMYYYGTDIPKDLAQAVKYFSNAANLNYADAQYTMALLYARGEGVDV 211
Query: 211 NLQEA------------------------------------ARWYLRAAEGGYVRAMYNT 234
+ Q++ RW+ AA+ G A +
Sbjct: 212 DTQKSMELLLAAAEQELVDAQFFLGEIFRTGEWGDKDPKASCRWHQLAADQGNFNAQFRV 271
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
LC+ G+G PL++ +A K+ + AA+ G AQ GL ++T G ++ Y+E
Sbjct: 272 GLCFYTGKGKPLNYEEAVKYFQLAAEQGQNNAQYLLGL-MYTTGMAGLSIDYVE 324
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASI 188
D GL+ +MD+++A + LY+QAA LG+ AQ N E A + L + +
Sbjct: 60 DEGLVV-DMDQQKA-VMLYKQAAELGNIKAQFNLGLSYYGGQGIDINYELAFEWLLKTAK 117
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G A + +G+GV+ N+ E +WY AAEGG Y + Y +G +P
Sbjct: 118 QGFEPAYDVVGSMYSKGQGVEKNINETVKWYRLAAEGGSGAVSYVLASMYYYGTDIPKDL 177
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
QA K+ AA+ + AQ L L+ GE
Sbjct: 178 AQAVKYFSNAANLNYADAQYTMAL-LYARGE 207
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSH 248
G+ AQ+++ LC + G+G N +EA +++ AAE G A Y L Y+ G GL + +
Sbjct: 263 GNFNAQFRVGLCFYTGKGKPLNYEEAVKYFQLAAEQGQNNAQYLLGLMYTTGMAGLSIDY 322
Query: 249 RQARKWMKRAADCGHGKAQ 267
+ARKW+ +A+ G+ KA+
Sbjct: 323 VEARKWLILSAEQGNVKAK 341
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 198 LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
LA G VD + Q+A Y +AAE G ++A +N L Y G+G+ +++ A +W+ +
Sbjct: 55 LANFYDEGLVVDMDQQKAVMLYKQAAELGNIKAQFNLGLSYYGGQGIDINYELAFEWLLK 114
Query: 258 AADCGHGKAQLEHGLGLFTEGE-----MMKAVVYLELATRAGETAADHV 301
A G A G ++++G+ + + V + LA G A +V
Sbjct: 115 TAKQGFEPAYDVVG-SMYSKGQGVEKNINETVKWYRLAAEGGSGAVSYV 162
>gi|373471191|ref|ZP_09562259.1| Sel1 repeat protein, partial [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371760930|gb|EHO49589.1| Sel1 repeat protein, partial [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G+R+ +G GV ++ ++A+ F K A ++ A G Y+ + D EA + Y +
Sbjct: 16 GERYYNGDGVEQDYNEAIKWFKKSAENNNSWAQNALGNAYYNGLGIKQDYYEA-VKWYHK 74
Query: 163 AAVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A G Q E +A+K +++ + AQ L + G GV+
Sbjct: 75 SAEQGYHWGQYNLGERYYDGVGVEQDYIKAMKWFKKSAENNNSWAQNALGNGYYNGLGVN 134
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ A WY ++AE GY YN + Y +GEGL + +A KW K++A+ + AQ
Sbjct: 135 KDYYAAVEWYRKSAEQGYHWGQYNLGIRYYYGEGLQQDYNEAIKWFKKSAENNNSWAQTA 194
Query: 270 HGL----GLFTEGEMMKAV 284
G GL T + +AV
Sbjct: 195 LGTCYYNGLGTNQDYYEAV 213
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQ 162
G + +G GV K+ A++ + K A +G + G+ Y+ + D EA I +++
Sbjct: 124 GNGYYNGLGVNKDYYAAVEWYRKSAEQGYHWGQYNLGIRYYYGEGLQQDYNEA-IKWFKK 182
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
+A + AQ A + EAV+ +++ + QY LA + G GVD
Sbjct: 183 SAENNNSWAQTALGTCYYNGLGTNQDYYEAVEWYNKSAQQNYGLGQYNLANMYYNGFGVD 242
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ A Y AA A Y S Y G G+ ++ + +W K+AA G
Sbjct: 243 RDYNMALTLYTYAANNNVGDAAYMLSCMYYHGYGVQVNPKMEYEWAKKAAQLG 295
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEA------- 155
G R+ +G G++++ ++A+ F K A ++ A G Y+ D EA
Sbjct: 160 GIRYYYGEGLQQDYNEAIKWFKKSAENNNSWAQTALGTCYYNGLGTNQDYYEAVEWYNKS 219
Query: 156 -----AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
+ Y A + + + A+ L A+ A Y L+ + G GV
Sbjct: 220 AQQNYGLGQYNLANMYYNGFGVDRDYNMALTLYTYAANNNVGDAAYMLSCMYYHGYGVQV 279
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N + W +AA+ G M N CY +G G+ + A++W K+A+ G
Sbjct: 280 NPKMEYEWAKKAAQLGSAEGMTNLGNCYYYGRGITENKSLAKEWYKKASKAG 331
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+R+ G GV ++ KA+ F K A ++ A G Y Y V
Sbjct: 88 GERYYDGVGVEQDYIKAMKWFKKSAENNNSWAQNALGNGY------------YNGLGVNK 135
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D A AV+ +++ G+ QY L + + G G+ + EA +W+ ++AE
Sbjct: 136 DYYA-------AVEWYRKSAEQGYHWGQYNLGIRYYYGEGLQQDYNEAIKWFKKSAENNN 188
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM 281
A CY G G + +A +W ++ AQ +GLG + M
Sbjct: 189 SWAQTALGTCYYNGLGTNQDYYEAVEWYNKS-------AQQNYGLGQYNLANMY 235
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ QY L + G GV+ + EA +W+ ++AE A Y G G+ +
Sbjct: 7 GYHWGQYNLGERYYNGDGVEQDYNEAIKWFKKSAENNNSWAQNALGNAYYNGLGIKQDYY 66
Query: 250 QARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLE 288
+A KW ++A+ G+ Q G G+ E + +KA+ + +
Sbjct: 67 EAVKWYHKSAEQGYHWGQYNLGERYYDGVGVEQDYIKAMKWFK 109
>gi|260756423|ref|ZP_05868771.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
870]
gi|260676531|gb|EEX63352.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
870]
Length = 893
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N+++AA+WY AA+ G AM
Sbjct: 694 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKKAAKWYQLAADQGNASAM 753
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
+N ++ ++ G + A +W AA+ G +Q G+ GL + ++ +
Sbjct: 754 HNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWF 813
Query: 288 ELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
LA AG+ A ++ I + L RA V W+A P
Sbjct: 814 ALAANAGDKDAAEKRDQIAKALKPEMLTRAKGAVKLWKAKP 854
>gi|423141051|ref|ZP_17128689.1| Sel1 repeat protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379053605|gb|EHY71496.1| Sel1 repeat protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 324
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 161 RQAAVLGDPAAQPA------NAEEAVKLLY---QASIAGHVRAQYQLALCLHRGRGVDFN 211
R+AA GD AQ A+ K Y +++ G+ AQY + + GRGV N
Sbjct: 51 RRAAEQGDMVAQNELGVLYEKAKNHTKSAYWYNKSTEKGYSLAQYNIGVAYENGRGVSKN 110
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
Q+A WY +AA GY +A +N + Y G+G+P +R++R+W +AA
Sbjct: 111 YQKANDWYRKAAIQGYSKAAFNLGMLYFEGKGVPQDYRKSREWFMQAA 158
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 147 YWEMDKKEAAISL--YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
YW E SL Y + N ++A +A+I G+ +A + L +
Sbjct: 80 YWYNKSTEKGYSLAQYNIGVAYENGRGVSKNYQKANDWYRKAAIQGYSKAAFNLGMLYFE 139
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G+GV + +++ W+++AA AMY Y +G G+P RQA W ++ D G
Sbjct: 140 GKGVPQDYRKSREWFMQAAAENNTMAMYAMGRIYYYGLGVPKDDRQAIVWYQKGVDLGSM 199
Query: 265 KAQLEHGLGLFTEG 278
+A+ L L+++G
Sbjct: 200 RARNSLAL-LYSQG 212
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++GRGV KN KA D + K A +G + A + G++Y+E
Sbjct: 98 GVAYENGRGVSKNYQKANDWYRKAAIQGYSKAAFNLGMLYFE------------------ 139
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P + ++ + QA+ + A Y + + G GV + ++A WY + + G
Sbjct: 140 -GKGVPQDYRKSREWFMQAAAENNTMAMYAMGRIYYYGLGVPKDDRQAIVWYQKGVDLGS 198
Query: 228 VRAMYNTSLCYS-FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
+RA + +L YS G+G +A + +A G+ AQ G+ L+++G
Sbjct: 199 MRARNSLALLYSQGGDGFYKDRVKALSLLIASACQGYVVAQNNLGV-LYSDG 249
>gi|400756662|ref|NP_953493.2| hypothetical protein GSU2447 [Geobacter sulfurreducens PCA]
gi|399107973|gb|AAR35820.2| TPR-related repeat protein [Geobacter sulfurreducens PCA]
Length = 252
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D + P EA + + A+ GHVRAQY L H G GV + AARW +AA GG
Sbjct: 59 DGSGAPRKPTEAARYMKMAAERGHVRAQYYLGTFYHEGTGVKRDTSAAARWIGKAAAGGD 118
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A Y + G+G+P+ +A +W+ +A+ G+
Sbjct: 119 AEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGN 154
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +A ++LAL G G EAAR+ AAE G+VRA Y Y G G+
Sbjct: 45 GDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRAQYYLGTFYHEGTGVKRDTS 104
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHVKNVI 305
A +W+ +AA G +AQ +G+ L + +G + ++A+ +L A+R G A V
Sbjct: 105 AAARWIGKAAAGGDAEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDV---- 160
Query: 306 LQQLSA 311
LQ+L A
Sbjct: 161 LQELVA 166
>gi|380023934|ref|XP_003695764.1| PREDICTED: LOW QUALITY PROTEIN: protein sel-1 homolog 1-like [Apis
florea]
Length = 741
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 353 HYQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAA 412
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
LG+P Q + +A++ QA+ G V Q QL G GV +
Sbjct: 413 ELGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRD 472
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 473 YKLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMIA 532
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 312
+ EG + +A V L G A IL + T
Sbjct: 533 HTDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDKGETT 573
>gi|332878139|ref|ZP_08445868.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683877|gb|EGJ56745.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 780
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ + +G+GV K+ +KA++ K AA+GS A+ G Y Y + ++G
Sbjct: 220 GQAYLNGKGVTKSEEKAIEWLEKAAAKGSAEALYTMGNFY-----------FYGNSPLIG 268
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
++A++ +A+ G AQ QL++CL+ G G + ++A W R+
Sbjct: 269 KF------YKKAIEYYSKAAAKGDANAQRQLSVCLYNGIGGTQSYRDAFNWLSRSVNADP 322
Query: 228 VRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM--MKAV 284
N +CY+ G G S QA + ++A++ G AQ G L EG++ K
Sbjct: 323 TPVTENNLGVCYTTGNGTRASIPQAMELFQKASEAGDAMAQYNLGSLLLEEGQLDVKKGF 382
Query: 285 VYLE 288
YLE
Sbjct: 383 EYLE 386
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
++AV L +A+ AG V AQYQ+A C G+GV + ++ W + AEGG A +L
Sbjct: 57 QDAVVWLEKAAEAGDVNAQYQIAQCYMEGKGVAKSEEKGVEWLTKVAEGGNADAQRQLAL 116
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATR 292
CY G G+ S+ + W+++ AD + QL+ + +G + ++ KA + E ++
Sbjct: 117 CYRDGRGVAQSNEKYFFWIEKVADGEKPETQLDLAKAYYVGDGVKKDLNKARFWAEKSSA 176
Query: 293 AGETAADHV 301
G A+++
Sbjct: 177 KGNLEAEYL 185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A+ +A+ AQ LA C + G G + + ++AA Y ++A GY A Y + C
Sbjct: 681 QALNYYQKAAQRDFAEAQCNLANCYYNGTGAERSYEKAAELYRQSARNGYPIAQYRLAHC 740
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
Y GEG+ S +A W +A + G ++ G EM+K VV
Sbjct: 741 YFHGEGIGQSDDRAADWFDQACENG-----VQRGC------EMLKVVV 777
>gi|386745030|ref|YP_006218209.1| hypothetical protein S70_18585 [Providencia stuartii MRSN 2154]
gi|384481723|gb|AFH95518.1| hypothetical protein S70_18585 [Providencia stuartii MRSN 2154]
Length = 343
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+K L AS G + AQ+ LAL RG G+ + +A W++RAA+ G A Y T CY
Sbjct: 243 AIKWLTLASEQGEISAQFNLALIYARGDGMPADQAKACHWFIRAAQHGNNDAQYATGACY 302
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+G G+ R+A W K AA G+ +A+
Sbjct: 303 QYGMGVKQDDRKALYWYKLAASQGNERAE 331
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
A+ ++A + +++ G AQ L + G+GV ++ A +W A+E G + A +N
Sbjct: 202 ADYQQAYQYFSRSAQLGFSPAQNSLGMLYLHGQGVKKEVKSAIKWLTLASEQGEISAQFN 261
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLEL 289
+L Y+ G+G+P +A W RAA G+ AQ G G+ + + KA+ + +L
Sbjct: 262 LALIYARGDGMPADQAKACHWFIRAAQHGNNDAQYATGACYQYGMGVKQDDRKALYWYKL 321
Query: 290 ATRAGETAADHVKNVILQ 307
A G A+ K +IL+
Sbjct: 322 AASQGNERAEK-KVLILE 338
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A P + + +LL +++ G AQ+ LA+ L + L EAA+WY +A+ G+ +A
Sbjct: 21 AAPLSPPQDKQLLLKSAQDGQAEAQFNLAMLLQSEK----QLTEAAKWYRLSAQQGFTKA 76
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N +L Y G G+ S Q WMK+AA+ G QL
Sbjct: 77 QINLALLYQQGNGVDKSPEQMLFWMKKAAEAGDPLGQL 114
>gi|430375764|ref|ZP_19430167.1| hypothetical protein MOMA_01400 [Moraxella macacae 0408225]
gi|429540995|gb|ELA09023.1| hypothetical protein MOMA_01400 [Moraxella macacae 0408225]
Length = 194
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
++K L + AG+ +AQ+ LA +G G+ N +A +WY AA+ A N ++ Y
Sbjct: 39 SIKDLTAQAKAGNQQAQFFLAKRYQKGIGIQQNFSQALQWYTTAAKQDIAPAQLNLAMMY 98
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE--MMKAVVYLELATRAGET 296
GEG+ + +QAR W+++AA G +A + L + E + ++ A + +LA+R G
Sbjct: 99 IRGEGVKPNAQQARYWLEKAAKLGDNRA--SYTLAMLDEKDKKLVDAYKWYDLASRDG-M 155
Query: 297 AADHVK------------NVILQQLSATSRDRAMLVVDSW 324
+D V+ N+ +Q + AT+R RA DSW
Sbjct: 156 LSDQVRSKAQSKIGQLALNLSIQDI-ATARSRA----DSW 190
>gi|307205848|gb|EFN84031.1| Protein sel-1-like protein 1 [Harpegnathos saltator]
Length = 764
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK-----KEAAISLYRQAA 164
++ GRGV + +KA+ F A G+ +AM G +Y E + E A +++AA
Sbjct: 374 HYQGGRGVPLDHEKAVQYFQHAADAGNPVAMAFLGKIYLEGSEIVKQDNETAYKYFKKAA 433
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
LG+P Q N +A + + A+ G V Q QL G GV +
Sbjct: 434 ELGNPVGQSGLGLMYLYGMGVERNTGKAWQYFHHAAEQGWVDGQLQLGNMYFSGIGVKRD 493
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +++ A++ G+V A YN + ++ G G+ S A + MK A+ G QL
Sbjct: 494 YKMANKYFNLASQSGHVLAYYNLAQMHATGTGMVRSCPPAVELMKNVAERGKWSDQLMMA 553
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVIL 306
+ EG++ +A + L + G A IL
Sbjct: 554 HTDYREGKVNEAFLIYALFSEMGYEVAQSNAAFIL 588
>gi|350414268|ref|XP_003490261.1| PREDICTED: protein sel-1 homolog 1-like [Bombus impatiens]
Length = 741
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAA 164
++ GRGV + ++AL F A G+ LAM G +Y E E A +++AA
Sbjct: 353 HYQGGRGVPLDHERALQYFQHAADAGNPLAMAFLGKIYLEGSDIVKQDNETAYKYFKKAA 412
Query: 165 VLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
LG+P Q + +A++ QA+ G V Q QL G GV +
Sbjct: 413 ELGNPVGQSGLGLMYLYGRGVERDTAKALQYFSQAAEQGWVDGQLQLGNMYFSGTGVRRD 472
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ A +++ A++ G+V A YN + ++ G G+ S A + +K A+ G QL
Sbjct: 473 YKLANKYFSLASQSGHVLAFYNLAQMHATGTGMMRSCPAAVELLKNVAERGKWSDQLMVA 532
Query: 272 LGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQ 308
+ EG + +A V L G A IL +
Sbjct: 533 HTDYREGRINEAFVNYALLAEMGYEVAQSNAAFILDK 569
>gi|328771093|gb|EGF81133.1| hypothetical protein BATDEDRAFT_19171 [Batrachochytrium
dendrobatidis JAM81]
Length = 371
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 35/202 (17%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGL--MYWEMDKKE---AAISLYRQAAV 165
F+ G G R+N D+A++ + + A G T AM G+ +Y + +++ ++L ++AA
Sbjct: 116 FEVGAGTRRNTDRAIEYYRRAAKLGDTAAMFKLGMIQIYGTLGQQQNPREGVTLLKRAAE 175
Query: 166 LGDPAAQPANAEEAV---------------------KLLYQASIAGHVRAQYQLALCLHR 204
D + A E A+ +LL Q++ G+ +QY+L LC
Sbjct: 176 QADETSPNALHELAILYEGEIPGITNVIIPDPAYSHELLTQSAKLGYAPSQYKLGLCHEY 235
Query: 205 GR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG--LPLSHRQARKWMKRAADC 261
G GV + + + WY +AAE G A S Y G L S ++A W ++AAD
Sbjct: 236 GNLGVPIDPRRSIAWYTKAAEQGDPDAELALSGWYLTGADGILKQSDQEAYLWARKAADK 295
Query: 262 GHGKAQ------LEHGLGLFTE 277
G KA+ +EHG+G+ ++
Sbjct: 296 GLAKAEYAVGYFVEHGVGIRSD 317
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-G 243
QA+ H A Y++A+ G G N A +Y RAA+ G AM+ + +G G
Sbjct: 99 QAAKQNHPAATYRVAVSFEVGAGTRRNTDRAIEYYRRAAKLGDTAAMFKLGMIQIYGTLG 158
Query: 244 LPLSHRQARKWMKRAAD-CGHGKAQLEHGLGLFTEGEM 280
+ R+ +KRAA+ H L + EGE+
Sbjct: 159 QQQNPREGVTLLKRAAEQADETSPNALHELAILYEGEI 196
>gi|313683440|ref|YP_004061178.1| sel1 domain-containing protein repeat-containing protein
[Sulfuricurvum kujiense DSM 16994]
gi|313156300|gb|ADR34978.1| Sel1 domain protein repeat-containing protein [Sulfuricurvum
kujiense DSM 16994]
Length = 227
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS----LYRQAAVLGDPAA------ 171
++A++ F A + + +A+ G M+ + E+++ LY QAA L +PAA
Sbjct: 15 EEAIELFETLALQNNPIALSSLGYMHQKGLGIESSLERSFHLYTQAAELNEPAALYNLAL 74
Query: 172 -------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
P + ++ +LL +A++ +AQ+++AL L RG G N EAA WY AA+
Sbjct: 75 MYADGVVVPHDQFKSYELLLRAAVLEFPQAQFEVALALERGLGCVQNFSEAAFWYEEAAK 134
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEM 280
G A N + + G G+ H +A RAA+ +AQ GL GL E +
Sbjct: 135 RGNANAFNNLGVLFKEGHGVVQDHAKAFICFSRAANANLAEAQYNLGLMYDQGLGCEADH 194
Query: 281 MKAVVYLELATRAGETAADHVKNVI 305
A LE +A + K++I
Sbjct: 195 DTA---LEWCRKAAYNGHEKAKSII 216
>gi|163758203|ref|ZP_02165291.1| Sel1-like repeat protein [Hoeflea phototrophica DFL-43]
gi|162284492|gb|EDQ34775.1| Sel1-like repeat protein [Hoeflea phototrophica DFL-43]
Length = 228
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 89/226 (39%), Gaps = 53/226 (23%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EAM+ L G + +G G + KA + F + A G AM + G M
Sbjct: 39 EAMMWL--GSCYANGEGKPVSPAKAFECFERSAKAGFAQAMTNVGAML------------ 84
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
G A+ + E +K L AS V AQ+ LA L G+ V+ ++ AA WY
Sbjct: 85 -----ATGQGCAR--DVEAGLKWLEMASELNDVGAQFNLATILSSGKDVEPDMDRAAHWY 137
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
RAAE G+ + CY G G+P S A W AA +HG+G
Sbjct: 138 KRAAEQGHYPSQARLGYCYQHGSGVPKSRVNAYVWYALAA---------QHGVG------ 182
Query: 280 MMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWR 325
A+ LE ILQ +SA + ++ SWR
Sbjct: 183 --TALSSLER---------------ILQDMSAEEKREGAALIHSWR 211
>gi|386036468|ref|YP_005956381.1| hypothetical protein KPN2242_19665 [Klebsiella pneumoniae KCTC
2242]
gi|424832307|ref|ZP_18257035.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339763596|gb|AEJ99816.1| hypothetical protein KPN2242_19665 [Klebsiella pneumoniae KCTC
2242]
gi|414709747|emb|CCN31451.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 440
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+M+K ++ I A+ A P N + +K + + +G AQ QL + G GV
Sbjct: 18 DMNKMKSVICFLALGAISPHAWATPNNDD--IKAMLSQAKSGDASAQTQLGILYAEGSGV 75
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ ++A W+ +A + Y A YN + Y G+G+ +++A W ++AA+ GH A+
Sbjct: 76 TRDYKKARSWFEQAGKQNYADAEYNLGVMYGNGDGVARDNKKALTWFEKAAEHGHIGARY 135
Query: 269 EHGL----GLFTEGEMMKAVVYLELATRAG 294
G+ G+ T + ++A + ELA + G
Sbjct: 136 NLGMIYSQGIGTAKDPVRATFWFELAGQDG 165
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A + G + G GV ++ KA F + + A + G+MY
Sbjct: 58 DASAQTQLGILYAEGSGVTRDYKKARSWFEQAGKQNYADAEYNLGVMYGN---------- 107
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
GD A+ + ++A+ +A+ GH+ A+Y L + +G G + A W+
Sbjct: 108 -------GDGVAR--DNKKALTWFEKAAEHGHIGARYNLGMIYSQGIGTAKDPVRATFWF 158
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A + G V Y + YS GE L + +AR+W +RAA+ GH AQ + +++EG
Sbjct: 159 ELAGQDGSVEDKYTLGVMYSKGEPLEKNDVKARQWFERAANEGHVLAQYNLAV-MYSEG 216
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----------------WEMD 151
G + +G GV ++ KAL F K A G A + G++Y +E+
Sbjct: 102 GVMYGNGDGVARDNKKALTWFEKAAEHGHIGARYNLGMIYSQGIGTAKDPVRATFWFELA 161
Query: 152 KKEAAISLYRQAAVL---GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
++ ++ V+ G+P + N +A + +A+ GHV AQY LA+ G G
Sbjct: 162 GQDGSVEDKYTLGVMYSKGEPLEK--NDVKARQWFERAANEGHVLAQYNLAVMYSEGLGG 219
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
D +LQ+A W +AA G A S+ G+ P
Sbjct: 220 DRDLQKARHWADKAAGQGDPEATRLLSVLNERGKQSPF 257
>gi|290982691|ref|XP_002674063.1| predicted protein [Naegleria gruberi]
gi|284087651|gb|EFC41319.1| predicted protein [Naegleria gruberi]
Length = 551
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYR------ 161
G ++ GV +NL KA + L+ A +G T +M+ Y E + + R
Sbjct: 120 GLLYRFAEGVEQNLPKAFEFHLRAAKQGITTSMLAVACSY------ELGMGIMRDISKSF 173
Query: 162 ----QAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
+AA GD AQ + ++ + +A+ VRAQ + + +
Sbjct: 174 EWLLKAAENGDVGAQYYVGHAYEIGEGVEPDDTKSFEWYLKAAEQMDVRAQLAIGISFYC 233
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
GRGV N +++ W+L+AAE G A + Y GEG+ + +A +W ++A+ GH
Sbjct: 234 GRGVTENQRKSFEWFLKAAEQGDKSAQFYVGCAYDSGEGVEKNRYKAFEWYLKSAENGHK 293
Query: 265 KAQL 268
AQ
Sbjct: 294 DAQF 297
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVLGDP 169
G GV K++ KA + +LK A G A + GL+Y + E A + +AA G
Sbjct: 90 GLGVEKDIRKAFEWYLKSAENGFAKAQCNVGLLYRFAEGVEQNLPKAFEFHLRAAKQGIT 149
Query: 170 AAQPANA-------------EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+ A A ++ + L +A+ G V AQY + G GV+ + ++
Sbjct: 150 TSMLAVACSYELGMGIMRDISKSFEWLLKAAENGDVGAQYYVGHAYEIGEGVEPDDTKSF 209
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
WYL+AAE VRA + + G G+ + R++ +W +AA+ G AQ G
Sbjct: 210 EWYLKAAEQMDVRAQLAIGISFYCGRGVTENQRKSFEWFLKAAEQGDKSAQFYVG 264
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
Q+++A H G GV+ ++++A WYL++AE G+ +A N L Y F EG+ + +A +
Sbjct: 79 TQFKIAYYYHIGLGVEKDIRKAFEWYLKSAENGFAKAQCNVGLLYRFAEGVEQNLPKAFE 138
Query: 254 WMKRAADCGHGKAQL----EHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
+ RAA G + L + LG+ ++ K+ +L A G+ A +
Sbjct: 139 FHLRAAKQGITTSMLAVACSYELGMGIMRDISKSFEWLLKAAENGDVGAQY 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 17/164 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
++ G G+ +++ K+ + LK A G A G Y + E + Y +AA
Sbjct: 159 YELGMGIMRDISKSFEWLLKAAENGDVGAQYYVGHAYEIGEGVEPDDTKSFEWYLKAAEQ 218
Query: 167 GDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
D AQ A N ++ + +A+ G AQ+ + G GV+ N
Sbjct: 219 MDVRAQLAIGISFYCGRGVTENQRKSFEWFLKAAEQGDKSAQFYVGCAYDSGEGVEKNRY 278
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+A WYL++AE G+ A +N Y G+G+ + W+ +
Sbjct: 279 KAFEWYLKSAENGHKDAQFNVVYAYEKGDGVEECFSKTVFWLAK 322
>gi|373120857|ref|ZP_09534890.1| hypothetical protein HMPREF0995_05726 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371655315|gb|EHO20667.1| hypothetical protein HMPREF0995_05726 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 685
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 160 YRQAAV-LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
YR A + L DPAA+P ++ L +A+ AG V AQY+L GRGV+ + AA W
Sbjct: 432 YRLAKIMLADPAAEPEQFRTTLEWLTEAADAGRVHAQYELGKIYRDGRGVEKDALLAAAW 491
Query: 219 YLRAAEGGYVRAMYNTS-LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
RAAE G A Y L + GEGL A W++R+A+ G+ AQ G
Sbjct: 492 LTRAAEQGSDTASYALGVLLLTGGEGLAKDIPSALNWLRRSAEDGNQYAQYRLG 545
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 23/174 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
GK ++ GRGV K+ A + A +GS A G++ +L
Sbjct: 472 GKIYRDGRGVEKDALLAAAWLTRAAEQGSDTASYALGVL------------------LLT 513
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ A+ L +++ G+ AQY+L L RG V ++EA RW +AE G
Sbjct: 514 GGEGLAKDIPSALNWLRRSAEDGNQYAQYRLGRLLLRGEDVPREIEEAIRWLTASAEQGN 573
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ-----LEHGLGLFT 276
A Y + G+ +P A +W +A G+ AQ ++ GL + +
Sbjct: 574 QYAQYALGKLFLIGKEVPQDPEAAVRWFALSAAQGNEYAQYFLDHMDEGLSILS 627
>gi|298159968|gb|EFI01006.1| hypothetical protein PSA3335_0918 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 513
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------------------ 149
G++++ G+GVRKN KA +S L A+RG LA G+ + E
Sbjct: 81 GRQYEEGKGVRKNPVKAFESMLAAASRGMALAQYKVGVFFEEGFGVSVDLSKAAQYYKAA 140
Query: 150 ---------------------MDKKE-AAISLYRQAAVLGDPAAQPA------------- 174
+ K E +AI + AA GD A +
Sbjct: 141 AEQGLHAAQSSYALMLRDGLGVKKDEVSAIGFMQSAANGGDATALNSLGVAYIIGSGVSR 200
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+A + V+LL A+ G AQ LA G GV+ + +EA +WY ++A G A
Sbjct: 201 DAVKGVQLLKLAAEKGDAIAQRNLAKSFSDGTGVEKDEREAFKWYRKSAVGNDKVAQLAL 260
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
Y +G G+ ++ A W KR+A G+ AQ + G
Sbjct: 261 GQSYEYGSGVEQDYKNALVWYKRSASTGYAPAQYKIG 297
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGS-TLAMVDAGLMYWEMD--KKEA--AISLYRQAAV 165
+ G GV+K+ A+ F++ AA G A+ G+ Y ++A + L + AA
Sbjct: 156 LRDGLGVKKDEVSAI-GFMQSAANGGDATALNSLGVAYIIGSGVSRDAVKGVQLLKLAAE 214
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD AQ + EA K ++++ AQ L G GV+ +
Sbjct: 215 KGDAIAQRNLAKSFSDGTGVEKDEREAFKWYRKSAVGNDKVAQLALGQSYEYGSGVEQDY 274
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ A WY R+A GY A Y Y+FG+G+ +++AR W++ AA G AQ
Sbjct: 275 KNALVWYKRSASTGYAPAQYKIGYFYNFGKGVAADYKEARYWLRLAATQGLAVAQ 329
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 29/253 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKE 154
+A L G + G GV ++ K + A +G +A + + E D++E
Sbjct: 181 DATALNSLGVAYIIGSGVSRDAVKGVQLLKLAAEKGDAIAQRNLAKSFSDGTGVEKDERE 240
Query: 155 AAISLYRQAAVLGDPAAQPANAEE-----AVKLLYQASIA--------GHVRAQYQLALC 201
A YR++AV D AQ A + V+ Y+ ++ G+ AQY++
Sbjct: 241 A-FKWYRKSAVGNDKVAQLALGQSYEYGSGVEQDYKNALVWYKRSASTGYAPAQYKIGYF 299
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
+ G+GV + +EA W AA G A + + + G+G + + A KW + AA
Sbjct: 300 YNFGKGVAADYKEARYWLRLAATQGLAVAQADLASLFELGQGGAVDNAAAAKWYRLAAAQ 359
Query: 262 GHGKAQ------LEHGLGLFTEGEMMKAVVYL-ELATRAGETAADHVKNVILQQLSATSR 314
+AQ L+ G G+ E + +A++YL LA+ A + + N+ L S+
Sbjct: 360 NMPRAQYQLAVMLKEGRGV--EIDYAEALLYLRSLASNNVSYAENELGNMYKNGL-GVSQ 416
Query: 315 DRAMLVVDSWRAM 327
D V W+A+
Sbjct: 417 DYLAAVDWYWKAV 429
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 21/175 (12%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISL 159
L G+ +++G GV ++ AL + + A+ G A G Y D KEA L
Sbjct: 258 LALGQSYEYGSGVEQDYKNALVWYKRSASTGYAPAQYKIGYFYNFGKGVAADYKEARYWL 317
Query: 160 YRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGR 206
R AA G AQ + A K A+ RAQYQLA+ L GR
Sbjct: 318 -RLAATQGLAVAQADLASLFELGQGGAVDNAAAAKWYRLAAAQNMPRAQYQLAVMLKEGR 376
Query: 207 GVDFNLQEAARWYLRAAEGGYVRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAAD 260
GV+ + E A YLR+ V N Y G G+ + A W +A +
Sbjct: 377 GVEIDYAE-ALLYLRSLASNNVSYAENELGNMYKNGLGVSQDYLAAVDWYWKAVN 430
>gi|357633782|ref|ZP_09131660.1| hypothetical protein DFW101_1661 [Desulfovibrio sp. FW1012B]
gi|357582336|gb|EHJ47669.1| hypothetical protein DFW101_1661 [Desulfovibrio sp. FW1012B]
Length = 692
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 26/185 (14%)
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A++ YR+AA G+ A P + A + +A+ AG RAQ+ L L
Sbjct: 448 AMAFYREAAEAGNVEAGFALGSLLSKGLAGPPDFVAARQWYEKAATAGDPRAQFNLGLMF 507
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
G+G + QEA RW L AA+ G A N + G G P R+A +W + AA G
Sbjct: 508 LTGKGGPASDQEALRWLLEAAKNGDANARCNVASLTLTGRGTPADAREAFRWYRLAA--G 565
Query: 263 HGKAQLEHGL-GLFTEGEMMK-----AVVYLELATRAGETA-----ADHVKNVILQQLSA 311
G AQ + L G + EG+++ A+ +L LA+RA + A K V+ ++L+
Sbjct: 566 QGFAQAQAMLAGFYYEGKVVPRDFETALFWLTLASRAPGSDPLLLRAGKAKAVLEKRLAP 625
Query: 312 TSRDR 316
RDR
Sbjct: 626 EQRDR 630
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +A+ +A+ AG+V A + L L +G + A +WY +AA G RA +N
Sbjct: 443 ANLAKAMAFYREAAEAGNVEAGFALGSLLSKGLAGPPDFVAARQWYEKAATAGDPRAQFN 502
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
L + G+G P S ++A +W+ AA G A+
Sbjct: 503 LGLMFLTGKGGPASDQEALRWLLEAAKNGDANAR 536
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 48/140 (34%), Gaps = 36/140 (25%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW-------------- 218
P LL QA+ AG A Y +AL G+GV N EA RW
Sbjct: 370 PGGVGTGTALLSQAAWAGDPEAMYAMALLHLAGKGVSGNPAEAFRWCRLAAEAGLPEAKA 429
Query: 219 ----------------------YLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
Y AAE G V A + S G P AR+W +
Sbjct: 430 LLAALSEEEFPSAANLAKAMAFYREAAEAGNVEAGFALGSLLSKGLAGPPDFVAARQWYE 489
Query: 257 RAADCGHGKAQLEHGLGLFT 276
+AA G +AQ GL T
Sbjct: 490 KAATAGDPRAQFNLGLMFLT 509
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 98/254 (38%), Gaps = 51/254 (20%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKH----------GR 115
+L K AA+ + P LV ++ DA L A+ L H R
Sbjct: 54 LPLLEKAAANGSAPSSHRLGLVLEAGRDAPEDLPRALALFTAAAGRGHVPAMVRAGALAR 113
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVL----- 166
V + AL + + A RG T AM + G+M + A ++ R+AA
Sbjct: 114 KVAGDDAAALGWYRRAADRGDTAAMAELGIMLFTGQGGTADPGAGMAWLRRAATAGNAQA 173
Query: 167 -------------------GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
G PA EA L QA AG AQ +LA G G
Sbjct: 174 ATALGQALLALAEAGNAANGSPA-------EAAALFRQAGEAGDPEAQNRLADLYASGTG 226
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N EAAR +AA+ GY A + L Y G+G+ +A + +RAA GH A
Sbjct: 227 VARNPAEAARLRRQAADAGYAPAAFALGLMYLSGQGVSAYPLEAARLFERAAGAGHVAAM 286
Query: 268 L------EHGLGLF 275
L + GLG+F
Sbjct: 287 LRLADMYQAGLGVF 300
>gi|427404689|ref|ZP_18895429.1| hypothetical protein HMPREF9710_05025 [Massilia timonae CCUG 45783]
gi|425716860|gb|EKU79829.1| hypothetical protein HMPREF9710_05025 [Massilia timonae CCUG 45783]
Length = 474
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQAAVL 166
+ G+GV + +AL F A G A G+ Y E AI +AA
Sbjct: 179 YARGQGVAPSPAQALYWFRHAAGAGDPTAQRQLGVAYAEGRGAGPDPALAIQWLERAAAG 238
Query: 167 GDPAA------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
G+ A P ++ A++ QA+ GHV+AQY++A L G GV +
Sbjct: 239 GEREALYVLGGLLSGGGMPRDSARALRCYMQAAARGHVQAQYRVARMLAGGCGVQRDPAR 298
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A +YL+AAEGG A + L Y+ G+G+P A W +RAA G AQ G +
Sbjct: 299 ALEFYLQAAEGGAANAQFALGLLYAKGQGVPRDLALAAAWYRRAAQQGDASAQNNLG-AM 357
Query: 275 FTEGEMMK-----AVVYLELATRAGETAADH 300
+ GE + A + LA R A H
Sbjct: 358 YACGEGVPRDDNLAAHWYRLAARQDHPPAQH 388
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 194 AQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARK 253
AQ L + GRGV + AA W+ RAAE G A +N L Y G G+P SH+ A
Sbjct: 63 AQNHLGAMYYNGRGVCRDHTRAAHWFQRAAEQGDRSAQHNLGLLYRKGRGVPRSHKAAIG 122
Query: 254 WMKRAADCGHGKAQLE------HGLGL 274
W RAA+ G +AQ + HGLG+
Sbjct: 123 WFYRAAEQGMARAQTQLAQGYLHGLGV 149
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A +A+ G AQ+ L L +GRGV + + A W+ RAAE G RA + Y
Sbjct: 84 AAHWFQRAAEQGDRSAQHNLGLLYRKGRGVPRSHKAAIGWFYRAAEQGMARAQTQLAQGY 143
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLELATRAG 294
G G+ +SH A W ++AA GH AQ++ + G +A+ + A AG
Sbjct: 144 LHGLGVNVSHPLAMAWFRKAAMQGHVPAQVQLAQMYARGQGVAPSPAQALYWFRHAAGAG 203
Query: 295 ETAADHVKNVILQQLSATSRDRAMLV 320
+ A V + D A+ +
Sbjct: 204 DPTAQRQLGVAYAEGRGAGPDPALAI 229
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + +GRGV ++ +A F + A +G A + GL+Y + +AAI + +A
Sbjct: 68 GAMYYNGRGVCRDHTRAAHWFQRAAEQGDRSAQHNLGLLYRKGRGVPRSHKAAIGWFYRA 127
Query: 164 AVLGDPAAQPANAEE-------------AVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ A+ A+ +A++ GHV AQ QLA RG+GV
Sbjct: 128 AEQGMARAQTQLAQGYLHGLGVNVSHPLAMAWFRKAAMQGHVPAQVQLAQMYARGQGVAP 187
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +A W+ AA G A + Y+ G G A +W++RAA G
Sbjct: 188 SPAQALYWFRHAAGAGDPTAQRQLGVAYAEGRGAGPDPALAIQWLERAAAGG 239
>gi|257455786|ref|ZP_05621012.1| Sel1 repeat-containing domain protein [Enhydrobacter aerosaccus
SK60]
gi|257446800|gb|EEV21817.1| Sel1 repeat-containing domain protein [Enhydrobacter aerosaccus
SK60]
Length = 193
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 23/161 (14%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
E + LL QA +G+ +AQ+ LA +G G+ N Q+A +WY AA+ A N ++
Sbjct: 38 EPMALLSQAK-SGNQQAQFFLAKRYQKGLGIQQNFQQAIQWYTTAAKQDIAPAQLNLAMM 96
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE--MMKAVVYLELATRAGE 295
Y GEG+ + QAR W+++AA G +A + L + E E ++ A + +LA R G
Sbjct: 97 YIRGEGVQPNAGQARYWLEKAAKLGDNRA--SYTLAMLDEKEKKLVDAYKWYDLAARDG- 153
Query: 296 TAADHVK------------NVILQQLSATSRDRAMLVVDSW 324
+D V+ N+ Q + AT+R RA DSW
Sbjct: 154 MLSDQVRTRAQSKIGQLALNLSSQDI-ATARSRA----DSW 189
>gi|187935086|ref|YP_001886041.1| Sel1 repeat family [Clostridium botulinum B str. Eklund 17B]
gi|187723239|gb|ACD24460.1| Sel1 repeat family [Clostridium botulinum B str. Eklund 17B]
Length = 269
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM----DKKEAAISLYRQA 163
G + G GV ++ +KA + F A++G+ A + MY E E AI Y +A
Sbjct: 81 GDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTGVNYEKAIKWYEKA 140
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A+ D AQ + + A K +ASI G+ ++Q L +G G++
Sbjct: 141 ALQEDFYAQYNLGNLYMYGKGVDIDYKRAFKWHMKASILGYEKSQNTLGYMYEQGLGMEK 200
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
N +EA ++Y +AA Y A YN + Y G G+ + A W ++AA+ G KA
Sbjct: 201 NYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKAAYIWYQKAANQGLRKA 256
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G + ++ ++A+ ++K A +G +A + G MY+ G
Sbjct: 45 GDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLGDMYY-----------------CG 87
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ Q + E+A + ++ G+ AQ LA G G N ++A +WY +AA
Sbjct: 88 NGVEQ--DYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTGVNYEKAIKWYEKAALQED 145
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMM 281
A YN Y +G+G+ + +++A KW +A+ G+ K+Q E GLG+ E
Sbjct: 146 FYAQYNLGNLYMYGKGVDIDYKRAFKWHMKASILGYEKSQNTLGYMYEQGLGM--EKNYE 203
Query: 282 KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+AV Y + A + A++ + + ++DR
Sbjct: 204 EAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDR 238
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 193 RAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+AQ L + G + + +EA +WY+++AE GY A YN Y G G+ + +A+
Sbjct: 39 KAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLGDMYYCGNGVEQDYEKAK 98
Query: 253 KWMKRAADCGHGKAQ------LEHGLG 273
++ + +A G+ AQ E GLG
Sbjct: 99 EYFEYSASQGNPDAQCNLACMYEEGLG 125
>gi|168335548|ref|ZP_02693617.1| hypothetical protein Epulo_10737 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQAAVL 166
++ G GV K+++ A+D +++ A RG A+ + G + +E + LYR +
Sbjct: 170 YQKGHGVEKDINHAMDLYIEAARRGCYDALNNLGTGFREGVFEKPNLQKERELYRVSVDQ 229
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G A+ A+ E A++L A+ G+ AQ L C G G NL
Sbjct: 230 GYIEAKRGSEQLYQNNDRIKASDEWAIELYEAAATRGYAPAQNNLGYCYRDGVGTMQNLS 289
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YL+AA G +YN CY G G+ + A ++ +AAD GH +A+
Sbjct: 290 RAYSCYLQAANQGDPEGIYNVGWCYRNGYGVEQNLGMALQYFAKAADKGHEEAK 343
>gi|86751707|ref|YP_488203.1| Sel1-like protein [Rhodopseudomonas palustris HaA2]
gi|86574735|gb|ABD09292.1| Sel1-like protein [Rhodopseudomonas palustris HaA2]
Length = 1105
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN EEA K +A+ AG V A +++ +G GV +L A R+Y++AA+ G +AM+N
Sbjct: 914 ANFEEAAKWYGRAAQAGIVPAMFRMGTLNEKGLGVKKDLDTARRFYIQAADRGNAKAMHN 973
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ + G +++ A +W ++AA+ G +Q G+ G+ E + ++ + L
Sbjct: 974 LAVLDADGGAKGANYKSAAEWFRKAAERGVADSQFNLGILYARGIGVEQNLAESFKWFSL 1033
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A G+ + ++ + ++L S A L + ++ P
Sbjct: 1034 AAAQGDADSARKRDDVAKRLDPQSLSAARLAIQTFTVEP 1072
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y++ G+G+ N +EAA+WY RAA+ G V AM+ G G+ AR++
Sbjct: 900 YEVGNRYADGKGITANFEEAAKWYGRAAQAGIVPAMFRMGTLNEKGLGVKKDLDTARRFY 959
Query: 256 KRAADCGHGKAQLEHGLGLF 275
+AAD G+ KA H L +
Sbjct: 960 IQAADRGNAKAM--HNLAVL 977
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G R+ G+G+ N ++A + + A G AM G + E + + +
Sbjct: 903 GNRYADGKGITANFEEAAKWYGRAAQAGIVPAMFRMGTL------NEKGLGVKK------ 950
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ + A + QA+ G+ +A + LA+ G N + AA W+ +AAE G
Sbjct: 951 -------DLDTARRFYIQAADRGNAKAMHNLAVLDADGGAKGANYKSAAEWFRKAAERGV 1003
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ +N + Y+ G G+ + ++ KW AA G
Sbjct: 1004 ADSQFNLGILYARGIGVEQNLAESFKWFSLAAAQG 1038
>gi|417511220|ref|ZP_12175893.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353643707|gb|EHC87836.1| tetratricopeptide repeat family protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
Length = 509
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +++ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQSIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMAS 452
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQ+ W ++AA KAQ + G+ T
Sbjct: 366 QSDRQSIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|333369899|ref|ZP_08461986.1| Sel1 domain protein [Psychrobacter sp. 1501(2011)]
gi|332969066|gb|EGK08105.1| Sel1 domain protein [Psychrobacter sp. 1501(2011)]
Length = 193
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+ L + G+ AQ+ LA +G G+ N +A WY RAA A N + Y
Sbjct: 38 AINELTSRATQGNNHAQFYLAKRYQKGEGIAKNPLKAIEWYTRAANQNVTPAQLNLGIMY 97
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE--MMKAVVYLELATRAG 294
+ GEG+ ++ +QAR W++RAA G +A + L L E + ++ A + ELA R G
Sbjct: 98 ARGEGVAVNEQQARYWLERAAKRGDNRA--SYTLALIDEKQRKLVDAYKWYELAARDG 153
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
KR++ G G+ KN KA++ + + A + T A ++ G+MY G+
Sbjct: 59 KRYQKGEGIAKNPLKAIEWYTRAANQNVTPAQLNLGIMY-----------------ARGE 101
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
A N ++A L +A+ G RA Y LAL + R L +A +WY AA G
Sbjct: 102 GVA--VNEQQARYWLERAAKRGDNRASYTLALIDEKQR----KLVDAYKWYELAARDG 153
>gi|123492730|ref|XP_001326130.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909040|gb|EAY13907.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 2444
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGDP 169
G GVR+N D A F A +G+ ++ + GLM + MDK AA + +AA+ G+
Sbjct: 2222 GIGVRRNYDTAAKYFKMAAEKGNIYSLNNIGLMLRKGTGMDKDPVAAAQYFEKAAISGEV 2281
Query: 170 AAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
A + +AV+L+ A+ G+V+A Q A G+ V NL+EAA
Sbjct: 2282 DAMYNLATMYYNGEGIKRDRRKAVQLIKMAADRGNVKAIVQFASFCKHGKLVKQNLEEAA 2341
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL---- 272
++Y A + + L G G+ + +A K +K +AD G+ A + +
Sbjct: 2342 KYYRMATQKDSAKGELMYGLMLKNGTGVDQNLDKAAKHLKHSADKGNADAMMYYAQMAQK 2401
Query: 273 GLFTEGEMMKAVVYLELATRAGETAA 298
G T+ ++++A Y ++A G T A
Sbjct: 2402 GQGTKKDLVQAAFYYKMAADKGNTRA 2427
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVL 166
+G K+G GV+K++ A F A +G+ L M + LM + I + R
Sbjct: 2179 YGIILKNGLGVKKDVILAAKYFKMSADQGNALGMNNYALMCC------SGIGVRR----- 2227
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
N + A K A+ G++ + + L L +G G+D + AA+++ +AA G
Sbjct: 2228 --------NYDTAAKYFKMAAEKGNIYSLNNIGLMLRKGTGMDKDPVAAAQYFEKAAISG 2279
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMK 282
V AMYN + Y GEG+ R+A + +K AAD G+ KA ++ G + + +
Sbjct: 2280 EVDAMYNLATMYYNGEGIKRDRRKAVQLIKMAADRGNVKAIVQFASFCKHGKLVKQNLEE 2339
Query: 283 AVVYLELATRAGETAADHVKNVILQ 307
A Y +AT+ + + ++L+
Sbjct: 2340 AAKYYRMATQKDSAKGELMYGLMLK 2364
Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 107 WGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYR 161
+G K+G GV KN A F A +G+ + M E D K+A + Y+
Sbjct: 202 YGICLKNGYGVPKNARLAAKYFQMAAEQGNPEGQNNYAWMLKNGCGIEKDSKKA-VEYYK 260
Query: 162 QAA-------------VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+A +L N EEA +L Q++ G+ AQ L G GV
Sbjct: 261 LSAEQMNTNGMNNLATMLCAGIGVEQNIEEAAQLFKQSADQGNQYAQNNYGYMLDNGIGV 320
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ ++ A+++Y +A G A +N +L + G G+P++ +A ++MK +AD G+ A+
Sbjct: 321 ERDIVLASKYYKLSASAGNNDAEFNLALLFKNGSGIPMNKYEAARYMKLSADSGNADARF 380
Query: 269 EHG 271
+G
Sbjct: 381 TYG 383
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E A + L ++ G+ AQY +A+ L G GV+ ++ EAA++Y AA+ G A +N L
Sbjct: 2086 EMAERYLRMSADNGNSEAQYNIAVMLEEGDGVNKDISEAAKYYKMAADNGNFLAQFNYGL 2145
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATR 292
G+G+ +A + K AD G + Q +G+ GL + +++ A Y +++
Sbjct: 2146 LLQKGQGVAKDLERAAYYTKLCADIGDAEGQNNYGIILKNGLGVKKDVILAAKYFKMSAD 2205
Query: 293 AG 294
G
Sbjct: 2206 QG 2207
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD-AGLMYWEM---DKKEA 155
EA R G + G GV+K K + + A + + A D A L+ + + K+
Sbjct: 51 EAHAKHRLGLLYMKGIGVKKKTQKGCELIKQSAEQNNEDAYPDYADLLLHGIHFKENKQL 110
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A++ YR +A G+ A N EA+K + G +Q AL L
Sbjct: 111 ALNYYRLSAENGNVEAMFQIGMMLKNGIGVEQNYPEALKYYKMGAEKGDPLSQNNYALML 170
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+G G N EA +++L AA A + +C G G+P + R A K+ + AA+ G
Sbjct: 171 KQGLGTKKNKAEAIKYFLLAANQNEPNAQNSYGICLKNGYGVPKNARLAAKYFQMAAEQG 230
Query: 263 HGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAGET 296
+ + Q L++G G+ E + KAV Y +L+ T
Sbjct: 231 NPEGQNNYAWMLKNGCGI--EKDSKKAVEYYKLSAEQMNT 268
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ--------------PAN 175
+ A G + A V ++ +++ A+ L R AA + AA+ A
Sbjct: 1989 RAANSGDSGAQVKLAIIKLNSGERQEALDLLRIAAENDNEAAEFMLKKFSQEDCDDEQAM 2048
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
E A A + AQY G G++ + + A R+ +A+ G A YN +
Sbjct: 2049 RETAEYFRKLADDDNDIDAQYIFGFMAQHGYGMEQDNEMAERYLRMSADNGNSEAQYNIA 2108
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELAT 291
+ G+G+ +A K+ K AAD G+ AQ +GL G ++ +A Y +L
Sbjct: 2109 VMLEEGDGVNKDISEAAKYYKMAADNGNFLAQFNYGLLLQKGQGVAKDLERAAYYTKLCA 2168
Query: 292 RAGETAADHVKNVILQQLSATSRD 315
G+ + +IL+ +D
Sbjct: 2169 DIGDAEGQNNYGIILKNGLGVKKD 2192
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 154 EAAISLYRQAAVLGDPAA---------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
E AI L+++AA G+ + EA K A+ H+ QY+LA L+
Sbjct: 601 EEAIKLFKEAADQGNAEGAYKYGMYLKEKGEYPEAAKYFGIAANLNHIEGQYELASALNA 660
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
GRGVDF+ +EA ++ AA+ + + + L G G + ++ K++ AA G+
Sbjct: 661 GRGVDFDGEEAQYYFKEAADQEHNISQFLYGLLMDTGCGGEVDQDESTKYVLMAAGNGNE 720
Query: 265 KAQ 267
+A+
Sbjct: 721 EAR 723
Score = 45.1 bits (105), Expect = 0.050, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQAAV 165
K+G G+ K+ KA++ + A + +T M + M E + +EAA L++Q+A
Sbjct: 242 LKNGCGIEKDSKKAVEYYKLSAEQMNTNGMNNLATMLCAGIGVEQNIEEAA-QLFKQSAD 300
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
G+ AQ + A K ++ AG+ A++ LAL G G+ N
Sbjct: 301 QGNQYAQNNYGYMLDNGIGVERDIVLASKYYKLSASAGNNDAEFNLALLFKNGSGIPMNK 360
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
EAAR+ +A+ G A + GEG R A ++++ A + + HG+
Sbjct: 361 YEAARYMKLSADSGNADARFTYGNMLQSGEGCTKDERIAEEYIQLAVNESADSRFISHGV 420
Query: 273 -----GLFTEGEMMKAV 284
GL + E ++ V
Sbjct: 421 FASGPGLSQQKEAIRGV 437
Score = 43.9 bits (102), Expect = 0.097, Method: Composition-based stats.
Identities = 74/331 (22%), Positives = 122/331 (36%), Gaps = 53/331 (16%)
Query: 15 FTALQFPITEKDNRRPELTASARKARIKRRSRFSCSRSIKSTEGHDFASLPFDVLNKIAA 74
F A IT+ N +PE+TA R I++ R R+ S + L LN
Sbjct: 1957 FDASNLSITQDINMQPEITAETRSMEIEKVHR----RAANSGDSGAQVKLAIIKLNSGER 2012
Query: 75 SFTLPQLR--------AASLVCKSWN----DALRPLREAMVLLR--------------WG 108
L LR AA + K ++ D + +RE R +G
Sbjct: 2013 QEALDLLRIAAENDNEAAEFMLKKFSQEDCDDEQAMRETAEYFRKLADDDNDIDAQYIFG 2072
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
+HG G+ ++ + A A G++ A + +M E D IS
Sbjct: 2073 FMAQHGYGMEQDNEMAERYLRMSADNGNSEAQYNIAVMLEEGDGVNKDIS---------- 2122
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
EA K A+ G+ AQ+ L L +G+GV +L+ AA + A+ G
Sbjct: 2123 ---------EAAKYYKMAADNGNFLAQFNYGLLLQKGQGVAKDLERAAYYTKLCADIGDA 2173
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAV 284
N + G G+ A K+ K +AD G+ + L G+ A
Sbjct: 2174 EGQNNYGIILKNGLGVKKDVILAAKYFKMSADQGNALGMNNYALMCCSGIGVRRNYDTAA 2233
Query: 285 VYLELATRAGETAADHVKNVILQQLSATSRD 315
Y ++A G + + ++L++ + +D
Sbjct: 2234 KYFKMAAEKGNIYSLNNIGLMLRKGTGMDKD 2264
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q EEA+KL +A+ G+ Y+ + L + +G EAA+++ AA ++
Sbjct: 596 QGKTPEEAIKLFKEAADQGNAEGAYKYGMYL-KEKG---EYPEAAKYFGIAANLNHIEGQ 651
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
Y + + G G+ +A+ + K AAD H +Q +GL G E + ++ Y+
Sbjct: 652 YELASALNAGRGVDFDGEEAQYYFKEAADQEHNISQFLYGLLMDTGCGGEVDQDESTKYV 711
Query: 288 ELATRAG-ETAADHV 301
+A G E A DH+
Sbjct: 712 LMAAGNGNEEARDHL 726
>gi|168233787|ref|ZP_02658845.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194471697|ref|ZP_03077681.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194458061|gb|EDX46900.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205332150|gb|EDZ18914.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 509
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA 259
GRGV N + A +WYL+AAE G+ A Y+ G G+P ++QA W A+
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRHGVPKDNKQAYIWYYMAS 452
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+P +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEG 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
PA++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PADSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 149
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 150 YRKAASPTND--AGVVRGQGSASS 171
>gi|408532397|emb|CCK30571.1| hypothetical protein BN159_6192 [Streptomyces davawensis JCM 4913]
Length = 1500
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA--------NAEEA 179
F A GS AMVD G + E + E A R+AA GD A + + ++A
Sbjct: 668 FELAVAAGSVAAMVDLGRLL-EESEPETAREWLRRAADAGDDEAMNSLGTLLYTQDPDQA 726
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+L QA+ G++ A L L L G G + EA RW+ +AAE G AM N +
Sbjct: 727 RELFRQAAGTGNLLAMNNLGLILTEGGG---DAAEAERWFRQAAEEGNEEAMLNLGTVLA 783
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAAD 299
H A W++RAA+ GH +A G+ L +G A + A AG T D
Sbjct: 784 RRR----DHTGALHWLERAAEAGHPEAMRNLGIELNVDGLTQGARYWFRRAVEAGNT--D 837
Query: 300 HVKNVILQ 307
+ N+ +Q
Sbjct: 838 ALLNLAVQ 845
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 119 KNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-AISLYRQAAV---------LGD 168
++ D+A + F + A G+ LAM + GL+ E A A +RQAA LG
Sbjct: 721 QDPDQARELFRQAAGTGNLLAMNNLGLILTEGGGDAAEAERWFRQAAEEGNEEAMLNLGT 780
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
A+ + A+ L +A+ AGH A L + L+ VD Q A W+ RA E G
Sbjct: 781 VLARRRDHTGALHWLERAAEAGHPEAMRNLGIELN----VDGLTQGARYWFRRAVEAGNT 836
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLE 288
A+ N ++ + G R W++R + GHG G EG+ A+ Y
Sbjct: 837 DALLNLAVQAAIQGGA----DGYRTWLERGVEAGHGMCMYALGDLESQEGDEEAALRYYT 892
Query: 289 LATRAGETA 297
A AGE +
Sbjct: 893 QAAEAGEPS 901
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 130 KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANA---------EEAV 180
+ A RG+ A+ + G++ + D AA +RQAA LGDP A A + A
Sbjct: 1355 QAAERGNAAALYNLGVLVMDEDPP-AADRYWRQAADLGDPDAMNNVALRLEDEDSLDAAE 1413
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+LL +A+ G+V A L L R +D EA W+ RAAE G AMYN
Sbjct: 1414 ELLERAAATGNVNAMNSLGSLLSRLDRID----EAVDWWERAAEQGDANAMYN 1462
>gi|170035069|ref|XP_001845394.1| Sel1l protein [Culex quinquefasciatus]
gi|167876852|gb|EDS40235.1| Sel1l protein [Culex quinquefasciatus]
Length = 781
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ GRG++ + KAL F + A G+ +AM G +Y E + A +++AA
Sbjct: 356 YQGGRGIQLDHQKALQYFSQAANAGNAVAMAFLGKIYLEGSDNIKADNDTAFKYFKKAAD 415
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
LG+P Q P + +A+K QA+ G V Q QL G GV +
Sbjct: 416 LGNPVGQSGLGVMFLHGKGVPKDTVKALKYFTQAADQGWVDGQLQLGNMYFSGTGVKRDF 475
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ A ++Y A++ G+V A Y+ ++ G G+ S A + K A+ G
Sbjct: 476 KLANKYYNLASQSGHVLAFYHLGQMHAVGLGMMRSCPTAVELFKNVAERG 525
>gi|293611220|ref|ZP_06693518.1| hypothetical protein HMPREF0013_03381 [Acinetobacter sp. SH024]
gi|292826471|gb|EFF84838.1| hypothetical protein HMPREF0013_03381 [Acinetobacter sp. SH024]
Length = 230
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GV K+ +A D F K AA+ A + G++Y D+ E Y +A
Sbjct: 83 GMMYYTGTGVEKDAKRAFDYFTKAAAKDHAKAQYNLGVLY---DRGEGTAQDYGKA---- 135
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A+ G+ A+Y LA +G GV + ++A +WY +AAE
Sbjct: 136 ------------FEWFSRAAKQGYPPAEYNLAHLYKKGHGVSQSDEQALKWYTKAAEHNE 183
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A YN + Y GEG P + + A+KW + AAD G A+
Sbjct: 184 SDAQYNLAQMYLNGEGTPKNLQLAKKWFQHAADAGDSDAK 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 19/153 (12%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA 174
+GV KN ++A GS A G+MY Y V D
Sbjct: 54 QGVVKNYEQAFKWLTVADQNGSMGAKYSLGMMY------------YTGTGVEKD------ 95
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
A+ A +A+ H +AQY L + RG G + +A W+ RAA+ GY A YN
Sbjct: 96 -AKRAFDYFTKAAAKDHAKAQYNLGVLYDRGEGTAQDYGKAFEWFSRAAKQGYPPAEYNL 154
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y G G+ S QA KW +AA+ AQ
Sbjct: 155 AHLYKKGHGVSQSDEQALKWYTKAAEHNESDAQ 187
>gi|237746289|ref|ZP_04576769.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377640|gb|EEO27731.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 293
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+AM L+ G + G GV KN + A +LK A GS +A + GL Y
Sbjct: 76 KAMTLI--GYMYDEGLGVEKNPETANTWYLKAAELGSPVAQFNLGLSY------------ 121
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
G + P N EAVK +A+ + +A+ ++ G GV + EA +WY
Sbjct: 122 -----EYG--SGTPKNMAEAVKWFRKAAEQKYAKAESKMWYLTVTGNGVKKDYHEAMKWY 174
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
RAAE G A + L Y GEG+ +A ++ A+ G+G+AQL
Sbjct: 175 RRAAEHGDHGAYADIGLFYDKGEGVRKDPNRAVQYYILGAEKGNGRAQL 223
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+E++ L + H +A + G GV+ N + A WYL+AAE G A +N L
Sbjct: 60 QESMSYLMKPDTVTHPKAMTLIGYMYDEGLGVEKNPETANTWYLKAAELGSPVAQFNLGL 119
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y +G G P + +A KW ++AA+ + KA+
Sbjct: 120 SYEYGSGTPKNMAEAVKWFRKAAEQKYAKAE 150
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N E A +A+ G AQ+ L L G G N+ EA +W+ +AAE Y +A
Sbjct: 94 NPETANTWYLKAAELGSPVAQFNLGLSYEYGSGTPKNMAEAVKWFRKAAEQKYAKAESKM 153
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVYLEL 289
G G+ + +A KW +RAA+ G A + GL + +GE + +AV Y L
Sbjct: 154 WYLTVTGNGVKKDYHEAMKWYRRAAEHGDHGAYADIGL-FYDKGEGVRKDPNRAVQYYIL 212
Query: 290 ATRAG 294
G
Sbjct: 213 GAEKG 217
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQP 173
G GV+K+ +A+ + + A G A D GL Y DK E V DP
Sbjct: 160 GNGVKKDYHEAMKWYRRAAEHGDHGAYADIGLFY---DKGEG---------VRKDP---- 203
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AV+ + G+ RAQ LA +G G+ + + A WY AA+ G V AM
Sbjct: 204 ---NRAVQYYILGAEKGNGRAQLFLADSYAKGNGIRQDNERALYWYREAAKNGNVMAMQE 260
Query: 234 TSLCYSFGE-GLPLSHRQARKWMKRA 258
+ Y+ G G+ + ++++W++ A
Sbjct: 261 LAAIYAKGRLGVRKNEAESQRWLEMA 286
>gi|338708084|ref|YP_004662285.1| Sel1 domain-containing protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294888|gb|AEI37995.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. pomaceae ATCC 29192]
Length = 593
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ + K+ KA+ F K A +G A + MY + + K A L+++A
Sbjct: 347 GVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGILQDKTKAFQLFQKA 406
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AAQ P ++ +A +L +A+ G+ AQY LA G+ +
Sbjct: 407 ADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQLFQKAADQGYAEAQYHLATMYRTGKDLPQ 466
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
+ ++A Y +AA Y A YN + Y G+ +P +A + ++AA+ G +AQ
Sbjct: 467 DKKKAFELYQKAAAQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNL 526
Query: 271 GLGLFTEGE 279
++ +GE
Sbjct: 527 A-NMYVKGE 534
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P N +EA + +A+ + +AQY LA G + + ++A YL+AA G A Y
Sbjct: 69 PKNMKEAFQWYQKAADQNYQKAQYNLASMYEYGEYLPQDKKKAFELYLKAANQGLSAAQY 128
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMM-----KAVVY 286
Y G +P ++R+A +W+++AAD G G+A E+ LG L+ GE++ KA +
Sbjct: 129 KIGTMYYEGSAVPKNNRKAIEWIRKAADNGLGQA--EYALGVLYYTGEILPQDKNKAAYF 186
Query: 287 LELATRAGETAADH 300
+ A G+ ++
Sbjct: 187 YKKAEIQGDDTTEY 200
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
Q N+ +L++A+ G+ AQ+ LA G+ + N++EA +WY +AA+ Y +A
Sbjct: 32 QSENSTTDNAVLFKAAQRGNAEAQFLLAKKYSLGKEIPKNMKEAFQWYQKAADQNYQKAQ 91
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMM-----KAVVY 286
YN + Y +GE LP ++A + +AA+ G AQ + G ++ EG + KA+ +
Sbjct: 92 YNLASMYEYGEYLPQDKKKAFELYLKAANQGLSAAQYKIGT-MYYEGSAVPKNNRKAIEW 150
Query: 287 LELATRAGETAADHVKNVI 305
+ A G A++ V+
Sbjct: 151 IRKAADNGLGQAEYALGVL 169
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 30/241 (12%)
Query: 82 RAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMV 141
+A L KS N + + +L W G G+ +N +AL F K A + + A
Sbjct: 218 KAFQLFQKSANQGNAEAQNGLAVLYW-----TGEGISQNKAQALQLFQKAADQDNAEAQN 272
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
+ +Y D +L D A +A +L +A+ G+ AQY LA
Sbjct: 273 NLAKIYRGGD------------GILKDSA-------KAFQLFQKAADQGYAEAQYHLATM 313
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G G+ + +A Y +AA Y A YN + Y G+ +P +A + ++AA+
Sbjct: 314 YLTGEGIPQDKTKAFELYQKAAAQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQ 373
Query: 262 GHGKAQLEHGLGLFTEGEMM-----KAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
G +AQ ++ +GE + KA + A G +AA + V+ + + +D
Sbjct: 374 GDPEAQFNLA-NMYVKGEGILQDKTKAFQLFQKAADQGNSAAQNNLAVMYLEGKSIPKDS 432
Query: 317 A 317
A
Sbjct: 433 A 433
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 27/222 (12%)
Query: 78 LPQ--LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARG 135
LPQ +A L K+ N L + + G + G V KN KA++ K A G
Sbjct: 104 LPQDKKKAFELYLKAANQGLSAAQ-----YKIGTMYYEGSAVPKNNRKAIEWIRKAADNG 158
Query: 136 STLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ-------------PANAE 177
A G++Y+ DK +AA Y++A + GD + P +
Sbjct: 159 LGQAEYALGVLYYTGEILPQDKNKAAY-FYKKAEIQGDDTTEYALAITYYSGIKAPQDIT 217
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A +L +++ G+ AQ LA+ G G+ N +A + + +AA+ A N +
Sbjct: 218 KAFQLFQKSANQGNAEAQNGLAVLYWTGEGISQNKAQALQLFQKAADQDNAEAQNNLAKI 277
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
Y G+G+ +A + ++AAD G+ +AQ H ++ GE
Sbjct: 278 YRGGDGILKDSAKAFQLFQKAADQGYAEAQY-HLATMYLTGE 318
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLG 167
G+ + K+ KA F K A +G A MY DKK+A LY++AA
Sbjct: 424 EGKSIPKDSAKAFQLFQKAADQGYAEAQYHLATMYRTGKDLPQDKKKA-FELYQKAAAQD 482
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
AQ P + +AV +A+ G AQ+ LA +G G+ + +
Sbjct: 483 YATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGIPQDKTK 542
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
A + + +AAE G RA Y L Y G G+P +A + ++AAD G
Sbjct: 543 AFQLFQKAAEQGLARAQYILGLMYRDGIGIPQDKTKAFQLFQKAADQG 590
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAA 164
K ++ G G+ K+ KA F K A +G A MY + K A LY++AA
Sbjct: 276 KIYRGGDGILKDSAKAFQLFQKAADQGYAEAQYHLATMYLTGEGIPQDKTKAFELYQKAA 335
Query: 165 VLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
AQ P + +AV +A+ G AQ+ LA +G G+ +
Sbjct: 336 AQDYATAQYNLGVMYLEGKDIPKDTAKAVLFFQKAAEQGDPEAQFNLANMYVKGEGILQD 395
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A + + +AA+ G A N ++ Y G+ +P +A + ++AAD G+ +AQ
Sbjct: 396 KTKAFQLFQKAADQGNSAAQNNLAVMYLEGKSIPKDSAKAFQLFQKAADQGYAEAQ 451
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 64 LPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDK 123
LPF +L K +F + V + A R EA LL K++ G+ + KN+ +
Sbjct: 21 LPFSLLAKT--NFQSENSTTDNAVL--FKAAQRGNAEAQFLL--AKKYSLGKEIPKNMKE 74
Query: 124 ALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQ------ 172
A + K A + A + MY DKK+A LY +AA G AAQ
Sbjct: 75 AFQWYQKAADQNYQKAQYNLASMYEYGEYLPQDKKKA-FELYLKAANQGLSAAQYKIGTM 133
Query: 173 -------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
P N +A++ + +A+ G +A+Y L + + G + + +AA +Y +A
Sbjct: 134 YYEGSAVPKNNRKAIEWIRKAADNGLGQAEYALGVLYYTGEILPQDKNKAAYFYKKAEIQ 193
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE 279
G Y ++ Y G P +A + +++A+ G+ +AQ +GL L+ GE
Sbjct: 194 GDDTTEYALAITYYSGIKAPQDITKAFQLFQKSANQGNAEAQ--NGLAVLYWTGE 246
>gi|348676175|gb|EGZ15993.1| hypothetical protein PHYSODRAFT_354845 [Phytophthora sojae]
Length = 327
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKE-AAISLYRQAAVLGD 168
+G G RKN KA + F K A G A ++ MY DK E A++ +AA GD
Sbjct: 140 NGDGTRKNEKKAFELFKKCAESGIPPAYMNVSNMYMSGTGTDKNELEALTWLIKAADAGD 199
Query: 169 PAAQP--------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
P A+ N AV+ A+ G V AQ+ L G GV + +
Sbjct: 200 PTAKSRLGEYYSLGKGGVQKNQARAVQYYKDAATTGIVTAQFNLGYLFLTGDGVPKDPLQ 259
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAA 259
A + +AAE G+V AM N + Y G G +P ARKW++ AA
Sbjct: 260 AEALFRKAAEKGFVMAMVNLAQMYRTGYGKVPKDLETARKWLELAA 305
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
+A A K + + AGH + A L G G N ++A + + AE G A N
Sbjct: 111 DAASATKYFKELAAAGHGWGAFAYADALSNGDGTRKNEKKAFELFKKCAESGIPPAYMNV 170
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
S Y G G + +A W+ +AAD G A+
Sbjct: 171 SNMYMSGTGTDKNELEALTWLIKAADAGDPTAK 203
>gi|344343559|ref|ZP_08774427.1| Sel1 domain protein repeat-containing protein [Marichromatium
purpuratum 984]
gi|343804982|gb|EGV22880.1| Sel1 domain protein repeat-containing protein [Marichromatium
purpuratum 984]
Length = 276
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 123 KALDSFL--KGAARGSTLAMVDAGLMYWEMDKKE--AAISLYR---QAAVLGDPAAQP-- 173
+++D FL + A G L M+ G+ +W ++ + L R + VL A +P
Sbjct: 42 QSIDYFLIQQWAMAGIALVMI-GGVGWWAALRQSDGGVVELERSRSEDPVLAVLAPEPYG 100
Query: 174 -ANAEEAVKLLYQASIAGHVRAQYQLALCL---HRGRGVDFNLQEAARWYLRAAEGGYVR 229
A A + +LL A+ G AQYQL L + H RG L EAA W +AAE +VR
Sbjct: 101 FAAAYDKPELL-TAADTGDAEAQYQLGLAIVQRHWERGEQRRLGEAADWIAKAAEQDHVR 159
Query: 230 AMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT----EGEMMKAVV 285
A Y G G+ + A W +RAA G +A G L T E +++A V
Sbjct: 160 AQLVMGGLYEKGRGVIQDYESALAWYRRAATQGDPQAMARLGRMLRTGRGVEKNLVEAYV 219
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDRA 317
+L LA+ G+T A+ ++ + + LS DRA
Sbjct: 220 WLNLASARGDTHAEIDRDRLRRMLSTEEIDRA 251
>gi|409912901|ref|YP_006891366.1| hypothetical protein KN400_2395 [Geobacter sulfurreducens KN400]
gi|298506484|gb|ADI85207.1| TPR-related repeat protein [Geobacter sulfurreducens KN400]
Length = 252
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D + P EA + + A+ GHVRAQY L H G GV + AARW +AA GG
Sbjct: 59 DGSGAPRKPTEAARYMKMAAERGHVRAQYYLGTFYHEGTGVKRDTAAAARWIGKAAAGGD 118
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A Y + G+G+P+ +A +W+ +A+ G+
Sbjct: 119 AEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGN 154
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G +A ++LAL G G EAAR+ AAE G+VRA Y Y G G+
Sbjct: 45 GDAKAAFRLALMHLDGSGAPRKPTEAARYMKMAAERGHVRAQYYLGTFYHEGTGVKRDTA 104
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFT-EG---EMMKAVVYLELATRAGETAADHVKNVI 305
A +W+ +AA G +AQ +G+ L + +G + ++A+ +L A+R G A V
Sbjct: 105 AAARWIGKAAAGGDAEAQYAYGMVLLSGDGVPVDKVRAIEWLGKASRQGNEGARDV---- 160
Query: 306 LQQLSA 311
LQ+L A
Sbjct: 161 LQELVA 166
>gi|429749503|ref|ZP_19282622.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429168040|gb|EKY09901.1| Sel1 repeat protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 783
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
++AV L + + +G +AQYQL C G+GV + ++AA W+ +AA GG V A +L
Sbjct: 54 QDAVVWLEKVAESGDAKAQYQLGQCYFTGQGVAKSEEKAAEWFEKAANGGNVDAQRQLAL 113
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
CY G+G+ S + +W+++ AD + QL
Sbjct: 114 CYRDGKGVAQSTEKYYQWIEKNADKESPEVQL 145
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+G +K+ +KA++ F K AA+G+ A G Y+ G
Sbjct: 217 GMAYLEGKGGQKSEEKAIEWFEKAAAKGNPDAAYKLGNYYF-----------------YG 259
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ P ++A++ +A+I G+ AQ QL++CL+ G G + ++A W ++
Sbjct: 260 NSPLIPKFYKKAIEYYTRAAIKGNADAQRQLSVCLYNGIGDAQSFRDAFNWVYKSVNSSP 319
Query: 228 VRAMYNT-SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG--EMMKAV 284
N +CY+ G G S +QA ++AAD G AQ G L E ++ K
Sbjct: 320 TPVSENNLGVCYATGNGTRPSPQQAIDLFQKAADEGDVMAQYNLGAILLEEATLDVRKGF 379
Query: 285 VYLELA 290
YLE A
Sbjct: 380 EYLEKA 385
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 180 VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+K L + + G V+AQ +LA G+GV + Q+A W + AE G +A Y CY
Sbjct: 21 IKKLTKLAEKGDVQAQAELADAYFNGKGVKRSYQDAVVWLEKVAESGDAKAQYQLGQCYF 80
Query: 240 FGEGLPLSHRQARKWMKRAADCGHGKAQ 267
G+G+ S +A +W ++AA+ G+ AQ
Sbjct: 81 TGQGVAKSEEKAAEWFEKAANGGNVDAQ 108
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
++LA + G G D + + AA Y AA GY A Y CY GEGL S +A W
Sbjct: 703 FKLANYYYNGTGTDRSFERAAELYKEAARQGYALAQYRLGHCYFHGEGLKQSDSRAADWF 762
Query: 256 KRAADCGH 263
++A D G
Sbjct: 763 EQACDNGE 770
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--WEMDKKEAAISLY 160
V L K ++ G GV K+L KA K AA+G+ +DA + W +
Sbjct: 143 VQLALAKAYQTGDGVAKDLQKARSWAQKAAAKGN----LDAEYLVASWAYE--------- 189
Query: 161 RQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYL 220
A P N+ +A++ L + + G+ AQY + + G+G + ++A W+
Sbjct: 190 ----------AMP-NSGDALQQLMKVAEKGNPDAQYTIGMAYLEGKGGQKSEEKAIEWFE 238
Query: 221 RAAEGGYVRAMYNTSLCYSFGEG--LPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
+AA G A Y Y +G +P +++A ++ RAA G+ AQ + + L+
Sbjct: 239 KAAAKGNPDAAYKLGNYYFYGNSPLIPKFYKKAIEYYTRAAIKGNADAQRQLSVCLYN 296
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 19/186 (10%)
Query: 87 VCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM 146
V KS N + P+ E + G + G G R + +A+D F K A G +A + G +
Sbjct: 311 VYKSVNSSPTPVSENNL----GVCYATGNGTRPSPQQAIDLFQKAADEGDVMAQYNLGAI 366
Query: 147 YWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAG------HVRAQYQLAL 200
E EA + + + L A++ N A+K L G H RA
Sbjct: 367 LLE----EATLDVRKGFEYLEKAASK--NNLLALKKLGDLHYNGKYTNISHTRA---FEY 417
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
L + E+ ++ + Y +Y S CY+ G+G+ S + A +W +AA+
Sbjct: 418 YLKAAQKEPLQQNESLEYFYQQENEAYAEVLYLLSQCYANGKGVKKSEKDAAEWAVKAAN 477
Query: 261 CGHGKA 266
G+ A
Sbjct: 478 LGNQTA 483
>gi|420345856|ref|ZP_14847285.1| sel1 repeat family protein [Shigella boydii 965-58]
gi|391275908|gb|EIQ34691.1| sel1 repeat family protein [Shigella boydii 965-58]
Length = 325
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAIVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLTAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E AI Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAIVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
N A WYL++A+ G A + + Y+ GEG+ ++QA W +AA
Sbjct: 186 QNETLTAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAA 235
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLTAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +A+V+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAIVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|374260762|ref|ZP_09619356.1| TPR repeat-containing protein [Legionella drancourtii LLAP12]
gi|363538928|gb|EHL32328.1| TPR repeat-containing protein [Legionella drancourtii LLAP12]
Length = 376
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EAM LL G+ +++G GV KN +AL+ + K A + + LA + G +Y
Sbjct: 48 EAMYLL--GRMYQYGEGVAKNQTEALNWYQKAAEKNNALAQLSLGFLY------------ 93
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
LG Q N EA +A+ G+ AQ + L G GV N + A +W+
Sbjct: 94 -----DLGAGVKQ--NYTEAFHWYMKAAKQGNPIAQRNIGLMYSTGDGVKANNKMALQWF 146
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
++A+ GY RA N + Y G G P +A W ++
Sbjct: 147 NKSAKQGYSRAQVNLAYAYIMGIGTPKDVNKALYWYQK 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EA+ +A+ + AQ L G GV N EA WY++AA+ G A N
Sbjct: 66 NQTEALNWYQKAAEKNNALAQLSLGFLYDLGAGVKQNYTEAFHWYMKAAKQGNPIAQRNI 125
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE----HGLGLFTEGEMMKAVVYLE 288
L YS G+G+ +++ A +W ++A G+ +AQ+ + +G+ T ++ KA+ + +
Sbjct: 126 GLMYSTGDGVKANNKMALQWFNKSAKQGYSRAQVNLAYAYIMGIGTPKDVNKALYWYQ 183
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
A+ L G + G GV++N +A ++K A +G+ +A + GLMY
Sbjct: 81 NNALAQLSLGFLYDLGAGVKQNYTEAFHWYMKAAKQGNPIAQRNIGLMY----------- 129
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
GD AN + A++ +++ G+ RAQ LA G G ++ +A W
Sbjct: 130 ------STGDGV--KANNKMALQWFNKSAKQGYSRAQVNLAYAYIMGIGTPKDVNKALYW 181
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADCGHGKA----QLEHGLG 273
Y +AA G +A Y+ L Y+ E G+ A W +AA+ GH +A + G
Sbjct: 182 YQKAAAQGDAKAAYSLGLLYTGQEPGIVADDSAAFNWFAQAANQGHIRAANYLAFYYLKG 241
Query: 274 LFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDR 316
+ + KA + ++A +AGE A +L L+ T D+
Sbjct: 242 YGVQADPKKAAYWYQIAAQAGEADAQAELGQLL--LTGTGVDK 282
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
V+G A + + A L Q++ G+ A Y L G GV N EA WY +AAE
Sbjct: 20 VVGFSAFENGDYTTAYPHLMQSARDGNPEAMYLLGRMYQYGEGVAKNQTEALNWYQKAAE 79
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKA 283
A + Y G G+ ++ +A W +AA G+ AQ GL +++ G+ +KA
Sbjct: 80 KNNALAQLSLGFLYDLGAGVKQNYTEAFHWYMKAAKQGNPIAQRNIGL-MYSTGDGVKA 137
>gi|374999509|ref|YP_004975597.1| hypothetical protein AZOLI_p60012 [Azospirillum lipoferum 4B]
gi|357428480|emb|CBS91437.1| conserved protein of unknown function [Azospirillum lipoferum 4B]
Length = 450
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 32/249 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AISLYRQAAVL 166
+ +G+GV +++++AL + + A +G A + ++Y EA A + YRQAA
Sbjct: 201 YANGQGVERDIEQALAWYERAAEQGFVNAQLALAIVYEHGTGVEADPARAAAFYRQAAEQ 260
Query: 167 GDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G P AQ P + E +K ++ G+V AQ+ L L G +
Sbjct: 261 GHPVAQVNLGLLYARGQGVPKDYRETLKWCRLSAEQGNVNAQFNLGLIHSNGLTGSPDYA 320
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG 273
EAA WY +AA G V A N L + G G + W+++AA GH A G
Sbjct: 321 EAAVWYRKAAMQGNVGAQVNLGLLLAHGWGGRPELVEGVDWLRKAAAQGHSGAMSNLGAL 380
Query: 274 LFTEGEM----MKAVVYLELAT--------RAGETAADHVKNVILQQLSATSRDRAMLVV 321
T ++A V+ +A R G A H + L++ R +A +++
Sbjct: 381 YATRDSKAYNPIQAYVWYIMAAASTQPGPEREGLEAKAHE---LGAGLTSEDRHKAQVIM 437
Query: 322 DSWRAMPSL 330
+ W+ P L
Sbjct: 438 EEWKKNPKL 446
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM--YWEMDKKEAAIS--LYRQAAVL 166
+ +G G+ ++ +AL + A G A GL+ + + ++ A++ YR++A
Sbjct: 129 YPNGLGIGPDIAQALHWYRLAAEAGHAEAQHHIGLLHAFGQGVPQDHAVAAEWYRKSAEQ 188
Query: 167 GDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G AQ A + E+A+ +A+ G V AQ LA+ G GV+ +
Sbjct: 189 GYAVAQHALASLYANGQGVERDIEQALAWYERAAEQGFVNAQLALAIVYEHGTGVEADPA 248
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL- 272
AA +Y +AAE G+ A N L Y+ G+G+P +R+ KW + +A+ G+ AQ GL
Sbjct: 249 RAAAFYRQAAEQGHPVAQVNLGLLYARGQGVPKDYRETLKWCRLSAEQGNVNAQFNLGLI 308
Query: 273 ---GLFTEGEMMKAVVYLELATRAGETAA 298
GL + +A V+ A G A
Sbjct: 309 HSNGLTGSPDYAEAAVWYRKAAMQGNVGA 337
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 97 PLRE---AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
PL E A R G+ + G+GV ++ A F K A +G T A L Y
Sbjct: 40 PLAERGHAEAQYRMGQLYARGQGVVRDFGDAAHWFRKAAEQGHTEARFSLALCY------ 93
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFN 211
G+ AAQ E A+ + + +++ A+ LAL G G+ +
Sbjct: 94 -----------ANGEGAAQ----ESALPVRWYKTVSKTNPAAAEANLALLYPNGLGIGPD 138
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
+ +A WY AAE G+ A ++ L ++FG+G+P H A +W +++A+ G+ AQ H
Sbjct: 139 IAQALHWYRLAAEAGHAEAQHHIGLLHAFGQGVPQDHAVAAEWYRKSAEQGYAVAQ--HA 196
Query: 272 L------GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
L G E ++ +A+ + E A G A ++ + + D A
Sbjct: 197 LASLYANGQGVERDIEQALAWYERAAEQGFVNAQLALAIVYEHGTGVEADPA 248
>gi|335041823|ref|ZP_08534850.1| sel1 domain protein repeat-containing protein [Methylophaga
aminisulfidivorans MP]
gi|333788437|gb|EGL54319.1| sel1 domain protein repeat-containing protein [Methylophaga
aminisulfidivorans MP]
Length = 356
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 30/278 (10%)
Query: 53 IKSTEGHDFASLPFDVLNKIAASFTL--PQLRAASLVCKSWNDALRPLREAMVLLRWGKR 110
I + +GHD A+ +L + Q +A L KS A R A+ G
Sbjct: 84 IAAQKGHDEAAYALGMLYYTGNEPDVKRDQKKAFELFKKS---AERG--SAVAQFNVGAM 138
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+G+GV K+L A D F K +G + A + GL+Y + G
Sbjct: 139 LMNGQGVEKDLKAAADWFEKAGEQGHSQAQFNLGLLY-----------------LSGSGV 181
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
Q + + A +++ +G+ AQY++A L G G + +A W+L+A E V A
Sbjct: 182 KQ--DTKRAYSWFKRSAESGYPNAQYRVAKMLFDGDGAALDHVQAKSWFLKAQENNSVEA 239
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVY 286
+ G G + AR W AA AQ GL G + +++A +
Sbjct: 240 AFMLGFMSYLGLGGSQDNLMARHWFDVAAKGWDRNAQFYLGLMNQRGDGEQKNLLEAYKW 299
Query: 287 LELATRAGETAADHVKNVILQQLSATSRDRAMLVVDSW 324
+LA +G A + ++ + LSA R +A + W
Sbjct: 300 FDLAASSGHEDAHYYRSAVAAALSAEQRQQASQLAQQW 337
>gi|303289691|ref|XP_003064133.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454449|gb|EEH51755.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 17/188 (9%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG-LMY 147
+ W D A + G + G+GV KN+ A + +LK A +G++ A G L+
Sbjct: 162 RKWFDKAAAQGNADAMNNLGALYYKGQGVEKNISTAAEWYLKAAMKGNSHAQYTYGALLD 221
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRA 194
+M++ E A+ Y +AA GD A N A + +A+ G A
Sbjct: 222 IDMNQHEDAMKWYLKAAAQGDANAMNNLALLYFNGKGVERNVSTAAEWFLKAASKGDREA 281
Query: 195 QYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
Q L G ++A +WY++AA G+ A +N Y G+G+ + AR+W
Sbjct: 282 QCNYGNILFEEMG---QYEDAMKWYMKAAAQGHAEATHNIGTLYFRGDGVEQNKWTAREW 338
Query: 255 MKRAADCG 262
++AA G
Sbjct: 339 WEKAAAYG 346
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 100 EAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAIS 158
EA + W F HG GV K+ + +K A G A G Y +M +AA
Sbjct: 106 EAARTIAW--HFFHGTDGVEKDTELHFRWLVKAAELGDAKAQCRIGSEYNQMSNYDAARK 163
Query: 159 LYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
+ +AA G+ A N A + +A++ G+ AQY L
Sbjct: 164 WFDKAAAQGNADAMNNLGALYYKGQGVEKNISTAAEWYLKAAMKGNSHAQYTYGALLD-- 221
Query: 206 RGVDFNLQE-AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
+D N E A +WYL+AA G AM N +L Y G+G+ + A +W +AA G
Sbjct: 222 --IDMNQHEDAMKWYLKAAAQGDANAMNNLALLYFNGKGVERNVSTAAEWFLKAASKGDR 279
Query: 265 KAQLEHGLGLFTE-GEMMKAVVYLELATRAGETAADH 300
+AQ +G LF E G+ A+ + A G A H
Sbjct: 280 EAQCNYGNILFEEMGQYEDAMKWYMKAAAQGHAEATH 316
>gi|422024059|ref|ZP_16370560.1| hypothetical protein OO7_16163 [Providencia sneebia DSM 19967]
gi|414091459|gb|EKT53144.1| hypothetical protein OO7_16163 [Providencia sneebia DSM 19967]
Length = 494
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 117 VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE------MDKKEAAISLYRQAA------ 164
++ NL + LK A G AM+D GL Y E +D K+A + +++A+
Sbjct: 42 LQNNLPVEFQNRLKLAQAGDVAAMIDIGLAYAEGTDFLSVDDKQA-YTWFKKASDLNNTD 100
Query: 165 ---VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLR 221
LG A N EEA + + + +G QY L G GV+ N ++A WY+
Sbjct: 101 GDYYLGVLAQHQDNYEEAARWYRKGAESGDAYCQYALGYLYENGLGVEQNYKQAKAWYVE 160
Query: 222 AAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+AE G + + Y G G + +++AR W +++A+ G
Sbjct: 161 SAEQGQASGQFALGMFYHDGIGGDVDYQKARMWYEKSAELG 201
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
Query: 144 GLMYWEMDKKEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAG 190
G++ D E A YR+ A GD Q A N ++A +++ G
Sbjct: 106 GVLAQHQDNYEEAARWYRKGAESGDAYCQYALGYLYENGLGVEQNYKQAKAWYVESAEQG 165
Query: 191 HVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQ 250
Q+ L + H G G D + Q+A WY ++AE G ++ N ++ Y G+G+ ++
Sbjct: 166 QASGQFALGMFYHDGIGGDVDYQKARMWYEKSAELGVAASLNNLAVMYEKGQGVREDGQK 225
Query: 251 ARKWMKRAADCGHGKAQLEHG 271
A +AA+ G AQ G
Sbjct: 226 AADLYHQAANMGSSTAQANMG 246
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GVR++ KA D + + A GS+ A + G Y Q
Sbjct: 213 YEKGQGVREDGQKAADLYHQAANMGSSTAQANMGKFY------HNGTEFLEQ-------- 258
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
N +++ +A++ + AQY LA G+G+ ++ A WY +A G A
Sbjct: 259 ----NDYQSIYWYKRAALQENEEAQYALAQGYETGKGIGQDVNMAFEWYQKAGSNGSAAA 314
Query: 231 MYNTSLCYSFGEG-LPLSHRQARKWMKRAADCGHGKAQL 268
+ Y G G +P + ++A W A+ +AQ+
Sbjct: 315 GMKVAEYYEKGIGDIPPNQQKAIDWYLSMAEANVREAQV 353
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G +++G GV +N +A +++ A +G G+ Y ++D ++A + Y +
Sbjct: 138 GYLYENGLGVEQNYKQAKAWYVESAEQGQASGQFALGMFYHDGIGGDVDYQKARM-WYEK 196
Query: 163 AAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRG-RGV 208
+A LG A+ + ++A L +QA+ G AQ + H G +
Sbjct: 197 SAELGVAASLNNLAVMYEKGQGVREDGQKAADLYHQAANMGSSTAQANMGKFYHNGTEFL 256
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ N ++ WY RAA A Y + Y G+G+ A +W ++A G A +
Sbjct: 257 EQNDYQSIYWYKRAALQENEEAQYALAQGYETGKGIGQDVNMAFEWYQKAGSNGSAAAGM 316
Query: 269 ------EHGLGLFTEGEMMKAVVYLELA 290
E G+G + YL +A
Sbjct: 317 KVAEYYEKGIGDIPPNQQKAIDWYLSMA 344
>gi|392380396|ref|YP_004987553.1| conserved hypothetical protein; putative TPR repeats; putative
Beta-lactamase [Azospirillum brasilense Sp245]
gi|356882926|emb|CCD03945.1| conserved hypothetical protein; putative TPR repeats; putative
Beta-lactamase [Azospirillum brasilense Sp245]
Length = 567
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQ 162
G + G GV + KA K A +G AMV G + ++ + +AAI YR
Sbjct: 257 GLLYTRGLGVPNDPHKAETWLRKAAVQGDAEAMVQLGHLNSRGAGFQPNLFDAAI-WYRA 315
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA LG AQ P + EAV+ L +A+ G +AQ ++ GRGV
Sbjct: 316 AAELGHREAQKILAQMYFAGSGVPRDEVEAVRWLERAAGQGDPQAQLRIGALYAEGRGVA 375
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ A W+ RAA+ G A+YN + +S G G+P A W +RAA+ G AQ
Sbjct: 376 RDYDRALDWFRRAADQGNSDAVYNIGMLHSLGLGVPRDPAGALSWYQRAAEQGSVLAQFR 435
Query: 270 HG 271
G
Sbjct: 436 LG 437
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKE 154
EAMV L G G G + NL A + A G A MY+ D+ E
Sbjct: 287 EAMVQL--GHLNSRGAGFQPNLFDAAIWYRAAAELGHREAQKILAQMYFAGSGVPRDEVE 344
Query: 155 AAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALC 201
A L R AA GDP AQ + + A+ +A+ G+ A Y + +
Sbjct: 345 AVRWLER-AAGQGDPQAQLRIGALYAEGRGVARDYDRALDWFRRAADQGNSDAVYNIGML 403
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G GV + A WY RAAE G V A + + G+G+P + A W ++AA+
Sbjct: 404 HSLGLGVPRDPAGALSWYQRAAEQGSVLAQFRLGAMLASGDGVPQDYPGAALWSRKAAEQ 463
Query: 262 GHGKAQLEHG----LGLFTEGEMMKAVVYL 287
GH A + G GL E + +A+ +L
Sbjct: 464 GHVGAMVNIGRFSMQGLGVERDTAEALRWL 493
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLM-----------------Y 147
LR G + GRGV ++ D+ALD F + A +G++ A+ + G++ Y
Sbjct: 362 LRIGALYAEGRGVARDYDRALDWFRRAADQGNSDAVYNIGMLHSLGLGVPRDPAGALSWY 421
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
++ + ++ +R A+L P + A +A+ GHV A + +G G
Sbjct: 422 QRAAEQGSVLAQFRLGAMLASGDGVPQDYPGAALWSRKAAEQGHVGAMVNIGRFSMQGLG 481
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH-RQARKWMKRAADCGHGKA 266
V+ + EA RW AA+ AM T+L +G +AR W++RAA G +A
Sbjct: 482 VERDTAEALRWLSAAADQKEAAAM--TALGELYGHWSDEKDVVRARSWLERAAALGEPRA 539
Query: 267 Q 267
+
Sbjct: 540 K 540
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
GH AQY L +G+GV N+ +A WY RAA+ G+ A + Y +G
Sbjct: 47 GHADAQYSLGRLYDQGKGVVRNIVDAVGWYRRAADQGHGEAQARLAEIYYYG 98
>gi|397676944|ref|YP_006518482.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395397633|gb|AFN56960.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 138
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ G +AQY L +G+ V + ++A WY RAA GY A +N Y GE
Sbjct: 10 LQKAAERGDAKAQYALGNAYSKGQDVSKSDEQAVSWYQRAAHQGYAPAEFNLGAAYYHGE 69
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK----AVVYLELATRAGETAA 298
G+ + QA W ++AA+ G KAQ G+ T + K A+++++ A G+ A
Sbjct: 70 GVVQDYGQAVFWYQKAAEQGDAKAQTALGVAYITGRGVTKSRDNALIWIQKAADQGDVTA 129
Query: 299 DHV 301
+
Sbjct: 130 QKI 132
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+AV +A+ G+ A++ L + G GV + +A WY +AAE G +A +
Sbjct: 40 EQAVSWYQRAAHQGYAPAEFNLGAAYYHGEGVVQDYGQAVFWYQKAAEQGDAKAQTALGV 99
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
Y G G+ S A W+++AAD G AQ
Sbjct: 100 AYITGRGVTKSRDNALIWIQKAADQGDVTAQ 130
>gi|440799995|gb|ELR21038.1| Sel1 repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 810
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYR 161
R+G KHG+G KN + A F+K A G A + G Y + A Y
Sbjct: 253 RYGVCLKHGKGTEKNPETAFSWFMKAAEAGLAAAQYNVGWCYRYGCGVARNYDLAFRWYS 312
Query: 162 QAA---------VLGDPAAQ----PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+AA +G ++ N E+A + +A+ AG AQ L C RG+G
Sbjct: 313 KAADQHYSHGMFAVGKAYSKGWGVEQNPEKAFEWYTRAAEAGSGEAQCNLGCCYARGQGT 372
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
++++A WY +AAE G V A N + Y G+G+ QA + +A + G+ KAQ
Sbjct: 373 PKDMEKARVWYAKAAEQGNVPAQANLGVMYLKGDGIAPDINQAIHLLSQAGNHGNLKAQF 432
Query: 269 EHGLGLF----TEGEMMKAVVYL 287
G F TE + KA +
Sbjct: 433 HLGTTYFFGDQTERDYCKAAEWF 455
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
GK + G GV +N +KA + + + A GS A + G Y E A Y +A
Sbjct: 327 GKAYSKGWGVEQNPEKAFEWYTRAAEAGSGEAQCNLGCCYARGQGTPKDMEKARVWYAKA 386
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + +A+ LL QA G+++AQ+ L G +
Sbjct: 387 AEQGNVPAQANLGVMYLKGDGIAPDINQAIHLLSQAGNHGNLKAQFHLGTTYFFGDQTER 446
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
+ +AA W+L+ AE G +N + Y+ G+ + R+A +W+ A + G+
Sbjct: 447 DYCKAAEWFLKGAEQGDAVCAFNVGVMYNNALGVAKNLREAIRWLLLAEEKGY 499
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
YR L N E A +A+ AG AQY + C G GV N A RWY
Sbjct: 252 YRYGVCLKHGKGTEKNPETAFSWFMKAAEAGLAAAQYNVGWCYRYGCGVARNYDLAFRWY 311
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLF 275
+AA+ Y M+ YS G G+ + +A +W RAA+ G G+AQ G G
Sbjct: 312 SKAADQHYSHGMFAVGKAYSKGWGVEQNPEKAFEWYTRAAEAGSGEAQCNLGCCYARGQG 371
Query: 276 TEGEMMKAVVYLELATRAGETAA 298
T +M KA V+ A G A
Sbjct: 372 TPKDMEKARVWYAKAAEQGNVPA 394
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
+EA +A+ AGH A Y+ +CL G+G + N + A W+++AAE G A YN
Sbjct: 233 QEAHDCYKRAAEAGHTEASYRYGVCLKHGKGTEKNPETAFSWFMKAAEAGLAAAQYNVGW 292
Query: 237 CYSFGEGLPLSHRQARKWMKRAAD 260
CY +G G+ ++ A +W +AAD
Sbjct: 293 CYRYGCGVARNYDLAFRWYSKAAD 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 49/269 (18%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY---------------WEMDK 152
G + G ++ KA + FLKGA +G + + G+MY W +
Sbjct: 435 GTTYFFGDQTERDYCKAAEWFLKGAEQGDAVCAFNVGVMYNNALGVAKNLREAIRWLLLA 494
Query: 153 KEAAISLYRQAA--VLGDPAAQ-----PANAEEAVKL-------LY-------------- 184
+E ++GD AA AEE L +Y
Sbjct: 495 EEKGYDDVPDTMNDIIGDSAAALLPILTEKAEEGSALGQYYLSQVYTRLTPPDTKASSYW 554
Query: 185 --QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+A+ GH A Y L L G GV+ N ++ W RA E G + A+Y L Y G+
Sbjct: 555 SERAAGQGHKEAMYDLGNLLLTGDGVERNTEKGIAWLKRAIEAGSIDAIYRLGLLYYEGK 614
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
+ +R+A K RAA+ G A G G+ E KA + A G+ A
Sbjct: 615 EVGRDYRKAFKHFTRAANAGDVTAAYRVGKMYARGIGVEQNGKKAAKWFVRAAAQGQVGA 674
Query: 299 DHVKNVILQQLSATSRDRAMLVVDSWRAM 327
+ + + Q RD A+ +AM
Sbjct: 675 FYAEAALYDQGVLVPRDEALAFARYTQAM 703
>gi|363540752|ref|YP_004895098.1| mg1047 gene product [Megavirus chiliensis]
gi|350611917|gb|AEQ33361.1| putative Sel1-like repeat-containing protein [Megavirus chiliensis]
Length = 570
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+ KA + A +G + A + G Y + +K E AI ++++ G
Sbjct: 112 GFMYEEDIGIIGKTKKAKKWYALSANQGLSFAQYNLGYYYIKKNKYEKAIDCFQKSMQSG 171
Query: 168 DPAAQ-----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+ N ++A+KL ++ G++ +QY+L + + G + N+ EA
Sbjct: 172 CYVSNYMLAETYLKLSVPNHDQAIKLFTISANKGYIYSQYRLGILYYDGIHIPININEAI 231
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG--- 273
+W+L AA G + + Y G+ + + QA KW K + G+ A E+GLG
Sbjct: 232 KWFLMAANQGCDMSQNKLGVIYFEGKHINVDINQAYKWFKLSTKQGNYFA--EYGLGRVY 289
Query: 274 ---LFTEGEMMKAV 284
FT+ KA+
Sbjct: 290 DSKYFTKYNCQKAI 303
>gi|17988811|ref|NP_541444.1| TPR repeat-containing protein, partial [Brucella melitensis bv. 1
str. 16M]
gi|17984631|gb|AAL53708.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
str. 16M]
Length = 317
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +EA K A+ G AQY++ +G G+ NL++A WY AA+ G AM+N
Sbjct: 72 NVKEAAKWYQLAADQGFAPAQYRIGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNL 131
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
++ ++ G + A +W AA+ G +Q G+ GL + ++ + LA
Sbjct: 132 AVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALA 191
Query: 291 TRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
AG+ A ++ I + L RA V W+A P
Sbjct: 192 ANAGDKDAAEKRDQIAKALKPEMLTRAKGAVKLWKAKP 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G+ A
Sbjct: 33 PSIPEEAGPAALREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQ 92
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 278
Y G G+ + +A+ W + AAD G+ A H L LF G
Sbjct: 93 YRIGSFNEKGLGMARNLEKAKSWYQLAADQGNASAM--HNLAVLFATG 138
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 98 LREAMV------LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD 151
LREA L G R+ GRGV +N+ +A + A +G A G
Sbjct: 44 LREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIGSF----- 98
Query: 152 KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFN 211
E + + R N E+A A+ G+ A + LA+ G +
Sbjct: 99 -NEKGLGMAR-------------NLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPD 144
Query: 212 LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
A RW+ AAE G + YN + + G G+P++ ++ KW AA+ G A
Sbjct: 145 NAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDA 199
>gi|323450201|gb|EGB06084.1| hypothetical protein AURANDRAFT_29905, partial [Aureococcus
anophagefferens]
Length = 323
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 26/200 (13%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
EA+V L G + G GV+ + KA + A RG LA + GL+ + + E A
Sbjct: 4 EAIVNL--GNLYNDGSGVKLDKKKAERLYRTAADRGIALAQYNTGLLLYSEQRFEEAFRY 61
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y AA G+ RA+ L +C RG G + + ++AA+ +
Sbjct: 62 YALAA-----------------------DQGYRRAENNLGICHERGNGTESD-KKAAKIW 97
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
RA E G V AM N Y G G+ L ++A + + AAD G+ AQ G L +E
Sbjct: 98 KRAVELGNVYAMRNLGTLYRDGSGVKLDKKKAERLYRMAADRGNAVAQTSLGFFLESEKR 157
Query: 280 MMKAVVYLELATRAGETAAD 299
+A Y LA G A+
Sbjct: 158 HEEAFRYFALAADQGHIGAE 177
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 113 HGRGVRKNLDKALDSFLKGAAR-GSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVL 166
H RG DK K A G+ AM + G +Y + +DKK+A LYR AA
Sbjct: 81 HERGNGTESDKKAAKIWKRAVELGNVYAMRNLGTLYRDGSGVKLDKKKAE-RLYRMAADR 139
Query: 167 GDPAAQPA---------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
G+ AQ + EEA + A+ GH+ A++ L G G ++AA+
Sbjct: 140 GNAVAQTSLGFFLESEKRHEEAFRYFALAADQGHIGAEFCLGCSYMDGDGT----EKAAK 195
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+ RA E G V AM N + Y G G+ L ++A + + AAD G AQ L E
Sbjct: 196 IWKRAVELGDVDAMINLGMLYEHGSGVKLDKKKAARLYRAAADRGVAAAQCNLAFLLDAE 255
Query: 278 GEMMKAVVYLELATRAGETAADH 300
+ +A Y LA G T A+H
Sbjct: 256 EKHEEAFRYYALAANQGYTRAEH 278
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 78/216 (36%), Gaps = 42/216 (19%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K W A+ L + G ++ G GV+ + KA + A RG+ +A G
Sbjct: 95 KIWKRAV-ELGNVYAMRNLGTLYRDGSGVKLDKKKAERLYRMAADRGNAVAQTSLGFFLE 153
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPA---------NAEEAVKLLYQASIAGHVRAQYQLA 199
+ E A + AA G A+ E+A K+ +A G V A L
Sbjct: 154 SEKRHEEAFRYFALAADQGHIGAEFCLGCSYMDGDGTEKAAKIWKRAVELGDVDAMINLG 213
Query: 200 LCLHRGRGVDF----------------------NL----------QEAARWYLRAAEGGY 227
+ G GV NL +EA R+Y AA GY
Sbjct: 214 MLYEHGSGVKLDKKKAARLYRAAADRGVAAAQCNLAFLLDAEEKHEEAFRYYALAANQGY 273
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
RA +N CY G + +AR W +RAA G+
Sbjct: 274 TRAEHNLGCCYMSGACTEVDVGKARYWFERAAAKGN 309
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
G V A+ N Y+ G G+ L ++A + + AAD G AQ GL L++E +A
Sbjct: 1 GNVEAIVNLGNLYNDGSGVKLDKKKAERLYRTAADRGIALAQYNTGLLLYSEQRFEEAFR 60
Query: 286 YLELATRAGETAADHVKNVILQQLSATSRDR 316
Y LA G A++ + ++ + T D+
Sbjct: 61 YYALAADQGYRRAENNLGICHERGNGTESDK 91
>gi|300023957|ref|YP_003756568.1| Sel1 domain-containing protein repeat-containing protein
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525778|gb|ADJ24247.1| Sel1 domain protein repeat-containing protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 362
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G+ + G GV+KN KA D ++K A G A L E D+K AA L+ +
Sbjct: 117 GRIYGEGLGVQKNERKAYDYYMKAAQLGDVQGSFAAALALAEGRGVKKDRKVAA-ELFEK 175
Query: 163 AAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA+ G+ A +P + A + + A+ G AQY LA G G +
Sbjct: 176 AALTGNAEANYNLGMLFLKGDGKPQSPIRAFQHIRYAAEKGVPEAQYDLAELYQTGTGTE 235
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
N EAARW RAAE G A Y+ ++ G GL + MK AAD G AQ
Sbjct: 236 ANALEAARWLSRAAEQGLTPAQYDYAVKLLQGFGLSKDESKIAVLMKAAADKGVPGAQ 293
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+KL +A+ G +A + G GV N ++A +Y++AA+ G V+ + +L
Sbjct: 97 ALKLAEEAAQRGEAQANTLIGRIYGEGLGVQKNERKAYDYYMKAAQLGDVQGSFAAALAL 156
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ G G+ + A + ++AA G+ +A G+ LF +G+
Sbjct: 157 AEGRGVKKDRKVAAELFEKAALTGNAEANYNLGM-LFLKGD 196
>gi|293411917|ref|ZP_06654642.1| predicted protein [Escherichia coli B354]
gi|291469472|gb|EFF11961.1| predicted protein [Escherichia coli B354]
Length = 381
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSF-LKGAARGSTLAMVDAGLMY 147
K W D + + G + G GV K+L+KA++ + L G AR A + G +Y
Sbjct: 63 KKWIDLAAEKGDKVAYYALGVMYTFGEGVDKDLNKAVEYYKLAGDAR-EGRAYNNLGAIY 121
Query: 148 WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
Q +LG + A+K AS AG+V+A L G+G
Sbjct: 122 --------------QKGMLG-----KVDHALAIKYFKLASDAGYVKATSVLGAYYQYGKG 162
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V N ++A +Y +AA+ G AM + Y G G+ + +A KW K+AA+ G+ A
Sbjct: 163 VKKNYKKAFTYYKKAADQGSSEAMIGLGILYDDGLGVKRNDAEAVKWYKKAAELGNADAI 222
Query: 268 LEHGLGLFTEGEMMK 282
G+ ++ GE +K
Sbjct: 223 TNLGI-MYENGEGVK 236
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 183 LYQASIAGHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
L +A+ AG AQ +L G G D ++ EA +W AAE G A Y + Y+FG
Sbjct: 29 LIEAATAGDTAAQSELGTNYFDGVNGFDKDVVEAKKWIDLAAEKGDKVAYYALGVMYTFG 88
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRAGET 296
EG+ +A ++ K A D G+A G ++ +G + K A+ Y +LA+ AG
Sbjct: 89 EGVDKDLNKAVEYYKLAGDAREGRAYNNLG-AIYQKGMLGKVDHALAIKYFKLASDAGYV 147
Query: 297 AADHV 301
A V
Sbjct: 148 KATSV 152
>gi|403050408|ref|ZP_10904892.1| hypothetical protein AberL1_02428 [Acinetobacter bereziniae LMG
1003]
Length = 478
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 155 AAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
AA++L + A A AV+LL A++AGHV AQY LA CL G G + NL +
Sbjct: 264 AAVNLLKNAENAKTEQKHQEYATLAVELLSHAAVAGHVPAQYSLAQCLRYGLGTEKNLDQ 323
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
W RAA + A + S+ LPL H + AAD GH +A L
Sbjct: 324 GVSWLERAAMQNHPDAQFELSML------LPLEHEHHLPLLNAAADKGHIQAML 371
>gi|121606744|ref|YP_984073.1| Sel1 domain-containing protein [Polaromonas naphthalenivorans CJ2]
gi|120595713|gb|ABM39152.1| Sel1 domain protein repeat-containing protein [Polaromonas
naphthalenivorans CJ2]
Length = 272
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G + G + K+L KA AA G DA +D+ E + +A +
Sbjct: 109 RLGMLYSTGGAIDKDLAKARQYLSLAAAHGDK----DAIERLASLDQPERPPGTFEEAEI 164
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
L A EA L +A+ +G++ A+ +LA GRGV+ +L +AA++++++A+
Sbjct: 165 L----ASTGRHAEAAVLYKRAADSGNLAARTRLAWMYEAGRGVERDLGQAAQFFMQSAQA 220
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G A Y T++ Y G G P Q+ +W+KRAA+
Sbjct: 221 GNAEAQYATAVMYRTGRGQPKDREQSLRWLKRAAE 255
>gi|445129100|ref|ZP_21380648.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444854410|gb|ELX79474.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
Length = 457
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 336 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 395
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCG 262
GRGV N + A +WYL+AAE G A Y+ G +G+P ++QA W A+ G
Sbjct: 396 TGRGVPENSRNALKWYLKAAEQGVTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYG 455
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 58 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 117
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 118 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 177
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+ +RQA W+
Sbjct: 178 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVSQDYRQAVYWLNEG 236
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 306 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 365
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 366 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 396
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 30 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 89
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ Y++GE PLS ++A +W ++AA+ G Q
Sbjct: 90 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQ 126
>gi|407972996|ref|ZP_11153909.1| peptidoglycan binding domain-containing protein [Nitratireductor
indicus C115]
gi|407431767|gb|EKF44438.1| peptidoglycan binding domain-containing protein [Nitratireductor
indicus C115]
Length = 1239
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 41/206 (19%)
Query: 161 RQAAVLGDP----------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
R+AA GDP A PA +A++ +A+ AG AQ +L +
Sbjct: 963 REAAAGGDPKAFFEIANRYMDGQGGAVDPA---KAIEWYTKAADAGFAPAQSRLGDIYQK 1019
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
G G+D + +A W+ AAE G AM+N + ++ G ++ A +W AA+ G
Sbjct: 1020 GIGIDRDPAKAKMWFQLAAEQGNASAMHNLGVLFAMGATGETDNQSAARWFLEAAEHGVT 1079
Query: 265 KAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA----DHVKNVILQQLSATSRDR 316
+Q G+ G+ T+ ++ +A + +L R+G+ A D V + +L +D+
Sbjct: 1080 DSQFNLGILAAKGMGTKQDLTEAYKWFDLVARSGDKDAAAKRDEVAANMSPELLKQGKDK 1139
Query: 317 AML--------------VVDSWRAMP 328
A+L + D+WR P
Sbjct: 1140 ALLWKPKPVDPAVNLVDIPDAWRTAP 1165
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L +A+ G +A +++A G+G + +A WY +AA+ G+ A Y G
Sbjct: 962 LREAAAGGDPKAFFEIANRYMDGQGGAVDPAKAIEWYTKAADAGFAPAQSRLGDIYQKGI 1021
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
G+ +A+ W + AA+ G+ A H LG+
Sbjct: 1022 GIDRDPAKAKMWFQLAAEQGNASAM--HNLGVL 1052
>gi|237746431|ref|ZP_04576911.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377782|gb|EEO27873.1| Sel1 repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 295
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EEA K +A+ AG +Q+ + L GRGV N+ EA +W+ +AAE + A
Sbjct: 96 NPEEAYKWYRKAAEAGLAVSQFNVGLMYQYGRGVQKNIPEAVKWFRKAAEQNHASAELKM 155
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVYLEL 289
G G+ +R+A KW +RAA+ G K + G+ L+ G +K AV Y +
Sbjct: 156 GYLTVKGIGVKRDYREAMKWYRRAAEHGDDKGYVNIGI-LYARGRGVKKDPNRAVQYYIM 214
Query: 290 ATRAGETAA 298
+ GE A
Sbjct: 215 GAQKGEPDA 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA 155
EAM ++ G + G G++KN ++A + K A G ++ + GLMY
Sbjct: 78 EAMNMI--GFMYNRGLGIQKNPEEAYKWYRKAAEAGLAVSQFNVGLMYQYGRGVQKNIPE 135
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ +R+AA +A+ + EA+K +A+ G + + +
Sbjct: 136 AVKWFRKAAEQNHASAELKMGYLTVKGIGVKRDYREAMKWYRRAAEHGDDKGYVNIGILY 195
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
RGRGV + A ++Y+ A+ G A Y G+G+P + +A W K+AA G
Sbjct: 196 ARGRGVKKDPNRAVQYYIMGAQKGEPDAQALLGTSYVLGKGIPQDNEKALFWYKKAAKNG 255
Query: 263 HGKAQLEHG 271
+A E G
Sbjct: 256 SIEAMKELG 264
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G +++GRGV+KN+ +A+ F K A + A + G + + D +EA + YR+
Sbjct: 120 GLMYQYGRGVQKNIPEAVKWFRKAAEQNHASAELKMGYLTVKGIGVKRDYREA-MKWYRR 178
Query: 163 AAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA GD + AV+ + G AQ L G+G+
Sbjct: 179 AAEHGDDKGYVNIGILYARGRGVKKDPNRAVQYYIMGAQKGEPDAQALLGTSYVLGKGIP 238
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE-GLPLSHRQARKW 254
+ ++A WY +AA+ G + AM Y G G+ +A +W
Sbjct: 239 QDNEKALFWYKKAAKNGSIEAMKELGYIYETGRLGVKKDLGEAERW 284
>gi|320169293|gb|EFW46192.1| Sel1 domain-containing protein repeat-containing protein
[Capsaspora owczarzaki ATCC 30864]
Length = 818
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 95/235 (40%), Gaps = 64/235 (27%)
Query: 94 ALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK 153
AL L +A +L + + GRGV+K++ +AL AARG A V G +Y DK
Sbjct: 252 ALNGLTDAQYML--AEFYFAGRGVKKDVPEALRRLKVAAARGHNPARVRLGALY---DKG 306
Query: 154 EA--------AISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHV 192
E+ A Y QAA GD + A N E+VK L +++ G
Sbjct: 307 ESGVLRDRAEAFKWYMQAAEAGDAVGEYAVAGFYKKGIHVALNDPESVKWLIRSAEHGCS 366
Query: 193 RAQ------------------------------------YQLALCLHRGRGVDFNLQEAA 216
AQ + +A GRG+ N +EA
Sbjct: 367 DAQVALGSRYMDGKGVGQDRKAAVHWFRKSSEQLNRSGQFWMANIFANGRGLTKNDKEAF 426
Query: 217 RWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG--HGKAQLE 269
++Y AAE G A Y Y+ G G+ S +A KW +RAAD G H KA LE
Sbjct: 427 KYYKMAAEQGLAAAQYTLGHMYTKGRGVAASQAEANKWFRRAADQGNLHAKAALE 481
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 51/197 (25%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG--DPAA 171
GRGV++++ A+ A + A +D L+ L R++ ++ +
Sbjct: 189 GRGVKQSVTDAIAWLRIAAEANNKFAQLDLALV------------LSRESPLVDRDGTKS 236
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR-------------- 217
P + EA K L+QA++ G AQY LA GRGV ++ EA R
Sbjct: 237 NPRDELEASKWLHQAALNGLTDAQYMLAEFYFAGRGVKKDVPEALRRLKVAAARGHNPAR 296
Query: 218 -----------------------WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 254
WY++AAE G Y + Y G + L+ ++ KW
Sbjct: 297 VRLGALYDKGESGVLRDRAEAFKWYMQAAEAGDAVGEYAVAGFYKKGIHVALNDPESVKW 356
Query: 255 MKRAADCGHGKAQLEHG 271
+ R+A+ G AQ+ G
Sbjct: 357 LIRSAEHGCSDAQVALG 373
>gi|313147939|ref|ZP_07810132.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136706|gb|EFR54066.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 832
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K++ + L L+ G +++G V +N KA + F K A AM GL
Sbjct: 450 KAYYEKAAGLGSCFALVELGFLYENGDVVEQNYGKAFELFQKAAEEEYPYAMYRVGL--- 506
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
Y ++G+P QP EA +A+ G A + L C G G
Sbjct: 507 -----------YLDRGIIGEP--QPV---EAFAWYEKAAGRGDGDAIFALGRCYKNGIGT 550
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ N +A W+ + AE R + L Y +G G+ + QA ++M +AA+ +G AQ
Sbjct: 551 EENPDKALEWFAKGAENNEPRCLTELGLAYEYGSGVEENPHQAVEYMTKAAEQDYGYAQF 610
Query: 269 EHGLGLF 275
+ G F
Sbjct: 611 KMGDYYF 617
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDK-ALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G + G G +K A++ + K A LAM+ G Y ++ DK E A +
Sbjct: 610 FKMGDYYFFGYGACPEDNKQAVEWYEKAVANDIPLAMLRMGEYYLYDYDKLNESEKAFNY 669
Query: 160 YRQAAV-------LGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+++AA LG N EA K A+ +G+V + Y+ LC + G GV
Sbjct: 670 FKKAAEAECYNEGLGICYEMGIGVEDNETEAFKYYTLAADSGNVMSMYRTGLCYYNGVGV 729
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N EA RW+ AA V + Y +GEG +W+ +AA+ KAQ
Sbjct: 730 KQNYAEAYRWFNDAAGNENVASYYYLGKMLMYGEGCVPDTETGIQWLMKAAEHNSDKAQF 789
Query: 269 EHG 271
E G
Sbjct: 790 ELG 792
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 34/201 (16%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+D LN+ +F + +AA C +N+ L G ++ G GV N +A
Sbjct: 657 YDKLNESEKAFNYFK-KAAEAEC--YNEGL------------GICYEMGIGVEDNETEAF 701
Query: 126 DSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ 185
+ A G+ ++M GL Y+ + N EA +
Sbjct: 702 KYYTLAADSGNVMSMYRTGLCYY-------------------NGVGVKQNYAEAYRWFND 742
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ +V + Y L L G G + + +W ++AAE +A + Y G G+
Sbjct: 743 AAGNENVASYYYLGKMLMYGEGCVPDTETGIQWLMKAAEHNSDKAQFELGNAYLMGNGVE 802
Query: 246 LSHRQARKWMKRAADCGHGKA 266
+ A +W ++AA+ G+ KA
Sbjct: 803 ENDEIAMEWFEKAAENGNEKA 823
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVK 181
+K+ + K A GS A+V+ G +Y GD Q N +A +
Sbjct: 447 EKSKAYYEKAAGLGSCFALVELGFLY-----------------ENGDVVEQ--NYGKAFE 487
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
L +A+ + A Y++ L L RG + EA WY +AA G A++ CY G
Sbjct: 488 LFQKAAEEEYPYAMYRVGLYLDRGIIGEPQPVEAFAWYEKAAGRGDGDAIFALGRCYKNG 547
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
G + +A +W + A+ + E GL
Sbjct: 548 IGTEENPDKALEWFAKGAENNEPRCLTELGL 578
>gi|421623956|ref|ZP_16064834.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
gi|408702468|gb|EKL47878.1| Sel1 repeat protein [Acinetobacter baumannii OIFC098]
Length = 302
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQ 162
G + +G G KN KALD + K AA+ + A G++Y E D K+A Y +
Sbjct: 121 GAYYANGDGGVKNYQKALDWYSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKA-FEWYSK 179
Query: 163 AAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
AA AQ N ++A +L +A+ G+ +AQ L G GV+
Sbjct: 180 AAAQNYADAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVN 239
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ ++A WY +AA+ A + + Y GEG+ ++ A KW+++AA+ G+ A
Sbjct: 240 QDYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDA--- 296
Query: 270 HGLGLFTE 277
L LF E
Sbjct: 297 --LSLFEE 302
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 26/202 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G+GV +N KA + + K A +G A + G Y D + Y++A
Sbjct: 85 GAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQNNLGAYYANGD---GGVKNYQKALDWY 141
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
AA NAE A+Y L + G GV + ++A WY +AA Y
Sbjct: 142 SKAAAQDNAE----------------AKYYLGILYEEGYGVTQDYKKAFEWYSKAAAQNY 185
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKA 283
A N + Y+ G+G+ L++++A + +AA+ G+ KAQ G LG+ + KA
Sbjct: 186 ADAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVNQDYKKA 245
Query: 284 VVYLELATRAGETAADHVKNVI 305
E ++A + D + +
Sbjct: 246 ---FEWYSKAAQQENDEAQFTV 264
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + ++A + +A+ G+ AQ L G+GV+ N ++A WY +AAE G V+A
Sbjct: 59 PQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQN 118
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
N Y+ G+G ++++A W +AA + +A+ G+ L+ EG
Sbjct: 119 NLGAYYANGDGGVKNYQKALDWYSKAAAQDNAEAKYYLGI-LYEEG 163
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
+G AQ +L G+ V + ++A WY +AA G A N Y+ G+G+ ++
Sbjct: 39 SGDAGAQAKLGELYVEGQVVPQDYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNY 98
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLF 275
++A +W +AA+ G KAQ + LG +
Sbjct: 99 KKAFEWYSKAAEQGEVKAQ--NNLGAY 123
>gi|445412297|ref|ZP_21433166.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
gi|444767359|gb|ELW91608.1| Sel1 repeat protein [Acinetobacter sp. WC-743]
Length = 282
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 159 LYRQAAVLGD-PAAQP------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
L+ AA LGD P+ N +A + +A+ AG+ A+ + G
Sbjct: 118 LFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMYLHG 177
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + +A++WY++AAE G V A YN L Y G+G+ + QA +W +AA+ G
Sbjct: 178 HGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQWFLKAANQGESG 237
Query: 266 AQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
AQ G GL ++ A + E + +AG + A
Sbjct: 238 AQYHLGKIYKDGLGVNKDLSLAKNWFEKSAQAGNSLA 274
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +K G GV++N +A + +LK A G + A + G MY + G
Sbjct: 135 GNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGNMY-----------------LHG 177
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+Q + +A + +A+ G V AQY L L G G+ + +A +W+L+AA G
Sbjct: 178 HGVSQ--DKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDGIKQDYSQAYQWFLKAANQGE 235
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A Y+ Y G G+ A+ W +++A G+
Sbjct: 236 SGAQYHLGKIYKDGLGVNKDLSLAKNWFEKSAQAGN 271
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
Y A +L + + +A KL A+ G V + +L G GV N +A+ +Y
Sbjct: 96 YNLAILLSSDSGIKNDYAQAKKLFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASEYY 155
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF---- 275
L+AA GY A N Y G G+ +A +W +AA+ G AQ GL F
Sbjct: 156 LKAANAGYSAAENNIGNMYLHGHGVSQDKLKASQWYIKAAEQGEVDAQYNLGLMYFLGDG 215
Query: 276 TEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAM 318
+ + +A + A GE+ A + I + ++D ++
Sbjct: 216 IKQDYSQAYQWFLKAANQGESGAQYHLGKIYKDGLGVNKDLSL 258
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 190 GHVRAQYQLALCLHRG-RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + + G + + N+ EA +WY +A+ GY +A YN ++ S G+ +
Sbjct: 53 GDPEAQYNMGVLFTDGYKDLKPNIIEAFKWYELSADKGYAKAKYNLAILLSSDSGIKNDY 112
Query: 249 RQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA-DHVKN 303
QA+K + AA G + E G G+ + +A Y A AG +AA +++ N
Sbjct: 113 AQAKKLFEDAAALGDVPSLNELGNFYKDGIGVQENYAQASEYYLKAANAGYSAAENNIGN 172
Query: 304 VIL 306
+ L
Sbjct: 173 MYL 175
>gi|422014678|ref|ZP_16361287.1| Sel1 domain-containing protein [Providencia burhodogranariea DSM
19968]
gi|414100558|gb|EKT62173.1| Sel1 domain-containing protein [Providencia burhodogranariea DSM
19968]
Length = 348
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+K L AS G + AQ+ LAL RG GV + +A RW+++AA+ G A Y + CY
Sbjct: 248 AIKWLTLASEQGEISAQFNLALIYARGDGVPADQAKACRWFIKAAQHGNPDAQYASGACY 307
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+G G+ ++A W K AA H +A+
Sbjct: 308 QYGMGVTQDDQKALYWYKLAASQRHDRAE 336
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 146 MYWEMDKKEAAISLYRQAAVLGDPAA----QPANAEEAVKLLYQASIAGHVRAQYQLALC 201
+Y + KK +LY +LG AA N ++A + +++ AQ L +
Sbjct: 179 IYLSLAKKNNPQALY----LLGYQAATGMYDNVNYQQAYQYFSRSAQLAFSPAQNSLGML 234
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G+GV ++ A +W A+E G + A +N +L Y+ G+G+P +A +W +AA
Sbjct: 235 YLHGQGVKKDVPSAIKWLTLASEQGEISAQFNLALIYARGDGVPADQAKACRWFIKAAQH 294
Query: 262 GHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 290
G+ AQ ++G+G+ + + KA+ + +LA
Sbjct: 295 GNPDAQYASGACYQYGMGVTQDDQ--KALYWYKLA 327
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ+ LA+ + EAA+WY +AE G+ +A N +L Y G+G+ +
Sbjct: 45 GIAEAQFNLAILYQSEK----KFAEAAKWYRLSAEQGFTKAQINLALLYQQGKGVTKDSK 100
Query: 250 QARKWMKRAADCGHGKAQL 268
Q WM+++AD G Q+
Sbjct: 101 QMLYWMQKSADAGDPLGQM 119
>gi|406896033|gb|EKD40439.1| Sel1 protein [uncultured bacterium]
Length = 251
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 114 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-MDKKE---AAISLYRQAAVLG-- 167
G G +N KAL+ +L+ A RG + A +G MY++ M K+ A L R+AA+ G
Sbjct: 47 GIGTAQNYAKALELYLQAANRGDSEAKYISGGMYFKGMGAKKDLPMAFKLLREAAMSGKS 106
Query: 168 DPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQE 214
P +Q P N +A+ A+ G+ AQ +L G+ VD ++++
Sbjct: 107 SPESQQIVGQAFLLGSGVPKNYGKALHWYTLAAENGNKEAQNELGFMYFVGKVVDQDVKK 166
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGL-PLSHRQARKWMKRAADCGH 263
A +L+AAE G A YN + Y G G + +Q+ W+ AA GH
Sbjct: 167 GAGLFLQAAENGLAIAQYNVGIMYFTGNGFDSVDLQQSYAWLNLAASNGH 216
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 29/152 (19%)
Query: 81 LRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM 140
LR A++ KS P + +V G+ F G GV KN KAL + A G+ A
Sbjct: 97 LREAAMSGKS-----SPESQQIV----GQAFLLGSGVPKNYGKALHWYTLAAENGNKEAQ 147
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLAL 200
+ G MY+ +G Q + ++ L QA+ G AQY + +
Sbjct: 148 NELGFMYF-----------------VGKVVDQ--DVKKGAGLFLQAAENGLAIAQYNVGI 188
Query: 201 CLHRGRGVD-FNLQEAARWYLRAAEGGYVRAM 231
G G D +LQ++ W AA G+ AM
Sbjct: 189 MYFTGNGFDSVDLQQSYAWLNLAASNGHRPAM 220
>gi|194910259|ref|XP_001982100.1| GG12409 [Drosophila erecta]
gi|190656738|gb|EDV53970.1| GG12409 [Drosophila erecta]
Length = 824
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK-----EAAISLYRQAAV 165
++ G+ +++ KAL+ F K A G+ + G +Y E + +AA + +A+
Sbjct: 348 YQGGKVTQQDHQKALEYFTKAATAGNAVGFAFLGKLYLEGSDQIKADNDAAFKYFSKASE 407
Query: 166 LGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
+GDP Q P ++ +A+ QA+ G V Q QL G GV +
Sbjct: 408 MGDPVGQSGLGLMYLNGLGVPRDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKTDY 467
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+ A +++ A + G+V A YN + ++G G+ S A ++ K ++ G ++L H
Sbjct: 468 KLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMHAY 527
Query: 273 GLFTEGEMMKAVVYLELATRAGETAA 298
+ + + +A + L G A
Sbjct: 528 SDYKDNRIDEAYMQYSLMAEVGYEVA 553
>gi|241204766|ref|YP_002975862.1| Sel1 domain-containing protein repeat-containing protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858656|gb|ACS56323.1| Sel1 domain protein repeat-containing protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 865
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 101/257 (39%), Gaps = 59/257 (22%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ---- 172
D+A+ + A+RG+ AM D G MY + +D+ EA I Y ++A LGD +
Sbjct: 336 DQAMYWMKEAASRGNARAMADVGAMYEQGKGVPVDESEARI-WYGKSAELGDSSGARRFG 394
Query: 173 ---------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV--------------- 208
P + E VK L +++ AG A LA G G+
Sbjct: 395 QSLYRGTGGPRDVENGVKWLEKSAAAGDTDAMRVLAYGYENGGGLPKDVVKAFEWFQKAA 454
Query: 209 -----DFNLQEAAR----------------WYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
D L+ A R WYL+AAE G +A Y L Y GEG
Sbjct: 455 EAGDTDAFLEVADRTYDGSGTTADAQKSFVWYLKAAENGSAKAQYCVGLLYERGEGTTQD 514
Query: 248 HRQARKWMKRAADCGHGKAQLEHGLGLFTEGEM----MKAVVYLELATRAGETAADHVKN 303
R+A W K AA+ G+ A E G + + K++ YLE AG A +
Sbjct: 515 SREAVHWFKAAAENGYIDAFAELGQMYANDANLPRDDGKSIDYLEKGAAAGNVTAMVLLG 574
Query: 304 VILQQLSATSRDRAMLV 320
+ + +RD A +
Sbjct: 575 IKYEDGDGVARDYAKAI 591
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD---------------- 151
G+ + + + ++ K++D KGAA G+ AMV G+ Y + D
Sbjct: 538 GQMYANDANLPRDDGKSIDYLEKGAAAGNVTAMVLLGIKYEDGDGVARDYAKAIEWYEAA 597
Query: 152 -KKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
K++A ++YR + + +A++ L +A G+ +AQY L G+GV
Sbjct: 598 ANKKSADAMYRLGTLYRGADGSQKDFGKALEWLTKAGAHGNAKAQYALGDIYEYGQGVPI 657
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
+ +A W++ AA Y AM Y G G AR W ++
Sbjct: 658 DRSKALSWFMMAALKQYPEAMNAVGYYYQNGIGTKEDQTIARNWFQK 704
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAIS 158
L R G G + K+ +LK A GS A GL+Y D +EA +
Sbjct: 462 FLEVADRTYDGSGTTADAQKSFVWYLKAAENGSAKAQYCVGLLYERGEGTTQDSREA-VH 520
Query: 159 LYRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRG 205
++ AA G + A P + +++ L + + AG+V A L + G
Sbjct: 521 WFKAAAENGYIDAFAELGQMYANDANLPRDDGKSIDYLEKGAAAGNVTAMVLLGIKYEDG 580
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
GV + +A WY AA AMY Y +G +A +W+ +A HG
Sbjct: 581 DGVARDYAKAIEWYEAAANKKSADAMYRLGTLYRGADGSQKDFGKALEWLTKAG--AHGN 638
Query: 266 AQLEHGLGLFTE 277
A+ ++ LG E
Sbjct: 639 AKAQYALGDIYE 650
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 111 FKHGRGVRKNLDKA---LDSFL-KGAARG-STLAMVDAGLMYWEMD----KKEAAISLYR 161
+ G G KN +A LD + KG+A G TLA Y+ D +++ A+ L
Sbjct: 220 YTKGIGTEKNASRAVAMLDDLVRKGSADGMRTLAR------YYLRDGDKTQRKTALDLLE 273
Query: 162 QAAVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQYQL-ALCLHRGRG 207
+A LGD A A+ +A LL QA IA + A Y+ AL L +
Sbjct: 274 KAVALGDGNAMRTLADVYVAGRETKRDFAKAESLLDQA-IAQDILAAYRSKALLLLKM-- 330
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
D +A W AA G RAM + Y G+G+P+ +AR W ++A+ G
Sbjct: 331 PDPRYDQAMYWMKEAASRGNARAMADVGAMYEQGKGVPVDESEARIWYGKSAELGDSSGA 390
Query: 268 LEHGLGLF--TEG--EMMKAVVYLELATRAGETAADHV 301
G L+ T G ++ V +LE + AG+T A V
Sbjct: 391 RRFGQSLYRGTGGPRDVENGVKWLEKSAAAGDTDAMRV 428
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 27/197 (13%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY--- 147
W +A + A + R G ++ G +K+ KAL+ K A G+ A G +Y
Sbjct: 593 WYEAAANKKSADAMYRLGTLYRGADGSQKDFGKALEWLTKAGAHGNAKAQYALGDIYEYG 652
Query: 148 --WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGH-----VRAQYQ--- 197
+D+ +A +S + AA+ P A AV YQ I R +Q
Sbjct: 653 QGVPIDRSKA-LSWFMMAALKQYPEAM-----NAVGYYYQNGIGTKEDQTIARNWFQKAA 706
Query: 198 --------LALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
L L + G D + A ++Y ++AE M+ Y G G+ ++ +
Sbjct: 707 DAGSAAGALNLAWYYENGKDQDQAIAFQYYKKSAELNSAGGMFALGRFYDDGLGIAVNRQ 766
Query: 250 QARKWMKRAADCGHGKA 266
+A KW RA D G+ +A
Sbjct: 767 EAIKWYLRAMDTGYNRA 783
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ L G G+ N QEA +WYLRA + GY RA Y + Y
Sbjct: 749 FALGRFYDDGLGIAVNRQEAIKWYLRAMDTGYNRAAYRLAYAYD 792
>gi|423299970|ref|ZP_17277995.1| hypothetical protein HMPREF1057_01136 [Bacteroides finegoldii
CL09T03C10]
gi|408473779|gb|EKJ92301.1| hypothetical protein HMPREF1057_01136 [Bacteroides finegoldii
CL09T03C10]
Length = 601
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 106 RWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAV 165
R G +++G GV K++ KA D + K AA+G G Y E I + +
Sbjct: 176 RVGYCYENGIGVEKDVVKAFDWYSKAAAQGYAQGECRVGYCY------ENGIGVEKDVV- 228
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
+A +A+ G+ + + + C G GV+ + +A WY +AA
Sbjct: 229 ------------KAFDWYSKAAAQGYAQGECSVGYCYEEGIGVEKDAVKAFDWYSKAATQ 276
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE-----GEM 280
G V+A Y ++ Y + R+ARKWM +AA+ G AQ+E + GEM
Sbjct: 277 GNVQAEYKLAVYYE-----KWNWRKARKWMNKAAEDGSLDAQIESANKYIRDEFSKIGEM 331
Query: 281 MKAVV--YLELATRAG 294
K +V Y+ LA + G
Sbjct: 332 QKGMVMKYILLACKQG 347
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N A K ++A+ G+V A+ ++ C G GV+ ++ +A +WY +AA GY +
Sbjct: 46 NNTFAFKYYFEAAEQGYVNAESKVGYCYENGIGVEKDVVKAFKWYSKAATQGYAQGECKV 105
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
CY G G+ +A W +AA G+ + + E+G+G+
Sbjct: 106 GYCYENGIGVKKDVIRAFDWYSKAAAQGYAQGECNVGNCYENGIGV 151
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G GV K++ KA + K A +G G Y E I + +
Sbjct: 70 GYCYENGIGVEKDVVKAFKWYSKAATQGYAQGECKVGYCY------ENGIGVKKDVI--- 120
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
A +A+ G+ + + + C G GV ++ +A WY +AA GY
Sbjct: 121 ----------RAFDWYSKAAAQGYAQGECNVGNCYENGIGVKKDVVKAFDWYSKAAAQGY 170
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMM 281
+ CY G G+ +A W +AA G+ + + E+G+G+ E +++
Sbjct: 171 AQGECRVGYCYENGIGVEKDVVKAFDWYSKAAAQGYAQGECRVGYCYENGIGV--EKDVV 228
Query: 282 KAVVYLELATRAG 294
KA + A G
Sbjct: 229 KAFDWYSKAAAQG 241
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 31/180 (17%)
Query: 139 AMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIA--------- 189
A+ AGL + + A Y +AA G NAE V Y+ I
Sbjct: 33 ALYKAGLYMEKRENNTFAFKYYFEAAEQG-----YVNAESKVGYCYENGIGVEKDVVKAF 87
Query: 190 ---------GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
G+ + + ++ C G GV ++ A WY +AA GY + N CY
Sbjct: 88 KWYSKAATQGYAQGECKVGYCYENGIGVKKDVIRAFDWYSKAAAQGYAQGECNVGNCYEN 147
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELATRAG 294
G G+ +A W +AA G+ + + E+G+G+ E +++KA + A G
Sbjct: 148 GIGVKKDVVKAFDWYSKAAAQGYAQGECRVGYCYENGIGV--EKDVVKAFDWYSKAAAQG 205
>gi|383111063|ref|ZP_09931881.1| hypothetical protein BSGG_2168 [Bacteroides sp. D2]
gi|423294099|ref|ZP_17272226.1| hypothetical protein HMPREF1070_00891 [Bacteroides ovatus
CL03T12C18]
gi|313694633|gb|EFS31468.1| hypothetical protein BSGG_2168 [Bacteroides sp. D2]
gi|392676595|gb|EIY70026.1| hypothetical protein HMPREF1070_00891 [Bacteroides ovatus
CL03T12C18]
Length = 832
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV KN +K+ + K A +G AM GL Y + VLG+
Sbjct: 472 YENGDGVEKNYEKSFELISKAAEQGYPYAMFRVGL--------------YMEKGVLGE-- 515
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ A A + L C G G + N +A W+ + AE R
Sbjct: 516 VKP---EEAFAWYTKAAEADDNDAIFALGRCYREGIGTEENWDKALEWFSKGAEKNEARC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ + Y G G+ + ++A ++M +AA+ +G AQ + G F
Sbjct: 573 LTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFKMGDYYF 617
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 88/246 (35%), Gaps = 58/246 (23%)
Query: 89 KSWNDALRPL------REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
++W+ AL EA L G +++G GV +N KA++ +K A + A
Sbjct: 552 ENWDKALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFK 611
Query: 143 AGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ------------------------- 172
G Y+ ++ + A+ Y +A P A
Sbjct: 612 MGDYYFFGCGPCLEDNKTAVEWYEKAVANEIPMAMLRVGEYYLYDYDSLNESEKAFAYFK 671
Query: 173 ----------------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
N EA K A+ G+ + Y+ LC + G GV
Sbjct: 672 KAAEYEWYSEGLGICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYYNGVGVKQ 731
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EA RW+ AA V A+Y +GEG A +W+ +AA+ + KAQ E
Sbjct: 732 NYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNNDKAQFEL 791
Query: 271 GLGLFT 276
G T
Sbjct: 792 GNAYLT 797
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV +N +A + A G+T +M GL Y+
Sbjct: 684 GICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYY------------------- 724
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N EA + A+ +V A Y L + G G + + + A +W L+AAE
Sbjct: 725 NGVGVKQNYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNN 784
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A + Y G G+ + A +W ++AA+ G+ KA
Sbjct: 785 DKAQFELGNAYLTGNGVEENDEIAMEWFEKAAENGNEKA 823
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
+G K+ K+ + + K A G+ A+V+ +Y D E
Sbjct: 438 NGYSGVKDPVKSREYYEKAAELGACFALVELAFLYENGDGVEK----------------- 480
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N E++ +L+ +A+ G+ A +++ L + +G + +EA WY +AAE A++
Sbjct: 481 --NYEKSFELISKAAEQGYPYAMFRVGLYMEKGVLGEVKPEEAFAWYTKAAEADDNDAIF 538
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
CY G G + +A +W + A+ + E G+ G E KAV Y+
Sbjct: 539 ALGRCYREGIGTEENWDKALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYM 597
>gi|303282483|ref|XP_003060533.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458004|gb|EEH55302.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 408
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 128 FLKGAARGSTLAMVDAGLMY-WEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQA 186
FLK AA+G+TLA + GL Y + + +E N A + +A
Sbjct: 82 FLKAAAQGATLAEYNLGLFYDYGLGVEE--------------------NKSTAAEFFLKA 121
Query: 187 SIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
+ GH RAQ + L+ R + + A +WY +AA GY +A YN + Y +G G+
Sbjct: 122 AKKGHDRAQCEFGYILYSERN---DYEGAMKWYQKAAAQGYAQAEYNIGILYFYGVGVER 178
Query: 247 SHRQARKWMKRAA 259
+AR+W +RAA
Sbjct: 179 DEAKAREWFERAA 191
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 215 AARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGL 274
A W+L+AA G A YN L Y +G G+ + A ++ +AA GH +AQ E G L
Sbjct: 78 AREWFLKAAAQGATLAEYNLGLFYDYGLGVEENKSTAAEFFLKAAKKGHDRAQCEFGYIL 137
Query: 275 FTE-GEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 317
++E + A+ + + A G A++ ++ RD A
Sbjct: 138 YSERNDYEGAMKWYQKAAAQGYAQAEYNIGILYFYGVGVERDEA 181
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 24/120 (20%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAG-LMYWEMDKKEAAISLYRQAAVL 166
G + +G GV +N A + FLK A +G A + G ++Y E + E A+ Y++AA
Sbjct: 98 GLFYDYGLGVEENKSTAAEFFLKAAKKGHDRAQCEFGYILYSERNDYEGAMKWYQKAAA- 156
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G+ +A+Y + + G GV+ + +A W+ RAA G
Sbjct: 157 ----------------------QGYAQAEYNIGILYFYGVGVERDEAKAREWFERAAARG 194
>gi|117924831|ref|YP_865448.1| hypothetical protein Mmc1_1533 [Magnetococcus marinus MC-1]
gi|117608587|gb|ABK44042.1| TPR repeat SEL1 subfamily-like protein [Magnetococcus marinus MC-1]
Length = 976
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++HGRG+ N+ +A+ + A + + A+ G +Y QA G
Sbjct: 409 GDIYRHGRGIPVNIAEAMKWYRHAAEQKNVYALTSMGDIY--------------QA---G 451
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ A+ +A EA K +A++ GH AQ LA +G+GV+ +L +AA+WY +AAE G
Sbjct: 452 EGVAE--DAAEAAKWYRKAALLGHAPAQGNLADLYRQGKGVEKDLNQAAQWYTKAAEQGD 509
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+ + Y G+G+ + + A++W +++A G+ AQ
Sbjct: 510 MVSQNWLGTLYLDGDGVEKNPQLAQQWYEKSAAQGYAFAQ 549
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
L +A R G + G GV N ++A+ + + +G A + L+Y++ E
Sbjct: 327 LGDANAQFRLGLAYAQGEGVVVNPERAIYWYTLASEQGEVSAQFNLALLYYQGRLVEQDF 386
Query: 158 SLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
+ +A AS G V+A+ L GRG+ N+ EA +
Sbjct: 387 T-------------------KARFWFEHASEQGDVQARDHLGDIYRHGRGIPVNIAEAMK 427
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
WY AAE V A+ + Y GEG+ +A KW ++AA GH AQ
Sbjct: 428 WYRHAAEQKNVYALTSMGDIYQAGEGVAEDAAEAAKWYRKAALLGHAPAQ 477
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E+A++ L + + G AQ+ L LH G G+ N A WY +AAE G+ A N
Sbjct: 710 EQALRWLKKGAEGGSPEAQFHLGYMLHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGT 769
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKA------QLEHGLGLFTEGEMMKAVVYLELA 290
Y G G+ +A +W R A GH A HGLG+ + + + Y E A
Sbjct: 770 LYFQGNGVDRDVFKAVEWYTRGAKLGHVPALHNLGNHYRHGLGVAVDARLARH--YFEKA 827
Query: 291 TRAG 294
AG
Sbjct: 828 QAAG 831
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
NA AV +A+ G A L +G GVD ++ +A WY R A+ G+V A++N
Sbjct: 744 NAHRAVHWYRKAAEQGFAEAANNLGTLYFQGNGVDRDVFKAVEWYTRGAKLGHVPALHNL 803
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
Y G G+ + R AR + ++A G ++L G
Sbjct: 804 GNHYRHGLGVAVDARLARHYFEKAQAAGFMPSKLALG 840
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 33/250 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAV 165
+ G + + +A FL A + S A G++Y E D EAA + YR+A
Sbjct: 556 LRDGLAGKADYKRARQLFLLAARQNSGDAQNSLGVLYEKGLGGETDPIEAA-AWYRKAIQ 614
Query: 166 LGDPAA------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
G+ +A Q + EEA++LL A AG +AQ LA +N +
Sbjct: 615 YGNDSARYNLGMLYYANRQFGSIEEALRLLQDAQSAGVAQAQTALARIYLSKENSHYNPE 674
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG-- 271
R+ AAE G A + +F L + QA +W+K+ A+ G +AQ G
Sbjct: 675 LGERFLREAAEQGGADAQALLGVLLTFKTPLKQDYEQALRWLKKGAEGGSPEAQFHLGYM 734
Query: 272 --LGLFTEGEMMKAVVYLELATRAG-ETAADHVKNVILQQLSATSRDRAMLVVDSWRA-- 326
LG+ +AV + A G AA+++ + Q DR + W
Sbjct: 735 LHLGVGLAPNAHRAVHWYRKAAEQGFAEAANNLGTLYFQ---GNGVDRDVFKAVEWYTRG 791
Query: 327 -----MPSLH 331
+P+LH
Sbjct: 792 AKLGHVPALH 801
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQ-------- 162
++ G+GV K+L++A + K A +G ++ G +Y + D E L +Q
Sbjct: 484 YRQGKGVEKDLNQAAQWYTKAAEQGDMVSQNWLGTLYLDGDGVEKNPQLAQQWYEKSAAQ 543
Query: 163 ---------AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A +L D A A+ + A +L A+ AQ L + +G G + +
Sbjct: 544 GYAFAQNNLAVMLRDGLAGKADYKRARQLFLLAARQNSGDAQNSLGVLYEKGLGGETDPI 603
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCY----SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
EAA WY +A + G A YN + Y FG S +A + ++ A G +AQ
Sbjct: 604 EAAAWYRKAIQYGNDSARYNLGMLYYANRQFG-----SIEEALRLLQDAQSAGVAQAQ 656
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
EA++ L A+ A RA Y+ + L + RW + AE G A + L
Sbjct: 280 EALEPLVSANRASVPRAAYRAGVALLKSGQGFVARSRGVRWLQKGAELGDANAQFRLGLA 339
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
Y+ GEG+ ++ +A W A++ G AQ L G E + KA + E A+
Sbjct: 340 YAQGEGVVVNPERAIYWYTLASEQGEVSAQFNLALLYYQGRLVEQDFTKARFWFEHASEQ 399
Query: 294 GETAA-DHVKNV 304
G+ A DH+ ++
Sbjct: 400 GDVQARDHLGDI 411
>gi|290986591|ref|XP_002676007.1| predicted protein [Naegleria gruberi]
gi|284089607|gb|EFC43263.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 99 REAMVLLRW-GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAI 157
+E + + + G + G G+ K++ KA F K A +G+ + E A
Sbjct: 57 KENLTIYNYLGNCYLEGSGLEKDIKKAQYWFEKSALKGNAYGQFGVASCHDENHSYTKAF 116
Query: 158 SLYRQAAVLGDPAA-------------QPANAEEAVKLLYQASIAGHVRAQYQLALCLHR 204
Y++AA GD A + ++ + +++ G AQY++ +
Sbjct: 117 EWYKKAADHGDSNALFNVAYCYEWGEGVEKDLSKSFEWFLKSAEKGDAEAQYRIGMRYTM 176
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
G+GV+ +L +A WY ++++ GY+ +M+ Y+ G+G ++ KW+ RA++
Sbjct: 177 GKGVERDLYKAFNWYYKSSKNGYINSMFQLGYMYASGKGTSFDGAKSLKWLSRASE 232
>gi|365920737|ref|ZP_09445058.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
gi|364577598|gb|EHM54855.1| Sel1 repeat protein [Cardiobacterium valvarum F0432]
Length = 170
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
AG QY L + GRGV + +A WY +AA GY A YN + + G G P +
Sbjct: 46 AGDALGQYNLGVLYSEGRGVPQDYAQARAWYEKAAVQGYAAAQYNLGIMCANGWGGPKDN 105
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAADHVKN 303
QAR W +RAA G KAQ G+ L+ +G + + A V+ E A G+ A
Sbjct: 106 GQARAWYERAAKQGDAKAQTNLGV-LYADGRAGVQDYVLARVWWEKAAAQGDAKA----Q 160
Query: 304 VILQQLS 310
+ LQ L
Sbjct: 161 IALQMLD 167
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
P + +A +A++ G+ AQY L + G G + +A WY RAA+ G +A
Sbjct: 66 PQDYAQARAWYEKAAVQGYAAAQYNLGIMCANGWGGPKDNGQARAWYERAAKQGDAKAQT 125
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N + Y+ G + AR W ++AA G KAQ+
Sbjct: 126 NLGVLYADGRAGVQDYVLARVWWEKAAAQGDAKAQI 161
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
A+ G YN + YS G G+P + QAR W ++AA G+ AQ G+
Sbjct: 44 AQAGDALGQYNLGVLYSEGRGVPQDYAQARAWYEKAAVQGYAAAQYNLGI 93
>gi|117923519|ref|YP_864136.1| Sel1 domain-containing protein [Magnetococcus marinus MC-1]
gi|117607275|gb|ABK42730.1| Sel1 domain protein repeat-containing protein [Magnetococcus
marinus MC-1]
Length = 358
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 153 KEAAISLYRQAAVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLA 199
+E A+ YR AA G+P A A +A +AV+L QA+ G RAQY L
Sbjct: 92 EEGAVYWYRLAAAQGEPKAMIALALKYRAGLGVKRDARQAVQLFRQAAELGDGRAQYYLG 151
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
L RG G+ + +AA+WY RAA G + A G+G+ AR W ++AA
Sbjct: 152 DHLARGEGIPRDGAQAAQWYERAARSGSLLAALALGQMLEQGKGVQADGAMARHWYEQAA 211
Query: 260 DCGHGKAQLEHGLGLFTEG 278
GH +AQ L ++ EG
Sbjct: 212 QGGHAEAQFRLAL-MWEEG 229
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
QA+ GH AQ++LAL GRG ++ A WY +AA G R N + G G
Sbjct: 209 QAAQGGHAEAQFRLALMWEEGRGGVRDVAVAVDWYRKAAAQGDTRGAVNLGYLLAHGVGA 268
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADH 300
P +QA +AA G A G +G + +++ A + LA + AD
Sbjct: 269 PRDEQQAVALYTQAAQGGSATAMYNLGVRYSMGSGVKQDLIAAYQWFHLAWQQHYKGADA 328
Query: 301 VKNVILQQL 309
+ + QL
Sbjct: 329 AREQVAMQL 337
>gi|323448016|gb|EGB03920.1| hypothetical protein AURANDRAFT_33364 [Aureococcus anophagefferens]
Length = 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 46 RFSCSRSIKSTEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLL 105
R C R I + GH P + + P L+ + + + EA+ L
Sbjct: 5 RACCCRVICDSCGHKIGDEPCPICRE-------PALKYEEELAVTRRHVENEVPEAIEFL 57
Query: 106 RWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAAIS 158
G ++ G G+ K+ +A F + GS AM + G +Y + D ++A
Sbjct: 58 --GICYRDGDYGLVKSGKRAAKLFKRAVELGSVDAMNNLGSLYDTGPCGVKRDSRKAN-Q 114
Query: 159 LYRQAAVLGDPAAQ---------------PANAEEAVKLLYQASIA-GHVRAQYQLALCL 202
L+R A+ GD AQ P E K Y+ S A G+ +AQ+ LA+ L
Sbjct: 115 LFRMASDRGDATAQFNLAQNLRIGDGVQAPDRTE--AKHWYERSAAQGYAKAQFSLAVML 172
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF-GEGLPLSHRQARKWMKRAADC 261
+ N++E+ R+Y AAE G++ + +N +CY + GEG+ + +A W +AA+
Sbjct: 173 DE----EQNVEESFRYYKLAAERGHILSQFNVGICYEYGGEGVDIDLAEAMTWYAQAAEQ 228
Query: 262 GHGKAQ 267
GH AQ
Sbjct: 229 GHKGAQ 234
>gi|258544763|ref|ZP_05704997.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519972|gb|EEV88831.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 329
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ A A+ A+ L Q + AG AQ++L + G+GV + +AA W+ RAA +V A
Sbjct: 40 AEQAAADSALTDLQQRAAAGDATAQFELGALYYLGQGVPQDYAQAAVWWERAATQDHVDA 99
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGE 279
+N Y G+G+ + QAR W ++AA G A +H LG L+ EG+
Sbjct: 100 QFNLGALYGEGQGVAQDYSQARAWYEKAA--AQGDASAQHNLGVLYAEGQ 147
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQ 195
E ++A++ +Q A GD AQ P + +A +A+ HV AQ
Sbjct: 41 EQAAADSALTDLQQRAAAGDATAQFELGALYYLGQGVPQDYAQAAVWWERAATQDHVDAQ 100
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
+ L G+GV + +A WY +AA G A +N + Y+ G+G+ + QAR W
Sbjct: 101 FNLGALYGEGQGVAQDYSQARAWYEKAAAQGDASAQHNLGVLYAEGQGVAQDYAQARAWF 160
Query: 256 KR 257
++
Sbjct: 161 EK 162
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 122 DKALDSFLKGAARGSTLAMVDAGLMYW-----EMDKKEAAISLYRQA------------A 164
D AL + AA G A + G +Y+ D +AA+ R A A
Sbjct: 46 DSALTDLQQRAAAGDATAQFELGALYYLGQGVPQDYAQAAVWWERAATQDHVDAQFNLGA 105
Query: 165 VLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAE 224
+ G+ + +A +A+ G AQ+ L + G+GV + +A W+ +AA
Sbjct: 106 LYGEGQGVAQDYSQARAWYEKAAAQGDASAQHNLGVLYAEGQGVAQDYAQARAWFEKAAA 165
Query: 225 GGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGE 279
A + + Y+ G G+ + QA W ++AA G+ AQ G L+ EG+
Sbjct: 166 QDDANAQNSLGILYNNGHGVAQDYAQAHTWYEKAAAKGNSHAQYNLGY-LYYEGK 219
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + +G GV ++ +A + K AA+G++ A + G +Y+E + Y QA
Sbjct: 176 GILYNNGHGVAQDYAQAHTWYEKAAAKGNSHAQYNLGYLYYE---GKGVTQDYGQARAWW 232
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A+ G AQY L + +G GV + + WY +AA GY
Sbjct: 233 E----------------KAAAQGDAGAQYNLGVLYAKGLGVAQDYGQTRTWYEKAAAQGY 276
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+A YN Y G+G+P ++ QAR W ++AA
Sbjct: 277 AQAQYNLGALYGNGQGVPKNNAQARLWWEKAA 308
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 23/170 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA---- 163
G + G+GV ++ +A + K AA+G A + G++Y E + Y QA
Sbjct: 104 GALYGEGQGVAQDYSQARAWYEKAAAQGDASAQHNLGVLYAE---GQGVAQDYAQARAWF 160
Query: 164 ---------------AVLGDPAAQPANAEEAVKLLYQASIA-GHVRAQYQLALCLHRGRG 207
+L + A Y+ + A G+ AQY L + G+G
Sbjct: 161 EKAAAQDDANAQNSLGILYNNGHGVAQDYAQAHTWYEKAAAKGNSHAQYNLGYLYYEGKG 220
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
V + +A W+ +AA G A YN + Y+ G G+ + Q R W ++
Sbjct: 221 VTQDYGQARAWWEKAAAQGDAGAQYNLGVLYAKGLGVAQDYGQTRTWYEK 270
>gi|410465884|ref|ZP_11319057.1| TPR repeat-containing protein, partial [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409981090|gb|EKO37711.1| TPR repeat-containing protein, partial [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 695
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 156 AISLYRQAAVLGDP--------------AAQPANAEEAVKLLYQASIAGHVRAQYQLALC 201
A++ YR+AA GD A +P + EA K QA+ G RAQ+ L L
Sbjct: 450 AVTYYREAANAGDLEAGFALGSLLSKGLAGEP-DFVEARKWYEQAAAHGDARAQFNLGLM 508
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
G+G N EA RW L AA+GG A N + G G P ++A +W + AA
Sbjct: 509 YLTGKGGPVNDAEALRWMLEAAKGGDPHARSNVATMTLTGRGTPSDPKEAFRWYRLAAGQ 568
Query: 262 GHGKAQLEHGLGLFTEGEMMK-----AVVYLELATRA-GETA----ADHVKNVILQQLSA 311
G+ +AQ G + EG ++ A+ +L LA+RA G A A K V+ ++L+
Sbjct: 569 GYAQAQAMLA-GFYYEGRVVPRDFESALFWLTLASRAPGGDALLQRAARAKAVLEKRLTP 627
Query: 312 TSRDRAMLVVDSWRAMP 328
+R + +++ P
Sbjct: 628 DQLERVSARLAAYKPAP 644
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +AV +A+ AG + A + L L +G + + EA +WY +AA G RA +N
Sbjct: 445 ANLAKAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFVEARKWYEQAAAHGDARAQFN 504
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCG 262
L Y G+G P++ +A +WM AA G
Sbjct: 505 LGLMYLTGKGGPVNDAEALRWMLEAAKGG 533
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 44/86 (51%)
Query: 159 LYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARW 218
L R A + D PA+ +A L +AS AGH A Y L L G+GV EAAR
Sbjct: 216 LTRLAELCADGRGVPADPAKAAALRRKASEAGHAPAAYDLGLMYLSGQGVTAYPLEAARL 275
Query: 219 YLRAAEGGYVRAMYNTSLCYSFGEGL 244
+ RAAE G+V AM Y GEG+
Sbjct: 276 FERAAEAGHVPAMLQLGDMYFDGEGV 301
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 57/146 (39%), Gaps = 43/146 (29%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
GDPAA A LL QA+ AG +A Y +AL G+GV N EA RW +AAE G
Sbjct: 373 GDPAAGAA-------LLSQAAWAGQPQAMYAMALLHLSGQGVSGNPAEAFRWCAKAAEAG 425
Query: 227 ---------------------------YVRAMYNTS-LCYSFGEGLPLSHR--------Q 250
Y R N L F G LS +
Sbjct: 426 VPEAKGLLAALSEEEFPSAANLAKAVTYYREAANAGDLEAGFALGSLLSKGLAGEPDFVE 485
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFT 276
ARKW ++AA G +AQ GL T
Sbjct: 486 ARKWYEQAAAHGDARAQFNLGLMYLT 511
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 154 EAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQY----------------- 196
+AA+SL QAA GDP A A + + L S AG R
Sbjct: 158 DAALSLLGQAAKAGDPQAATALGQTMLAL----SEAGDRRGGTPAEAAAWFEKAAAAGEA 213
Query: 197 ----QLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQAR 252
+LA GRGV + +AA +A+E G+ A Y+ L Y G+G+ +A
Sbjct: 214 EALTRLAELCADGRGVPADPAKAAALRRKASEAGHAPAAYDLGLMYLSGQGVTAYPLEAA 273
Query: 253 KWMKRAADCGHGKAQLEHGLGLFTEGE 279
+ +RAA+ GH A L+ G ++ +GE
Sbjct: 274 RLFERAAEAGHVPAMLQLG-DMYFDGE 299
>gi|332295410|ref|YP_004437333.1| serine/threonine protein kinase [Thermodesulfobium narugense DSM
14796]
gi|332178513|gb|AEE14202.1| serine/threonine protein kinase [Thermodesulfobium narugense DSM
14796]
Length = 582
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 23/191 (12%)
Query: 103 VLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY------WEMDKKEAA 156
VL G ++ G GV +N D A F + + +G+ A+ GLMY ++ DK A
Sbjct: 371 VLFEIGLKYLLGFGVTRNFDIAFKCFREASGKGNVEALYRLGLMYLHGQGTYQDDK--MA 428
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ A+ G+ A + + A K AS G+ A Y L L
Sbjct: 429 FKYFKDASEKGNADAMYRLGWMYEYGRGTSQDDKMAFKYFKDASEKGNADAMYHLGLMYL 488
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G+G + + A +++ A+E G AMY Y +G G + A+ W +++ D G+
Sbjct: 489 HGQGTYQDDKMAFKYFKDASEKGNADAMYRLGWMYEYGRGTSQDDKMAKYWYEKSKDLGN 548
Query: 264 --GKAQLEHGL 272
K +LE L
Sbjct: 549 IDSKNKLESFL 559
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N + A K +AS G+V A Y+L L G+G + + A +++ A+E G AMY
Sbjct: 388 NFDIAFKCFREASGKGNVEALYRLGLMYLHGQGTYQDDKMAFKYFKDASEKGNADAMYRL 447
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLGLFTEGEMMKAVVYLE 288
Y +G G + A K+ K A++ G+ A HG G + + +M A Y +
Sbjct: 448 GWMYEYGRGTSQDDKMAFKYFKDASEKGNADAMYHLGLMYLHGQGTYQDDKM--AFKYFK 505
Query: 289 LATRAGETAADHVKNVILQQLSATSRDRAM 318
A+ G A + + + TS+D M
Sbjct: 506 DASEKGNADAMYRLGWMYEYGRGTSQDDKM 535
>gi|212709556|ref|ZP_03317684.1| hypothetical protein PROVALCAL_00598 [Providencia alcalifaciens DSM
30120]
gi|212687894|gb|EEB47422.1| hypothetical protein PROVALCAL_00598 [Providencia alcalifaciens DSM
30120]
Length = 353
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+K L A+ G V AQ+ LAL RG G+ N +A +W+++AA A Y + CY
Sbjct: 248 AIKWLTLAAEQGEVSAQFNLALIYARGDGITANQAKACQWFIKAANQNSRDAQYASGACY 307
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+G G+P + +A W + AA G +AQ
Sbjct: 308 QYGMGVPQNDNKALSWYRLAAKQGDERAQ 336
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ L + G+G + A +W AAE G V A +N +L Y+ G+G+ +
Sbjct: 223 GFSPAQNSLGMLYLAGQGTKRDTVSAIKWLTLAAEQGEVSAQFNLALIYARGDGITANQA 282
Query: 250 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A +W +AA+ AQ G G+ KA+ + LA + G+ A K VI
Sbjct: 283 KACQWFIKAANQNSRDAQYASGACYQYGMGVPQNDNKALSWYRLAAKQGDERAQ--KKVI 340
Query: 306 L 306
+
Sbjct: 341 I 341
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
K L + + +G AQ+ LA+ ++ G L AA WY +A + +A N +L Y
Sbjct: 36 KTLTELAHSGQAEAQFNLAM-FYQSHG---QLDNAAYWYKLSASQQFTKAQINLALMYQQ 91
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQL 268
G G+ + ++ +WM+ AA G Q+
Sbjct: 92 GVGIGKNEKEMLRWMEAAAKAGDPIGQM 119
>gi|306841654|ref|ZP_07474343.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2]
gi|306288267|gb|EFM59647.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2]
Length = 946
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +EA K A+ G AQY++ +G G+ NL++A WY AA+ G AM+N
Sbjct: 700 ANVKEAAKWYQLAADQGFAPAQYRIGSFNEKGLGMARNLEKAKNWYQLAADQGNASAMHN 759
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ ++ G + A +W AA+ G +Q G+ GL + ++ + L
Sbjct: 760 LAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFAL 819
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A AG+ A ++ I + L RA V+ W+A P
Sbjct: 820 AANAGDKDAAEKRDQIAKALKPEMLARAKGAVELWKAKP 858
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G+ A
Sbjct: 662 PSIPEEAGPAALREAAAKGDMRALFEIGNRYMEGRGVAANVKEAAKWYQLAADQGFAPAQ 721
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 278
Y G G+ + +A+ W + AAD G+ A H L LF G
Sbjct: 722 YRIGSFNEKGLGMARNLEKAKNWYQLAADQGNASAM--HNLAVLFATG 767
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G R+ GRGV N+ +A + A +G A G E + + R
Sbjct: 685 LFEIGNRYMEGRGVAANVKEAAKWYQLAADQGFAPAQYRIGSF------NEKGLGMAR-- 736
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
N E+A A+ G+ A + LA+ G + A RW+ AA
Sbjct: 737 -----------NLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 785
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
E G + YN + + G G+P++ ++ KW AA+ G A
Sbjct: 786 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDA 828
>gi|315454055|ref|YP_004074325.1| Sel1 domain-containing protein [Helicobacter felis ATCC 49179]
gi|315133107|emb|CBY83735.1| Sel1 domain protein repeat-containing protein [Helicobacter felis
ATCC 49179]
Length = 346
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 98 LREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KK 153
+ A+ + G + GRG++++ +A+D + K S V G +Y+
Sbjct: 37 MGSALSYYKLGAMYYSGRGMQQDYQEAVDYYKKAGQMESPDGYVHLGDIYYSGKGVPKDY 96
Query: 154 EAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL 200
A+S Y++A +GD A P + +A+ +A+ G V Y++
Sbjct: 97 TQALSYYKKAGEMGDGVAYERLGDIYVEGQSVPRDYAKAMDYYTKAAQNGDVDGYYKVGS 156
Query: 201 CLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 260
+ G+GV + +A +Y +AAE G + Y+ + Y G+G+P+ ++A + K+AA
Sbjct: 157 LYYNGQGVPQDYAKAIDYYKKAAEEGSAVSYYSLGVMYRNGQGVPIDFQKAFGYYKQAAK 216
Query: 261 CGHGKAQLEHGLG 273
G KA + GLG
Sbjct: 217 MGSAKAYV--GLG 227
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAIS 158
+ G + +G+GV ++ KA+D + K A GS ++ G+MY +D ++A
Sbjct: 151 YYKVGSLYYNGQGVPQDYAKAIDYYKKAAEEGSAVSYYSLGVMYRNGQGVPIDFQKA-FG 209
Query: 159 LYRQAAVLGD-----------------PAAQPANAEEAVKLLYQASIAGHVRAQYQLA-L 200
Y+QAA +G P P + ++AV+ +A G A L +
Sbjct: 210 YYKQAAKMGSAKAYVGLGDLYSVEGGAPGGVPRDYKKAVEYYLKAGAMGDGVAYRILGDM 269
Query: 201 CLHRGRGVDFNL----QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMK 256
+ G V+ L ++AA +Y +A E G A Y G+G+P +A+++ K
Sbjct: 270 YISGGSPVEGGLPKDDRKAAEYYQKAGEMGESSAYAMLGDMYQDGQGVPRDLDRAKEYYK 329
Query: 257 RAADCGH 263
+A D G+
Sbjct: 330 KACDMGY 336
>gi|113460459|ref|YP_718521.1| TPR repeat-containing protein [Haemophilus somnus 129PT]
gi|112822502|gb|ABI24591.1| conserved hypothetical protein, with TPR repeat (tetratrico peptide
repeat) [Haemophilus somnus 129PT]
Length = 252
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G +K GRGV ++ +A+ + K A +G A + GLMY + AI Y +A
Sbjct: 64 GVMYKKGRGVAQSDTQAVYWWKKAAEQGLADAQYNLGLMYKKGRGVAQSDTQAIYWYTKA 123
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ N ++AV +A+ G + Q L L GR V
Sbjct: 124 AEQGIAEAQSKLGGMYAKGRGVTQNYQQAVYWFTKAAEQGDAKVQLLLGLMYENGRSVTQ 183
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
N Q+A WY +AAE G A + Y FG G+ + A+++ +A D G+
Sbjct: 184 NYQQAVYWYTKAAEQGIAEAQLYLGVMYEFGRGVQKNVSTAKEFYGKACDNGN 236
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N A L Q + G AQY L + +GRGV + +A W+ +AAE G A YN
Sbjct: 40 NYSAAFPLFKQLAEQGLANAQYNLGVMYKKGRGVAQSDTQAVYWWKKAAEQGLADAQYNL 99
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
L Y G G+ S QA W +AA+ G +AQ + G G++ +G
Sbjct: 100 GLMYKKGRGVAQSDTQAIYWYTKAAEQGIAEAQSKLG-GMYAKG 142
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 142 DAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASI 188
D + E AA L++Q A G AQ + +AV +A+
Sbjct: 30 DRAYQFIEQQNYSAAFPLFKQLAEQGLANAQYNLGVMYKKGRGVAQSDTQAVYWWKKAAE 89
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY L L +GRGV + +A WY +AAE G A Y+ G G+ ++
Sbjct: 90 QGLADAQYNLGLMYKKGRGVAQSDTQAIYWYTKAAEQGIAEAQSKLGGMYAKGRGVTQNY 149
Query: 249 RQARKWMKRAADCGHGKAQLEHGL 272
+QA W +AA+ G K QL GL
Sbjct: 150 QQAVYWFTKAAEQGDAKVQLLLGL 173
>gi|407771895|ref|ZP_11119240.1| Sel1 domain-containing protein [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285063|gb|EKF10574.1| Sel1 domain-containing protein [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 521
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 74/173 (42%), Gaps = 36/173 (20%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLG 167
+G G+ ++ +A++ K A A+ G+MY D EAA YR+AA LG
Sbjct: 281 YGDGMPQDFPRAMELARKAADHNHAGAINLIGVMYLNGSGVAPDATEAAYH-YRRAADLG 339
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
D V A LA C G GVD +L A WY +AA G
Sbjct: 340 D-----------------------VSAMVNLADCYLHGIGVDVSLPRAREWYEKAAADGD 376
Query: 228 VRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLG 273
A YN S Y G EG+ ARKWMK AA+ G A LE+G+G
Sbjct: 377 AYAQYNLSAIYQSGAEGIEPDPVLARKWMKLAAENGDPDAPYYYGHFLEYGIG 429
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
AA GD P + A++L +A+ H A + + G GV + EAA Y RA
Sbjct: 278 AAYYGD--GMPQDFPRAMELARKAADHNHAGAINLIGVMYLNGSGVAPDATEAAYHYRRA 335
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A+ G V AM N + CY G G+ +S +AR+W ++AA G AQ
Sbjct: 336 ADLGDVSAMVNLADCYLHGIGVDVSLPRAREWYEKAAADGDAYAQ 380
>gi|313892086|ref|ZP_07825682.1| Sel1 repeat protein [Dialister microaerophilus UPII 345-E]
gi|313119478|gb|EFR42674.1| Sel1 repeat protein [Dialister microaerophilus UPII 345-E]
Length = 409
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N E+A KL +A+ GH A Y+ A CL G+G + N+QEA WY +A E A Y+
Sbjct: 269 NPEKAFKLHKKAATLGHPDAMYKTAECLQSGQGCEKNIQEAINWYKKAYENHVSAAAYSL 328
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELA 290
+ Y GE + + A KW ++A+ G+ A GL G E + A+ +L A
Sbjct: 329 GMIYYTGEEIMENMETAIKWFMKSAEQGYVPAMYYLGLCFARGAGVEKDKDAALFWLYKA 388
Query: 291 TRAGETAA 298
GE A
Sbjct: 389 YLGGEHEA 396
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 154 EAAISLYRQAAVLGDPAAQPANAE-------------EAVKLLYQASIAGHVRAQ-YQLA 199
E A L+++AA LG P A AE EA+ Y+ + HV A Y L
Sbjct: 271 EKAFKLHKKAATLGHPDAMYKTAECLQSGQGCEKNIQEAINW-YKKAYENHVSAAAYSLG 329
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ + G + N++ A +W++++AE GYV AMY LC++ G G+ A W+ +A
Sbjct: 330 MIYYTGEEIMENMETAIKWFMKSAEQGYVPAMYYLGLCFARGAGVEKDKDAALFWLYKA 388
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 189 AGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
+G+V L C G G N ++A + + +AA G+ AMY T+ C G+G +
Sbjct: 247 SGNVFGIKYLGDCYENGIGTKINPEKAFKLHKKAATLGHPDAMYKTAECLQSGQGCEKNI 306
Query: 249 RQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
++A W K+A + A G+ +T E+M+
Sbjct: 307 QEAINWYKKAYENHVSAAAYSLGMIYYTGEEIME 340
>gi|205352572|ref|YP_002226373.1| hypothetical protein SG1357 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375123383|ref|ZP_09768547.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|205272353|emb|CAR37233.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627633|gb|EGE33976.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 439
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 258 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 317
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 318 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 377
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAADCG 262
GRGV N + A +WYL+AAE G A Y+ G +G+P ++QA W A+ G
Sbjct: 378 TGRGVPENSRNALKWYLKAAEQGVTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYG 437
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDK----KEAAISLYRQA 163
G + GR V+ + A+ K +GS + G Y + ++ A+ YR+A
Sbjct: 40 GSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKA 99
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASI----AGHVR-------AQYQLA 199
A LGD + Q P N + A++ +A+ AG VR AQ++L
Sbjct: 100 AELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLG 159
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
+ G+GV + Q+ A +AAE Y A + Y +GEG+ +RQA W+
Sbjct: 160 VMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVSQDYRQAVYWLNEG 218
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 288 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 347
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 348 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 378
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 173 PANAEEA--VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
P ++EE V+ L Q + G AQ+ L GR V + + A +W +A + G +
Sbjct: 12 PPDSEECQYVQELEQKAEQGDESAQFALGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFS 71
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEGEMMKAVVYLEL 289
+ Y++GE PLS ++A +W ++AA+ G Q G ++ +G + LE
Sbjct: 72 YFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEW 131
Query: 290 ATRAGETAADHVKNVILQQLSATS 313
+A D V+ Q SA+S
Sbjct: 132 YRKAASPTND--AGVVRGQGSASS 153
>gi|156378243|ref|XP_001631053.1| predicted protein [Nematostella vectensis]
gi|156218086|gb|EDO38990.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEA-A 156
+ G F+HG+GV K+L+ A + + A+ G A+ + L + E + K EA A
Sbjct: 11 LAQFNLGLCFEHGKGVDKDLNAAAECYKLAASLGHGGALYNLALYHMEGIGGLAKDEAKA 70
Query: 157 ISLYRQAAVLG-------------DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
+ L AA G D ++ + ++A L QA G A+Y L +C
Sbjct: 71 LELLELAAQSGTWKAQCYLGIYYADESSNHVDYDKAFSYLDQAVAKGDPTAEYYLGVCYE 130
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEG-LPLSHRQARKWMKRAADCG 262
RG GV+ N+ +A Y AA+ G + A +N + Y G G + ++A ++ + AA+ G
Sbjct: 131 RGLGVERNINKAGHLYKSAAKNGNISAQFNMGVFYEHGLGDYDVDRQEALRYYRMAAEAG 190
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGL 244
AS GH AQ+ L LC G+GVD +L AA Y AA G+ A+YN +L + G GL
Sbjct: 4 ASNNGHPLAQFNLGLCFEHGKGVDKDLNAAAECYKLAASLGHGGALYNLALYHMEGIGGL 63
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG----EMMKAVVYLELATRAGETAADH 300
+A + ++ AA G KAQ G+ E + KA YL+ A G+ A++
Sbjct: 64 AKDEAKALELLELAAQSGTWKAQCYLGIYYADESSNHVDYDKAFSYLDQAVAKGDPTAEY 123
Query: 301 VKNVILQQLSATSRD 315
V ++ R+
Sbjct: 124 YLGVCYERGLGVERN 138
>gi|323450420|gb|EGB06301.1| hypothetical protein AURANDRAFT_29473, partial [Aureococcus
anophagefferens]
Length = 366
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 21/185 (11%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQ---------PANAEEAVKLLYQASIAGHVRAQYQLA 199
++DKK+A LYR AA GD AQ E+AV+ A+ G+ A+ L
Sbjct: 51 KLDKKKAE-QLYRAAADRGDAVAQCNLGIFLDSGKKFEKAVRYFALAADQGYTDAELNLG 109
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC---------YSFGEGLPLSHRQ 250
C G G + +L +A W+ RAA G A+ T+L Y G G+ L ++
Sbjct: 110 CCYMDGEGTEVDLGKARYWFERAAAKGREEAI--TALAHLDAQLGRLYRTGSGVKLDKKK 167
Query: 251 ARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLS 310
A + + AAD G AQ + L +E + +A YL LA G TA +H + S
Sbjct: 168 AEQLYRTAADRGDAVAQSNLAVFLHSENKFEEAFRYLALAADQGWTAGEHNLGCCYRYGS 227
Query: 311 ATSRD 315
T D
Sbjct: 228 GTEVD 232
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 23/140 (16%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGST--------LAMVDAGLMYWEMDKKEAAISLYRQ 162
+++G G +L KA F + AA+GS LA +DA +DKK+A + L+R
Sbjct: 223 YRYGSGTEVDLGKARYWFERAAAKGSEEAINELAELAELDA-----RLDKKKA-MQLFRT 276
Query: 163 AAVLGDPAAQP---------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
AA GD AQ EEAV+ A+ G+ ++ L C + G G + +L
Sbjct: 277 AADRGDAVAQSNLGILLHSVEKFEEAVRCFVLAANQGYTDGEHNLGACFYDGIGTEVDLG 336
Query: 214 EAARWYLRAAEGGYVRAMYN 233
+A W RAA G A+ N
Sbjct: 337 KARFWLERAAAKGNELAIEN 356
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 40/167 (23%)
Query: 105 LRWGKRFKHGRGVRKNLDKALDSFLKGAARG-----STLAMVDA--GLMY-----WEMDK 152
L G + G G +L KA F + AA+G + LA +DA G +Y ++DK
Sbjct: 106 LNLGCCYMDGEGTEVDLGKARYWFERAAAKGREEAITALAHLDAQLGRLYRTGSGVKLDK 165
Query: 153 KEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
K+A LYR AA GD AQ LA+ LH +
Sbjct: 166 KKAE-QLYRTAADRGDAVAQS-----------------------NLAVFLHS----ENKF 197
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+EA R+ AA+ G+ +N CY +G G + +AR W +RAA
Sbjct: 198 EEAFRYLALAADQGWTAGEHNLGCCYRYGSGTEVDLGKARYWFERAA 244
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++AA+ + RA E G V AM + + + G G+ L ++A + + AAD G AQ G+
Sbjct: 19 KKAAKIWKRAVELGNVDAMRHLARLHETGSGVKLDKKKAEQLYRAAADRGDAVAQCNLGI 78
Query: 273 GLFTEGEMMKAVVYLELATRAGETAAD 299
L + + KAV Y LA G T A+
Sbjct: 79 FLDSGKKFEKAVRYFALAADQGYTDAE 105
>gi|306837317|ref|ZP_07470199.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653]
gi|306407594|gb|EFM63791.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653]
Length = 979
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +EA K A+ G AQY++ +G G+ NL++A WY AA+ G AM+N
Sbjct: 733 ANVKEAAKWYQLAADHGFAPAQYRIGSFNEKGLGMARNLEKAKNWYQLAADQGNASAMHN 792
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ ++ G + A +W AA+ G +Q G+ GL + ++ + L
Sbjct: 793 LAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFAL 852
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A AG+ A ++ I + L RA V+ W+A P
Sbjct: 853 AANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 891
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G+ A
Sbjct: 695 PSIPEEAGPAALREAAAKGDMRALFEIGNRYMEGRGVAANVKEAAKWYQLAADHGFAPAQ 754
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 278
Y G G+ + +A+ W + AAD G+ A H L LF G
Sbjct: 755 YRIGSFNEKGLGMARNLEKAKNWYQLAADQGNASAM--HNLAVLFATG 800
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G R+ GRGV N+ +A + A G A G E + + R
Sbjct: 718 LFEIGNRYMEGRGVAANVKEAAKWYQLAADHGFAPAQYRIGSF------NEKGLGMAR-- 769
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
N E+A A+ G+ A + LA+ G + A RW+ AA
Sbjct: 770 -----------NLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 818
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
E G + YN + + G G+P++ ++ KW AA+ G A
Sbjct: 819 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDA 861
>gi|423282497|ref|ZP_17261382.1| hypothetical protein HMPREF1204_00920 [Bacteroides fragilis HMW
615]
gi|404582065|gb|EKA86760.1| hypothetical protein HMPREF1204_00920 [Bacteroides fragilis HMW
615]
Length = 832
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G V ++ +KA D K A + AM GL Y V+G+P
Sbjct: 472 YENGEVVEQSYEKAFDLLQKAAGQEYPYAMYRVGL--------------YLDRGVIGEP- 516
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+EEA +A+ G A + L C G G + N +A W+ + AE R
Sbjct: 517 ----RSEEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEENPDKALEWFTKGAENNEPRC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y +G G+ + QA ++M +AA+ +G AQ + G F
Sbjct: 573 LTEMGLAYEYGSGIEENPHQAVEYMTKAAEQNYGYAQFKMGDYFF 617
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDK-ALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G F G G +K A++ + K A LAM+ G Y ++ DK E A S
Sbjct: 610 FKMGDYFFFGYGACPEDNKQAVEWYEKAVANDIPLAMLRMGEYYLYDYDKLNESEKAFSY 669
Query: 160 YRQAAV-------LGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+++AA LG N EA K A+ +G+V + Y+ LC + G GV
Sbjct: 670 FKKAAEAECYNEGLGICYEMGIGVEDNETEAFKYYTLAAGSGNVMSMYRTGLCYYNGVGV 729
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N EA RW+ AA V + Y +GEG +W+ +AA+ KAQ
Sbjct: 730 KQNYTEAYRWFNDAAGNDNVASYYYLGKMLMYGEGCVPDAEAGLQWLMKAAEHNSDKAQF 789
Query: 269 EHG 271
E G
Sbjct: 790 ELG 792
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
+ K A GS AMV+ +Y + E Y E+A LL +A+
Sbjct: 453 YEKAAELGSCFAMVELAFLY---ENGEVVEQSY----------------EKAFDLLQKAA 493
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
+ A Y++ L L RG + +EA WY +AAE G A++ CY G G +
Sbjct: 494 GQEYPYAMYRVGLYLDRGVIGEPRSEEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEEN 553
Query: 248 HRQARKWMKRAADCGHGKAQLEHGL 272
+A +W + A+ + E GL
Sbjct: 554 PDKALEWFTKGAENNEPRCLTEMGL 578
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 32/183 (17%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+D LN+ +F+ + +AA C +N+ L G ++ G GV N +A
Sbjct: 657 YDKLNESEKAFSYFK-KAAEAEC--YNEGL------------GICYEMGIGVEDNETEAF 701
Query: 126 DSFLKGAARGSTLAMVDAGLMY---------------WEMDK--KEAAISLYRQAAVLGD 168
+ A G+ ++M GL Y W D + S Y +L
Sbjct: 702 KYYTLAAGSGNVMSMYRTGLCYYNGVGVKQNYTEAYRWFNDAAGNDNVASYYYLGKMLMY 761
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+AE ++ L +A+ +AQ++L G GV+ N + A W+ +AAE G
Sbjct: 762 GEGCVPDAEAGLQWLMKAAEHNSDKAQFELGNAYLMGNGVEENDEIAMEWFEKAAENGNA 821
Query: 229 RAM 231
+A+
Sbjct: 822 KAL 824
>gi|416228537|ref|ZP_11627691.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
46P47B1]
gi|326563872|gb|EGE14123.1| tetratricopeptide repeat family protein [Moraxella catarrhalis
46P47B1]
Length = 297
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + G GVR++ KA + K A +G A + G+MY +K +S
Sbjct: 74 GAMYAEGDGVRQDYHKAFEWTTKAAHQGFAEAQFNLGVMY----RKGQGVS--------- 120
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ ++AV+ +A+ G +AQY L + +G+GV + ++ WY +AA+ GY
Sbjct: 121 ------QDDQKAVEWYTKAANQGDAQAQYNLGVMYAQGKGVRQDYYKSVEWYTKAAKQGY 174
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKR 257
A +N +L Y G+G+ + +A +W +
Sbjct: 175 ADAQFNLALMYYEGQGVRQDYHKAFEWFTK 204
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 166 LGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEG 225
L D Q N +A + +++ GH AQ L G GV + +A W +AA
Sbjct: 41 LADEYYQQGNHAKAFEWWQKSAHQGHAVAQTILGAMYAEGDGVRQDYHKAFEWTTKAAHQ 100
Query: 226 GYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV 285
G+ A +N + Y G+G+ ++A +W +AA+ G +AQ G+ ++ +G+ ++
Sbjct: 101 GFAEAQFNLGVMYRKGQGVSQDDQKAVEWYTKAANQGDAQAQYNLGV-MYAQGKGVRQDY 159
Query: 286 Y--LELATRA 293
Y +E T+A
Sbjct: 160 YKSVEWYTKA 169
>gi|422018504|ref|ZP_16365061.1| Sel1 domain-containing protein repeat-containing protein
[Providencia alcalifaciens Dmel2]
gi|414104796|gb|EKT66361.1| Sel1 domain-containing protein repeat-containing protein
[Providencia alcalifaciens Dmel2]
Length = 353
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 179 AVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCY 238
A+K L A+ G V AQ+ LAL RG G+ N +A +W+++AA A Y + CY
Sbjct: 248 AIKWLTLAAEQGEVSAQFNLALIYARGDGITANQAKACQWFIKAANQNSRDAQYASGACY 307
Query: 239 SFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+G G+P + +A W + AA G +AQ
Sbjct: 308 QYGMGVPQNDNKALSWYRLAAKQGDERAQ 336
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G AQ L + G+G + A +W AAE G V A +N +L Y+ G+G+ +
Sbjct: 223 GFSPAQNSLGMLYLAGQGTKRDTVSAIKWLTLAAEQGEVSAQFNLALIYARGDGITANQA 282
Query: 250 QARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
+A +W +AA+ AQ G G+ KA+ + LA + G+ A K VI
Sbjct: 283 KACQWFIKAANQNSRDAQYASGACYQYGMGVPQNDNKALSWYRLAAKQGDERAQ--KKVI 340
Query: 306 L 306
+
Sbjct: 341 I 341
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSF 240
K L + + +G AQ+ LA+ ++ G L +AA WY +A + +A N +L Y
Sbjct: 36 KTLTELAHSGQAEAQFNLAM-FYQSHG---QLDKAAYWYKLSASQQFTKAQINLALMYQQ 91
Query: 241 GEGLPLSHRQARKWMKRAADCGHGKAQL 268
G G+ + ++ +WM+ AA G Q+
Sbjct: 92 GVGIGKNEKEMLRWMEAAAKAGDPIGQM 119
>gi|400289068|ref|ZP_10791100.1| hypothetical protein PPAM21_13409 [Psychrobacter sp. PAMC 21119]
Length = 193
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ LA L +G G+ N Q+A +WY +AA+ G A N ++ Y GEG+ + +
Sbjct: 49 GNDHAQFYLAKRLQKGEGIAQNTQQAIQWYTKAAQQGVAPAQLNLAIMYLRGEGVQPNLQ 108
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE--MMKAVVYLELATRAG 294
QA+ W+++AA G +A + L L E + ++ A + +LA R G
Sbjct: 109 QAKVWLEKAAMRGDNRA--SYTLALLDEKQKNLVDAYKWYDLAARDG 153
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 23/120 (19%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
KR + G G+ +N +A+ + K A +G A ++ +MY L
Sbjct: 59 KRLQKGEGIAQNTQQAIQWYTKAAQQGVAPAQLNLAIMY------------------LRG 100
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
QP N ++A L +A++ G RA Y LAL + + NL +A +WY AA G +
Sbjct: 101 EGVQP-NLQQAKVWLEKAAMRGDNRASYTLALLDEKQK----NLVDAYKWYDLAARDGML 155
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G+ AQ N ++A++ +A+ G AQ LA+ RG GV NLQ+A W +AA G
Sbjct: 64 GEGIAQ--NTQQAIQWYTKAAQQGVAPAQLNLAIMYLRGEGVQPNLQQAKVWLEKAAMRG 121
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
RA Y +L + L A KW AA G
Sbjct: 122 DNRASYTLALLDEKQKNLV----DAYKWYDLAARDG 153
>gi|293418755|ref|ZP_06661190.1| ybeQ protein [Escherichia coli B088]
gi|300817836|ref|ZP_07098050.1| Sel1 repeat protein [Escherichia coli MS 107-1]
gi|300907822|ref|ZP_07125438.1| Sel1 repeat protein [Escherichia coli MS 84-1]
gi|301302126|ref|ZP_07208259.1| Sel1 repeat protein [Escherichia coli MS 124-1]
gi|415864168|ref|ZP_11537291.1| Sel1 repeat protein [Escherichia coli MS 85-1]
gi|415876291|ref|ZP_11542759.1| putative TPR repeat protein [Escherichia coli MS 79-10]
gi|291325283|gb|EFE64698.1| ybeQ protein [Escherichia coli B088]
gi|300400454|gb|EFJ83992.1| Sel1 repeat protein [Escherichia coli MS 84-1]
gi|300529533|gb|EFK50595.1| Sel1 repeat protein [Escherichia coli MS 107-1]
gi|300842678|gb|EFK70438.1| Sel1 repeat protein [Escherichia coli MS 124-1]
gi|315255050|gb|EFU35018.1| Sel1 repeat protein [Escherichia coli MS 85-1]
gi|342928778|gb|EGU97500.1| putative TPR repeat protein [Escherichia coli MS 79-10]
Length = 327
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA
Sbjct: 180 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQA------- 229
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 230 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 281 WYNLAIMYHYGEGRPVDLRQA 301
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 25 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 84
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 85 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 142
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|265985084|ref|ZP_06097819.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
gi|264663676|gb|EEZ33937.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
Length = 979
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
AN +EA K A+ G AQY++ +G G+ NL++A WY AA+ G AM+N
Sbjct: 733 ANVKEAAKWYQLAADHGFAPAQYRIGSFNEKGLGMARNLEKAKNWYQLAADQGNASAMHN 792
Query: 234 TSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLEL 289
++ ++ G + A +W AA+ G +Q G+ GL + ++ + L
Sbjct: 793 LAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFAL 852
Query: 290 ATRAGETAADHVKNVILQQLSATSRDRAMLVVDSWRAMP 328
A AG+ A ++ I + L RA V+ W+A P
Sbjct: 853 AANAGDKDAAEKRDQIAKALKPEMLTRAKGAVELWKAKP 891
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 173 PANAEEA-VKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P+ EEA L +A+ G +RA +++ GRGV N++EAA+WY AA+ G+ A
Sbjct: 695 PSIPEEAGPAALREAAAKGDMRALFEIGNRYMEGRGVAANVKEAAKWYQLAADHGFAPAQ 754
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLG-LFTEG 278
Y G G+ + +A+ W + AAD G+ A H L LF G
Sbjct: 755 YRIGSFNEKGLGMARNLEKAKNWYQLAADQGNASAM--HNLAVLFATG 800
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
L G R+ GRGV N+ +A + A G A G E + + R
Sbjct: 718 LFEIGNRYMEGRGVAANVKEAAKWYQLAADHGFAPAQYRIGSF------NEKGLGMAR-- 769
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAA 223
N E+A A+ G+ A + LA+ G + A RW+ AA
Sbjct: 770 -----------NLEKAKNWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAA 818
Query: 224 EGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
E G + YN + + G G+P++ ++ KW AA+ G A
Sbjct: 819 ELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKDA 861
>gi|417637968|ref|ZP_12288138.1| hypothetical protein ECTX1999_0671 [Escherichia coli TX1999]
gi|419168624|ref|ZP_13713021.1| sel1 repeat family protein [Escherichia coli DEC7A]
gi|419179618|ref|ZP_13723243.1| sel1 repeat family protein [Escherichia coli DEC7C]
gi|419185180|ref|ZP_13728702.1| sel1 repeat family protein [Escherichia coli DEC7D]
gi|419190426|ref|ZP_13733894.1| sel1 repeat family protein [Escherichia coli DEC7E]
gi|420384273|ref|ZP_14883659.1| sel1 repeat family protein [Escherichia coli EPECa12]
gi|345395261|gb|EGX25010.1| hypothetical protein ECTX1999_0671 [Escherichia coli TX1999]
gi|378018489|gb|EHV81346.1| sel1 repeat family protein [Escherichia coli DEC7A]
gi|378028079|gb|EHV90704.1| sel1 repeat family protein [Escherichia coli DEC7C]
gi|378032598|gb|EHV95179.1| sel1 repeat family protein [Escherichia coli DEC7D]
gi|378042529|gb|EHW04978.1| sel1 repeat family protein [Escherichia coli DEC7E]
gi|391309109|gb|EIQ66786.1| sel1 repeat family protein [Escherichia coli EPECa12]
Length = 327
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 180 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 229
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 230 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 281 WYNLAIMYHYGEGRPVDLRQA 301
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 25 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 84
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 85 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 142
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|342904365|ref|ZP_08726166.1| TPR repeat, SEL1 subfamily [Haemophilus haemolyticus M21621]
gi|341953605|gb|EGT80109.1| TPR repeat, SEL1 subfamily [Haemophilus haemolyticus M21621]
Length = 255
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G AA + + A KL + G+ +AQ+ L + G+GV + EA +WY +AAE G
Sbjct: 36 GVEAATRGDYQTAFKLWLSLAEQGNAKAQFNLGVMYEVGQGVKQDDFEAVKWYRKAAEQG 95
Query: 227 YVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
V A +N + Y G+G+ +A KW ++AA+ G AQ G ++ +G +K
Sbjct: 96 IVDAQFNLGVMYGVGQGVKQDDFEAVKWYRKAAEQGLANAQNNLG-NMYVKGRGVK 150
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G+GV+++ +A+ + K A +G A + G+MY G
Sbjct: 68 GVMYEVGQGVKQDDFEAVKWYRKAAEQGIVDAQFNLGVMY-------------------G 108
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ EAVK +A+ G AQ L +GRGV + EA +W+ +AAE G
Sbjct: 109 VGQGVKQDDFEAVKWYRKAAEQGLANAQNNLGNMYVKGRGVKQDDFEAVKWFRKAAEQGN 168
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+A + L Y+ G G+ + ++ KW+K+AA+ G QL+ G F
Sbjct: 169 AQAQESLGLMYANGRGVKQDYAESVKWVKKAAENGSADGQLKLGAAYF 216
>gi|404487140|ref|ZP_11022327.1| hypothetical protein HMPREF9448_02788 [Barnesiella intestinihominis
YIT 11860]
gi|404335636|gb|EJZ62105.1| hypothetical protein HMPREF9448_02788 [Barnesiella intestinihominis
YIT 11860]
Length = 1892
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 24/208 (11%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEM 150
W + E + G ++ G GV+KN+ KA D + KGA G + + G + +
Sbjct: 884 WYEMGAKSNEPTCVFTLGLIYEEGDGVQKNILKAADWYQKGAQAGIPSCLYNLGKL---I 940
Query: 151 DKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
KE + E+ L+ QA+ +G+ AQ + G V+
Sbjct: 941 INKEIS-----------------GEEEKGFNLIQQAAESGYSFAQNYMGRAYRFGWYVNA 983
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N A W+ +AAE AM N YS+ +GL + + +A W K+AA+ H +A E
Sbjct: 984 NPVRATNWFTKAAEQNMPDAMCNLGDMYSYEDGLTIDYEKAFYWYKKAAETKHSRALTEL 1043
Query: 271 G----LGLFTEGEMMKAVVYLELATRAG 294
G G + KA+ Y + A G
Sbjct: 1044 GDMYYAGKGVRQDYQKAMEYYQKACDEG 1071
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW----EMDKKEAAISLYRQA 163
G + +GRG+ N KAL+ + K AA S + G +YW E+ E A+ ++A
Sbjct: 1562 GDMYFYGRGMAINQAKALELYKKAAALDSVYGFFNVGFLYWNGPEEIQDPEQALQYLKKA 1621
Query: 164 AVLGDPAAQP-------ANAEEAV-----KLLYQASI-AGHVRAQYQLALCLHRGRGVDF 210
+G A EE + K YQ + + A +AL G+GV
Sbjct: 1622 VQMGYTYALSFIGDIYRTGPEELIDYAEAKRYYQKGVDVNEINAIKGMALLYLLGQGVTQ 1681
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N A + +AA+ G AMY+ Y +GEG+P + + A +++ A D + A
Sbjct: 1682 NNAMGAFYLKKAADKGNAWAMYHLGRLYYYGEGIPRNPKLALDYLQMAYDANYPDACSLL 1741
Query: 271 GLGLFTEGE 279
GL L+ GE
Sbjct: 1742 GL-LYERGE 1749
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E A+ L A+ G A L G GVD + +++ W+ +AA+ A Y+ +
Sbjct: 770 ESAIAPLLLAAQMGESEAATHLGDLYFYGHGVDTDYEQSYYWFAKAAQSNNAYAQYSIAF 829
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG----LGLF-TEGEMMKAVVYLELAT 291
Y G+ + Q KWMK AA+ G+ +AQ G G F +M +A+ + E+
Sbjct: 830 MYIKGQFVEKDDTQVIKWMKLAAENGYTEAQKNMGEYYYYGSFGCRRDMKEAIKWYEMGA 889
Query: 292 RAGE 295
++ E
Sbjct: 890 KSNE 893
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 114 GRGVRKNLDKALDSFL--KGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAA 171
G+GV +N A+ +F K A +G+ AM G +Y+ Y +
Sbjct: 1676 GQGVTQN--NAMGAFYLKKAADKGNAWAMYHLGRLYY-----------YGEGI------- 1715
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
P N + A+ L A A + A L L RG G N++ A + Y+R E G ++M
Sbjct: 1716 -PRNPKLALDYLQMAYDANYPDACSLLGLLYERGEGTAPNIELANKLYIRGHELGDDQSM 1774
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE------HGLG 273
+ + Y G GLP +++A K +A + G+ A+++ HGLG
Sbjct: 1775 WYLACNYLDGNGLPKDYKRAEKLFIQAIERGNEPARIDLARMIFHGLG 1822
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 18/193 (9%)
Query: 91 WNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE- 149
W + + L G + G+GVR++ KA++ + K G A G MYW+
Sbjct: 1027 WYKKAAETKHSRALTELGDMYYAGKGVRQDYQKAMEYYQKACDEGYPYAFYSLGFMYWKG 1086
Query: 150 ---MDKKEAAISLYRQAAVLGDPAA-----QPANAEEAVKLLYQASIAGHVRAQYQLALC 201
+ KE A QAA +G+ +A + + E K + + ++ AQ LA
Sbjct: 1087 QGTLPDKEKAQEYLSQAAAMGNESAFQLLNRMDHESEEEKDIDPFARQAYLEAQQALA-- 1144
Query: 202 LHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 261
D ++ ++A GYV+A+ + Y GE P +A ++ +A+
Sbjct: 1145 -------DKETEKYINLLSQSANLGYVQALNDLGDLYFNGELAPKHMGKAYEYFLKASQN 1197
Query: 262 GHGKAQLEHGLGL 274
G G G L
Sbjct: 1198 GSGYGSYSCGFIL 1210
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ ++ G V N +A + F K A + AM + G MY E +++
Sbjct: 972 GRAYRFGWYVNANPVRATNWFTKAAEQNMPDAMCNLGDMY----SYEDGLTI-------- 1019
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ E+A +A+ H RA +L + G+GV + Q+A +Y +A + GY
Sbjct: 1020 -------DYEKAFYWYKKAAETKHSRALTELGDMYYAGKGVRQDYQKAMEYYQKACDEGY 1072
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
A Y+ Y G+G +A++++ +AA G+ A
Sbjct: 1073 PYAFYSLGFMYWKGQGTLPDKEKAQEYLSQAAAMGNESA 1111
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 99 REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGST-LAMVDAGLMYWEMDKKEA-- 155
++ LL G ++ G GV N+D A + + A + T +A G Y ++ E+
Sbjct: 1272 KDTDTLLHIGLIYESGLGVPLNIDLARRYYERAAEQDETGMAYNFLGGTYMNDEETESNE 1331
Query: 156 --AISLYRQAAVLGDPAAQ--------------PANAEEAVKLLYQASIAGHVRAQYQLA 199
A+ +++A LG+ A + ++LL +AS G+ +A Y+L
Sbjct: 1332 RKAVHYFQKAIELGNTNAMFRISYYLHNGKGGLQVDIPREIELLTEASKRGNHQATYRLG 1391
Query: 200 LCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
L G+ NL+ + +++ AA+ G + A+ Y FGE +P + +A A
Sbjct: 1392 LLFEDNESGMAQNLELSVKYFQLAADNGILAAINKMGELYLFGEVIPANLTKAISCFTAA 1451
Query: 259 ADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAA 298
++ G+GKA G+G E + KA+ Y A G A
Sbjct: 1452 SEQGYGKASYWLGRLHTDGIGQL-EKDTQKAMNYYRKAIEQGYEEA 1496
Score = 43.9 bits (102), Expect = 0.10, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 17/184 (9%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKK----EAA 156
A + G+ + +G G+ +N ALD A GL+Y + E A
Sbjct: 1699 AWAMYHLGRLYYYGEGIPRNPKLALDYLQMAYDANYPDACSLLGLLYERGEGTAPNIELA 1758
Query: 157 ISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
LY + LGD + P + + A KL QA G+ A+ LA +
Sbjct: 1759 NKLYIRGHELGDDQSMWYLACNYLDGNGLPKDYKRAEKLFIQAIERGNEPARIDLARMIF 1818
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
G G + Q+A E GY RA Y G G+ ++QA++ ++A D G+
Sbjct: 1819 HGLGTVQDPQKAYEIIKPCLEQGYGRAYMLMGEVYENGLGVEKDYKQAKELYQKALDLGY 1878
Query: 264 GKAQ 267
AQ
Sbjct: 1879 SFAQ 1882
Score = 42.4 bits (98), Expect = 0.33, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----WEMDKKEAAISLYRQA 163
GK + G+ +N +KA D F K A G++ A G MY + + A+S Y+ +
Sbjct: 287 GKVYYRGKLNERNYEKAFDWFSKAAESGNSYAQYLLGNMYENGTFVEQNYDTALSYYKNS 346
Query: 164 AV------LGDPA-------AQPANAEEAVKLLYQ-ASIAGHVRAQYQLALCLHRGRGVD 209
A +G+ A P N EEA K+ Q A + +LA + RG
Sbjct: 347 AAQNNIMAIGEMAFMKDNGYGMPMNKEEAEKIYLQLAEERDDEWSMIKLAY-IEMDRG-- 403
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
N +E +W +A E Y+ A + Y F E A K +++A + AQL
Sbjct: 404 -NSEERLKWIQKALEKEYIDAYFELGFFYQFDE--------AYKDLEKAQQSYYQAAQLG 454
Query: 270 HGLGL 274
+ G+
Sbjct: 455 NPDGM 459
Score = 37.4 bits (85), Expect = 9.7, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 18/144 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE---MDKKEA-AISLYRQA 163
G + +G GV + +++ F K A + A MY + ++K + I + A
Sbjct: 792 GDLYFYGHGVDTDYEQSYYWFAKAAQSNNAYAQYSIAFMYIKGQFVEKDDTQVIKWMKLA 851
Query: 164 AVLGDPAAQPANAE--------------EAVKLLYQASIAGHVRAQYQLALCLHRGRGVD 209
A G AQ E EA+K + + + L L G GV
Sbjct: 852 AENGYTEAQKNMGEYYYYGSFGCRRDMKEAIKWYEMGAKSNEPTCVFTLGLIYEEGDGVQ 911
Query: 210 FNLQEAARWYLRAAEGGYVRAMYN 233
N+ +AA WY + A+ G +YN
Sbjct: 912 KNILKAADWYQKGAQAGIPSCLYN 935
>gi|422763472|ref|ZP_16817227.1| Sel1 [Escherichia coli E1167]
gi|324116718|gb|EGC10633.1| Sel1 [Escherichia coli E1167]
Length = 325
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
>gi|323446085|gb|EGB02394.1| hypothetical protein AURANDRAFT_35292 [Aureococcus anophagefferens]
Length = 279
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 87/216 (40%), Gaps = 51/216 (23%)
Query: 135 GSTLAMVDAGLMY-----WEMDKKEAAISLYRQAAVLGDPAAQPANA---------EEAV 180
G +MV G MY ++DKK+A LYR AA G P AQ A EEA
Sbjct: 18 GDVRSMVSLGRMYEHGEGVKLDKKKAE-RLYRAAADRGHPDAQCNLAFLLDSEEKYEEAF 76
Query: 181 KLLYQASIAGHVRAQYQLALCLHRGRGVDFNL---------------------------- 212
++ G+ RA++ L C G+G + +L
Sbjct: 77 PYYALSADQGYTRAEHNLGCCYTLGKGTEVDLGKARYWFERAAAKGRKEAITALAALDAR 136
Query: 213 --------QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
EAAR YLRA E G V AM Y G G+ L ++A + + AAD G
Sbjct: 137 IRARIAAEHEAARIYLRAVELGDVDAMKYLGKLYWDGSGVKLDKKKAMQLFRTAADRGDA 196
Query: 265 KAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
AQ G+ L + + +AV Y LA G T +H
Sbjct: 197 VAQCNLGILLHSVEKFEEAVRYFVLAANQGYTDGEH 232
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 128 FLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ---------P 173
+L+ G AM G +YW+ +DKK+A + L+R AA GD AQ
Sbjct: 151 YLRAVELGDVDAMKYLGKLYWDGSGVKLDKKKA-MQLFRTAADRGDAVAQCNLGILLHSV 209
Query: 174 ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
EEAV+ A+ G+ ++ L C + G G + +L +A W RAA G AM N
Sbjct: 210 EKFEEAVRYFVLAANQGYTDGEHNLGACFYDGIGTEVDLGKARFWLERAAAKGNELAMEN 269
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 114 GRGVRKNLDKALDSFLKGAARG-----STLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
G+G +L KA F + AA+G + LA +DA + + EAA +Y +A LGD
Sbjct: 101 GKGTEVDLGKARYWFERAAAKGRKEAITALAALDARIRARIAAEHEAA-RIYLRAVELGD 159
Query: 169 PAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
A + ++A++L A+ G AQ L + LH +EA
Sbjct: 160 VDAMKYLGKLYWDGSGVKLDKKKAMQLFRTAADRGDAVAQCNLGILLHSVE----KFEEA 215
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
R+++ AA GY +N C+ G G + +AR W++RAA G+
Sbjct: 216 VRYFVLAANQGYTDGEHNLGACFYDGIGTEVDLGKARFWLERAAAKGN 263
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++ A+ Y RA E G VR+M + Y GEG+ L ++A + + AAD GH AQ
Sbjct: 5 KKTAKIYRRAVELGDVRSMVSLGRMYEHGEGVKLDKKKAERLYRAAADRGHPDAQCNLAF 64
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADH 300
L +E + +A Y L+ G T A+H
Sbjct: 65 LLDSEEKYEEAFPYYALSADQGYTRAEH 92
>gi|197106231|ref|YP_002131608.1| localization factor podJL (Polar organelle development protein)
[Phenylobacterium zucineum HLK1]
gi|196479651|gb|ACG79179.1| localization factor podJL (Polar organelle development protein)
[Phenylobacterium zucineum HLK1]
Length = 702
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 190 GHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G+ AQ+ LA GR GV NL EA RW RAAEGG AM+N L + GEG P
Sbjct: 574 GYAPAQFYLAQLYESGRLGVVQNLAEARRWTARAAEGGEPNAMHNLGLYFFRGEGGPQDL 633
Query: 249 RQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGE----TAADH 300
A +W ++AA+ G +Q GL G + + +A+ + LA G+ TAA+
Sbjct: 634 ASAAQWFRKAAEAGVVDSQYNLGLMYQAGSGVQRDPAEALKWFSLAAAQGDGLARTAAEG 693
Query: 301 VK 302
+K
Sbjct: 694 LK 695
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EA + +A+ G A + L L RG G +L AA+W+ +AAE G V + YN
Sbjct: 596 NLAEARRWTARAAEGGEPNAMHNLGLYFFRGEGGPQDLASAAQWFRKAAEAGVVDSQYNL 655
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
L Y G G+ +A KW AA G G A
Sbjct: 656 GLMYQAGSGVQRDPAEALKWFSLAAAQGDGLA 687
>gi|290983842|ref|XP_002674637.1| sel1-like repeat domain-containing protein [Naegleria gruberi]
gi|284088228|gb|EFC41893.1| sel1-like repeat domain-containing protein [Naegleria gruberi]
Length = 286
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA---------N 175
+D F++ A S L AG + + LY +AA LG +Q + +
Sbjct: 82 VDLFVEIADTHSPLFFRKAGNIMYANKMNSKGFDLYLKAAELGHSLSQYSIGREFEFRKD 141
Query: 176 AEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTS 235
EA K +AS G V++Q +L +G+G + N+++A W ++AA+ G+VRA YN S
Sbjct: 142 YNEAFKWFSKASQQGIVKSQCKLGSFYAKGKGTEKNVRKAFEWTIKAAKKGHVRAQYNLS 201
Query: 236 LCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRA 293
+ + G + W+++AA H +A + G+ L E LEL RA
Sbjct: 202 ILFRVEPGYEDKEMKIF-WLEKAAQQDHPRAINDLGVSLTCGDEFEDLERALELFKRA 258
>gi|193069119|ref|ZP_03050077.1| hypothetical protein EcE110019_3243 [Escherichia coli E110019]
gi|419863489|ref|ZP_14386017.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli O103:H25 str. CVM9340]
gi|192957663|gb|EDV88108.1| hypothetical protein EcE110019_3243 [Escherichia coli E110019]
gi|388342372|gb|EIL08407.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli O103:H25 str. CVM9340]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|427803717|ref|ZP_18970784.1| hypothetical protein BN16_11231 [Escherichia coli chi7122]
gi|427808308|ref|ZP_18975373.1| hypothetical protein BN17_04311 [Escherichia coli]
gi|412961899|emb|CCK45810.1| hypothetical protein BN16_11231 [Escherichia coli chi7122]
gi|412968487|emb|CCJ43110.1| hypothetical protein BN17_04311 [Escherichia coli]
Length = 327
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA
Sbjct: 180 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQA------- 229
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 230 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 281 WYNLAIMYHYGEGRPVDLRQA 301
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQA 163
+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+ A
Sbjct: 72 QKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQIA 128
Query: 164 AVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 129 AESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQ 188
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 189 NETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 25 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLEQKYTEDKSRHKDN 84
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 85 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 142
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|332281785|ref|ZP_08394198.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104137|gb|EGJ07483.1| conserved hypothetical protein [Shigella sp. D9]
Length = 327
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA
Sbjct: 180 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQA------- 229
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 230 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 281 WYNLAIMYHYGEGRPVDLRQA 301
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 25 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 84
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 85 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 142
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|218553186|ref|YP_002386099.1| hypothetical protein ECIAI1_0628 [Escherichia coli IAI1]
gi|417135759|ref|ZP_11980544.1| Sel1 repeat protein [Escherichia coli 5.0588]
gi|417167581|ref|ZP_12000363.1| Sel1 repeat protein [Escherichia coli 99.0741]
gi|419929009|ref|ZP_14446706.1| hypothetical protein EC5411_12283 [Escherichia coli 541-1]
gi|218359954|emb|CAQ97498.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|386153613|gb|EIH04902.1| Sel1 repeat protein [Escherichia coli 5.0588]
gi|386171299|gb|EIH43344.1| Sel1 repeat protein [Escherichia coli 99.0741]
gi|388404403|gb|EIL64866.1| hypothetical protein EC5411_12283 [Escherichia coli 541-1]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|406914641|gb|EKD53799.1| Sel1 protein [uncultured bacterium]
Length = 231
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G + G+ V++N KA + + + A A + GLMY + + AI Y +A
Sbjct: 26 GHLYFSGKTVKQNYTKAFEYYERSAKHLYATAQFNLGLMYANGFGVLQNRTLAIEWYLKA 85
Query: 164 AVLGDPAAQ----------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQ 213
A AQ P EA+ ++A+ + AQY L C G GV N
Sbjct: 86 AEQNYAPAQFNLACLYQSDPLTVHEAIDWYHKAAERDFLLAQYNLGWCYLHGFGVPRNEA 145
Query: 214 EAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL----- 268
A +W +AAE A + CY G GL + A +W K+AA G KA L
Sbjct: 146 LAIQWITKAAEHALPDAERELAECYFQGIGLNEDKQLAAEWFKKAALQGDVKAILQLAKM 205
Query: 269 -EHGLGLFTEGEMMKAVVYLELAT 291
E G G+ + E + AV+ ELAT
Sbjct: 206 FETGDGV-PQDEELSAVLLRELAT 228
>gi|417518043|ref|ZP_12180488.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353650150|gb|EHC92596.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
Length = 288
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 101 AMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAA 156
A V +G + +G + K+ + AL+ + + AA+G A G+M+ + + + A
Sbjct: 55 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 114
Query: 157 ISLYRQAAVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLH 203
++ YR+AA G PAAQ + +A+ +A+ +AQYQL +
Sbjct: 115 LAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYS 174
Query: 204 RGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKWMKRAA--- 259
G GV N + A +WYL+AAE G+ A Y+ G +G+P ++QA W A+
Sbjct: 175 TGSGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYT 234
Query: 260 -----DCGHGKAQLEHGLGLFTEGEMMKAVVYLELATR 292
DC A+ G T ++ + +L R
Sbjct: 235 EKSKDDCSALIAERNRLKGTLTPDQLSETYAAFDLIRR 272
>gi|115522741|ref|YP_779652.1| Sel1 domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115516688|gb|ABJ04672.1| Sel1 domain protein repeat-containing protein [Rhodopseudomonas
palustris BisA53]
Length = 1095
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 161 RQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRG 207
R AA+ GDP A AN EEA K +A+ AG V A +++ +G G
Sbjct: 878 RAAALKGDPNAAYEIGLRYAEARGVAANFEEAAKWYDRAAQAGIVPAIFRIGTLNEKGLG 937
Query: 208 VDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
V + A R+Y+ AAE G +AM+N ++ + G +++ A W ++AA+ G +Q
Sbjct: 938 VKKDPDAARRYYILAAERGNAKAMHNLAVMEADGGSRGANYKSAAHWFRKAAERGVADSQ 997
Query: 268 LEHGL----GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRAMLVVDS 323
G+ G+ E + ++ + LA G+ A ++ + ++L A S A L + +
Sbjct: 998 FNLGILYARGIGVEQNLAESFKWFSLAAAQGDQDAGRKRDDVGKKLDAQSLAAAKLAIQT 1057
Query: 324 WRAMP 328
+ P
Sbjct: 1058 FVPAP 1062
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
L A++ G A Y++ L RGV N +EAA+WY RAA+ G V A++ G
Sbjct: 877 LRAAALKGDPNAAYEIGLRYAEARGVAANFEEAAKWYDRAAQAGIVPAIFRIGTLNEKGL 936
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
G+ AR++ AA+ G+ KA H L +
Sbjct: 937 GVKKDPDAARRYYILAAERGNAKAM--HNLAVM 967
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 104 LLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQA 163
+ R G + G GV+K+ D A ++ A RG+ AM + +M
Sbjct: 925 IFRIGTLNEKGLGVKKDPDAARRYYILAAERGNAKAMHNLAVME---------------- 968
Query: 164 AVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY-LRA 222
D ++ AN + A +A+ G +Q+ L + RG GV+ NL E+ +W+ L A
Sbjct: 969 ---ADGGSRGANYKSAAHWFRKAAERGVADSQFNLGILYARGIGVEQNLAESFKWFSLAA 1025
Query: 223 AEG 225
A+G
Sbjct: 1026 AQG 1028
>gi|417152875|ref|ZP_11991666.1| Sel1 repeat protein [Escherichia coli 96.0497]
gi|417579917|ref|ZP_12230736.1| hypothetical protein ECSTECB2F1_0559 [Escherichia coli STEC_B2F1]
gi|417665768|ref|ZP_12315333.1| hypothetical protein ECSTECO31_0566 [Escherichia coli STEC_O31]
gi|422777324|ref|ZP_16830977.1| Sel1 [Escherichia coli H120]
gi|432804733|ref|ZP_20038678.1| hypothetical protein A1WA_00627 [Escherichia coli KTE91]
gi|432932989|ref|ZP_20132843.1| hypothetical protein A13E_01981 [Escherichia coli KTE184]
gi|433129011|ref|ZP_20314484.1| hypothetical protein WKG_00746 [Escherichia coli KTE163]
gi|433133827|ref|ZP_20319205.1| hypothetical protein WKI_00760 [Escherichia coli KTE166]
gi|433192601|ref|ZP_20376618.1| hypothetical protein WGU_00910 [Escherichia coli KTE90]
gi|323945119|gb|EGB41181.1| Sel1 [Escherichia coli H120]
gi|345343546|gb|EGW75932.1| hypothetical protein ECSTECB2F1_0559 [Escherichia coli STEC_B2F1]
gi|386169599|gb|EIH36107.1| Sel1 repeat protein [Escherichia coli 96.0497]
gi|397786692|gb|EJK97525.1| hypothetical protein ECSTECO31_0566 [Escherichia coli STEC_O31]
gi|431357196|gb|ELG43869.1| hypothetical protein A1WA_00627 [Escherichia coli KTE91]
gi|431457022|gb|ELH37365.1| hypothetical protein A13E_01981 [Escherichia coli KTE184]
gi|431651361|gb|ELJ18622.1| hypothetical protein WKG_00746 [Escherichia coli KTE163]
gi|431662421|gb|ELJ29196.1| hypothetical protein WKI_00760 [Escherichia coli KTE166]
gi|431720855|gb|ELJ84874.1| hypothetical protein WGU_00910 [Escherichia coli KTE90]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|262373885|ref|ZP_06067163.1| predicted protein [Acinetobacter junii SH205]
gi|262311638|gb|EEY92724.1| predicted protein [Acinetobacter junii SH205]
Length = 230
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
G GV KN++KA + F + A +G ++ + +MY+E I + +
Sbjct: 64 QGLGVPKNVEKAFNLFNQSAQKGYAPSLANLSIMYYE------GIGVQK----------- 106
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N E+ + +A+ AG +++Q+ L +G V + +AA WY ++A+ GY +
Sbjct: 107 --NPEKGFEYTKKAANAGDLQSQFNLGNAFRKGNFVKQDYTKAAFWYEKSAKAGYSFSQN 164
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA--QLEHGLGLFTEGEMMKA 283
L ++ G G+ + +A W+ +A+ G+ +A L++ +F EM KA
Sbjct: 165 EYGLLFAQGLGVEQDYYKAYAWISVSAETGNDQAIKNLKNFTQIFNIQEMKKA 217
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 118 RKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAE 177
+KN A DSF K A G+ A+ SLY Q LG P N E
Sbjct: 33 QKNYKVAFDSFEKSAKMGNVQAI-------------HYLASLYFQG--LG----VPKNVE 73
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
+A L Q++ G+ + L++ + G GV N ++ + +AA G +++ +N
Sbjct: 74 KAFNLFNQSAQKGYAPSLANLSIMYYEGIGVQKNPEKGFEYTKKAANAGDLQSQFNLGNA 133
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRA 293
+ G + + +A W +++A G+ +Q E+GL GL E + KA ++ ++
Sbjct: 134 FRKGNFVKQDYTKAAFWYEKSAKAGYSFSQNEYGLLFAQGLGVEQDYYKAYAWISVSAET 193
Query: 294 G-ETAADHVKNVILQQLSATSRDRAMLVVDSWRAM 327
G + A ++KN Q + +A + D ++ +
Sbjct: 194 GNDQAIKNLKN-FTQIFNIQEMKKAKELADQYKTL 227
>gi|432673620|ref|ZP_19909115.1| hypothetical protein A1YU_00172 [Escherichia coli KTE142]
gi|431217952|gb|ELF15438.1| hypothetical protein A1YU_00172 [Escherichia coli KTE142]
Length = 327
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA
Sbjct: 180 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQA------- 229
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 230 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 281 WYNLAIMYHYGEGRPVDLRQA 301
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 25 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 84
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 85 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 142
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|237748264|ref|ZP_04578744.1| LOW QUALITY PROTEIN: Sel1 repeat-containing protein [Oxalobacter
formigenes OXCC13]
gi|229379626|gb|EEO29717.1| LOW QUALITY PROTEIN: Sel1 repeat-containing protein [Oxalobacter
formigenes OXCC13]
Length = 311
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 141 VDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQAS 187
++ GL ++ + E A+ +++ +P Q P + ++A L +++
Sbjct: 46 IEKGLKLFKKQEYEKALPYFQKPVAQKNPDVQAALGYMYREGLAVPKDIQKAFDLFLESA 105
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
+ R QY + G V + ++A +WY+ AAE GY A YN + Y+ G G
Sbjct: 106 RQNNPRGQYGMGTMYDLGLIVKQDKEKAFKWYMYAAENGYKNAQYNIGIMYARGRGTKRD 165
Query: 248 HRQARKWMKRAADCGHGKAQLEHGLGLFTEG-----EMMKAVVYLELATRAGETAAD 299
+++AR+W ++A GH A GL L+ G + K+ EL TRA + D
Sbjct: 166 YKKAREWYEKAVLQGHKGAMTNLGL-LYYRGWGGPKDYAKSA---ELNTRAAKLGDD 218
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G V K++ KA D FL+ A + + G MY LG
Sbjct: 81 GYMYREGLAVPKDIQKAFDLFLESARQNNPRGQYGMGTMY-----------------DLG 123
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q + E+A K A+ G+ AQY + + RGRG + ++A WY +A G+
Sbjct: 124 LIVKQ--DKEKAFKWYMYAAENGYKNAQYNIGIMYARGRGTKRDYKKAREWYEKAVLQGH 181
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGL 274
AM N L Y G G P + ++ + RAA G AQ E+G G+
Sbjct: 182 KGAMTNLGLLYYRGWGGPKDYAKSAELNTRAAKLGDDIAQYNLARDYENGTGV 234
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G + GRG +++ KA + + K +G AM + GL+Y YR G
Sbjct: 153 GIMYARGRGTKRDYKKAREWYEKAVLQGHKGAMTNLGLLY------------YRG---WG 197
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
P +AE L +A+ G AQY LA G GV + ++A WY + AE G
Sbjct: 198 GPKDYAKSAE----LNTRAAKLGDDIAQYNLARDYENGTGVPKDYKQAVYWYFKGAENGN 253
Query: 228 VRAMYNTSLCYSFGE-GLPLSHRQARKWMKRAADC 261
AM Y GLP +A W ++A +
Sbjct: 254 AMAMERLYEAYHLNRLGLPRDDEKAHYWAEKARET 288
>gi|307312640|ref|ZP_07592272.1| Sel1 domain protein repeat-containing protein [Escherichia coli W]
gi|378713976|ref|YP_005278869.1| Sel1 domain-containing protein repeat-containing protein
[Escherichia coli KO11FL]
gi|386607982|ref|YP_006123468.1| hypothetical protein ECW_m0698 [Escherichia coli W]
gi|386702569|ref|YP_006166406.1| hypothetical protein KO11_20450 [Escherichia coli KO11FL]
gi|386708427|ref|YP_006172148.1| hypothetical protein WFL_03470 [Escherichia coli W]
gi|415827994|ref|ZP_11514716.1| hypothetical protein ECOK1357_1660 [Escherichia coli OK1357]
gi|417144332|ref|ZP_11986138.1| Sel1 repeat protein [Escherichia coli 1.2264]
gi|417230103|ref|ZP_12031689.1| Sel1 repeat protein [Escherichia coli 5.0959]
gi|417595576|ref|ZP_12246240.1| hypothetical protein EC30301_0703 [Escherichia coli 3030-1]
gi|425421292|ref|ZP_18802507.1| hypothetical protein EC01288_0664 [Escherichia coli 0.1288]
gi|432480036|ref|ZP_19722000.1| hypothetical protein A15U_01140 [Escherichia coli KTE210]
gi|432830610|ref|ZP_20064216.1| hypothetical protein A1YM_02415 [Escherichia coli KTE135]
gi|306907342|gb|EFN37847.1| Sel1 domain protein repeat-containing protein [Escherichia coli W]
gi|315059899|gb|ADT74226.1| conserved protein [Escherichia coli W]
gi|323185001|gb|EFZ70368.1| hypothetical protein ECOK1357_1660 [Escherichia coli OK1357]
gi|323379537|gb|ADX51805.1| Sel1 domain protein repeat-containing protein [Escherichia coli
KO11FL]
gi|345360098|gb|EGW92269.1| hypothetical protein EC30301_0703 [Escherichia coli 3030-1]
gi|383394096|gb|AFH19054.1| hypothetical protein KO11_20450 [Escherichia coli KO11FL]
gi|383404119|gb|AFH10362.1| hypothetical protein WFL_03470 [Escherichia coli W]
gi|386164215|gb|EIH26001.1| Sel1 repeat protein [Escherichia coli 1.2264]
gi|386206593|gb|EII11099.1| Sel1 repeat protein [Escherichia coli 5.0959]
gi|408347494|gb|EKJ61700.1| hypothetical protein EC01288_0664 [Escherichia coli 0.1288]
gi|431009885|gb|ELD24489.1| hypothetical protein A15U_01140 [Escherichia coli KTE210]
gi|431379859|gb|ELG64769.1| hypothetical protein A1YM_02415 [Escherichia coli KTE135]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|432984736|ref|ZP_20173470.1| hypothetical protein A175_01190 [Escherichia coli KTE215]
gi|433101548|ref|ZP_20287635.1| hypothetical protein WK5_02101 [Escherichia coli KTE145]
gi|431503266|gb|ELH82002.1| hypothetical protein A175_01190 [Escherichia coli KTE215]
gi|431619500|gb|ELI88421.1| hypothetical protein WK5_02101 [Escherichia coli KTE145]
Length = 149
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+ G GV++N +A + F K A++ A + G +Y+ + YRQA + A
Sbjct: 3 YYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYY---YGQGVTQSYRQAKDWFEKA 59
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+ GHV AQY L + G GV N Q+A WY +AA +A
Sbjct: 60 AEK----------------GHVDAQYNLGVIYENGEGVSQNYQQAKAWYEKAASQNDAQA 103
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
+ + G+G + +QAR + +R+ + G
Sbjct: 104 QFELGVMNELGQGESIDLKQARHYYERSCNNG 135
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +A + +A+ AQY L + G+GV + ++A W+ +AAE G+V A YN
Sbjct: 12 NFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAAEKGHVDAQYNL 71
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTE 277
+ Y GEG+ +++QA+ W ++AA +AQ E LG+ E
Sbjct: 72 GVIYENGEGVSQNYQQAKAWYEKAASQNDAQAQFE--LGVMNE 112
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 200 LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+ ++G GV N ++A W+ +AA A YN Y +G+G+ S+RQA+ W ++AA
Sbjct: 1 MLYYKGEGVKQNFRQAREWFEKAASQNQPNAQYNLGQIYYYGQGVTQSYRQAKDWFEKAA 60
Query: 260 DCGHGKAQLEHGLGLFTEGE 279
+ GH AQ G+ ++ GE
Sbjct: 61 EKGHVDAQYNLGV-IYENGE 79
>gi|323447117|gb|EGB03067.1| hypothetical protein AURANDRAFT_34508 [Aureococcus anophagefferens]
Length = 345
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 25/246 (10%)
Query: 89 KSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYW 148
K W A+ L ++R G ++ G GV+ + KA + A RG +A + G+
Sbjct: 76 KIWKRAV-ELGNVEAMVRLGYSYETGSGVKLDKKKAERLYRAAADRGHAVAQFNLGIRLH 134
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQ------------------ASIAG 190
+K E Y AA G NAE + Y+ A+ G
Sbjct: 135 SEEKHEEGFRYYALAADQG-----YTNAENNLGCCYERGKGTEVDLGKARYWFERAAAKG 189
Query: 191 HVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
H +A LAL RG G+ + ++AA+ Y RA E G V AM +G G+ L +
Sbjct: 190 HEKATQSLALAYRRGYFGLVQSDKKAAKIYRRAVELGNVDAMSRLGEMTEYGSGVKLDKK 249
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQL 309
+A + + AAD G AQ L +EG+ +A Y LA G+T + +
Sbjct: 250 KAERLYRAAADRGCAIAQSSLAYLLHSEGKCEEAFRYFALAANQGDTITESCLGCCYRDG 309
Query: 310 SATSRD 315
T D
Sbjct: 310 EGTEVD 315
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
++AA+ + RA E G V AM Y G G+ L ++A + + AAD GH AQ G+
Sbjct: 72 KKAAKIWKRAVELGNVEAMVRLGYSYETGSGVKLDKKKAERLYRAAADRGHAVAQFNLGI 131
Query: 273 GLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRD 315
L +E + + Y LA G T A++ ++ T D
Sbjct: 132 RLHSEEKHEEGFRYYALAADQGYTNAENNLGCCYERGKGTEVD 174
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 72/169 (42%), Gaps = 26/169 (15%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY-------WEMDKKEAAISLYRQA 163
++ G+G +L KA F + AA+G A L Y + DKK A I YR+A
Sbjct: 165 YERGKGTEVDLGKARYWFERAAAKGHEKATQSLALAYRRGYFGLVQSDKKAAKI--YRRA 222
Query: 164 AVLGDPAAQPANAE-----EAVKL-------LYQASIA-GHVRAQYQLALCLHRGRGVDF 210
LG+ A E VKL LY+A+ G AQ LA LH +
Sbjct: 223 VELGNVDAMSRLGEMTEYGSGVKLDKKKAERLYRAAADRGCAIAQSSLAYLLH----SEG 278
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAA 259
+EA R++ AA G CY GEG + +AR W +RAA
Sbjct: 279 KCEEAFRYFALAANQGDTITESCLGCCYRDGEGTEVDLGKARYWFERAA 327
>gi|191168687|ref|ZP_03030467.1| hypothetical protein EcB7A_4052 [Escherichia coli B7A]
gi|190901279|gb|EDV61048.1| hypothetical protein EcB7A_4052 [Escherichia coli B7A]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 125
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 126 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 185
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 186 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A + W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ---IAWDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGKPVDLRQA 299
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|443616681|ref|YP_007380537.1| hypothetical protein APECO78_06800 [Escherichia coli APEC O78]
gi|443421189|gb|AGC86093.1| hypothetical protein APECO78_06800 [Escherichia coli APEC O78]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA
Sbjct: 178 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQA------- 227
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 228 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQA 163
+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+ A
Sbjct: 70 QKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQIA 126
Query: 164 AVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDF 210
A G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 127 AESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQ 186
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 187 NETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 238
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 23 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLEQKYTEDKSRHKDN 82
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 83 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 140
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 141 MYRNGNGVAKDYAL 154
>gi|403383965|ref|ZP_10926022.1| hypothetical protein KJC30_04664 [Kurthia sp. JC30]
Length = 281
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + G GV +N+ +A D + A RG AM + M++ + E A +R+A
Sbjct: 103 GNLYYEGLGVEENIQRAFDCYEYAAKRGLADAMNNYADMHFRGETVPQNDEIAHHWFRKA 162
Query: 164 AVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLAL-CLHRGRGVD 209
A+LG A A+A++++ Q+++ G + A L + RG
Sbjct: 163 AMLGVSEAMFTMGYMFEKGVGVEADADQSIYWFEQSAMHGDLYAANYLGHKAMQRGE--- 219
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
+A WYL+AAEG V YN CY G G+ + ++A+ W +RAA G +A+
Sbjct: 220 --FDKAFIWYLQAAEGQDVEGEYNVGFCYEEGVGVGQNLQKAKYWYQRAALQGDDQAK 275
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
AS G++ A Y L + G GV+ N+Q A Y AA+ G AM N + + GE +P
Sbjct: 90 ASDQGYLAATYWLGNLYYEGLGVEENIQRAFDCYEYAAKRGLADAMNNYADMHFRGETVP 149
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGE-TAADH 300
+ A W ++AA G +A G G+ E + +++ + E + G+ AA++
Sbjct: 150 QNDEIAHHWFRKAAMLGVSEAMFTMGYMFEKGVGVEADADQSIYWFEQSAMHGDLYAANY 209
Query: 301 VKNVILQ 307
+ + +Q
Sbjct: 210 LGHKAMQ 216
>gi|289207633|ref|YP_003459699.1| Sel1 domain-containing protein repeat-containing protein
[Thioalkalivibrio sp. K90mix]
gi|288943264|gb|ADC70963.1| Sel1 domain protein repeat-containing protein [Thioalkalivibrio sp.
K90mix]
Length = 223
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 172 QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAM 231
QP N E A + +A+ AG A + LA+ +G GV + EAARW+ AAE G +AM
Sbjct: 55 QPRNPEAAARWYRRAAEAGFPDAAFNLAVLYEQGDGVAPDANEAARWFHVAAERGNAQAM 114
Query: 232 YNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK-----AVVY 286
+N L + G GLP QA +W AA+ G G+ G LF GE ++ A +
Sbjct: 115 FNLGLKFDEGRGLPQDAEQAAQWYLLAAEGGEGRGAANLGR-LFAMGEGVERSDVSAFKW 173
Query: 287 LELATRAGETAADHVKNVILQQLSATSR 314
+A G A + + ++LS R
Sbjct: 174 YAIAAEMGVANAARYRERVARELSPDER 201
>gi|309795488|ref|ZP_07689905.1| Sel1 repeat protein [Escherichia coli MS 145-7]
gi|308120863|gb|EFO58125.1| Sel1 repeat protein [Escherichia coli MS 145-7]
Length = 327
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 112 RGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 171
Query: 171 AQP------------ANAEEAVKLLY-QASIAGHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E Y +++ G+ AQ+Q+A + G GVD + ++A
Sbjct: 172 AQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 231
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G V A N Y G+G+ ++ A +W +AA+C A
Sbjct: 232 WYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKE-----AAISLYRQ 162
G+++ + K+ + A+ K A +G T A G W +D+ E A+ Y+
Sbjct: 71 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGEDPNYKEAVVWYQI 127
Query: 163 AAVLGDPAAQP-----------ANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVD 209
AA G AQ + A+ + QA++ GH AQ LA G+GV
Sbjct: 128 AAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVA 187
Query: 210 FNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCG 262
N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G
Sbjct: 188 QNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG 240
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA
Sbjct: 180 YEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQA------- 229
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+ +A+ G V A + G+GV+ + Q A W+ +AAE A
Sbjct: 230 ---------MYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 280
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 281 WYNLAIMYHYGEGKPVDLRQA 301
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLR-AAEGGYVRAMYNTSLCYSFGEGLPLSH 248
G AQY + +R +D E A ++L+ AAE G+ A Y+ Y+ + +
Sbjct: 25 GDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDN 84
Query: 249 RQARKWMKRAADCGHGKAQLEHGLG-LFTEGE---MMKAVVYLELATRAGETAADHVKNV 304
A W+K+AA GH A + LG + GE +AVV+ ++A +G + A +
Sbjct: 85 EHAIFWLKKAALQGHTFA--SNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGW 142
Query: 305 ILQQLSATSRDRAM 318
+ + + ++D A+
Sbjct: 143 MYRNGNGVAKDYAL 156
>gi|419764628|ref|ZP_14290868.1| hypothetical protein UUU_35490 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397743211|gb|EJK90429.1| hypothetical protein UUU_35490 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 440
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 149 EMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+M+K ++ I A+ A P N + +K + + +G AQ QL + G GV
Sbjct: 18 DMNKMKSVICFLALGAISPHAWATPNNDD--IKAMLSQAKSGDACAQTQLGILYAEGSGV 75
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
+ ++A W+ +A + Y A YN + Y G+G+ +++A W ++AA+ GH A+
Sbjct: 76 TRDYKKARSWFEQAGKQNYADAEYNLGVMYGNGDGVARDNKKALTWFEKAAEHGHIGARY 135
Query: 269 EHGL----GLFTEGEMMKAVVYLELATRAG 294
G+ G+ T + ++A + ELA + G
Sbjct: 136 NLGMIYSQGIGTAKDPVRATFWFELAGQDG 165
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISL 159
+A + G + G GV ++ KA F + + A + G+MY
Sbjct: 58 DACAQTQLGILYAEGSGVTRDYKKARSWFEQAGKQNYADAEYNLGVMYGN---------- 107
Query: 160 YRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWY 219
GD A+ + ++A+ +A+ GH+ A+Y L + +G G + A W+
Sbjct: 108 -------GDGVAR--DNKKALTWFEKAAEHGHIGARYNLGMIYSQGIGTAKDPVRATFWF 158
Query: 220 LRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A + G V Y + YS GE L + +AR+W +RAA+ GH AQ + +++EG
Sbjct: 159 ELAGQDGSVEDKYTLGVMYSKGEPLEKNDVKARQWFERAANEGHVLAQYNLAV-MYSEG 216
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMY----------------WEMD 151
G + +G GV ++ KAL F K A G A + G++Y +E+
Sbjct: 102 GVMYGNGDGVARDNKKALTWFEKAAEHGHIGARYNLGMIYSQGIGTAKDPVRATFWFELA 161
Query: 152 KKEAAISLYRQAAVL---GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
++ ++ V+ G+P + N +A + +A+ GHV AQY LA+ G G
Sbjct: 162 GQDGSVEDKYTLGVMYSKGEPLEK--NDVKARQWFERAANEGHVLAQYNLAVMYSEGLGG 219
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPL 246
D +LQ+A W +AA G A S+ G+ P
Sbjct: 220 DRDLQKARHWADKAAGQGDPEATRLLSVLNERGKQSPF 257
>gi|417958008|ref|ZP_12600925.1| hypothetical protein l13_13370 [Neisseria weaveri ATCC 51223]
gi|343967400|gb|EGV35645.1| hypothetical protein l13_13370 [Neisseria weaveri ATCC 51223]
Length = 468
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAM----VDAGLMY---WEMDKKEA----- 155
G +++G GV + + A + + + GS AM + L +E K++A
Sbjct: 285 GDIYRYGLGVPADHETAQQLYRRASDLGSNAAMQKLLAETALQTPEAYETLKQQALQRQH 344
Query: 156 AISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEA 215
Y++A ++P N ++A+ L +A+ AGH +AQ L + + G G + Q+A
Sbjct: 345 TEKTYQEAFANHYGLSRPQNHQQALALYTEAAEAGHAKAQTNLGMMYYNGHGTKQDAQQA 404
Query: 216 ARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A+W+ AA+ A YN + Y G G+ + +A +W++ A + GH
Sbjct: 405 AKWFHAAADQSDPTAQYNLACLYRHGHGVEQDNFRACQWLQNAINSGH 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 154 EAAISLYRQAAVLGDPAA-QPANAEEAVK-------LLYQASIAGHVRAQYQLALCLHRG 205
E A LYR+A+ LG AA Q AE A++ L QA H YQ A H G
Sbjct: 299 ETAQQLYRRASDLGSNAAMQKLLAETALQTPEAYETLKQQALQRQHTEKTYQEAFANHYG 358
Query: 206 RGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGK 265
N Q+A Y AAE G+ +A N + Y G G +QA KW AAD
Sbjct: 359 LSRPQNHQQALALYTEAAEAGHAKAQTNLGMMYYNGHGTKQDAQQAAKWFHAAADQSDPT 418
Query: 266 AQLE------HGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVI 305
AQ HG G+ E + +A +L+ A +G D ++ ++
Sbjct: 419 AQYNLACLYRHGHGV--EQDNFRACQWLQNAINSGHDHPDALQQLL 462
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 178 EAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYN 233
+A LL +A+ AGH+ A +QLA CL +L +A W +AA+ G+ A YN
Sbjct: 26 QATYLLQKAAYAGHIEAAFQLAGCLLSSTPTQADLNQAVYWLDKAAQTGHTYARYN 81
>gi|423220460|ref|ZP_17206955.1| hypothetical protein HMPREF1061_03728 [Bacteroides caccae
CL03T12C61]
gi|392623537|gb|EIY17640.1| hypothetical protein HMPREF1061_03728 [Bacteroides caccae
CL03T12C61]
Length = 832
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV ++ +KA + K A G AM GL Y + AVLG+
Sbjct: 472 YENGNGVERSYEKAFELCEKAAQEGYPYAMFRVGL--------------YLEKAVLGE-- 515
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A+P EEA +A++A + L C +G G + + +A W+ + AE R
Sbjct: 516 AKP---EEAFAWYTKAAMADENEGIFALGRCYKQGIGTEEDWDKALEWFGKGAEKNESRC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y G G+ + ++A ++M RAA+ +G AQ + G F
Sbjct: 573 LTELGLAYENGNGVEENPQKAVEYMTRAAEQDYGYAQFKMGDYYF 617
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N EA K A+ G+V + Y+ LC + G GV N EA RW+ AA + A Y
Sbjct: 696 NETEAFKYYTLAADNGNVTSMYRTGLCYYNGVGVKQNYAEAYRWFTDAAGNENIGAAYYL 755
Query: 235 SLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
+GEG A +W+ +AA+ + KAQ E G T
Sbjct: 756 GKMQMYGEGCTPDPEAAVQWLLKAAEKNNDKAQFELGNAYLT 797
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV N +A + A G+ +M GL Y+
Sbjct: 684 GICYEMGIGVEDNETEAFKYYTLAADNGNVTSMYRTGLCYY------------------- 724
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N EA + A+ ++ A Y L G G + + A +W L+AAE
Sbjct: 725 NGVGVKQNYAEAYRWFTDAAGNENIGAAYYLGKMQMYGEGCTPDPEAAVQWLLKAAEKNN 784
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A + Y G G+ + A +W ++AA+ G+ KA
Sbjct: 785 DKAQFELGNAYLTGNGVEENDDIAMEWFEKAAENGNEKA 823
>gi|303281979|ref|XP_003060281.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457752|gb|EEH55050.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 200
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 116 GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPA- 174
GV KN + A +GA G+ A D G+++++ + E A + ++A G P A+
Sbjct: 38 GVEKNDELARHWLERGAELGNFHAQCDLGVIHYDAGEYEVAREWFEKSAAQGHPIAEANL 97
Query: 175 ------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
N +AV+ L +A+ G AQ L L + +EA +W ++
Sbjct: 98 GVYYEKGHGVERNIPKAVEFLLRAAKKGCGDAQNNYGLLLSKEM---HEHEEAMKWLEKS 154
Query: 223 AEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 263
A GY AM N Y G+G+P + +AR+W ++AA+ GH
Sbjct: 155 AAQGYAEAMCNIGTLYHDGKGVPRNLLKAREWWQKAAERGH 195
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 26/131 (19%)
Query: 97 PLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAA 156
P+ EA + G ++ G GV +N+ KA++ L+ A +G A + GL+
Sbjct: 91 PIAEANL----GVYYEKGHGVERNIPKAVEFLLRAAKKGCGDAQNNYGLLL--------- 137
Query: 157 ISLYRQAAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAA 216
+ + EEA+K L +++ G+ A + H G+GV NL +A
Sbjct: 138 -------------SKEMHEHEEAMKWLEKSAAQGYAEAMCNIGTLYHDGKGVPRNLLKAR 184
Query: 217 RWYLRAAEGGY 227
W+ +AAE G+
Sbjct: 185 EWWQKAAERGH 195
>gi|425746702|ref|ZP_18864726.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
gi|425485341|gb|EKU51735.1| Sel1 repeat protein [Acinetobacter baumannii WC-323]
Length = 300
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 182 LLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG 241
L+ QA +G V AQY+LA + G+++N EA W+ RAA G AMY Y G
Sbjct: 31 LMVQAQ-SGDVNAQYELAKAYYFAEGLEWNYDEALTWFKRAAAQGNADAMYQVGYMYDLG 89
Query: 242 EGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT--EGEMMKAVVYLELATRAGETAAD 299
EG+ + A KW +AA+ G +AQ G + +G + +E TRA + D
Sbjct: 90 EGIEEDNLTAMKWYAQAAEKGQLRAQYSLGYLYLSDEDGVVTNLKKGVEWITRAADAGFD 149
Query: 300 HVKNVI 305
+ +
Sbjct: 150 VAQTTV 155
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 175 NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNT 234
N +EA+ +A+ G+ A YQ+ G G++ + A +WY +AAE G +RA Y+
Sbjct: 59 NYDEALTWFKRAAAQGNADAMYQVGYMYDLGEGIEEDNLTAMKWYAQAAEKGQLRAQYSL 118
Query: 235 SLCY-SFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYL 287
Y S +G+ + ++ +W+ RAAD G AQ E GL + ++ KA YL
Sbjct: 119 GYLYLSDEDGVVTNLKKGVEWITRAADAGFDVAQTTVGRMYEAGLKGLPQ-DLGKARHYL 177
Query: 288 ELATRAGETAA 298
+LA + G+ A
Sbjct: 178 QLAAQQGDATA 188
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 84 ASLVCKSW------NDALRPLREAMVL----------LRWGKRFKHGRGVRKNLDKALDS 127
A L+ SW +DA P R+A+++ K + G+ N D+AL
Sbjct: 9 AILLTSSWVNLSYADDA--PARQALMVQAQSGDVNAQYELAKAYYFAEGLEWNYDEALTW 66
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
F + AA+G+ AM G MY LG+ + + A+K QA+
Sbjct: 67 FKRAAAQGNADAMYQVGYMY-----------------DLGEGIEE--DNLTAMKWYAQAA 107
Query: 188 IAGHVRAQYQLA-LCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLP 245
G +RAQY L L L GV NL++ W RAA+ G+ A Y G +GLP
Sbjct: 108 EKGQLRAQYSLGYLYLSDEDGVVTNLKKGVEWITRAADAGFDVAQTTVGRMYEAGLKGLP 167
Query: 246 LSHRQARKWMKRAADCGHGKA 266
+AR +++ AA G A
Sbjct: 168 QDLGKARHYLQLAAQQGDATA 188
>gi|384412134|ref|YP_005621499.1| Sel1 domain-containing protein repeat-containing protein [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335932508|gb|AEH63048.1| Sel1 domain protein repeat-containing protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 264
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 75 SFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAAR 134
S + + +A +L+ ++ N P A+ G + G V + KAL + +
Sbjct: 51 SSNIDKSKALTLIQQAANKGFAPAEYAL-----GTFYYKGEAVAADKSKALYWYQQAVTH 105
Query: 135 GSTLAMVDAGLMYWEMDK----KEAAISLYRQAAVLGDPAAQ----------PANAEEAV 180
G A + G MY+ D K ++ LY+QAA G+ AQ A + +
Sbjct: 106 GDADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKA 165
Query: 181 KLLY---QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLC 237
K LY QA+ G+ +A+ L + G GV + +A WY +AA G +A +
Sbjct: 166 KALYWYQQAADKGNPQAELILGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIM 225
Query: 238 YSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
+ GEG+ + A W+K+AA+ G+ A+ +
Sbjct: 226 FYNGEGVTVDKNNAAYWLKQAANHGNDTAKYQ 257
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 110 RFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQAAV 165
++ HG + KAL + A +G A G Y++ + K A+ Y+QA
Sbjct: 45 KYAHGDSSNIDKSKALTLIQQAANKGFAPAEYALGTFYYKGEAVAADKSKALYWYQQAVT 104
Query: 166 LGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNL 212
GD A A + ++V L QA+ G+ +AQ L L RG V +
Sbjct: 105 HGDADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDK 164
Query: 213 QEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL 272
+A WY +AA+ G +A Y G+G+ + +A W ++AA+ HG AQ E L
Sbjct: 165 AKALYWYQQAADKGNPQAELILGNMYYNGDGVAVDKAKALSWYQQAAN--HGLAQAELAL 222
Query: 273 GL-FTEGEMM-----KAVVYLELATRAGETAADH 300
G+ F GE + A +L+ A G A +
Sbjct: 223 GIMFYNGEGVTVDKNNAAYWLKQAANHGNDTAKY 256
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 100 EAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEA 155
+A L G + +G + + K++D + + A +G+ A ++ GLM+ D K
Sbjct: 107 DADAALALGNMYYNGDSIAPDKSKSVDLYQQAANQGNAQAQLNLGLMFSRGDAVSLDKAK 166
Query: 156 AISLYRQAAVLGDPAAQ-------------PANAEEAVKLLYQASIAGHVRAQYQLALCL 202
A+ Y+QAA G+P A+ + +A+ QA+ G +A+ L +
Sbjct: 167 ALYWYQQAADKGNPQAELILGNMYYNGDGVAVDKAKALSWYQQAANHGLAQAELALGIMF 226
Query: 203 HRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYS 239
+ G GV + AA W +AA G A Y L ++
Sbjct: 227 YNGEGVTVDKNNAAYWLKQAANHGNDTAKYQLKLWFN 263
>gi|93005242|ref|YP_579679.1| hypothetical protein Pcryo_0412 [Psychrobacter cryohalolentis K5]
gi|92392920|gb|ABE74195.1| Sel1 [Psychrobacter cryohalolentis K5]
Length = 193
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
G+ AQ+ LA L +G G+ N ++A +WY +AA+ G A N ++ Y GEG+ + +
Sbjct: 49 GNDHAQFYLAKRLQKGEGIAQNTKQAVQWYTKAAQQGVAPAQLNLAIMYLRGEGVQPNLQ 108
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGE--MMKAVVYLELATRAG 294
QAR W+++AA G +A + L L E + ++ A + +LA R G
Sbjct: 109 QARGWLEKAAMRGDNRA--SYTLALLDEKQKNLVDAYKWYDLAARDG 153
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 23/120 (19%)
Query: 109 KRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGD 168
KR + G G+ +N +A+ + K A +G A ++ +MY L
Sbjct: 59 KRLQKGEGIAQNTKQAVQWYTKAAQQGVAPAQLNLAIMY------------------LRG 100
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
QP N ++A L +A++ G RA Y LAL + + NL +A +WY AA G +
Sbjct: 101 EGVQP-NLQQARGWLEKAAMRGDNRASYTLALLDEKQK----NLVDAYKWYDLAARDGML 155
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 167 GDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGG 226
G+ AQ N ++AV+ +A+ G AQ LA+ RG GV NLQ+A W +AA G
Sbjct: 64 GEGIAQ--NTKQAVQWYTKAAQQGVAPAQLNLAIMYLRGEGVQPNLQQARGWLEKAAMRG 121
Query: 227 YVRAMYNTSL 236
RA Y +L
Sbjct: 122 DNRASYTLAL 131
>gi|417688411|ref|ZP_12337655.1| hypothetical protein SB521682_0652 [Shigella boydii 5216-82]
gi|332094316|gb|EGI99367.1| hypothetical protein SB521682_0652 [Shigella boydii 5216-82]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 115 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPA 170
RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G
Sbjct: 110 RGEDPNYKEAIVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSD 169
Query: 171 AQPANA---EEAVKLLYQASIA----------GHVRAQYQLALCLHRGRGVDFNLQEAAR 217
AQ A E+ ++ ++A G+ AQ+Q+A + G GVD + ++A
Sbjct: 170 AQNNLADLYEDGKGVVQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMY 229
Query: 218 WYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
WYL+AA G + A N Y G+G+ ++ A +W +AA+C A
Sbjct: 230 WYLKAAAQGSIGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
++ G+GV +N A +LK A +G+ A W+ + E Y+QA A
Sbjct: 178 YEDGKGVVQNETLAAFWYLKSAQQGNRHAQFQIA---WDYNAGEGVDQDYKQAMYWYLKA 234
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
A Q SI +V Y G+GV+ + Q A W+ +AAE A
Sbjct: 235 AA------------QGSIGAYVNIGYMYK----HGQGVEKDYQAAFEWFTKAAECNDATA 278
Query: 231 MYNTSLCYSFGEGLPLSHRQA 251
YN ++ Y +GEG P+ RQA
Sbjct: 279 WYNLAIMYHYGEGRPVDLRQA 299
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 177 EEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSL 236
E A+ L +A++ GH A L L RG D N +EA WY AAE G A N
Sbjct: 83 EHAIFWLKKAALQGHTFASNALGWILDRGE--DPNYKEAIVWYQIAAESGMSYAQNNLGW 140
Query: 237 CYSFGEGLPLSHRQARKWMKRAADCGHGKAQ------LEHGLGLFTEGEMMKAVVYLELA 290
Y G G+ + A W K+AA GH AQ E G G+ + E + A YL+ A
Sbjct: 141 MYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGV-VQNETLAAFWYLKSA 199
Query: 291 TRAGETA 297
+ A
Sbjct: 200 QQGNRHA 206
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+++ + K+ + A+ K A +G T A G W +D+ E
Sbjct: 69 GQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALG---WILDRGE------------- 112
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
DP N +EA+ A+ +G AQ L G GV + A WY +AA G+
Sbjct: 113 DP-----NYKEAIVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGH 167
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLE 269
A N + Y G+G+ + A W ++A G+ AQ +
Sbjct: 168 SDAQNNLADLYEDGKGVVQNETLAAFWYLKSAQQGNRHAQFQ 209
>gi|290969941|ref|XP_002667993.1| predicted protein [Naegleria gruberi]
gi|284080968|gb|EFC35249.1| predicted protein [Naegleria gruberi]
Length = 164
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G +++G+G K+ KA++ FLK A G + + + G +Y G
Sbjct: 20 GCLYQNGQGATKDYSKAMEWFLKAAENGHSASYHNIGCLY-------------------G 60
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ +A++ ++ GH +Q+++ G+GV + ++A W+L+AAE G+
Sbjct: 61 YGQGVKQDYSKAMEYFLISTNNGHSISQFEIGFLYQNGQGVKQDYKKAMEWFLKAAEHGH 120
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQ 267
A + Y G+G+ + +A +W+ +AA+ G AQ
Sbjct: 121 SCAQFQIGWLYLIGKGVQHDYCKAMEWIIKAAENGSSAAQ 160
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 190 GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHR 249
GH +Q+++ G+G + +A W+L+AAE G+ + +N Y +G+G+ +
Sbjct: 11 GHSISQFEIGCLYQNGQGATKDYSKAMEWFLKAAENGHSASYHNIGCLYGYGQGVKQDYS 70
Query: 250 QARKWMKRAADCGHGKAQLEHGLGLFTEGEMMK 282
+A ++ + + GH +Q E G L+ G+ +K
Sbjct: 71 KAMEYFLISTNNGHSISQFEIGF-LYQNGQGVK 102
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 125 LDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLY 184
+D +LK A G +++ + G +Y + A Y +A ++
Sbjct: 1 MDWYLKAAENGHSISQFEIGCLY---QNGQGATKDYSKA----------------MEWFL 41
Query: 185 QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 244
+A+ GH + + + G+GV + +A ++L + G+ + + Y G+G+
Sbjct: 42 KAAENGHSASYHNIGCLYGYGQGVKQDYSKAMEYFLISTNNGHSISQFEIGFLYQNGQGV 101
Query: 245 PLSHRQARKWMKRAADCGHGKAQLEHG----LGLFTEGEMMKAVVYLELATRAGETAADH 300
+++A +W +AA+ GH AQ + G +G + + KA+ ++ A G +AA +
Sbjct: 102 KQDYKKAMEWFLKAAEHGHSCAQFQIGWLYLIGKGVQHDYCKAMEWIIKAAENGSSAAQN 161
Query: 301 VKN 303
N
Sbjct: 162 FIN 164
>gi|71417786|ref|XP_810657.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875222|gb|EAN88806.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 163 AAVLGDPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRA 222
A VL A + EA+ +L A GH A + LCL G GV +L+ A W R+
Sbjct: 159 AEVLLKRGANENDISEALSMLDDAVANGHTGAMLLVGLCLRDGIGVPKDLEAALVWVERS 218
Query: 223 AEGGYVRAMYNTSLCYSFG------EGLPLSHRQARKWMKRAADCGHGKAQLEHG 271
A+ GY AM+ + Y G LP +A +W K AAD GH AQL G
Sbjct: 219 ADAGYAPAMFELGVMYEDGVEDCGKSTLPADWGEAAEWYKGAADRGHTMAQLNLG 273
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 206 RGVDFN-LQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHG 264
RG + N + EA A G+ AM LC G G+P A W++R+AD G+
Sbjct: 165 RGANENDISEALSMLDDAVANGHTGAMLLVGLCLRDGIGVPKDLEAALVWVERSADAGYA 224
Query: 265 KAQLEHGLGLFTEG 278
A E G+ ++ +G
Sbjct: 225 PAMFELGV-MYEDG 237
>gi|299147085|ref|ZP_07040152.1| Sel1 repeat superfamily [Bacteroides sp. 3_1_23]
gi|298514970|gb|EFI38852.1| Sel1 repeat superfamily [Bacteroides sp. 3_1_23]
Length = 832
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV KN +K+ + K A +G AM GL Y + VLG+
Sbjct: 472 YENGDGVEKNYEKSFELISKAAEQGYPYAMFRVGL--------------YMEKGVLGE-- 515
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ A A + L C G G + N A W+ + AE R
Sbjct: 516 VKP---EEAFAWYTKAAEADDNDAIFALGRCYREGIGTEENWDRALEWFSKGAEKNEARC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ + Y G G+ + ++A ++M +AA+ +G AQ + G F
Sbjct: 573 LTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFKMGDYYF 617
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 98/270 (36%), Gaps = 61/270 (22%)
Query: 89 KSWNDALRPL------REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
++W+ AL EA L G +++G GV +N KA++ +K A + A
Sbjct: 552 ENWDRALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFK 611
Query: 143 AGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ------------------------- 172
G Y+ ++ + A+ Y +A P A
Sbjct: 612 MGDYYFFGCGPCLEDNKTAVEWYEKAVANEIPMAMLRVGEYYLYDYDSLNESEKAFAYFK 671
Query: 173 ----------------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
N EA K A+ G+ + Y+ LC + G GV
Sbjct: 672 KAAEYEWYSEGLGICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYYNGVGVKQ 731
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EA RW+ AA V A+Y +GEG A +W+ +AA+ + KAQ E
Sbjct: 732 NYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNNDKAQFEL 791
Query: 271 GLGLFTEGEMMKAVVYLELATRAGETAADH 300
G T + + E+A E AA+H
Sbjct: 792 GNAYLTGNGVEEND---EIAMEWFEKAAEH 818
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV +N +A + A G+T +M GL Y+
Sbjct: 684 GICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYY------------------- 724
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N EA + A+ +V A Y L + G G + + + A +W L+AAE
Sbjct: 725 NGVGVKQNYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNN 784
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A + Y G G+ + A +W ++AA+ G+ KA
Sbjct: 785 DKAQFELGNAYLTGNGVEENDEIAMEWFEKAAEHGNEKA 823
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
+G K+ K+ + + K A G+ A+V+ +Y D E
Sbjct: 438 NGYSGVKDPVKSREYYEKAAELGACFALVELAFLYENGDGVEK----------------- 480
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N E++ +L+ +A+ G+ A +++ L + +G + +EA WY +AAE A++
Sbjct: 481 --NYEKSFELISKAAEQGYPYAMFRVGLYMEKGVLGEVKPEEAFAWYTKAAEADDNDAIF 538
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
CY G G + +A +W + A+ + E G+ G E KAV Y+
Sbjct: 539 ALGRCYREGIGTEENWDRALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYM 597
>gi|423300208|ref|ZP_17278233.1| hypothetical protein HMPREF1057_01374 [Bacteroides finegoldii
CL09T03C10]
gi|408474017|gb|EKJ92539.1| hypothetical protein HMPREF1057_01374 [Bacteroides finegoldii
CL09T03C10]
Length = 619
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQA 163
G F+ G+GV ++ ++ + +G+++A + G++Y E E A+ YR++
Sbjct: 399 GDCFRLGQGVEQDYSESFKWYQLSTRQGNSVAQLYLGVLYTEGLGVEQNLELAVDWYRKS 458
Query: 164 AVLGDPAAQPA-------------NAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G+ AQ + EA K ++ + AQ +L + G GV+
Sbjct: 459 ADQGNSDAQCCLGDCYRLGDGVDQDYSEAFKWYQLSAEQDNSDAQLRLGVLYAEGLGVEQ 518
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL-- 268
NL AA WY ++A+ G A CY G+G+ + A KW + A+ G+ +AQ
Sbjct: 519 NLVLAADWYRKSADQGNSDAQCCLGDCYRLGDGVEQDYSAAFKWYQLPAEQGNPEAQFNL 578
Query: 269 ----EHGLGL 274
E GLG+
Sbjct: 579 GSMCEKGLGV 588
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G+ +K G VRKN A++ F A +G++ A G +R LG
Sbjct: 363 GQCYKDGIVVRKNPRLAVEWFRLAADQGNSDAQYCLG-------------DCFR----LG 405
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
Q + E+ K ++ G+ AQ L + G GV+ NL+ A WY ++A+ G
Sbjct: 406 QGVEQ--DYSESFKWYQLSTRQGNSVAQLYLGVLYTEGLGVEQNLELAVDWYRKSADQGN 463
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEG 278
A CY G+G+ + +A KW + +A+ + AQL G+ L+ EG
Sbjct: 464 SDAQCCLGDCYRLGDGVDQDYSEAFKWYQLSAEQDNSDAQLRLGV-LYAEG 513
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 183 LYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGE 242
+Y+ + G+ A+ + C G V N + A W+ AA+ G A Y C+ G+
Sbjct: 347 IYELAEEGYPEARCCIGQCYKDGIVVRKNPRLAVEWFRLAADQGNSDAQYCLGDCFRLGQ 406
Query: 243 GLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADH 300
G+ + ++ KW + + G+ AQL G+ L+TEG + LELA +AD
Sbjct: 407 GVEQDYSESFKWYQLSTRQGNSVAQLYLGV-LYTEG--LGVEQNLELAVDWYRKSADQ 461
>gi|423269905|ref|ZP_17248877.1| hypothetical protein HMPREF1079_01959 [Bacteroides fragilis
CL05T00C42]
gi|423272640|ref|ZP_17251587.1| hypothetical protein HMPREF1080_00240 [Bacteroides fragilis
CL05T12C13]
gi|392700751|gb|EIY93913.1| hypothetical protein HMPREF1079_01959 [Bacteroides fragilis
CL05T00C42]
gi|392708717|gb|EIZ01822.1| hypothetical protein HMPREF1080_00240 [Bacteroides fragilis
CL05T12C13]
Length = 832
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G V ++ +KA D K A + AM GL Y V+G+P
Sbjct: 472 YENGEVVEQSYEKAFDLLQKAAGQEYPYAMYRVGL--------------YLDRGVIGEP- 516
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ G A + L C G G + N +A W+ + AE R
Sbjct: 517 -RP---EEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEENPDKALEWFTKGAENNEPRC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y +G G+ + QA ++M +AA+ +G AQ + G F
Sbjct: 573 LTEMGLAYEYGSGIEENPHQAVEYMTKAAEQNYGYAQFKMGDYFF 617
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDK-ALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G F G G +K A++ + K A LAM+ G Y ++ DK E A S
Sbjct: 610 FKMGDYFFFGYGACPEDNKQAVEWYEKAVANDIPLAMLRMGEYYLYDYDKLNESEKAFSY 669
Query: 160 YRQAAV-------LGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+++AA LG N EA K A+ +G+V + Y+ LC + G GV
Sbjct: 670 FKKAAEAECYNEGLGICYEMGIGVEDNETEAFKYYTLAAGSGNVMSMYRTGLCYYNGVGV 729
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N EA RW+ AA V + Y +GEG +W+ +AA+ KAQ
Sbjct: 730 KQNYTEAYRWFNDAAGNDNVASYYYLGKMLMYGEGCVPDAEAGLQWLMKAAEHNSDKAQF 789
Query: 269 EHG 271
E G
Sbjct: 790 ELG 792
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
+ K A GS AMV+ +Y + E Y E+A LL +A+
Sbjct: 453 YEKAAELGSCFAMVELAFLY---ENGEVVEQSY----------------EKAFDLLQKAA 493
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
+ A Y++ L L RG + +EA WY +AAE G A++ CY G G +
Sbjct: 494 GQEYPYAMYRVGLYLDRGVIGEPRPEEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEEN 553
Query: 248 HRQARKWMKRAADCGHGKAQLEHGL 272
+A +W + A+ + E GL
Sbjct: 554 PDKALEWFTKGAENNEPRCLTEMGL 578
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 32/183 (17%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+D LN+ +F+ + +AA C +N+ L G ++ G GV N +A
Sbjct: 657 YDKLNESEKAFSYFK-KAAEAEC--YNEGL------------GICYEMGIGVEDNETEAF 701
Query: 126 DSFLKGAARGSTLAMVDAGLMY---------------WEMDK--KEAAISLYRQAAVLGD 168
+ A G+ ++M GL Y W D + S Y +L
Sbjct: 702 KYYTLAAGSGNVMSMYRTGLCYYNGVGVKQNYTEAYRWFNDAAGNDNVASYYYLGKMLMY 761
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+AE ++ L +A+ +AQ++L G GV+ N + A W+ +AAE G
Sbjct: 762 GEGCVPDAEAGLQWLMKAAEHNSDKAQFELGNAYLMGNGVEENDEIAMEWFEKAAENGNA 821
Query: 229 RAM 231
+A+
Sbjct: 822 KAL 824
>gi|436713011|ref|ZP_20518716.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434989479|gb|ELL81030.1| tetratricopeptide repeat protein, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
Length = 227
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD----KKEAAISLYRQA 163
G + +G + K+ + AL+ + + AA+G A G+M+ + + + A++ YR+A
Sbjct: 1 GVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKA 60
Query: 164 AVLGDPAAQP-------------ANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
A G PAAQ + +A+ +A+ +AQYQL + GRGV
Sbjct: 61 ARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPE 120
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFG-EGLPLSHRQARKW 254
N + A +WYL+AAE G+ A Y+ G +G+P ++QA W
Sbjct: 121 NSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIW 165
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 186 ASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLP 245
A+ G AQ + + +G GV + Q+A WY +AA G A + + +FG G+
Sbjct: 24 AAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVA 83
Query: 246 LSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
S RQA W ++AA KAQ + G+ T
Sbjct: 84 QSDRQAIAWYRKAAKQDFAKAQYQLGVAYST 114
>gi|336417389|ref|ZP_08597713.1| hypothetical protein HMPREF1017_04821 [Bacteroides ovatus
3_8_47FAA]
gi|335936135|gb|EGM98075.1| hypothetical protein HMPREF1017_04821 [Bacteroides ovatus
3_8_47FAA]
Length = 832
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV KN +K+ + K A +G AM GL Y + VLG+
Sbjct: 472 YENGDGVEKNYEKSFELISKAAEQGYPYAMFRVGL--------------YMEKGVLGE-- 515
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ A A + L C G G + N A W+ + AE R
Sbjct: 516 VKP---EEAFAWYTKAAEADDNDAIFALGRCYREGIGTEENWDRALEWFSKGAEKNEARC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ + Y G G+ + ++A ++M +AA+ +G AQ + G F
Sbjct: 573 LTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFKMGDYYF 617
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 88/246 (35%), Gaps = 58/246 (23%)
Query: 89 KSWNDALRPL------REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
++W+ AL EA L G +++G GV +N KA++ +K A + A
Sbjct: 552 ENWDRALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFK 611
Query: 143 AGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ------------------------- 172
G Y+ ++ + A+ Y +A P A
Sbjct: 612 MGDYYFFGCGPCLEDNKTAVEWYEKAVANEIPMAMLRVGEYYLYDYDSLNESEKAFAYFK 671
Query: 173 ----------------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
N EA K A+ G+ + Y+ LC + G GV
Sbjct: 672 KAAEYEWYSEGLGICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYYNGVGVKQ 731
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EA RW+ AA V A+Y +GEG A +W+ +AA+ + KAQ E
Sbjct: 732 NYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNNDKAQFEL 791
Query: 271 GLGLFT 276
G T
Sbjct: 792 GNAYLT 797
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV +N +A + A G+T +M GL Y+
Sbjct: 684 GICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYY------------------- 724
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N EA + A+ +V A Y L + G G + + + A +W L+AAE
Sbjct: 725 NGVGVKQNYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNN 784
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A + Y G G+ + A +W ++AA+ G+ KA
Sbjct: 785 DKAQFELGNAYLTGNGVEENDEIAMEWFEKAAENGNEKA 823
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
+G K+ K+ + + K A G+ A+V+ +Y D E
Sbjct: 438 NGYSGVKDPVKSREYYEKAAELGACFALVELAFLYENGDGVEK----------------- 480
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N E++ +L+ +A+ G+ A +++ L + +G + +EA WY +AAE A++
Sbjct: 481 --NYEKSFELISKAAEQGYPYAMFRVGLYMEKGVLGEVKPEEAFAWYTKAAEADDNDAIF 538
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
CY G G + +A +W + A+ + E G+ G E KAV Y+
Sbjct: 539 ALGRCYREGIGTEENWDRALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYM 597
>gi|423248196|ref|ZP_17229212.1| hypothetical protein HMPREF1066_00222 [Bacteroides fragilis
CL03T00C08]
gi|423253145|ref|ZP_17234076.1| hypothetical protein HMPREF1067_00720 [Bacteroides fragilis
CL03T12C07]
gi|423259413|ref|ZP_17240336.1| hypothetical protein HMPREF1055_02613 [Bacteroides fragilis
CL07T00C01]
gi|423263613|ref|ZP_17242616.1| hypothetical protein HMPREF1056_00303 [Bacteroides fragilis
CL07T12C05]
gi|387776993|gb|EIK39093.1| hypothetical protein HMPREF1055_02613 [Bacteroides fragilis
CL07T00C01]
gi|392657045|gb|EIY50682.1| hypothetical protein HMPREF1067_00720 [Bacteroides fragilis
CL03T12C07]
gi|392660303|gb|EIY53917.1| hypothetical protein HMPREF1066_00222 [Bacteroides fragilis
CL03T00C08]
gi|392707035|gb|EIZ00155.1| hypothetical protein HMPREF1056_00303 [Bacteroides fragilis
CL07T12C05]
Length = 832
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G V ++ +KA D K A + AM GL Y V+G+P
Sbjct: 472 YENGEVVEQSYEKAFDLLQKAAGQEYPYAMYRVGL--------------YLDRGVIGEP- 516
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ G A + L C G G + N +A W+ + AE R
Sbjct: 517 -RP---EEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEENPDKALEWFTKGAENNEPRC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y +G G+ + QA ++M +AA+ +G AQ + G F
Sbjct: 573 LTEMGLAYEYGSGIEENPHQAVEYMTKAAEQNYGYAQFKMGDYFF 617
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDK-ALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G F G G +K A++ + K A LAM+ G Y ++ DK E A S
Sbjct: 610 FKMGDYFFFGYGACPEDNKQAVEWYEKAVANDIPLAMLRMGEYYLYDYDKLNESEKAFSY 669
Query: 160 YRQAAV-------LGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+++AA LG N EA K A+ +G+V + Y+ LC + G GV
Sbjct: 670 FKKAAEAECYNEGLGICYEMGIGVEDNETEAFKYYTLAAGSGNVMSMYRTGLCYYNGVGV 729
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N EA RW+ AA V + Y +GEG +W+ +AA+ KAQ
Sbjct: 730 KQNYTEAYRWFNDAAGNDNVASYYYLGKMLMYGEGCVPDAEAGLQWLMKAAEHNSDKAQF 789
Query: 269 EHG 271
E G
Sbjct: 790 ELG 792
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
+ K A GS AMV+ +Y + E Y E+A LL +A+
Sbjct: 453 YEKAAELGSCFAMVELAFLY---ENGEVVEQSY----------------EKAFDLLQKAA 493
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
+ A Y++ L L RG + +EA WY +AAE G A++ CY G G +
Sbjct: 494 GQEYPYAMYRVGLYLDRGVIGEPRPEEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEEN 553
Query: 248 HRQARKWMKRAADCGHGKAQLEHGL 272
+A +W + A+ + E GL
Sbjct: 554 PDKALEWFTKGAENNEPRCLTEMGL 578
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 32/183 (17%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+D LN+ +F+ + +AA C +N+ L G ++ G GV N +A
Sbjct: 657 YDKLNESEKAFSYFK-KAAEAEC--YNEGL------------GICYEMGIGVEDNETEAF 701
Query: 126 DSFLKGAARGSTLAMVDAGLMY---------------WEMDK--KEAAISLYRQAAVLGD 168
+ A G+ ++M GL Y W D + S Y +L
Sbjct: 702 KYYTLAAGSGNVMSMYRTGLCYYNGVGVKQNYTEAYRWFNDAAGNDNVASYYYLGKMLMY 761
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+AE ++ L +A+ +AQ++L G GV+ N + A W+ +AAE G
Sbjct: 762 GEGCVPDAEAGLQWLMKAAEHNSDKAQFELGNAYLMGNGVEENDEIAMEWFEKAAENGNA 821
Query: 229 RAM 231
+A+
Sbjct: 822 KAL 824
>gi|281421328|ref|ZP_06252327.1| Sel1 protein [Prevotella copri DSM 18205]
gi|281404400|gb|EFB35080.1| Sel1 protein [Prevotella copri DSM 18205]
Length = 244
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 149 EMDKKEAAISLYRQAAVLGD---------PAAQPANAEE----AVKLLYQASIAGHVRAQ 195
EM K+ + YRQ A+ GD AQ E A + +A+ G + A
Sbjct: 30 EMKKERETANKYRQQALEGDLMAMNNMGVCYAQGIGVVEDHVMAFQWYMKAAELGDIYAC 89
Query: 196 YQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 255
Y +A C ++G GV+ + + A WYL AAE G V++ N + + G+G H +A +W
Sbjct: 90 YNVAECYYQGDGVEQDFERALHWYLIAAEKGDVQSQVNAANAFYLGQGTEEDHVKAHQWW 149
Query: 256 KRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYLELATRAGETAA 298
+AA GH ++Q G G E + A + E+A + G+ A
Sbjct: 150 LKAAQRGHLQSQKNVGANYRNGDGVEKDDSWAAFWYEMAGQQGDPQA 196
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 102 MVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA----AI 157
M + G + G GV ++ A ++K A G A + Y++ D E A+
Sbjct: 51 MAMNNMGVCYAQGIGVVEDHVMAFQWYMKAAELGDIYACYNVAECYYQGDGVEQDFERAL 110
Query: 158 SLYRQAAVLGDPAAQ--PANA--------EEAVK---LLYQASIAGHVRAQYQLALCLHR 204
Y AA GD +Q ANA E+ VK +A+ GH+++Q +
Sbjct: 111 HWYLIAAEKGDVQSQVNAANAFYLGQGTEEDHVKAHQWWLKAAQRGHLQSQKNVGANYRN 170
Query: 205 GRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRA 258
G GV+ + AA WY A + G +A ++T Y G G+ R+ KW+ RA
Sbjct: 171 GDGVEKDDSWAAFWYEMAGQQGDPQAQFSTGWFYMTGTGVKQDKRKGLKWIHRA 224
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
Query: 126 DSFLKGAARGSTLAMVDAGLMYWE----MDKKEAAISLYRQAAVLGDPAA---------- 171
+ + + A G +AM + G+ Y + ++ A Y +AA LGD A
Sbjct: 39 NKYRQQALEGDLMAMNNMGVCYAQGIGVVEDHVMAFQWYMKAAELGDIYACYNVAECYYQ 98
Query: 172 ---QPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+ E A+ A+ G V++Q A + G+G + + +A +W+L+AA+ G++
Sbjct: 99 GDGVEQDFERALHWYLIAAEKGDVQSQVNAANAFYLGQGTEEDHVKAHQWWLKAAQRGHL 158
Query: 229 RAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 276
++ N Y G+G+ A W + A G +AQ G T
Sbjct: 159 QSQKNVGANYRNGDGVEKDDSWAAFWYEMAGQQGDPQAQFSTGWFYMT 206
>gi|160883940|ref|ZP_02064943.1| hypothetical protein BACOVA_01914 [Bacteroides ovatus ATCC 8483]
gi|423290635|ref|ZP_17269484.1| hypothetical protein HMPREF1069_04527 [Bacteroides ovatus
CL02T12C04]
gi|156110670|gb|EDO12415.1| Sel1 repeat protein [Bacteroides ovatus ATCC 8483]
gi|392665288|gb|EIY58816.1| hypothetical protein HMPREF1069_04527 [Bacteroides ovatus
CL02T12C04]
Length = 832
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G GV KN +K+ + K A +G AM GL Y + VLG+
Sbjct: 472 YENGDGVEKNYEKSFELISKAAEQGYPYAMFRVGL--------------YMEKGVLGE-- 515
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ A A + L C G G + N A W+ + AE R
Sbjct: 516 VKP---EEAFAWYTKAAEADDNDAIFALGRCYREGIGTEENWDRALEWFSKGAEKNEARC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ + Y G G+ + ++A ++M +AA+ +G AQ + G F
Sbjct: 573 LTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFKMGDYYF 617
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 88/246 (35%), Gaps = 58/246 (23%)
Query: 89 KSWNDALRPL------REAMVLLRWGKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVD 142
++W+ AL EA L G +++G GV +N KA++ +K A + A
Sbjct: 552 ENWDRALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYMMKAAEQDYGYAQFK 611
Query: 143 AGLMYWE-----MDKKEAAISLYRQAAVLGDPAAQ------------------------- 172
G Y+ ++ + A+ Y +A P A
Sbjct: 612 MGDYYFFGCGPCLEDNKTAVEWYEKAVANEIPMAMLRVGEYYLYDYDSLNESEKAFAYFK 671
Query: 173 ----------------------PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDF 210
N EA K A+ G+ + Y+ LC + G GV
Sbjct: 672 KAAEYEWYSEGLGICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYYNGVGVKQ 731
Query: 211 NLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEH 270
N EA RW+ AA V A+Y +GEG A +W+ +AA+ + KAQ E
Sbjct: 732 NYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNNDKAQFEL 791
Query: 271 GLGLFT 276
G T
Sbjct: 792 GNAYLT 797
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 108 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLG 167
G ++ G GV +N +A + A G+T +M GL Y+
Sbjct: 684 GICYEMGIGVEENETEAFKYYTLAADNGNTTSMYRTGLCYY------------------- 724
Query: 168 DPAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGY 227
+ N EA + A+ +V A Y L + G G + + + A +W L+AAE
Sbjct: 725 NGVGVKQNYAEAYRWFTDAAGNENVAAIYYLGKMMMYGEGCNPDPEAAVQWLLKAAEKNN 784
Query: 228 VRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 266
+A + Y G G+ + A +W ++AA+ G+ KA
Sbjct: 785 DKAQFELGNAYLTGNGVEENDEIAMEWFEKAAENGNEKA 823
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 113 HGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQ 172
+G K+ K+ + + K A G+ A+V+ +Y D E
Sbjct: 438 NGYSGVKDPVKSREYYEKAAELGACFALVELAFLYENGDGVEK----------------- 480
Query: 173 PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMY 232
N E++ +L+ +A+ G+ A +++ L + +G + +EA WY +AAE A++
Sbjct: 481 --NYEKSFELISKAAEQGYPYAMFRVGLYMEKGVLGEVKPEEAFAWYTKAAEADDNDAIF 538
Query: 233 NTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGL----GLFTEGEMMKAVVYL 287
CY G G + +A +W + A+ + E G+ G E KAV Y+
Sbjct: 539 ALGRCYREGIGTEENWDRALEWFSKGAEKNEARCLTELGMAYENGNGVEENPQKAVEYM 597
>gi|60679788|ref|YP_209932.1| hypothetical protein BF0193 [Bacteroides fragilis NCTC 9343]
gi|336407722|ref|ZP_08588218.1| hypothetical protein HMPREF1018_00233 [Bacteroides sp. 2_1_56FAA]
gi|60491222|emb|CAH05970.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
gi|335944801|gb|EGN06618.1| hypothetical protein HMPREF1018_00233 [Bacteroides sp. 2_1_56FAA]
Length = 832
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 111 FKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPA 170
+++G V ++ +KA D K A + AM GL Y V+G+P
Sbjct: 472 YENGEVVEQSYEKAFDLLQKAAGQEYPYAMYRVGL--------------YLDRGVIGEP- 516
Query: 171 AQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRA 230
+P EEA +A+ G A + L C G G + N +A W+ + AE R
Sbjct: 517 -RP---EEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEENPDKALEWFTKGAENNEPRC 572
Query: 231 MYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLF 275
+ L Y +G G+ + QA ++M +AA+ +G AQ + G F
Sbjct: 573 LTEMGLAYEYGSGIEENPHQAVEYMTKAAEQNYGYAQFKMGDYFF 617
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 105 LRWGKRFKHGRGVRKNLDK-ALDSFLKGAARGSTLAMVDAGLMY-WEMDK---KEAAISL 159
+ G F G G +K A++ + K A LAM+ G Y ++ DK E A S
Sbjct: 610 FKMGDYFFFGYGACPEDNKQAVEWYEKAVANDIPLAMLRMGEYYLYDYDKLNESEKAFSY 669
Query: 160 YRQAAV-------LGD----PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGV 208
+++AA LG N EA K A+ +G+V + Y+ LC + G GV
Sbjct: 670 FKKAAEAECYNEGLGICYEMGIGVEDNETEAFKYYTLAAGSGNVMSMYRTGLCYYNGVGV 729
Query: 209 DFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 268
N EA RW+ AA V + Y +GEG +W+ +AA+ KAQ
Sbjct: 730 KQNYTEAYRWFNDAAGNDNVASYYYLGKMLMYGEGCVPDAEAGLQWLMKAAEHNSDKAQF 789
Query: 269 EHG 271
E G
Sbjct: 790 ELG 792
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 128 FLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAAQPANAEEAVKLLYQAS 187
+ K A GS AMV+ +Y + E Y E+A LL +A+
Sbjct: 453 YEKAAELGSCFAMVELAFLY---ENGEVVEQSY----------------EKAFDLLQKAA 493
Query: 188 IAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLS 247
+ A Y++ L L RG + +EA WY +AAE G A++ CY G G +
Sbjct: 494 GQEYPYAMYRVGLYLDRGVIGEPRPEEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEEN 553
Query: 248 HRQARKWMKRAADCGHGKAQLEHGL 272
+A +W + A+ + E GL
Sbjct: 554 PDKALEWFTKGAENNEPRCLTEMGL 578
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 32/183 (17%)
Query: 66 FDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRGVRKNLDKAL 125
+D LN+ +F+ + +AA C +N+ L G ++ G GV N +A
Sbjct: 657 YDKLNESEKAFSYFK-KAAEAEC--YNEGL------------GICYEMGIGVEDNETEAF 701
Query: 126 DSFLKGAARGSTLAMVDAGLMY---------------WEMDK--KEAAISLYRQAAVLGD 168
+ A G+ ++M GL Y W D + S Y +L
Sbjct: 702 KYYTLAAGSGNVMSMYRTGLCYYNGVGVKQNYTEAYRWFNDAAGNDNVASYYYLGKMLMY 761
Query: 169 PAAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYV 228
+AE ++ L +A+ +AQ++L G GV+ N + A W+ +AAE G
Sbjct: 762 GEGCVPDAEAGLQWLMKAAEHNSDKAQFELGNAYLMGNGVEENDEIAMEWFEKAAENGNA 821
Query: 229 RAM 231
+A+
Sbjct: 822 KAL 824
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.132 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,834,381,629
Number of Sequences: 23463169
Number of extensions: 185176442
Number of successful extensions: 491877
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4993
Number of HSP's successfully gapped in prelim test: 1555
Number of HSP's that attempted gapping in prelim test: 450246
Number of HSP's gapped (non-prelim): 26292
length of query: 331
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 188
effective length of database: 9,003,962,200
effective search space: 1692744893600
effective search space used: 1692744893600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)