BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020093
(331 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 212/265 (80%), Gaps = 2/265 (0%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
++ DIIYE GIAKITINRP+ NAFRP TV E+I AF ARDDS++GVIILTG G
Sbjct: 10 DYEDIIYETY--NGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGG 67
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
+AFCSGGDQ +R GY + RLNVLDLQ IR +PKPVIAMVAGYA+GGGHVLH+V
Sbjct: 68 KAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMVAGYAIGGGHVLHVV 127
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGL 246
CDLTIAADNAIFGQTGPKVGSFD GYG+ ++R+VG KKARE+W+L R YTA+EA +MGL
Sbjct: 128 CDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQYTAQEALEMGL 187
Query: 247 VNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLIFYGT 306
VN VVPLE+LE+ET+KW++EIL SPTAIR LK+A NA DG AG+Q L GDATL+FY T
Sbjct: 188 VNKVVPLEQLEEETVKWAQEILEKSPTAIRFLKAAFNADSDGLAGIQQLAGDATLLFYTT 247
Query: 307 EEGSEGKTAFVERRRPDFLKFPRRP 331
EE EG AF E+R+PDF +FPR P
Sbjct: 248 EEAKEGMRAFKEKRKPDFSQFPRFP 272
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/287 (63%), Positives = 218/287 (75%), Gaps = 11/287 (3%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E F DI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D ++GVIILTG G +AFCSGGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPK 224
PKPV+AMVAGY++GGGHVLHM+CDLTIAADNAIFGQTGPKVGSFD G+G+S M+R+VG K
Sbjct: 119 PKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQK 178
Query: 225 KAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNA 284
KARE+WFL R Y A++A MGLVNTVVPL LE+ET++W RE+L+NSP A+R LK+ALNA
Sbjct: 179 KAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNA 238
Query: 285 VDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPRRP 331
DG AGLQ L G+AT++FY TEEG EG+ AF ++R+PDF KF R P
Sbjct: 239 DCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/287 (63%), Positives = 218/287 (75%), Gaps = 11/287 (3%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E F DI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 13 LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 62
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D ++GVIILTG G +AFCSGGDQ +R GY D LNVLD Q QIR
Sbjct: 63 ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 122
Query: 165 PKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPK 224
PKPV+AMVAGY++GGGHVLHM+CDLTIAADNAIFGQTGPKVGSFD G+G+S M+R+VG K
Sbjct: 123 PKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQK 182
Query: 225 KAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNA 284
KARE+WFL R Y A++A MGLVNTVVPL LE+ET++W RE+L+NSP A+R LK+ALNA
Sbjct: 183 KAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNA 242
Query: 285 VDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPRRP 331
DG AGLQ L G+AT++FY TEEG EG+ AF ++R+PDF KF R P
Sbjct: 243 DCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 289
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 357 bits (915), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 176/280 (62%), Positives = 217/280 (77%), Gaps = 12/280 (4%)
Query: 57 WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
W IA + DI+Y KA GIAKI INRP +RNAFRP TV EL AF +AR+D+ +
Sbjct: 3 WHIA-----KHYDDILYYKA--GGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRI 55
Query: 117 GVIILTGKGTE-----AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAM 171
GV++LTG G AFCSGGDQ++R GY D + RLNVLDLQ IR +PK VIA+
Sbjct: 56 GVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIAL 115
Query: 172 VAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWF 231
VAGYA+GGGHVLH+VCDLTIAADNAIFGQTGPKVGSFD G+GSS ++R+VG KKARE+W+
Sbjct: 116 VAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWY 175
Query: 232 LARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAG 291
L R Y+A+EAE+MG+VNTVVP+++LE+E I+W++EIL SP AIR LK+A NA DG AG
Sbjct: 176 LCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADCDGQAG 235
Query: 292 LQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPRRP 331
LQ L G+ATL++Y TEEGSEGK AF+E+R PDF ++P P
Sbjct: 236 LQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFSQYPWLP 275
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 352 bits (904), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 212/269 (78%), Gaps = 2/269 (0%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV GYAVGGG+V
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNV 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAE 242
L++VCDLTIAADNAIFGQTGPKVGSFDAGYGS ++R+VG KKARE+W+L R Y A+EA
Sbjct: 125 LNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEAL 184
Query: 243 KMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLI 302
MGLVNTVVPLEK+E ET++W +EI+++SPTA+R LK+A+NA DG AGLQ + GDATL+
Sbjct: 185 DMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLL 244
Query: 303 FYGTEEGSEGKTAFVERRRPDFLKFPRRP 331
+Y T+E EG+ AF E+R PDF +FP+ P
Sbjct: 245 YYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 351 bits (901), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/298 (60%), Positives = 216/298 (72%), Gaps = 11/298 (3%)
Query: 35 NNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNA 94
+NA + ++ V HD C E +TDI YEK+ +GIAKITINRP RNA
Sbjct: 1 SNAXIYPDETXLYAPVEWHD------CSEG---YTDIRYEKST-DGIAKITINRPQVRNA 50
Query: 95 FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLN 153
FRP TVKE I+A DAR D +VGVIILTG+G +AFC+GGDQ +R GY D LN
Sbjct: 51 FRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLN 110
Query: 154 VLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYG 213
VLD Q QIR PKPV+A VAGY++GGGHVLH CDLTIAA+NAIFGQTGPKVGSFD G+G
Sbjct: 111 VLDFQRQIRTCPKPVVAXVAGYSIGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWG 170
Query: 214 SSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPT 273
+S +R+VG KKARE+WFL R Y A++A GLVNTVVPL LE+ET++W RE L+NSP
Sbjct: 171 ASYXARIVGQKKAREIWFLCRQYDAQQALDXGLVNTVVPLADLEKETVRWCREXLQNSPX 230
Query: 274 AIRVLKSALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPRRP 331
A+R LK+ALNA DG AGLQ L G+AT +FY TEEG EG+ AF ++R+PDF KF R P
Sbjct: 231 ALRCLKAALNADCDGQAGLQELAGNATXLFYXTEEGQEGRNAFNQKRQPDFSKFKRNP 288
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 254 bits (649), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 180/290 (62%), Gaps = 19/290 (6%)
Query: 57 WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
WR+ + + TDI Y + V + ++ NRP+ RNAFRPHTV EL R + AR V
Sbjct: 25 WRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDV 82
Query: 117 GVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQ 160
GV++LTG G AFCSGGDQ +R R GY D GRL++L++Q
Sbjct: 83 GVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRL 142
Query: 161 IRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA-DNAIFGQTGPKVGSFDAGYGSSIMSR 219
IR +PK VI +V G+A GGGH LH+VCDLT+A+ + A F QT VGSFD GYGS+ ++R
Sbjct: 143 IRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLAR 202
Query: 220 LVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLK 279
VG K ARE++FL R YTAE+ +MG VN V +LE ++W+ EI SP A R+LK
Sbjct: 203 QVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLK 262
Query: 280 SALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPR 329
A N +DDG G Q G+AT + Y T+E EG+ AF+++R PD+ FPR
Sbjct: 263 FAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPR 312
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 254 bits (649), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 180/290 (62%), Gaps = 19/290 (6%)
Query: 57 WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
WR+ + + TDI Y + V + ++ NRP+ RNAFRPHTV EL R + AR V
Sbjct: 50 WRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDV 107
Query: 117 GVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQ 160
GV++LTG G AFCSGGDQ +R R GY D GRL++L++Q
Sbjct: 108 GVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRL 167
Query: 161 IRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA-DNAIFGQTGPKVGSFDAGYGSSIMSR 219
IR +PK VI +V G+A GGGH LH+VCDLT+A+ + A F QT VGSFD GYGS+ ++R
Sbjct: 168 IRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLAR 227
Query: 220 LVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLK 279
VG K ARE++FL R YTAE+ +MG VN V +LE ++W+ EI SP A R+LK
Sbjct: 228 QVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLK 287
Query: 280 SALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPR 329
A N +DDG G Q G+AT + Y T+E EG+ AF+++R PD+ FPR
Sbjct: 288 FAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPR 337
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 254 bits (648), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 180/290 (62%), Gaps = 19/290 (6%)
Query: 57 WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
WR+ + + TDI Y + V + ++ NRP+ RNAFRPHTV EL R + AR V
Sbjct: 45 WRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDV 102
Query: 117 GVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQ 160
GV++LTG G AFCSGGDQ +R R GY D GRL++L++Q
Sbjct: 103 GVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRL 162
Query: 161 IRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA-DNAIFGQTGPKVGSFDAGYGSSIMSR 219
IR +PK VI +V G+A GGGH LH+VCDLT+A+ + A F QT VGSFD GYGS+ ++R
Sbjct: 163 IRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLAR 222
Query: 220 LVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLK 279
VG K ARE++FL R YTAE+ +MG VN V +LE ++W+ EI SP A R+LK
Sbjct: 223 QVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLK 282
Query: 280 SALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERRRPDFLKFPR 329
A N +DDG G Q G+AT + Y T+E EG+ AF+++R PD+ FPR
Sbjct: 283 FAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPR 332
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 137/263 (52%), Gaps = 8/263 (3%)
Query: 64 SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
S T +T I + V G+ I ++RPD NA E++ A D D +G I++TG
Sbjct: 4 SMTTYTTIATSRPVA-GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTG 62
Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVL 183
AF +G D A L+ D Q+R KP++A VAGYA+GGG L
Sbjct: 63 S-ERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVR---KPIVAAVAGYALGGGCEL 118
Query: 184 HMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEK 243
M+CDL IAAD A FGQ +G G+ ++R VG KA ++ R TAEEAE+
Sbjct: 119 AMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAER 178
Query: 244 MGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDG--HAGLQTLGGDATL 301
+GLV+ +VP L E + ++ I R S A R +K A+N + AG++ DA
Sbjct: 179 VGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLSAGMR-YERDAFY 237
Query: 302 IFYGTEEGSEGKTAFVERRRPDF 324
+ T + +EG TAF+E+R P+F
Sbjct: 238 AMFDTHDQTEGMTAFLEKRTPEF 260
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 16/267 (5%)
Query: 65 GTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
G F II EK + I +NRP NA ++EL +A +D +VG I+LTG
Sbjct: 1 GANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG 60
Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVL 183
G +AF +G D + D + L+ D I R+ KPVIA V GYA+GGG L
Sbjct: 61 -GEKAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVNGYALGGGCEL 116
Query: 184 HMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEK 243
M+CD+ A + A FGQ +G+ G+ ++R VG A EM +A++A++
Sbjct: 117 AMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQ 176
Query: 244 MGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL-- 301
GLV+ + P+E L +E I+ + +I NS + + K ++NA + TL L
Sbjct: 177 AGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFE-----MTLTEGNKLEK 231
Query: 302 -IFY---GTEEGSEGKTAFVERRRPDF 324
+FY T++ EG +AFVE+R+ +F
Sbjct: 232 KLFYSTFATDDRREGMSAFVEKRKANF 258
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 134/268 (50%), Gaps = 27/268 (10%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ I+ E+ GI IT+NRP NA + E+ A + DD +G II+TG +
Sbjct: 4 YETILVERDQRVGI--ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-K 60
Query: 128 AFCSGGDQALRTRDGYAD------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
AF +G D +AD + +G+L + P IA VAGYA+GGG
Sbjct: 61 AFAAGADIKEMADLTFADAFTADFFATWGKLAAVR---------TPTIAAVAGYALGGGC 111
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
L M+CD+ IAAD A FGQ K+G GS ++R +G KA ++ R A EA
Sbjct: 112 ELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEA 171
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALN-----AVDDGHAGLQTLG 296
E+ GLV+ VVP + L E + I + S +A R+ K A+N ++ +G + L
Sbjct: 172 ERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLF 231
Query: 297 GDATLIFYGTEEGSEGKTAFVERRRPDF 324
A + TE+ SEG AF+E+R P F
Sbjct: 232 HSA----FATEDQSEGMAAFIEKRAPQF 255
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 134/268 (50%), Gaps = 27/268 (10%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ I+ E+ GI IT+NRP NA + E+ A + DD +G II+TG +
Sbjct: 3 YETILVERDQRVGI--ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-K 59
Query: 128 AFCSGGDQALRTRDGYAD------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
AF +G D +AD + +G+L + P IA VAGYA+GGG
Sbjct: 60 AFAAGADIKEMADLTFADAFTADFFATWGKLAAVR---------TPTIAAVAGYALGGGC 110
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
L M+CD+ IAAD A FGQ K+G GS ++R +G KA ++ R A EA
Sbjct: 111 ELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEA 170
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALN-----AVDDGHAGLQTLG 296
E+ GLV+ VVP + L E + I + S +A R+ K A+N ++ +G + L
Sbjct: 171 ERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLF 230
Query: 297 GDATLIFYGTEEGSEGKTAFVERRRPDF 324
A + TE+ SEG AF+E+R P F
Sbjct: 231 HSA----FATEDQSEGMAAFIEKRAPQF 254
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 134/268 (50%), Gaps = 27/268 (10%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ I+ E+ GI IT+NRP NA + E+ A + DD +G II+TG +
Sbjct: 24 YETILVERDQRVGI--ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-K 80
Query: 128 AFCSGGDQALRTRDGYAD------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
AF +G D +AD + +G+L + P IA VAGYA+GGG
Sbjct: 81 AFAAGADIKEMADLTFADAFTADFFATWGKLAAVR---------TPTIAAVAGYALGGGC 131
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
L M+CD+ IAAD A FGQ K+G GS ++R +G KA ++ R A EA
Sbjct: 132 ELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEA 191
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALN-----AVDDGHAGLQTLG 296
E+ GLV+ VVP + L E + I + S +A R+ K A+N ++ +G + L
Sbjct: 192 ERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLF 251
Query: 297 GDATLIFYGTEEGSEGKTAFVERRRPDF 324
A + TE+ SEG AF+E+R P F
Sbjct: 252 HSA----FATEDQSEGMAAFIEKRAPQF 275
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 138/272 (50%), Gaps = 24/272 (8%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA + EL +A +D +VG I+LT
Sbjct: 25 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLT 84
Query: 123 GKGTEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVG 178
G G +AF +G D Q L +D Y+ L + ++ KPVIA V GYA G
Sbjct: 85 G-GDKAFAAGADIKEMQNLSFQDCYSS-------KFLKHWDHLTQVKKPVIAAVNGYAFG 136
Query: 179 GGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTA 238
GG L M+CD+ A + A F Q +G+ G+ ++R VG A EM +A
Sbjct: 137 GGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISA 196
Query: 239 EEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGD 298
++A++ GLV+ + P+E L +E I+ + +I NS + + K ++NA + TL
Sbjct: 197 QDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFE-----MTLTEG 251
Query: 299 ATL---IFY---GTEEGSEGKTAFVERRRPDF 324
+ L +FY T++ EG TAFVE+R+ +F
Sbjct: 252 SKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 283
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 138/247 (55%), Gaps = 6/247 (2%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+ KI++NR + N+ ++EL ++++ V+ILTG G +AFC+G D L+ R
Sbjct: 19 VVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGAD--LKER 76
Query: 141 DGYADYENFGRLNVLDLQVQ-IRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFG 199
G + + ++ + + + +LP+PVIA + G A+GGG L + CD IAA++A G
Sbjct: 77 AGXNEEQVRHAVSXIRTTXEXVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLG 136
Query: 200 QTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQE 259
T + G+ + RL+G +A+E+ + R +A+EA++ GLV VVP+ LE++
Sbjct: 137 LTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEK 196
Query: 260 TIKWSREILRNSPTAIRVLKSAL-NAVD-DGHAGLQTLGGDATLIFYGTEEGSEGKTAFV 317
I+ + +I N P A+R+ K A+ N + D H GLQ + + T++ EG AF
Sbjct: 197 AIEIAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQXEKQAYEGVIH-TKDRLEGLQAFK 255
Query: 318 ERRRPDF 324
E+R P +
Sbjct: 256 EKRTPXY 262
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 137/264 (51%), Gaps = 16/264 (6%)
Query: 68 FTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
F II EK + I +NRP NA ++EL +A +D +VG I+LTG G
Sbjct: 3 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG-GE 61
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
+AF +G D + D + L+ D I R+ KPVIA V GYA+GGG L M+
Sbjct: 62 KAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVNGYALGGGCELAMM 118
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGL 246
CD+ A + A FGQ +G+ G+ ++R VG A EM +A++A++ GL
Sbjct: 119 CDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL 178
Query: 247 VNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL---IF 303
V+ + P+E L +E I+ + +I NS + + K ++NA + TL L +F
Sbjct: 179 VSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFE-----MTLTEGNKLEKKLF 233
Query: 304 Y---GTEEGSEGKTAFVERRRPDF 324
Y T++ EG +AFVE+R+ +F
Sbjct: 234 YSTFATDDRREGMSAFVEKRKANF 257
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 137/264 (51%), Gaps = 16/264 (6%)
Query: 68 FTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
F II EK + I +NRP NA ++EL +A +D +VG I+LTG G
Sbjct: 1 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG-GE 59
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
+AF +G D + D + L+ D I R+ KPVIA V GYA+GGG L M+
Sbjct: 60 KAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVNGYALGGGCELAMM 116
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGL 246
CD+ A + A FGQ +G+ G+ ++R VG A EM +A++A++ GL
Sbjct: 117 CDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL 176
Query: 247 VNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL---IF 303
V+ + P+E L +E I+ + +I NS + + K ++NA + TL L +F
Sbjct: 177 VSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFE-----MTLTEGNKLEKKLF 231
Query: 304 Y---GTEEGSEGKTAFVERRRPDF 324
Y T++ EG +AFVE+R+ +F
Sbjct: 232 YSTFATDDRREGMSAFVEKRKANF 255
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 11/262 (4%)
Query: 66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
+EF I + GI I + RPD NA V E++ A + V VI+LTG+G
Sbjct: 2 SEFVSIAARQEGAVGI--IELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRG 59
Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHM 185
AF +G D +D E + D ++ + P+IA V G A+GGG L +
Sbjct: 60 -RAFAAGADIQEMAKDDPIRLEWLNQFADWD---RLSIVKTPMIAAVNGLALGGGFELAL 115
Query: 186 VCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKARE-MWFLARFYTAEEAEKM 244
CDL +A+ A FG +G G+ +++L+GPK+A E +W AR +A+EAE++
Sbjct: 116 SCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARM-SAKEAEQL 174
Query: 245 GLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDG--HAGLQTLGGDATLI 302
G+VN VV E L +ET++ + + P A+R++K A+ D + G+Q + L+
Sbjct: 175 GIVNRVVSPELLMEETMRLAGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFERKNFYLL 234
Query: 303 FYGTEEGSEGKTAFVERRRPDF 324
F +E+ EG AF+E+R+P F
Sbjct: 235 F-ASEDQKEGMAAFLEKRKPRF 255
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 13/251 (5%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+A + +N P+RRN P L++A +D D V ++LTG+G +AF +G D A R
Sbjct: 9 VAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRG-KAFSAGADLAFLER 67
Query: 141 DGYADYENFGR--LNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
E R L++ L ++ PKP +A V G AV GG L + CDL + + A
Sbjct: 68 VTELGAEENYRHSLSLXRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVXDEEARL 127
Query: 199 GQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQ 258
G T K+G F A S I+ R VG K A+++ R A EA+ +GLVN + P K +
Sbjct: 128 GYTEVKIG-FVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALE 186
Query: 259 ETIKWSREILRNSPTAIRVLKS-----ALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGK 313
E + E+ +N+PT++R+ K ++DG L A T + +EG
Sbjct: 187 EAKALAEEVAKNAPTSLRLTKELLLALPGXGLEDGF----RLAALANAWVRETGDLAEGI 242
Query: 314 TAFVERRRPDF 324
AF E+R P F
Sbjct: 243 RAFFEKRPPRF 253
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 119/226 (52%), Gaps = 13/226 (5%)
Query: 69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA 128
T++ + V + IA IT+NRP+ NA P + EL A+ A +D+ V VI+L G
Sbjct: 18 TEMYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKH- 76
Query: 129 FCSGGDQALRTRDGYAD-------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
F +G D LR D Y + R L+ ++ R +PKP IA V G + GG
Sbjct: 77 FSAGHD--LRGGGPVPDKLTLEFIYAHESR-RYLEYSLRWRNVPKPSIAAVQGRCISGGL 133
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
+L CDL IAA++A+F + P V G + +GP+KA+E+ F R TAEE
Sbjct: 134 LLCWPCDLIIAAEDALF--SDPVVLMDIGGVEYHGHTWELGPRKAKEILFTGRAMTAEEV 191
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDD 287
+ G+VN VVP ++L+ ET + EI + P A+R K A+N D
Sbjct: 192 AQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVNQTLD 237
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 15/219 (6%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
V + IA IT+NRP+ NA P + EL A+ A +D+ V VIIL G F +G D
Sbjct: 29 VADSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKH-FSAGHD-- 85
Query: 137 LRTRDGYADYENFGRLNV--------LDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCD 188
R G E + LD ++ R +PKP IA V G + GG +L CD
Sbjct: 86 --LRGGGEVPEKISLEFIIQHEARRYLDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPCD 143
Query: 189 LTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVN 248
L +A+D+A+F +G Y +GP+KA+E+ F R TAEEAE+ G+VN
Sbjct: 144 LILASDDALFSDPVALMGIGGVEYHGHTWE--LGPRKAKEILFTGRALTAEEAERTGMVN 201
Query: 249 TVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDD 287
VV ++L+ +T + + +I P A+R K A+N D
Sbjct: 202 RVVARDELDAQTRELAEQIATMPPFALRQAKRAVNQTLD 240
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 15/252 (5%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALR 138
G+ +T+NRP NA + L AF +D SV ++L G +AFC+G D + +R
Sbjct: 35 GVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASG-KAFCAGHDLKEMR 93
Query: 139 TRDGYADYEN-FGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
YE F R D+ + I+RLP PVIA V G A G L +CDL +A +A
Sbjct: 94 AEPSREYYEKLFARCT--DVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDAR 151
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLE 257
F +G VG F + G ++ SR VG K A EM F +A++A+ +GLVN VV + L+
Sbjct: 152 FAVSGINVGLFCSTPGVAL-SRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAPKALD 210
Query: 258 QETIKWSREILRNSPTAIRVLKSAL-----NAVDDGHAGLQTLGGDATLIFYGTEEGSEG 312
E +I+ A+ + K+ ++ +A G EG
Sbjct: 211 DEIEAMVSKIVAKPRAAVAMGKALFYRQIETDIESAYAD----AGTTMACNMMDPSALEG 266
Query: 313 KTAFVERRRPDF 324
+AF+E+RRP++
Sbjct: 267 VSAFLEKRRPEW 278
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP+RRNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 7/243 (2%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
+T+NRP RNA + +L+ A D+S+ V ++TG F +G D
Sbjct: 18 LTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLNEMAEKDL 76
Query: 144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGP 203
A N R L +++ KP+IA V GYA+G G L ++CD+ +A +NA FG
Sbjct: 77 AATLNDTRP---QLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEI 133
Query: 204 KVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKW 263
+G G+ + R VG A +M TA++A++ GLV+ V P + + ++
Sbjct: 134 TLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQL 193
Query: 264 SREILRNSPTAIRVLKSALNAVDDG--HAGLQTLGGDATLIFYGTEEGSEGKTAFVERRR 321
+ ++ R+SP A++ K AL + AGL TL+ TE+ EG +AF+++R
Sbjct: 194 ASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLL-AATEDRHEGISAFLQKRT 252
Query: 322 PDF 324
PDF
Sbjct: 253 PDF 255
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP+RRNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
R+ A E R Q ++ R+ KP IAMV G+ GGG + CDL I
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAIC 133
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD A FG + G S M+ VG +++ + + ++A +MGLVN VP
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVP 193
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLK 279
L +L + TI+ +R +L +P +R K
Sbjct: 194 LAQLREVTIELARNLLEKNPVVLRAAK 220
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 123/250 (49%), Gaps = 21/250 (8%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
E + I + RP+RRNA V+EL +A A D S I+LTG+GT AFC+G D
Sbjct: 29 EAVLTIELQRPERRNALNSQLVEELTQAIRKA-GDGSARAIVLTGQGT-AFCAGAD---L 83
Query: 139 TRDGYA-DYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
+ D +A DY + +++L + P PV+ + G A+G G L M CDL + A +A
Sbjct: 84 SGDAFAADYPD----RLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAF 139
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLE 257
F K G + +S LVG +AR M A TAE A G+ N + L +
Sbjct: 140 FQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADAQ 199
Query: 258 QETIKWSREILRNSPTAIRVLKSALN---AVDDGHAGLQTLGGDATLIFYGTEEGSEGKT 314
W+ EI R +P AI+ K LN A+++ + L A +G+++ E +
Sbjct: 200 ----AWAAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHKELFDKA----WGSQDVIEAQV 251
Query: 315 AFVERRRPDF 324
A +E+R P F
Sbjct: 252 ARMEKRPPKF 261
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 11/224 (4%)
Query: 64 SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
S EF ++ + +G+A + ++RP NA +E++ A ++ +G ++L G
Sbjct: 21 SMNEFVSVVAD----QGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFG 75
Query: 124 KGTEAFCSGGDQA-LRTRDG-YADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
G E F +G D LRT + AD RL +D + +PKP +A V GYA+G G
Sbjct: 76 -GHEIFSAGDDMPELRTLNAPEADTAARVRLEAID---AVAAIPKPTVAAVTGYALGAGL 131
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
L + D ++ DN FG T G G G ++R+VG +A+E+ F RF+ AEEA
Sbjct: 132 TLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEA 191
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAV 285
+GL++ +V + + + W+R L P A+ K+ +N V
Sbjct: 192 LALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVINDV 235
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 3/245 (1%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+GI I ++ P +RN +K L D + + VII++ +G F SG D
Sbjct: 41 DGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGP-VFSSGHDLKEL 99
Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
T + DY + + IR P PVIAMV G A G L CD+ +A+D + F
Sbjct: 100 TEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSF 159
Query: 199 GQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQ 258
G VG F + G + ++R V K A EM F +A+EA GL++ VVP +L++
Sbjct: 160 ATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQE 218
Query: 259 ETIKWSREILRNSPTAIRVLKSAL-NAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFV 317
ET++ +R+I S + + K+ + L A + +G EG TAF+
Sbjct: 219 ETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFL 278
Query: 318 ERRRP 322
++R+P
Sbjct: 279 QKRKP 283
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 68 FTDIIYEKAVGE---GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
T++ + AV E +A ITI+RPD RNA + A +A+ D V +++TG
Sbjct: 9 LTEVTRQAAVVERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGA 68
Query: 125 GTEAFCSGGDQALRTRDG---YADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
G ++FC+G D +R +A++ +G + + KP IA V G A+GGG
Sbjct: 69 GDKSFCAGADLKAISRGENLYHAEHPEWGFAGYVH-----HFIDKPTIAAVNGTALGGGS 123
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
L + DL IA ++A FG K G G + + K A E+ TA +A
Sbjct: 124 ELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKVALELVLTGEPMTASDA 183
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL 301
+ GL+N VVP + + + + I N+P +++ K DDG G + + T+
Sbjct: 184 LRWGLINEVVPDGTVVEAALALAERITCNAPLSVQASKRVAYGADDGIIGAEEPKWERTI 243
Query: 302 ----IFYGTEEGSEGKTAFVERRRP 322
+E+ EG AF E+R+P
Sbjct: 244 REFTELLKSEDAKEGPLAFAEKRQP 268
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 124/262 (47%), Gaps = 34/262 (12%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+G+ +T+NRP++ NA + L A + +D V ++LTG G AF +G D
Sbjct: 8 DGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAG-RAFSAGQDLT-E 65
Query: 139 TRDGYADYE-NFGRLN-VLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
D DYE + R N V++ + L KP++ V G A G G L + DL +AA A
Sbjct: 66 FGDRKPDYEAHLRRYNRVVE---ALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGA 122
Query: 197 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKL 256
F ++G S ++ RLVG KA+E+ L+ +AEEA +GLV+ VVP EKL
Sbjct: 123 SFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAEKL 182
Query: 257 EQETIKWSREILRNSPTAIRVLKS--------------ALNAVDDGHAGLQTLGGDATLI 302
+E + ++E+ + A + K AL AV G AG
Sbjct: 183 MEEALSLAKELAQGPTRAYALTKKLLLETYRLSLTEALALEAVLQGQAG----------- 231
Query: 303 FYGTEEGSEGKTAFVERRRPDF 324
T++ EG AF E+R P F
Sbjct: 232 --QTQDHEEGVRAFREKRPPRF 251
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 10/247 (4%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
+T+NRP RRNA ++ ++ A++ +D + ILTG G FC+G D T+
Sbjct: 33 VTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGG-YFCAGMDLKAATKKPP 91
Query: 144 ADYENFGRLNV--LDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQT 201
D G + +D ++ RRL KP+IA V G A+ GG + D+ +AA++A FG +
Sbjct: 92 GDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGIS 151
Query: 202 GPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETI 261
K + G + + R + A ++ R TA EA++MGLV VVP + + +
Sbjct: 152 EAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKAL 211
Query: 262 KWSREILRNSPTAIRVLKSALNAVDDGHAG----LQTLGGDATLIFYGTEEGSEGKTAFV 317
+ + I N P A++ + + + H + T G + + +++ EG AF
Sbjct: 212 EIAEIIAANGPLAVQAILRTIRETEGMHENEAFKIDTRIG---IEVFLSDDAKEGPQAFA 268
Query: 318 ERRRPDF 324
++R+P+F
Sbjct: 269 QKRKPNF 275
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-Q 135
V +G+A+ITI P RNA ++E+ A N A +D SVG +++TG +AFC+G +
Sbjct: 9 VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
+ G A + R+ L Q I R+ +PV+A + G A GGG + + D+ I
Sbjct: 68 EIPLDKGVAGVRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAIC 127
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD+A F +G + S ++R+VG ++A E+ R EEA+ GLV+ V P
Sbjct: 128 ADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYP 187
Query: 253 LEKLEQETIKWSREILRNSPTAIRVL 278
++ + K +RE L +PT ++V+
Sbjct: 188 KDEFREVAWKVARE-LAAAPTHLQVM 212
>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE
(Crotonase) From Legionella Pneumophila Subsp.
Pneumophila Str. Philadelphia 1
Length = 268
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+D++YE + + + +T+NR + NAF + E+ + A +D++V VI+L G
Sbjct: 3 LSDLLYE--IQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKH 60
Query: 128 AFCSGGDQA-LRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVAGYAVGGGHVLHM 185
F +G D +++ + + EN VL +L I + PKP IAMV G A GGG L
Sbjct: 61 -FSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAA 119
Query: 186 VCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMG 245
CD+ IA+ +A F + K+G A ++ R +G + A+ ++ A + A A +
Sbjct: 120 ACDIAIASTSARFCFSEVKLGLIPAVISPYVV-RAIGERAAKMLFMSAEVFDATRAYSLN 178
Query: 246 LVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLIFYG 305
LV VP + L + T+K++ +I N+P A++ K V + + + A+LI +
Sbjct: 179 LVQHCVPDDTLLEFTLKYASQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHK 238
Query: 306 --TEEGSEGKTAFVERRRPDF 324
++EG EG AF+ + P++
Sbjct: 239 RVSDEGQEGLKAFLNKEIPNW 259
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 6/206 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-Q 135
V +G+A+ITI P RNA ++E+ A N A +D SVG +++TG +AFC+G +
Sbjct: 9 VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 136 ALRTRDGYADYENFGRLNVL---DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
+ G A + R+ L + +I R+ +PV+A + G A GGG + + D+ I
Sbjct: 68 EIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAIC 127
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD+A F +G + S ++R+VG ++A E+ R EEA+ GLV+ V P
Sbjct: 128 ADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYP 187
Query: 253 LEKLEQETIKWSREILRNSPTAIRVL 278
++ + K +RE L +PT ++V+
Sbjct: 188 KDEFREVAWKVARE-LAAAPTHLQVM 212
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 6/206 (2%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-Q 135
V +G+A+ITI P RNA ++E+ A N A +D SVG +++TG +AFC+G +
Sbjct: 9 VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 136 ALRTRDGYADYENFGRLNVL---DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIA 192
+ G A + R+ L + +I R+ +PV+A + G A GGG + + D+ I
Sbjct: 68 EIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAIC 127
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
AD+A F +G + S ++R+VG ++A E+ R EEA+ GLV+ V P
Sbjct: 128 ADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTDRTLYPEEAKDWGLVSRVYP 187
Query: 253 LEKLEQETIKWSREILRNSPTAIRVL 278
++ + K +RE L +PT ++V+
Sbjct: 188 KDEFREVAWKVARE-LAAAPTHLQVM 212
>pdb|1EF8|A Chain A, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF8|B Chain B, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF8|C Chain C, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF9|A Chain A, The Crystal Structure Of Methylmalonyl Coa Decarboxylase
Complexed With 2s-Carboxypropyl Coa
Length = 261
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRT 139
+A I N + NA + +L++A +D +I+ G++ F +G D L +
Sbjct: 14 VAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPS 73
Query: 140 --RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
RD + Y++ R + I++ PKP+I+MV G GG + M DL IAA +
Sbjct: 74 GGRDPLS-YDDPLR----QITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTST 128
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLE 257
F T +G G ++R G +E+ F A TA+ A +G++N VV +E+LE
Sbjct: 129 FSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELE 188
Query: 258 QETIKWSREILRNSPTAIRVLKSALNAVDDGHA----GLQTLGGDATLIFYGTEEGSEGK 313
T++ + I +P AI V+K L + + H + + G + Y +E+ EG
Sbjct: 189 DFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAV-YDSEDYQEGM 247
Query: 314 TAFVERRRPDFL 325
AF+E+R+P+F+
Sbjct: 248 NAFLEKRKPNFV 259
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 15/267 (5%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
F I YE V A IT+NRPD NA PH + EL A+++A +D V ++++TG G
Sbjct: 10 FDTIKYE--VDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTG-R 66
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDL-------QVQIRRLPKPVIAMVAGYAVGGG 180
AFCSG D DG YE L+ D R + KPV+ V G G G
Sbjct: 67 AFCSGADVKEIPEDGKVIYER-PYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAG 125
Query: 181 HVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARF--YTA 238
D+ IA++ A F +G AG +SR++ A M + + +A
Sbjct: 126 MDWVTTTDIVIASEQATFFDPHVSIG-LVAGRELVRVSRVLPRSIALRMALMGKHERMSA 184
Query: 239 EEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSA-LNAVDDGHAGLQTLGG 297
+ A ++GL++ +V ++L + + + + N+P A+R + A L ++ + L
Sbjct: 185 QRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLHEAEILAE 244
Query: 298 DATLIFYGTEEGSEGKTAFVERRRPDF 324
TE+ +EG AFVE+R+P++
Sbjct: 245 TFRERVLRTEDAAEGPRAFVEKRQPNW 271
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
TD I E + +T+NRP RNA A DA D V V+I+TG
Sbjct: 4 SMTDEILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITG-AD 62
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVAGYAVGGGHVLHM 185
FC+G D + G + L D+ + L KPVI + G AV GG L +
Sbjct: 63 PVFCAG-----------LDLKELGGSSALPDISPRWPALTKPVIGAINGAAVTGGLELAL 111
Query: 186 VCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMG 245
CD+ IA++NA F T +VG S + + VG AR M + +A +A + G
Sbjct: 112 YCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAG 171
Query: 246 LVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGH--AGL 292
LV VVP ++L + I+ N+ A+R L ++ + +DD AGL
Sbjct: 172 LVTEVVPHDQLLGAAQAVAASIVGNNQNAVRALLASYHRIDDAQTSAGL 220
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
TD I E + +T+NRP RNA A DA D V V+I+TG
Sbjct: 22 MTDEILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITG-ADP 80
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMV 186
FC+G D + G + L D+ + L KPVI + G AV GG L +
Sbjct: 81 VFCAG-----------LDLKELGGSSALPDISPRWPALTKPVIGAINGAAVTGGLELALY 129
Query: 187 CDLTIAADNAIFGQTGPKVGSFDAGYGSSI-MSRLVGPKKAREMWFLARFYTAEEAEKMG 245
CD+ IA++NA F T +VG +G S+ + + VG AR M + +A +A + G
Sbjct: 130 CDILIASENARFADTHARVGLLPT-WGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAG 188
Query: 246 LVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGH--AGL 292
LV VVP ++L + I+ N+ A+R L ++ + +DD AGL
Sbjct: 189 LVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSYHRIDDAQTSAGL 237
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+ +I ++RP++ NA ++EL DA D SV ++LTG G AFCSGGD
Sbjct: 16 VLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAG-RAFCSGGDLTGGDT 74
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
G AD N + I LPKPVIA V G AVG G L + CDL +AA + F
Sbjct: 75 AGAADAAN-------RVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQL 127
Query: 201 TGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQET 260
+VG G S+++ L+G + M A +A A + G+++ + ++ E
Sbjct: 128 AFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVL 187
Query: 261 IKWSREILRNSPTAIRVLKSALNAVDDGHAG-LQTLGGDATLIFYGTEEGSEGKTAFVER 319
R + A K AL A +Q + + L T + EG AF ER
Sbjct: 188 TDVLRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRER 247
Query: 320 RRPDF 324
R P+F
Sbjct: 248 RTPNF 252
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
G+ +D++ + G + + INRP RNA T L AF + D S V +L G
Sbjct: 3 GSMVSDLVQVERNGP-VTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGN 61
Query: 125 GTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLH 184
G FC+G D L+ G A+ R + L KPVIA V+GYAV GG L
Sbjct: 62 GGT-FCAGAD--LKAF-GTAEANAVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELA 117
Query: 185 MVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKM 244
+ CDL +A +A+FG + G G+ + RL+G +A +M R A+EA +
Sbjct: 118 LWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRAVQADEALAI 177
Query: 245 GLVNTVVP 252
GL N VVP
Sbjct: 178 GLANRVVP 185
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 39/268 (14%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ----- 135
IA +T+NRP+R NA + + D D+ V +++TG G + FCSG DQ
Sbjct: 34 IALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAG-KGFCSGADQKSAGP 92
Query: 136 ------------ALRTRDGYADYENFGRLNVLD-LQVQIRRLPKPVIAMVAGYAVGGGHV 182
ALR+ + +LD + + +RR+ +PVIA + G A+GGG
Sbjct: 93 IPHIGGLTQPTIALRS------------MELLDEVILTLRRMHQPVIAAINGAAIGGGLC 140
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYG-SSIMSRLVGPKKAREMWFLARFYTAEEA 241
L + CD+ +A+ +A F G G + G S ++ R +G +A ++ R A+EA
Sbjct: 141 LALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRDVDADEA 200
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLK----SALNAVD-DGHAGLQTLG 296
E++GLV+ V E L +E I S I + K S L+A + H + LG
Sbjct: 201 ERIGLVSRKVASESLLEECYAIGERIAGFSRPGIELTKRTIWSGLDAASLESHMHQEGLG 260
Query: 297 GDATLIFYGTEEGSEGKTAFVERRRPDF 324
+ T+ E A E+R +F
Sbjct: 261 --QLYVRLLTDNFEEATAARKEKRPAEF 286
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 115/252 (45%), Gaps = 22/252 (8%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD--QALRTRD 141
+T+NRP RRNA + V + A+++ D + ILTG G+ A+C GGD RD
Sbjct: 22 LTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGS-AYCVGGDLSDGWMVRD 80
Query: 142 GYA---DYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
G A D G+ +L L KP+IA V G +GGG + D+ ++ ++A F
Sbjct: 81 GSAPPLDPATIGKGLLLS-----HTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATF 135
Query: 199 GQTGPKVGSFDAGYGSSI-MSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLE 257
G + G G GS + + R + KA EM TA EA GLV VVP
Sbjct: 136 GLPEVQRG-LVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTAL 194
Query: 258 QETIKWSREILRNSPTAIR-----VLKSALNAVDDGHAGLQTLGGDATLIFYGTEEGSEG 312
+ + I+RN P A+R +++S A +D A + T + + EG
Sbjct: 195 DKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARA----IEARLTRPVITSADAREG 250
Query: 313 KTAFVERRRPDF 324
AF E+R F
Sbjct: 251 LAAFKEKREARF 262
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 23/247 (9%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRTRDG 142
ITINRPD RNA + L A + + + V I+TG G FC+G D +A + +
Sbjct: 20 ITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGN-FCAGMDLKAFVSGEA 78
Query: 143 YADYENFGRLNVLDLQVQIRRLP--KPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
G NV P KP+IA V G+A+ GG L + CDL +A +A FG
Sbjct: 79 VLSERGLGFTNV----------PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGI 128
Query: 201 TGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQET 260
K G G + + + A E+ +TAE+A K G +N +V +
Sbjct: 129 PEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTA 188
Query: 261 IKWSREILRNSPTAIR-----VLKSALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTA 315
++ + +I N P A+ +++SA A ++ A G+ + + +E+ EG A
Sbjct: 189 LELAAKITANGPLAVAATKRIIIESASWAPEEAFAKQ----GEILMPIFVSEDAKEGAKA 244
Query: 316 FVERRRP 322
F E+R P
Sbjct: 245 FAEKRAP 251
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
++YE G G+A IT NR DR NA+ P A + A D + VI+LTG+G FC
Sbjct: 31 VLYEATPG-GVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRG-RGFC 88
Query: 131 SGGDQALRTRDGYADYENF----GRLNVLDLQVQ-----IRRLPKPVIAMVAGYAVGGGH 181
+G L + D A Y+ N+ DL + + L KPVIA + G VG G
Sbjct: 89 AGA--YLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGL 146
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSS-IMSRLVGPKKAREMWFLARFYTAEE 240
++CD+ AA A F + G A +G S I+ RL A ++ R + AEE
Sbjct: 147 TQALMCDVRFAAAGAKFAAVFARRG-LIAEFGISWILPRLTSWAVALDLLLSGRTFLAEE 205
Query: 241 AEKMGLVNTVVPLEKLEQETIKWSREILR-NSPTAIRVLK-----SALNAVDDGHAGLQT 294
A ++GLV VV E+L ++++ +I R SP+++ V+K A V + + +
Sbjct: 206 AAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKRQVYGDATRDVVEATSHAEV 265
Query: 295 LGGDATLIFYGTEEGSEGKTAFVERRRPDF 324
L +A + EG +F+E+R P F
Sbjct: 266 LLREA----MPRPDVIEGIVSFLEKRPPQF 291
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRTRDG 142
ITINRP+ RNA + A +A+ D V ++LTG G ++FC+G D +A+ R+
Sbjct: 22 ITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARREN 81
Query: 143 --YADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+ D+ +G + + KP IA V G A+GGG L + DL +A + A FG
Sbjct: 82 LYHPDHPEWGFAGYVRHFID-----KPTIAAVNGTALGGGTELALASDLVVADERAQFGL 136
Query: 201 TGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQET 260
K G A G ++ + K A + +A A GL+N VV +
Sbjct: 137 PEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAA 196
Query: 261 IKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL----IFYGTEEGSEGKTAF 316
+ + I N+P +++ K VDDG G D T+ +E+ EG AF
Sbjct: 197 LALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAF 256
Query: 317 VERRRP 322
E+R P
Sbjct: 257 AEKREP 262
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRTRDG 142
ITINRP+ RNA + A +A+ D V ++LTG G ++FC+G D +A+ R+
Sbjct: 22 ITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARREN 81
Query: 143 --YADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+ D+ +G + + KP IA V G A+GGG L + DL +A + A FG
Sbjct: 82 LYHPDHPEWGFAGYVRHFID-----KPTIAAVNGTALGGGTELALASDLVVADERAQFGL 136
Query: 201 TGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQET 260
K G A G ++ + K A + +A A GL+N VV +
Sbjct: 137 PEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAA 196
Query: 261 IKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL----IFYGTEEGSEGKTAF 316
+ + I N+P +++ K VDDG G D T+ +E+ EG AF
Sbjct: 197 LALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAF 256
Query: 317 VERRRP 322
E+R P
Sbjct: 257 AEKREP 262
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+GI KI NRP ++NA E+ RA A D S+ + +LTG G + + SG D
Sbjct: 34 DGITKIXFNRPKKKNAINTEXYHEIXRALKAASKDDSI-ITVLTGNG-DYYSSGNDLTNF 91
Query: 139 TRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADN 195
T E + N + L+ + PKP+IA+V G AVG L + D A+D
Sbjct: 92 TDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDR 151
Query: 196 AIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEK 255
A F +G G S ++ P KA E + TA EA GLV V P
Sbjct: 152 ATFHTPFSHLGQSPEGCSSYTFPKIXSPAKATEXLIFGKKLTAGEACAQGLVTEVFPDST 211
Query: 256 LEQETIKWSREILRNSPTAIRVLKSAL 282
++E + + P A+R+ K +
Sbjct: 212 FQKEVWTRLKAFAKLPPNALRISKEVI 238
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QAL 137
+GIA+I ++ ++ N++ KE A +D R D + V+I+ + F +G D L
Sbjct: 17 DGIAEIHLH-INKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVXSDVPKFFSAGADINFL 75
Query: 138 RTRDGYADYENFGRLN-VLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
R+ D + N LD +I R P+ IA + G+ VGGG + CDL D A
Sbjct: 76 RSADPRFKTQFCLFCNETLD---KIARSPQVYIACLEGHTVGGGLEXALACDLRFXGDEA 132
Query: 197 IFGQTG-PKV--GSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPL 253
G+ G P+V G G+ ++RL+G +A + T +EA ++GLVN V P
Sbjct: 133 --GKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDXNITGETITPQEALEIGLVNRVFPQ 190
Query: 254 EKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQT-LGGDATLIFYGTEEGSEG 312
+ + T +++R++ ++ A+ +K A+ + + G+ + + +E+ EG
Sbjct: 191 AETRERTREYARKLANSATYAVSNIKLAIXNGKEXPLNVAIRYEGELQNLLFRSEDAKEG 250
Query: 313 KTAFVERRRPDF 324
+AF+E+R+P++
Sbjct: 251 LSAFLEKRQPNW 262
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 13/266 (4%)
Query: 65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
G+ T++ E + +G+A +T++ P RN+F ++L A+ DD +V VI+LTG
Sbjct: 3 GSMVTELHEE--IRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTG- 59
Query: 125 GTEAFCSGGDQALRTRDGYADYEN--FGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
AFCSG Q + +A N F V ++R PVIA V G+A+G G
Sbjct: 60 APPAFCSGA-QISAAAETFAAPRNPDFSASPVQPAAFELR---TPVIAAVNGHAIGIGMT 115
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAE 242
L + D+ I A+ + + G + RLVG A E+ ++A+ A
Sbjct: 116 LALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAV 175
Query: 243 KMGLVNTVVPLEKLEQETIKWSREILRN-SPTAIRVLKSAL-NAVDDGHAGLQTLGGDAT 300
+ GL N +P K+ ++ + +I N +P + + K L +A G + + +
Sbjct: 176 ETGLANRCLPAGKVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSAAEVAARETA 235
Query: 301 --LIFYGTEEGSEGKTAFVERRRPDF 324
L G+++ +EG AF++ R P +
Sbjct: 236 DHLRLMGSQDAAEGPRAFIDGRPPRW 261
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 5/252 (1%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
V +G+ +T+NRP+R N+F +L D ++ ++LTG G FC+G D
Sbjct: 21 VEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAG-RGFCAGQDLN 79
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRRL---PKPVIAMVAGYAVGGGHVLHMVCDLTIAA 193
R D + G +RRL PKPVI V G A G G L + D+ IAA
Sbjct: 80 DRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAA 139
Query: 194 DNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPL 253
+A F K+G G+ ++ R+ G +A + L +AE+A + G++ VV
Sbjct: 140 RSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDD 199
Query: 254 EKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQT-LGGDATLIFYGTEEGSEG 312
E L + +R + + ++K A+N+ + Q L D + + + EG
Sbjct: 200 ETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREG 259
Query: 313 KTAFVERRRPDF 324
+AF+ +R P F
Sbjct: 260 VSAFLAKRSPQF 271
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 98 HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRTRDGYADYENFGRLNVLD 156
H V ELI + D ++ V+++ G+G F +G D + + +L +
Sbjct: 35 HDVTELI---DQVEKDDNIRVVVIHGEG-RFFSAGADIKEFTSVTEAKQATELAQLGQVT 90
Query: 157 LQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSI 216
+ ++ + KPVIA + G A+GGG C A ++A G +G G+
Sbjct: 91 FE-RVEKCSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGLPELTLGLIPGFAGTQR 149
Query: 217 MSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIR 276
+ R VG KA E + T EA K GLVN V E +T+K +++I SP R
Sbjct: 150 LPRYVGKAKACEXXLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATAR 209
Query: 277 VLKSALNAVDDGH--AGLQTLGGDATLI--FYGTEEGSEGKTAFVERRRPDF 324
+ L H G+Q +A + + +E+G EG AF+E+R+P F
Sbjct: 210 AVLELLQTTKSSHYYEGVQR---EAQIFGEVFTSEDGREGVAAFLEKRKPSF 258
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+ +T+NRP RNA RA +DA++D V V+I+TG FC+G
Sbjct: 19 VRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTG-ADPVFCAG-------- 69
Query: 141 DGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFG 199
D + G L D+ + + KPVI + G AV GG L + CD+ IA++NA F
Sbjct: 70 ---LDLKELGDTTELPDISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFA 126
Query: 200 QTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQE 259
T +VG S + + VG AR M + +A++A + GLV VV + L
Sbjct: 127 DTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTA 186
Query: 260 TIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGG 297
+ + I+ N+ A+R L + + +D LQT G
Sbjct: 187 ARRVAASIVGNNQKAVRALLDSYHRID----ALQTGGA 220
>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD-- 141
I +NRP +RNAF ++EL A + D+ + +L G+G F +G D A +
Sbjct: 22 IGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEG-PLFTAGLDLASVAAEIQ 80
Query: 142 GYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQT 201
G A G +N QV R+L KP++ V G + G L + D+ IA + A F Q
Sbjct: 81 GGASLTPEGGIN--PWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQL 138
Query: 202 GPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETI 261
G + G + R G A A + A EA ++G+V +VP+ + I
Sbjct: 139 EVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAI 198
Query: 262 KWSREILRNSPTAIR-VLKSALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFVERR 320
++ I R +P ++ L++A AV +G A + + +E+ + G AF+ R
Sbjct: 199 AIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRT 258
Query: 321 RPDFL 325
+F+
Sbjct: 259 TAEFV 263
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 16/255 (6%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
GI + INR +N+ + +K L +A + + D V II+ + FC+G D R
Sbjct: 21 GIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERA 80
Query: 140 RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFG 199
+ ++ F + + I LP P IA + G A+GGG L + CD+ +AA +A G
Sbjct: 81 KMSSSEVGPFVS-KIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMG 139
Query: 200 QTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQ- 258
K+ G G+ + R +G A+E+ F AR +EA+ +GL++ V LE+ ++
Sbjct: 140 LVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHV--LEQNQEG 197
Query: 259 -----ETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLIFYG----TEEG 309
+ + +RE L P A+RV K A+N G G Y T++
Sbjct: 198 DAAYRKALDLAREFLPQGPVAMRVAKLAIN---QGMEVDLVTGLAIEEACYAQTIPTKDR 254
Query: 310 SEGKTAFVERRRPDF 324
EG AF E+R P +
Sbjct: 255 LEGLLAFKEKRPPRY 269
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 22/266 (8%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ I YE V +A +T+NRPD+ NAF E+ +A A D +V +++TG G
Sbjct: 2 YETIRYE--VKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAG-R 58
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVC 187
AFC+G D + T + D+ + R + + L KPV+A V G A G G L + C
Sbjct: 59 AFCAGEDLSGVTEE--MDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALAC 116
Query: 188 DLTIAADNAIFGQTGPKVGSF-DAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGL 246
D + ++ A F VG DAG+ + RLVG KA E+ L TAEEA +GL
Sbjct: 117 DFRLLSEKASFAPAFIHVGLVPDAGH-LYYLPRLVGRAKALELAVLGEKVTAEEAAALGL 175
Query: 247 VNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDG--------HAGLQTLGGD 298
V+PL E+E +++ + AI ++K L ++ A Q + G
Sbjct: 176 ATKVIPLSDWEEEVKQFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAG- 234
Query: 299 ATLIFYGTEEGSEGKTAFVERRRPDF 324
T + EG AF E+R+P F
Sbjct: 235 ------LTSDHREGVKAFFEKRKPLF 254
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
D A G +A++T+N P RNA V +L + DA D +V V++L G
Sbjct: 8 LVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGT 67
Query: 128 AFCSGGDQALRTRDGYAD------YENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGH 181
FC+G D + G E + L + RL PVIA + G+ GG
Sbjct: 68 -FCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRL--PVIAAIDGHVRAGGF 124
Query: 182 VLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEA 241
L CD+ +A + F T ++G A +++ +L AR + + A A
Sbjct: 125 GLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLPKLSARAAAR-YYLTGEKFDARRA 183
Query: 242 EKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATL 301
E++GL+ E L+ + ++ R SP + K+ A A L+ DA
Sbjct: 184 EEIGLITMAA--EDLDAAIDQLVTDVGRGSPQGLAASKALTTA-----AVLERFDRDAER 236
Query: 302 I------FYGTEEGSEGKTAFVERRRPDF 324
+ + ++E EG AF+E+R P++
Sbjct: 237 LAEESARLFVSDEAREGMLAFLEKRSPNW 265
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+ + INRP+ +NA + +A ++A + V V++L G F +G D ++
Sbjct: 14 GVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRG-AEHDFTAGND--MKD 70
Query: 140 RDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
G+ N G + V ++ RL KP+I V G A+G G + + DL A + A
Sbjct: 71 FMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTA 130
Query: 197 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP---- 252
+F +G G S ++ + G KA E+ F A+ + AE A + GLVN +V
Sbjct: 131 LFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVEDAYA 190
Query: 253 --------LEKLEQETIKWSREILRNSPTAIRVLKSALNAVD-DGHAGLQTLGGDATLIF 303
L L ++K ++ ++++ L + +D + +Q +
Sbjct: 191 TAQATAQHLTALPLASLKQTKALMKHD------LDQIIECIDHEAEIFMQRV-------- 236
Query: 304 YGTEEGSEGKTAFVERRRPDF 324
+ E E AF+++R+PDF
Sbjct: 237 -QSPEMLEAVQAFMQKRQPDF 256
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+ + ++ P N+ P ++L + D V V+++ G+G +AF SGG L
Sbjct: 23 GVLNLVLDSPGL-NSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEG-KAFSSGGSFEL-I 79
Query: 140 RDGYADYENFGRLNVL----DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADN 195
+ DYE GR+ ++ DL + + L KPV++ + G AVG G V+ ++ D+++A+
Sbjct: 80 DETIGDYE--GRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASAT 137
Query: 196 AIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEK 255
A K+G + + LVG KA+ + EEAE++GLV+T V ++
Sbjct: 138 AKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDE 197
Query: 256 LEQETIKWSREILRNSPTAIRVLKSALN 283
+ + + + + + AIR K +LN
Sbjct: 198 VLPTATRLAENLAQGAQNAIRWTKRSLN 225
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSG-------- 132
+ + +NRP++RNA +E++ FN D+ ++++G G + F +G
Sbjct: 41 VLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAG-KMFTAGIDLMDMAS 99
Query: 133 ------GDQALRT----RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
GD R RD Y+ NV I R PKPVIA V G +GGG
Sbjct: 100 DILQPKGDDVARISWYLRDIITRYQE--TFNV------IERCPKPVIAAVHGGCIGGGVD 151
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSI-----MSRLVGPKK-AREMWFLARFY 236
L CD+ A +A F +V D G + + + +++G + E+ F AR
Sbjct: 152 LVTACDIRYCAQDAFF-----QVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKM 206
Query: 237 TAEEAEKMGLVNTVVP-LEKLEQETIKWSREILRNSPTAIRVLKSAL 282
A+EA GLV+ V P E + + + EI SP A++ K L
Sbjct: 207 MADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNL 253
>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1
pdb|2FBM|B Chain B, Acetyltransferase Domain Of Cdy1
pdb|2FBM|C Chain C, Acetyltransferase Domain Of Cdy1
Length = 291
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 66 TEFTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
+ + DI+ +K +G +I ++ R +NA +KE++ A N A D S +++ +
Sbjct: 20 STYRDIVVKKE--DGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAA 76
Query: 125 GTEAFCSGGD-----QALRTRDGYADYENFGRL-NVLDLQVQIRRLPKPVIAMVAGYAVG 178
G+ FC G D + LR A E + N ++ +Q + KP++ V G A+G
Sbjct: 77 GS-VFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 132
Query: 179 GGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTA 238
G + +CDL A + A F G G S +++G A EM R TA
Sbjct: 133 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTA 192
Query: 239 EEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKS 280
EA GLV+ V QE + +E+ +P + K+
Sbjct: 193 REACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKA 234
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA-LRTRDG 142
+T+NRP+ NAF +A DA DD V V++LTG G F +G D A ++ R
Sbjct: 19 LTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSG-RGFSAGTDLAEMQARIT 77
Query: 143 YADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTG 202
++ G+ L + PKP+I V G VG G + DL + A
Sbjct: 78 DPNFSE-GKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPF 136
Query: 203 PKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIK 262
+G S ++ +LVG + A + + + AEEA +MGLV + E+L E +
Sbjct: 137 TSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRICSPEELLPEARR 196
Query: 263 WSREILRNSP 272
+ EIL P
Sbjct: 197 HA-EILAAKP 205
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGG--DQALRTRD 141
IT++ P+++N L+ A +++S+ IIL K F SG + L
Sbjct: 17 ITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICAS 76
Query: 142 GYADYENFGRLNVLDLQV-QIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQ 200
+D L+VL+ V +I PK +A++ GYA GGG + + CD IA A F +
Sbjct: 77 DQSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLE 136
Query: 201 TGPKVG-SFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQE 259
K+G S D G S + R++G ++ + + +T+EEA ++GL+ + ++ QE
Sbjct: 137 NFHKMGISPDLG-ASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQE 195
Query: 260 TIK 262
+K
Sbjct: 196 RVK 198
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG-KGTEAFCSGGD-QALR 138
+ + +NRP RNA T L+ AF + D V +L G GT FC+G D +A+
Sbjct: 21 VTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGT--FCAGADLKAMG 78
Query: 139 TRDGYADYENF-GRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
T G + + G + L RL KPVIA ++G+AV GG L + CDL + ++A+
Sbjct: 79 TDRGNELHPHGPGPMGPSRL-----RLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAV 133
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVV 251
G + G G+ + RL+G +A ++ R A EA +GLVN VV
Sbjct: 134 LGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVV 187
>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy
pdb|2FW2|B Chain B, Catalytic Domain Of Cdy
pdb|2FW2|C Chain C, Catalytic Domain Of Cdy
pdb|2FW2|D Chain D, Catalytic Domain Of Cdy
pdb|2FW2|E Chain E, Catalytic Domain Of Cdy
pdb|2FW2|F Chain F, Catalytic Domain Of Cdy
Length = 260
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 68 FTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
+ DI+ +K +G +I ++ R +NA +KE++ A N A D S +++ + G+
Sbjct: 3 YRDIVVKKE--DGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDS-KLVLFSAAGS 59
Query: 127 EAFCSGGD-----QALRTRDGYADYENFGRL-NVLDLQVQIRRLPKPVIAMVAGYAVGGG 180
FC G D + LR A E + N ++ +Q + KP++ V G A+G G
Sbjct: 60 -VFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIGLG 115
Query: 181 HVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEE 240
+ +CDL A + A F G G S +++G A EM R TA E
Sbjct: 116 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 175
Query: 241 AEKMGLVNTVVPLEKLEQETIKWSREI 267
A GLV+ V QE + +E+
Sbjct: 176 ACAKGLVSQVFLTGTFTQEVMIQIKEL 202
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 101/241 (41%), Gaps = 10/241 (4%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
ITINRP +N+ + L A + D+ + V ILTG G +FC+G D R
Sbjct: 28 ITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGG-SFCAGMDLKAFARGEN 86
Query: 144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGP 203
E G L R KP+IA V GYA+ GG L + DL +AA ++ FG
Sbjct: 87 VVVEGRG------LGFTERPPAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEV 140
Query: 204 KVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKW 263
K G G G + + A E+ +AE A +G+VN + I
Sbjct: 141 KRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAERAHALGMVNVLAEPGAALDAAIAL 200
Query: 264 SREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLIF--YGTEEGSEGKTAFVERRR 321
+ +I N P A+ K + G + ++F + + + EG AF E+R
Sbjct: 201 AEKITANGPLAVAATKRIITE-SRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRP 259
Query: 322 P 322
P
Sbjct: 260 P 260
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSG-------- 132
+ + +NRP++RNA +EL+ F DS ++++G G + F SG
Sbjct: 14 VLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG-KMFTSGIDLMDMAS 72
Query: 133 ------GDQALRT----RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHV 182
GD R RD + Y+ + I + PKPVIA + G +GGG
Sbjct: 73 DILQPPGDDVARIAWYLRDLISRYQKTFTV--------IEKCPKPVIAAIHGGCIGGGVD 124
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSI-----MSRLVGPKK-AREMWFLARFY 236
L CD+ +A F +V D G + + + +++G + E+ F AR
Sbjct: 125 LISACDIRYCTQDAFF-----QVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKM 179
Query: 237 TAEEAEKMGLVNTVVP-LEKLEQETIKWSREILRNSPTAIR 276
A+EA GLV+ V P + + + +I SP A++
Sbjct: 180 MADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQ 220
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+G G+ +IT+ RN F P V+ L F+ + V+ILTG G F SG +
Sbjct: 9 LGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGN-YFSSGASKE 67
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
R + G + VLDL I P+IA + G++ GGG +L + D + + +
Sbjct: 68 FLIR------KTRGEVEVLDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQES 121
Query: 197 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKL 256
++ K G G S I+ +G + A+EM + Y +E + G+ VV + +
Sbjct: 122 VYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQDV 181
Query: 257 EQETIKWSREILRNSPTAIRVLKSALNA 284
+ ++I ++ ++ LK L+A
Sbjct: 182 LNYAQQLGQKIAKSPRLSLVALKQHLSA 209
>pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|B Chain B, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|C Chain C, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|D Chain D, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|E Chain E, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|F Chain F, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|G Chain G, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|H Chain H, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|I Chain I, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|J Chain J, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|K Chain K, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|L Chain L, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
Length = 263
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
D + + + EG+ +T+ R R + L A A D V V+++ G G F
Sbjct: 6 DGLLGEVLSEGVLTLTLGRAPAHPLSRA-XIAALHDALRRAXGDDHVHVLVIHGPG-RIF 63
Query: 130 CSGGDQALRTRDGYADYENFGRLNVLDL-------QVQIRRLPKPVIAMVAGYAVGGGHV 182
C+G D L+ + + GR V DL + + PKP IA+V G A G
Sbjct: 64 CAGHD--LKEIGRHRADPDEGRAFVTDLFEACSALXLDLAHCPKPTIALVEGIATAAGLQ 121
Query: 183 LHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAE 242
L CDL A+ A F G + G F ++ SR++G + E Y A+ A
Sbjct: 122 LXAACDLAYASPAARFCLPGVQNGGFXTTPAVAV-SRVIGRRAVTEXALTGATYDADWAL 180
Query: 243 KMGLVNTVVP 252
GL+N ++P
Sbjct: 181 AAGLINRILP 190
>pdb|2PG8|A Chain A, Crystal Structure Of R254k Mutanat Of Dpgc With Bound
Substrate Analog
pdb|2PG8|B Chain B, Crystal Structure Of R254k Mutanat Of Dpgc With Bound
Substrate Analog
pdb|2PG8|C Chain C, Crystal Structure Of R254k Mutanat Of Dpgc With Bound
Substrate Analog
Length = 417
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 27/247 (10%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG--------KGTEAFC 130
+G+A++T+ R DR NA V ++ A + A D V V +L G +G F
Sbjct: 164 DGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFS 223
Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIR---------------RLPKPVIAMVAGY 175
+G + ++ G + + R + + +R R+ KP +A V G+
Sbjct: 224 AGINLKYLSQGGISLVDFLMRKELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGF 283
Query: 176 AVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARF 235
A+GGG L +V D +A+ +A F K G G + + R GP+ +R++ R
Sbjct: 284 AIGGGAQLLLVFDRVLASSDAYFSLPAAKEGII-PGAANLRLGRFAGPRVSRQVILEGRR 342
Query: 236 YTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTL 295
A+E E LV+ VV ++L+ R + R A+ + LN D+ G +
Sbjct: 343 IWAKEPEARLLVDEVVEPDELDAAI---ERSLTRLDGDAVLANRRMLNLADESPDGFRAY 399
Query: 296 GGDATLI 302
+ L+
Sbjct: 400 MAEFALM 406
>pdb|2NP9|A Chain A, Crystal Structure Of A Dioxygenase In The Crotonase
Superfamily
pdb|2NP9|B Chain B, Crystal Structure Of A Dioxygenase In The Crotonase
Superfamily
pdb|2NP9|C Chain C, Crystal Structure Of A Dioxygenase In The Crotonase
Superfamily
Length = 440
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 27/247 (10%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG--------KGTEAFC 130
+G+A++T+ R DR NA V ++ A + A D V V +L G +G F
Sbjct: 175 DGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFS 234
Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIR---------------RLPKPVIAMVAGY 175
+G + ++ G + + R + + +R R+ KP +A V G+
Sbjct: 235 AGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGF 294
Query: 176 AVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARF 235
A+GGG L +V D +A+ +A F K G G + + R GP+ +R++ R
Sbjct: 295 AIGGGAQLLLVFDRVLASSDAYFSLPAAKEGII-PGAANLRLGRFAGPRVSRQVILEGRR 353
Query: 236 YTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTL 295
A+E E LV+ VV ++L+ R + R A+ + LN D+ G +
Sbjct: 354 IWAKEPEARLLVDEVVEPDELDAAI---ERSLTRLDGDAVLANRRMLNLADESPDGFRAY 410
Query: 296 GGDATLI 302
+ L+
Sbjct: 411 MAEFALM 417
>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula
pdb|2Q34|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula, Rhombohedral Crystal Form
Length = 243
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+G G+ +IT RN F P V+ L F+ + V+ILTG G F SG +
Sbjct: 9 LGNGVVQITXKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGN-YFSSGASKE 67
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
R + G + VLDL I P+IA G++ GGG +L + D + + +
Sbjct: 68 YLIR------KTRGEVEVLDLSGLILDCEIPIIAAXQGHSFGGGLLLGLYADFVVFSQES 121
Query: 197 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKL 256
++ K G G S I+ +G + A+E + Y +E + G+ VV + +
Sbjct: 122 VYATNFXKYGFTPVGATSLILREKLGSELAQEXIYTGENYRGKELAERGIPFPVVSRQDV 181
Query: 257 EQETIKWSREILRNSPTAIRVLKSALNA 284
+ ++I ++ ++ LK L+A
Sbjct: 182 LNYAQQLGQKIAKSPRLSLVALKQHLSA 209
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 93 NAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRL 152
NA P ++E+ A D +V I++ G FC+G D G++ + L
Sbjct: 42 NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGN-FCAGADI-----HGFSAFTP--GL 93
Query: 153 NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGY 212
+ L +I+R KPV+A + G A+GGG L + C IA A G +G
Sbjct: 94 ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPAVTLGILPGAR 153
Query: 213 GSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREIL 268
G+ ++ R+VG A ++ ++ +A+EA ++G+++ VV + +E E IK++++I+
Sbjct: 154 GTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVE-EAIKFAQKII 208
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 9/209 (4%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+G+ + ++ P N+ P ++L + D +V +++ G+G +AF SGG L
Sbjct: 28 DGVLTVVLDSPGL-NSVGPQMHRDLADIWPVIDRDPAVRAVLVRGEG-KAFSSGGSFDL- 84
Query: 139 TRDGYADYENFGRLNVL----DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAAD 194
+ DY+ GR+ ++ DL + PV++ + G AVG G V+ ++ D+++A
Sbjct: 85 IDETIGDYQ--GRIRIMREARDLVHNMINCDTPVVSAIRGPAVGAGLVVALLADISVAGR 142
Query: 195 NAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLE 254
A K+G + + LVG KA+ EEAE++GLV+ V +
Sbjct: 143 TAKLIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLLGEEAERIGLVSLCVDDD 202
Query: 255 KLEQETIKWSREILRNSPTAIRVLKSALN 283
+ + ++ + + AI+ K +LN
Sbjct: 203 DVLSTAAGIAGKLAQGAQHAIQWTKRSLN 231
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 93 NAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRL 152
NA P ++E+ A D +V I++ G FC+G D G++ + L
Sbjct: 27 NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGN-FCAGADI-----HGFSAFTP--GL 78
Query: 153 NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGY 212
+ L +I+R KPV+A + G A+GGG L + C IA A G +G
Sbjct: 79 ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGAR 138
Query: 213 GSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREIL 268
G+ ++ R+VG A ++ ++ +A+EA ++G+++ VV + +E E IK++++I+
Sbjct: 139 GTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVE-EAIKFAQKII 193
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 93 NAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRL 152
NA P ++E+ A D +V I++ G FC+G D G++ + L
Sbjct: 42 NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGN-FCAGADI-----HGFSAFTP--GL 93
Query: 153 NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGY 212
+ L +I+R KPV+A + G A+GGG L + C IA A G +G
Sbjct: 94 ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGAR 153
Query: 213 GSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREIL 268
G+ ++ R+VG A ++ ++ +A+EA ++G+++ VV + +E E IK++++I+
Sbjct: 154 GTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVE-EAIKFAQKII 208
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA-LRTRDG 142
IT+NRPD N+ L R + DD + ++TG G AF +GGD L+
Sbjct: 41 ITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAG-RAFSAGGDFGYLKELSA 99
Query: 143 YADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTG 202
AD + ++ + + R PV+A V G AVG G L + D+ A+NA
Sbjct: 100 DADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPH 159
Query: 203 PKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIK 262
+VG A G + A+E +A+ A ++GL N V + E I
Sbjct: 160 VQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVA--DDPVAEAIA 217
Query: 263 WSREILRNSPTAIRVLKSALN 283
+++IL A+ K LN
Sbjct: 218 CAKKILELPQQAVESTKRVLN 238
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA-LRT 139
+ I +NRP +RNA + L D D + +++ G G + F +G D + LR
Sbjct: 26 VLTIGLNRPKKRNALNDGLMAALKDCLTDIPDQ--IRAVVIHGIG-DHFSAGLDLSELRE 82
Query: 140 RD---GYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
RD G + + R V D ++Q R+P VIA + G +GGG L + +A +A
Sbjct: 83 RDATEGLVHSQTWHR--VFD-KIQYCRVP--VIAALKGAVIGGGLELACAAHIRVAEASA 137
Query: 197 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKL 256
+ G F G GS + RL+G + +M R Y+A E G ++
Sbjct: 138 YYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIENGSA 197
Query: 257 EQETIKWSREILRNSP-TAIRVLKS 280
+ ++ + +N+P T VL++
Sbjct: 198 YDKALELGNRVAQNAPLTNFAVLQA 222
>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein
pdb|2GTR|B Chain B, Human Chromodomain Y-Like Protein
pdb|2GTR|C Chain C, Human Chromodomain Y-Like Protein
Length = 261
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 21/268 (7%)
Query: 68 FTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
+ DI+ K +G I ++ + N+ P ++E+ A + A D S +++L+ G+
Sbjct: 4 YRDIVVRKQ--DGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGS 60
Query: 127 EAFCSGGDQAL--------RTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVG 178
FC G D R R+ E N ++ +Q + KP+I V G A+G
Sbjct: 61 -VFCCGLDFIYFIRRLTDDRKRESTKMAEAIR--NFVNTFIQFK---KPIIVAVNGPAIG 114
Query: 179 GGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTA 238
G + +CD+ A + A F G G + + +++G A EM R TA
Sbjct: 115 LGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTA 174
Query: 239 EEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGD 298
+EA GLV+ V QE + +E+ +P + K AL + Q +
Sbjct: 175 QEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESK-ALVRCNMKMELEQANERE 233
Query: 299 ATLI--FYGTEEGSEGKTAFVERRRPDF 324
++ +G+ +G + +++R+ +F
Sbjct: 234 CEVLKKIWGSAQGMDSMLKYLQRKIDEF 261
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
+ YE V + +A+IT NRP++ NA T EL A D V VI+++G+G E FC
Sbjct: 37 MTYE--VTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRG-EGFC 93
Query: 131 SGGD--------------------------QAL-----RTRDGYADYENFGRLNVLDLQV 159
+G D QAL D DY+ R +
Sbjct: 94 AGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRF--VRGFA 151
Query: 160 QIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSR 219
+ KP + + GY V GG + + D IAA +A G +V A + + +
Sbjct: 152 SLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPA---AGLWAH 208
Query: 220 LVGPKKAREMWFLARFYTAEEAEKMGL 246
+G ++A+ + F T +A + GL
Sbjct: 209 RLGDQRAKRLLFTGDCITGAQAAEWGL 235
>pdb|3GKB|A Chain A, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|B Chain B, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|C Chain C, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 11/220 (5%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+A+I ++ P N ++EL DDSSV VI+ + E F + D +R
Sbjct: 18 GVARIILDNPPV-NVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVD--MRI 74
Query: 140 RDGYADYENFGRLNVLDLQV------QIRRLPKPVIAMVAGYAVGGG-HVLHMVCDLTIA 192
+ + D+ V IR P+ I +AG A GGG + A
Sbjct: 75 GEKMDALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAA 134
Query: 193 ADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVP 252
A+ A GQ +G G G+ + VG +A E+ A + AE A G +N +P
Sbjct: 135 AETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGWINRALP 194
Query: 253 LEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGL 292
++L++ + +R I I K +L A DD GL
Sbjct: 195 ADELDEYVDRVARNIAALPDGVIEAAKRSLPA-DDLKEGL 233
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 71 IIYE------KAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSV-GVIILT 122
+IYE A+ GI ++ + + + N F T+ EL +A + + D+SV GVI+ +
Sbjct: 1 MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS 60
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENF---------GRLNVLDLQVQIRRLPKPVIAMVA 173
GK + F G D ENF G L + L P +A +
Sbjct: 61 GK--DVFIVGADITEFV-------ENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAIN 111
Query: 174 GYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSI-MSRLVGPKKAREMWFL 232
G A+GGG + + D + AD+A G K+G + G+G ++ + RL+G A E
Sbjct: 112 GIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIY-PGFGGTVRLPRLIGVDNAVEWIAS 170
Query: 233 ARFYTAEEAEKMGLVNTVVPLEKL 256
+ AE+A K+ V+ VV +KL
Sbjct: 171 GKENRAEDALKVSAVDAVVTADKL 194
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-- 134
+ +G+A +T+ RPD+ NA +L + +V ++L G+G FCSGGD
Sbjct: 23 ITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEG-RGFCSGGDVD 81
Query: 135 ---QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTI 191
A + D A +F R ++ +R P PVIA + G A G G VL + D +
Sbjct: 82 EIIGATLSXD-TARLLDFNRXTGQVVRA-VRECPFPVIAALHGVAAGAGAVLALAADFRV 139
Query: 192 AADNAIFGQTGPKVGSFDAGYGSS-IMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTV 250
A + F +VG G++ ++ R+VG A + L A EAE++GL++ +
Sbjct: 140 ADPSTRFAFLFTRVGLSGGDXGAAYLLPRVVGLGHATRLLXLGDTVRAPEAERIGLISEL 199
Query: 251 VPLEKLEQETIKWSREILRNSPTAIRVLKSALNA-VDDGHAGLQTLGGDATLIFYGTEEG 309
+ ++ +R + A K+ L A +D A L + E+
Sbjct: 200 TEEGRADEAARTLARRLADGPALAHAQTKALLTAELDXPLAAAVELDASTQALLXTGEDY 259
Query: 310 SEGKTAFVERRRPDF 324
+E AF E+R P +
Sbjct: 260 AEFHAAFTEKRPPKW 274
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-----QALR 138
IT+NRP NA + ++++ D +II+ G G +AFC+GGD +A +
Sbjct: 19 ITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK 78
Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
+ A F R L + KP +A++ G GGG L + +A + +F
Sbjct: 79 AKQKIAPV--FFR-EEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRVATEKCLF 135
Query: 199 GQTGPKVGSFDAGYGSSIMSRLVG 222
+G F G + RL G
Sbjct: 136 AXPETAIGLFPDVGGGYFLPRLQG 159
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
+++E+ E + IT++ P++ N F + A A D SV +++ G +F
Sbjct: 1 MVFEENSDE-VRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFS 59
Query: 131 SGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDL 189
+GGD ++ D E + V+DL + + KP IA V GYA+G G ++ D
Sbjct: 60 AGGDFNEVKQLSRSEDIEEWID-RVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQ 118
Query: 190 TIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNT 249
+ A A F K G G++I+ G +E+ + + A LVN
Sbjct: 119 RLMASTANFVMPELKHG-IGCSVGAAILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQ 177
Query: 250 VVPLEKLEQETIKWSREILRNSPTAIRVLKSALN 283
VV L I + + +A K A+N
Sbjct: 178 VVESSALLDAAITQAHVMASYPASAFINTKRAVN 211
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG-KGTEAFCSGGDQA 136
G+G+A IT+ P N+ + L + +A + V I++TG KG F G D +
Sbjct: 15 GDGVAVITLINPPV-NSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGR--FSGGFDIS 71
Query: 137 L--RTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAAD 194
+ G G +++ + + KP +A + G A+GGG L M C I+A
Sbjct: 72 GFGEMQKGNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAP 131
Query: 195 NAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLE 254
A G ++G G+ + RLVG KA EM ++ AEE +GL++ VVP
Sbjct: 132 AAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPA 191
Query: 255 KLEQETIKWSREIL-RNSPTAIRVLKS 280
+L +W+ +I+ R P V K+
Sbjct: 192 ELVTTARRWALDIVGRRKPWVSSVSKT 218
>pdb|1SG4|A Chain A, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|B Chain B, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|C Chain C, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
Length = 260
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
++ E G G+A + P N+ + EL+ + +D S +ILT F
Sbjct: 5 VLVEPDAGAGVAVMKFKNPPV-NSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFS 63
Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLT 190
+G D A Y + + V +L +++ + +++ + G GG ++ + CD
Sbjct: 64 AGLDLTEMCGRSPAHYAGYWK-AVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYR 122
Query: 191 IAADNA--IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVN 248
I ADN G ++G + + +G + A L + EA ++G+V+
Sbjct: 123 ILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVD 182
Query: 249 TVVPLEKLEQETI 261
VVP E+++ +
Sbjct: 183 QVVPEEQVQSTAL 195
>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|B Chain B, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|C Chain C, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 160 QIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA-DNAIFGQTGPKVGSFDAGYGSSIMS 218
++ +LP IA + G A G G + CD+ A+ +NAI GQ +G+ ++
Sbjct: 98 KLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLT 157
Query: 219 RLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVL 278
RL+G +A E + + A+ AE+ G VN VP +L++ + + A+
Sbjct: 158 RLLGRGRALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALIAA 217
Query: 279 KSALNAV 285
KSA+NA+
Sbjct: 218 KSAINAI 224
>pdb|1WZ8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|C Chain C, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|D Chain D, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|E Chain E, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|F Chain F, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
Length = 264
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 5/247 (2%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+ +IT R ++ NA P + L R + D V ++L G+G F +GG L
Sbjct: 20 GVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGG-VFSAGGSFGL-I 76
Query: 140 RDGYADYENFGRL--NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
+ A +E R+ DL + P+PV+A V AVG G L + D+ +
Sbjct: 77 EEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTR 136
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLE 257
++G + + LVG KA+ L T EEAE++GLV V EK+
Sbjct: 137 LLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVY 196
Query: 258 QETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFV 317
++ ++ + + + A+ K ALN L + + +E EG A
Sbjct: 197 EKALEVAERLAQGPKEALHHTKHALNHWYRSFLPHFELSLALEFLGFSGKELEEGLKALK 256
Query: 318 ERRRPDF 324
E+R P+F
Sbjct: 257 EKRPPEF 263
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA 128
+D++ K G +IT++RP NA V+E+ A D V ++++ +G A
Sbjct: 24 SDVLIRKVRRAG--RITLSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRA 81
Query: 129 FCSGGDQA-LRTRDGYADY---ENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGG 180
FC+GGD A L R D+ ++F R+ +I PKP++++ G+ GGG
Sbjct: 82 FCAGGDIAELHGRGVAGDHAFGQDFWRVEY-RXNDRIAAFPKPIVSLXQGFTXGGG 136
>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
Length = 263
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA-----FCSGGD 134
GI ++ ++ F T +E AF D D V+ILTG G F S GD
Sbjct: 33 GILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGD 92
Query: 135 QALRTRDGYADYENFGRL--NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLH----MVCD 188
R+ Y ++ N+LD++V PVI+ AV G +LH + D
Sbjct: 93 -VTNPREWDKTYWEGKKVLQNLLDIEV-------PVIS-----AVNGAALLHSEYILTTD 139
Query: 189 LTIAADNAIFGQTGPKVGS-FDAGYGSSIMSRL-VGPKKAREMWFLARFYTAEEAEKMGL 246
+ +A++N +F Q P + + G G I+ L +G + R F TA++A ++ +
Sbjct: 140 IILASENTVF-QDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNV 198
Query: 247 VNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSAL 282
V+ V+P KL + + +R + + +R + AL
Sbjct: 199 VHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVAL 234
>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|B Chain B, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|C Chain C, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|E Chain E, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|F Chain F, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|G Chain G, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|H Chain H, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|I Chain I, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|J Chain J, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|K Chain K, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|L Chain L, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5S|A Chain A, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
pdb|2J5S|B Chain B, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
Length = 263
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA-----FCSGGD 134
GI ++ ++ F T +E AF D D V+ILTG G F S GD
Sbjct: 33 GILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGD 92
Query: 135 QALRTRDGYADYENFGRL--NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLH----MVCD 188
R+ Y ++ N+LD++V PVI+ AV G +LH + D
Sbjct: 93 -VTNPREWDKTYWEGKKVLQNLLDIEV-------PVIS-----AVNGAALLHSEYILTTD 139
Query: 189 LTIAADNAIFGQTGPKVGSFDAGYGSSIMSRL-VGPKKAREMWFLARFYTAEEAEKMGLV 247
+ +A++N +F G G I+ L +G + R F TA++A ++ +V
Sbjct: 140 IILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVV 199
Query: 248 NTVVPLEKLEQETIKWSREILRNSPTAIRVLKSAL 282
+ V+P KL + + +R + + +R + AL
Sbjct: 200 HEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVAL 234
>pdb|3ISA|A Chain A, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|B Chain B, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|C Chain C, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|D Chain D, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|E Chain E, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|F Chain F, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
Length = 254
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
T++RP++RNA V+ LI DA V +++ G G F +G D +
Sbjct: 20 FTLSRPEKRNALSAELVEALIDGV-DAAHREQVPLLVFAGAGRN-FSAGFD--------F 69
Query: 144 ADYENFGRLNVLDLQVQIRRL-------PKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
DYE ++L V+I L P +A+ G G G L C A
Sbjct: 70 TDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEA 129
Query: 197 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVN 248
F G K G G+ +VG +A + AR + A+EA ++G V
Sbjct: 130 GFRMPGLKFGLV---LGTRRFRDIVGADQALSILGSARAFDADEARRIGFVR 178
>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa
Length = 261
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
++ EK GIA + P N+ + E + + +D S+ +ILT + F
Sbjct: 6 VLVEKEGEAGIAVMKFKNPPV-NSLSLEFLTEFVISLEKLENDKSIRGVILTSERPGIFS 64
Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLT 190
+G D A Y + + V +L +++ +I+ + G + GG ++ + CD
Sbjct: 65 AGLDLMEMYGRNPAHYAEYWK-AVQELWLRLYLSNLTLISAINGASPAGGCLMALTCDYR 123
Query: 191 IAADNAIF--GQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVN 248
I ADN+ + G +G + +G + A L + EA K+GLV+
Sbjct: 124 IMADNSKYTIGLNESLLGIVAPFWLKDNYVNTIGHRAAERALQLGTLFPPAEALKVGLVD 183
Query: 249 TVVP 252
VVP
Sbjct: 184 EVVP 187
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 3/183 (1%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+ +T+NRP N+ V + +D SV ++LTG G C+GGD
Sbjct: 18 GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIY 77
Query: 140 RDGYADYENFGR--LNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAI 197
AD R + L I R PKP ++++ G +GGG + ++ + D
Sbjct: 78 HSAKADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTK 137
Query: 198 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLE 257
+G G+ ++SR G K ++ +A MG + VP +K++
Sbjct: 138 MAMPEVGIGFIPDVGGTYLLSRAPG-KLGLHAALTGAPFSGADAIVMGFADHYVPHDKID 196
Query: 258 QET 260
+ T
Sbjct: 197 EFT 199
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 169 IAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKARE 228
IA+V G A+GGG + C IA + + G F S M + + A++
Sbjct: 144 IALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQK 203
Query: 229 MWFLARFYTAEEAEKMGLVNTVVP 252
+ Y+AE+ MGLV+ VVP
Sbjct: 204 IMLEGNLYSAEQLLGMGLVDRVVP 227
>pdb|3LAO|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
Length = 258
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 159 VQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMS 218
VQ RR KP++ V G G L + D+ +AA F G G +
Sbjct: 100 VQPRR-SKPLVVAVQGTCWTAGIELXLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFP 158
Query: 219 RLVGPKKAREMWFLARFYTAEEAEKMGLVNTVV-PLEKLEQETIKWSREILRNSPTAIR- 276
R G A + A+EA + L+ VV P E+L + ++++ I R +P A+R
Sbjct: 159 RAAGWTDAXRYILTGDEFDADEALRXRLLTEVVEPGEELAR-ALEYAERIARAAPLAVRA 217
Query: 277 VLKSALNAVDDGHAGLQTLGGDATLIFYGTEEGSEGKTAFV 317
L+SA D+G + ++ G+E+ EG A V
Sbjct: 218 ALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAXV 258
>pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|B Chain B, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|C Chain C, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|D Chain D, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|E Chain E, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|F Chain F, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|G Chain G, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|H Chain H, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|I Chain I, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|J Chain J, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|K Chain K, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|L Chain L, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
Length = 257
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+ +T++ + + EL F+D D V+ILTG G +FC+ D
Sbjct: 25 GVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGP-SFCNEIDFTSFN 83
Query: 140 RDGYADYENF----GRL--NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA 193
D++ RL N+L ++V PVIA V G V + ++ D+ +AA
Sbjct: 84 LGTPHDWDEIIFEGQRLLNNLLSIEV-------PVIAAVNG-PVTNAPEIPVMSDIVLAA 135
Query: 194 DNAIFGQTGPKVGS-FDAGYGSSIM-SRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVV 251
++A F Q GP S G G+ ++ ++G + R + A A G VN V+
Sbjct: 136 ESATF-QDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVL 194
Query: 252 PLEKLEQETIKWSREILR 269
EQE + + E+ R
Sbjct: 195 S----EQELLPRAWELAR 208
>pdb|1O8U|A Chain A, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|B Chain B, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|C Chain C, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|D Chain D, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|E Chain E, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|F Chain F, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
Length = 257
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
G+ +T++ + + EL F+D D V+ILTG G +FC+ D
Sbjct: 25 GVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGP-SFCNEIDFTSFN 83
Query: 140 RDGYADYENF----GRL--NVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA 193
D++ RL N+L ++V PVIA V G V + ++ D+ +AA
Sbjct: 84 LGTPHDWDEIIFEGQRLLNNLLSIEV-------PVIAAVNG-PVTNHPEIPVMSDIVLAA 135
Query: 194 DNAIFGQTGPKVGS-FDAGYGSSIM-SRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVV 251
++A F Q GP S G G+ ++ ++G + R + A A G VN V+
Sbjct: 136 ESATF-QDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVL 194
Query: 252 PLEKLEQETIKWSREILR 269
EQE + + E+ R
Sbjct: 195 S----EQELLPRAWELAR 208
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
pdb|3JU1|B Chain B, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
Length = 407
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 76 AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
A G+ + +T+N NA V+ N + D + ++L G G +AFC+GGD
Sbjct: 47 ASGKLVGVVTLNVEKALNALDLDXVRAXTVQLNLWKKDPLIACVVLDGSGEKAFCAGGD 105
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 26/228 (11%)
Query: 91 RRNAFRPHTVKELIRAFNDA-RDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF 149
+ NA P + L A ++A RDD VG +++TG G F G D + T +
Sbjct: 24 KVNALGPAXQQALNAAIDNADRDD--VGALVITGNG-RVFSGGFDLKILTSGEVQPAIDX 80
Query: 150 GRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCD-------LTIAADNAIFGQTG 202
R +L ++ PKPV+ G+A+ G L D I A+ G T
Sbjct: 81 LR-GGFELAYRLLSYPKPVVXACTGHAIAXGAFLLSCGDHRVAAHAYNIQANEVAIGXTI 139
Query: 203 PKVGSFDAGYGSSIMSRLVGPKKA-REMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETI 261
P Y + + +L + A ++ LA+ + E A G ++ + E +
Sbjct: 140 P--------YAALEIXKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAE 191
Query: 262 KWSREIL-----RNSPTAIRVLKSALNAVDDGHAGLQTLGGDATLIFY 304
+ +RE ++ T +R AL A+ G G+ G A +++
Sbjct: 192 EAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGLAENLYF 239
>pdb|2W3P|A Chain A, Boxc Crystal Structure
pdb|2W3P|B Chain B, Boxc Crystal Structure
Length = 556
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 8/151 (5%)
Query: 116 VGVIILTGKGTEAFCSGGD---QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
V ++LT FCSG + L T ++ F L+ R +A V
Sbjct: 77 VRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAV 136
Query: 173 AGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKARE---- 228
G GGG+ L + CD D+ + P+V G+ ++R+ +K R
Sbjct: 137 NGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRAD 196
Query: 229 -MWFLARFYTAEEAEKMGLVNTVVPLEKLEQ 258
+ E A+ LV+ VV + +Q
Sbjct: 197 IFCTVVEGVRGERAKAWRLVDEVVKPNQFDQ 227
>pdb|3OT6|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE
FAMILY PROTEIN From Psudomonas Syringae
Length = 232
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 38/227 (16%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGG-DQAL 137
+G+A +T+N + NA P ++I AFN A D + I+ G SGG D +
Sbjct: 14 DGVATLTLNN-GKVNAISP----DVIIAFNAALDQAEKDRAIVIVTGQPGILSGGYDLKV 68
Query: 138 RTRDGYADYENFGRLNVLDLQVQIRRL---PKPVIAMVAGYAVGGGHVLHMVCDLTIAAD 194
T A + + L RR P P+I G+AV G L + D I
Sbjct: 69 XTSSAEAAINLVAQGSTL-----ARRXLSHPFPIIVACPGHAVAKGAFLLLSADYRI--- 120
Query: 195 NAIFGQTGP-KVGSFDAGYGSSIMSRLVGPKKAREMWFLARF---------YTAEEAEKM 244
G GP +G + G + G + AR+ + F + E A
Sbjct: 121 ----GVAGPFSIGLNEVQIGXT--XHHAGIELARDRLRKSAFNRSVINAEXFDPEGAXAA 174
Query: 245 GLVNTVVPLEKLEQETIKWSREILR-----NSPTAIRVLKSALNAVD 286
G ++ VV +E+L+ + + ++ + + T ++V K L+ +D
Sbjct: 175 GFLDKVVSVEELQGAALAVAAQLKKINXNAHKKTKLKVRKGLLDTLD 221
>pdb|3U9R|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc), Beta Subunit
pdb|3U9S|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|D Chain D, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|F Chain F, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|H Chain H, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|J Chain J, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|L Chain L, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9T|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Free Enzyme
Length = 555
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 95 FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNV 154
+ P TVK+ +RA A ++ + ++ SGG R + + D E+FGR+
Sbjct: 137 YYPLTVKKHLRAQAIALENRLPCIYLVD--------SGGANLPRQDEVFPDREHFGRIFF 188
Query: 155 LDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTI 191
+ R +P+ IA+V G GG + + D T+
Sbjct: 189 NQANMSARGIPQ--IAVVMGSCTAGGAYVPAMSDETV 223
>pdb|3R6H|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase (Echa3) From
Mycobacterium Marinum
Length = 233
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 91 RRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG 150
+ N P T+++ + DA D +VG +++ G F G D + T +
Sbjct: 24 KVNVLGP-TMQQALNEAIDAADRDNVGALVIAGN-HRVFSGGFDLKVLTSGEAKPAIDML 81
Query: 151 RLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDA 210
R +L ++ PKPV+ G+A+ G L D +AA +G
Sbjct: 82 R-GGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIP 140
Query: 211 GYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREIL-- 268
++ + P ++ LA+ + E A G ++ + E + + +RE
Sbjct: 141 YAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGL 200
Query: 269 ---RNSPTAIRVLKSALNAVDDGHAGLQT 294
++ T +R AL A+ G G++
Sbjct: 201 NQQAHNATKLRARAEALKAIRAGIDGIEA 229
>pdb|3LVQ|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In
Trans State
pdb|3LVR|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In
Trans State Soaked With Calcium
Length = 497
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 406 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 446
>pdb|2W83|A Chain A, Crystal Structure Of The Arf6 Gtpase In Complex With A
Specific Effector, Jip4
pdb|2W83|B Chain B, Crystal Structure Of The Arf6 Gtpase In Complex With A
Specific Effector, Jip4
pdb|2W83|E Chain E, Crystal Structure Of The Arf6 Gtpase In Complex With A
Specific Effector, Jip4
Length = 165
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 87 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 127
>pdb|3VHX|A Chain A, The Crystal Structure Of Arf6-Mklp1 (Mitotic Kinesin-Like
Protein 1) Complex
pdb|3VHX|C Chain C, The Crystal Structure Of Arf6-Mklp1 (Mitotic Kinesin-Like
Protein 1) Complex
pdb|3VHX|E Chain E, The Crystal Structure Of Arf6-Mklp1 (Mitotic Kinesin-Like
Protein 1) Complex
pdb|3VHX|G Chain G, The Crystal Structure Of Arf6-Mklp1 (Mitotic Kinesin-Like
Protein 1) Complex
Length = 172
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 86 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 126
>pdb|3N5C|A Chain A, Crystal Structure Of Arf6delta13 Complexed With Gdp
pdb|3N5C|B Chain B, Crystal Structure Of Arf6delta13 Complexed With Gdp
Length = 162
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 84 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 124
>pdb|2QX5|A Chain A, Structure Of Nucleoporin Nic96
pdb|2QX5|B Chain B, Structure Of Nucleoporin Nic96
Length = 661
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 15 VANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDV----VWRIACDESGTEFTD 70
+AN + ++SS + G NA + +S+ +I + S D+ V + ++ ++TD
Sbjct: 56 IANEFISILSSAN-----GTRNAQLLESW-KILESMKSKDINIVEVGKQYLEQQFLQYTD 109
Query: 71 IIYEKAVGEGIA 82
+Y+K + EG+A
Sbjct: 110 NLYKKNMNEGLA 121
>pdb|2RFO|A Chain A, Crystral Structure Of The Nucleoporin Nic96
pdb|2RFO|B Chain B, Crystral Structure Of The Nucleoporin Nic96
Length = 651
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 15 VANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDV----VWRIACDESGTEFTD 70
+AN + ++SS + G NA + +S+ +I + S D+ V + ++ ++TD
Sbjct: 46 IANEFISILSSAN-----GTRNAQLLESW-KILESMKSKDINIVEVGKQYLEQQFLQYTD 99
Query: 71 IIYEKAVGEGIA 82
+Y+K + EG+A
Sbjct: 100 NLYKKNMNEGLA 111
>pdb|4FME|C Chain C, Espg-Rab1-Arf6 Complex
pdb|4FME|F Chain F, Espg-Rab1-Arf6 Complex
Length = 160
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 84 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 124
>pdb|2A5G|A Chain A, Cholera Toxin A1 Subunit Bound To Arf6(Q67l)
Length = 175
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 97 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 137
>pdb|2A5D|A Chain A, Structural Basis For The Activation Of Cholera Toxin By
Human Arf6-Gtp
pdb|2A5F|A Chain A, Cholera Toxin A1 Subunit Bound To Its Substrate, Nad+, And
Its Human Protein Activator, Arf6
pdb|2J5X|A Chain A, Structure Of The Small G Protein Arf6 In Complex With
Gtpgammas
pdb|2J5X|B Chain B, Structure Of The Small G Protein Arf6 In Complex With
Gtpgammas
Length = 175
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 97 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 137
>pdb|1E0S|A Chain A, Small G Protein Arf6-Gdp
Length = 174
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 62 DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKE 102
DE+ E II ++ + + I I N+ D +A +PH ++E
Sbjct: 96 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 136
>pdb|3PM6|A Chain A, Crystal Structure Of A Putative Fructose-1,6-Biphosphate
Aldolase From Coccidioides Immitis Solved By Combined
Sad Mr
pdb|3PM6|B Chain B, Crystal Structure Of A Putative Fructose-1,6-Biphosphate
Aldolase From Coccidioides Immitis Solved By Combined
Sad Mr
Length = 306
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 68 FTDIIYEKAVGEGIAKITINR 88
FT I+EK + G+AK+ +NR
Sbjct: 232 FTKEIFEKCIERGVAKVNVNR 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,107,905
Number of Sequences: 62578
Number of extensions: 429355
Number of successful extensions: 1290
Number of sequences better than 100.0: 128
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1035
Number of HSP's gapped (non-prelim): 129
length of query: 331
length of database: 14,973,337
effective HSP length: 99
effective length of query: 232
effective length of database: 8,778,115
effective search space: 2036522680
effective search space used: 2036522680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)