Query 020094
Match_columns 331
No_of_seqs 178 out of 1483
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:42:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020094.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020094hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 1.3E-17 4.4E-22 136.5 15.9 109 177-287 17-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.7 2.3E-17 8E-22 138.1 14.5 116 179-296 3-118 (150)
3 4ga2_A E3 SUMO-protein ligase 99.7 2.6E-18 8.9E-23 143.9 7.2 117 175-293 33-150 (150)
4 2pl2_A Hypothetical conserved 99.7 6.3E-17 2.1E-21 142.5 16.0 123 177-301 9-142 (217)
5 4gyw_A UDP-N-acetylglucosamine 99.7 4.1E-17 1.4E-21 171.5 15.4 128 172-301 8-135 (723)
6 2pl2_A Hypothetical conserved 99.7 2.2E-16 7.4E-21 139.1 16.2 127 172-301 38-175 (217)
7 3vtx_A MAMA; tetratricopeptide 99.7 5.9E-16 2E-20 130.1 17.6 125 175-301 7-165 (184)
8 4gyw_A UDP-N-acetylglucosamine 99.7 4E-16 1.4E-20 164.0 17.8 128 172-301 42-169 (723)
9 3vtx_A MAMA; tetratricopeptide 99.7 2.3E-15 7.8E-20 126.5 18.3 104 173-278 73-176 (184)
10 3upv_A Heat shock protein STI1 99.7 1.4E-15 4.9E-20 121.0 15.6 113 176-290 7-125 (126)
11 2vyi_A SGTA protein; chaperone 99.7 2.7E-15 9.4E-20 116.1 16.8 117 175-293 14-130 (131)
12 3gyz_A Chaperone protein IPGC; 99.7 4E-17 1.4E-21 139.4 6.6 108 192-301 21-128 (151)
13 2lni_A Stress-induced-phosphop 99.7 1.3E-15 4.4E-20 119.3 14.1 119 172-292 15-133 (133)
14 4i17_A Hypothetical protein; T 99.7 2.5E-15 8.6E-20 130.7 17.4 126 174-301 8-141 (228)
15 3sz7_A HSC70 cochaperone (SGT) 99.7 1.2E-15 4.1E-20 127.3 14.4 114 174-289 12-125 (164)
16 3urz_A Uncharacterized protein 99.7 8.5E-16 2.9E-20 134.4 13.9 115 177-293 8-138 (208)
17 1a17_A Serine/threonine protei 99.7 3.8E-15 1.3E-19 121.2 16.3 124 176-301 16-141 (166)
18 2fo7_A Synthetic consensus TPR 99.7 6.5E-15 2.2E-19 113.7 16.4 124 177-302 5-128 (136)
19 3gyz_A Chaperone protein IPGC; 99.6 2.5E-15 8.5E-20 128.2 15.1 104 172-277 35-138 (151)
20 2h6f_A Protein farnesyltransfe 99.6 1.5E-15 5.3E-20 147.8 15.6 127 173-301 97-224 (382)
21 3as5_A MAMA; tetratricopeptide 99.6 1.3E-14 4.4E-19 118.5 18.1 128 173-302 42-169 (186)
22 1na0_A Designed protein CTPR3; 99.6 1.8E-14 6.1E-19 110.6 16.9 115 175-291 11-125 (125)
23 2xcb_A PCRH, regulatory protei 99.6 2.9E-15 9.8E-20 123.0 12.8 112 175-288 20-131 (142)
24 1p5q_A FKBP52, FK506-binding p 99.6 4.5E-15 1.5E-19 140.3 15.6 122 175-298 149-285 (336)
25 2vgx_A Chaperone SYCD; alterna 99.6 1E-15 3.6E-20 128.2 9.8 103 175-279 23-125 (148)
26 2vgx_A Chaperone SYCD; alterna 99.6 4E-15 1.4E-19 124.6 13.1 108 193-302 7-114 (148)
27 1elw_A TPR1-domain of HOP; HOP 99.6 1.9E-14 6.5E-19 109.7 15.4 111 176-288 7-117 (118)
28 4i17_A Hypothetical protein; T 99.6 3.8E-15 1.3E-19 129.6 12.8 118 174-293 43-169 (228)
29 4gco_A Protein STI-1; structur 99.6 4.7E-15 1.6E-19 121.1 12.1 102 198-301 4-105 (126)
30 2q7f_A YRRB protein; TPR, prot 99.6 3.5E-14 1.2E-18 122.2 18.1 127 173-301 57-183 (243)
31 2q7f_A YRRB protein; TPR, prot 99.6 2.6E-14 9E-19 122.9 17.2 127 173-301 91-217 (243)
32 3rkv_A Putative peptidylprolyl 99.6 3.2E-15 1.1E-19 124.5 10.5 114 177-292 15-147 (162)
33 3uq3_A Heat shock protein STI1 99.6 2.2E-14 7.4E-19 123.9 15.9 127 174-302 80-232 (258)
34 3q49_B STIP1 homology and U bo 99.6 9.7E-15 3.3E-19 116.3 12.7 116 173-290 9-129 (137)
35 4eqf_A PEX5-related protein; a 99.6 1.3E-14 4.5E-19 133.9 15.4 130 174-305 178-309 (365)
36 2fbn_A 70 kDa peptidylprolyl i 99.6 1.4E-14 4.8E-19 124.4 14.0 120 176-297 41-176 (198)
37 3as5_A MAMA; tetratricopeptide 99.6 1.9E-14 6.5E-19 117.5 14.1 126 175-302 10-135 (186)
38 1w3b_A UDP-N-acetylglucosamine 99.6 1.1E-14 3.7E-19 135.9 14.2 127 173-301 237-363 (388)
39 4gcn_A Protein STI-1; structur 99.6 2.2E-14 7.6E-19 116.8 14.2 105 177-284 12-123 (127)
40 2e2e_A Formate-dependent nitri 99.6 8.8E-15 3E-19 122.7 12.1 116 185-301 22-139 (177)
41 2xcb_A PCRH, regulatory protei 99.6 4.9E-15 1.7E-19 121.6 10.3 106 194-301 5-110 (142)
42 1hxi_A PEX5, peroxisome target 99.6 1.2E-14 3.9E-19 117.8 11.7 101 176-278 20-120 (121)
43 2h6f_A Protein farnesyltransfe 99.6 1.1E-14 3.8E-19 141.7 13.6 125 171-297 129-255 (382)
44 1fch_A Peroxisomal targeting s 99.6 3.6E-14 1.2E-18 129.9 15.9 126 174-301 218-354 (368)
45 2dba_A Smooth muscle cell asso 99.6 1.1E-13 3.9E-18 110.3 17.0 116 171-288 26-144 (148)
46 2ho1_A Type 4 fimbrial biogene 99.6 6.6E-14 2.3E-18 122.0 16.4 126 174-301 72-199 (252)
47 2vq2_A PILW, putative fimbrial 99.6 7.7E-14 2.6E-18 118.0 16.4 122 178-301 13-137 (225)
48 3u4t_A TPR repeat-containing p 99.6 1.5E-14 5.2E-19 127.2 12.3 124 175-301 5-132 (272)
49 2ho1_A Type 4 fimbrial biogene 99.6 6.1E-14 2.1E-18 122.3 16.0 128 174-303 38-167 (252)
50 1hh8_A P67PHOX, NCF-2, neutrop 99.6 5.2E-14 1.8E-18 120.2 15.1 122 176-302 9-146 (213)
51 2vq2_A PILW, putative fimbrial 99.6 8.1E-14 2.8E-18 117.8 16.0 126 175-302 44-172 (225)
52 1w3b_A UDP-N-acetylglucosamine 99.6 7.1E-14 2.4E-18 130.4 17.1 126 174-301 204-329 (388)
53 3cv0_A Peroxisome targeting si 99.6 1.1E-13 3.7E-18 123.7 16.7 128 172-301 171-310 (327)
54 2xev_A YBGF; tetratricopeptide 99.6 1.9E-13 6.6E-18 107.7 16.3 114 176-291 5-124 (129)
55 2vsy_A XCC0866; transferase, g 99.6 7E-14 2.4E-18 139.3 16.9 130 172-303 22-154 (568)
56 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 2.8E-14 9.5E-19 140.7 13.6 122 176-299 271-407 (457)
57 3hym_B Cell division cycle pro 99.5 1.1E-13 3.7E-18 123.8 16.1 126 174-301 160-294 (330)
58 2pzi_A Probable serine/threoni 99.5 2.1E-14 7.3E-19 148.4 13.1 128 171-301 431-558 (681)
59 4eqf_A PEX5-related protein; a 99.5 1.2E-13 4.1E-18 127.5 16.6 125 175-301 101-271 (365)
60 3uq3_A Heat shock protein STI1 99.5 6.6E-14 2.3E-18 120.8 13.7 129 173-303 38-199 (258)
61 1elr_A TPR2A-domain of HOP; HO 99.5 9.2E-14 3.1E-18 107.7 13.2 114 176-292 7-127 (131)
62 4abn_A Tetratricopeptide repea 99.5 2.3E-14 7.9E-19 141.5 12.2 124 175-301 139-282 (474)
63 3hym_B Cell division cycle pro 99.5 1.2E-13 4.2E-18 123.5 15.6 131 173-305 90-221 (330)
64 1xnf_A Lipoprotein NLPI; TPR, 99.5 2.4E-13 8.4E-18 119.0 17.0 125 174-301 44-168 (275)
65 4abn_A Tetratricopeptide repea 99.5 3.8E-14 1.3E-18 140.0 12.9 128 172-302 101-246 (474)
66 3k9i_A BH0479 protein; putativ 99.5 2.3E-14 7.7E-19 113.8 8.7 106 186-293 3-111 (117)
67 3u4t_A TPR repeat-containing p 99.5 8.2E-14 2.8E-18 122.5 13.0 124 176-301 77-203 (272)
68 1fch_A Peroxisomal targeting s 99.5 1.8E-13 6.2E-18 125.2 15.5 124 178-304 187-312 (368)
69 1ihg_A Cyclophilin 40; ppiase 99.5 6.9E-14 2.3E-18 135.0 12.8 122 176-299 226-363 (370)
70 2r5s_A Uncharacterized protein 99.5 3.2E-14 1.1E-18 120.5 9.2 124 176-301 9-132 (176)
71 2kck_A TPR repeat; tetratricop 99.5 2.8E-13 9.4E-18 102.5 12.9 102 173-276 6-110 (112)
72 3ieg_A DNAJ homolog subfamily 99.5 3.4E-13 1.1E-17 121.4 15.7 125 176-302 6-145 (359)
73 1wao_1 Serine/threonine protei 99.5 2.9E-14 1E-18 141.8 9.6 124 176-301 9-134 (477)
74 3mkr_A Coatomer subunit epsilo 99.5 7.7E-13 2.6E-17 122.5 18.1 125 172-297 129-254 (291)
75 3urz_A Uncharacterized protein 99.5 1.3E-13 4.6E-18 120.4 12.1 123 176-301 57-181 (208)
76 3qou_A Protein YBBN; thioredox 99.5 3.6E-13 1.2E-17 123.9 15.2 126 174-301 118-243 (287)
77 2r5s_A Uncharacterized protein 99.5 1.2E-13 4.1E-18 117.0 10.9 128 172-301 39-168 (176)
78 1xnf_A Lipoprotein NLPI; TPR, 99.5 5.5E-14 1.9E-18 123.2 9.0 116 185-302 17-136 (275)
79 3upv_A Heat shock protein STI1 99.5 4.9E-13 1.7E-17 106.2 13.4 96 204-301 1-96 (126)
80 3ieg_A DNAJ homolog subfamily 99.5 5.3E-13 1.8E-17 120.1 15.3 126 174-301 38-178 (359)
81 3qky_A Outer membrane assembly 99.5 4.6E-13 1.6E-17 119.2 14.5 131 172-303 14-174 (261)
82 2ond_A Cleavage stimulation fa 99.5 2.8E-13 9.5E-18 124.8 13.3 128 173-301 99-227 (308)
83 2hr2_A Hypothetical protein; a 99.5 1.4E-13 4.9E-18 120.3 10.4 110 176-287 14-146 (159)
84 2e2e_A Formate-dependent nitri 99.5 6E-13 2.1E-17 111.4 13.5 108 172-280 43-152 (177)
85 3cv0_A Peroxisome targeting si 99.5 5.4E-13 1.8E-17 119.1 13.9 119 183-303 148-266 (327)
86 3fp2_A TPR repeat-containing p 99.5 7.9E-13 2.7E-17 127.1 15.9 128 174-303 277-404 (537)
87 2kck_A TPR repeat; tetratricop 99.5 4E-13 1.4E-17 101.6 11.0 98 202-301 1-101 (112)
88 2vsy_A XCC0866; transferase, g 99.5 4.4E-13 1.5E-17 133.5 13.9 114 187-302 3-116 (568)
89 3q49_B STIP1 homology and U bo 99.5 1.8E-12 6.2E-17 103.0 14.8 101 201-303 3-103 (137)
90 1zu2_A Mitochondrial import re 99.5 2E-13 6.9E-18 119.3 10.0 98 185-284 14-132 (158)
91 2yhc_A BAMD, UPF0169 lipoprote 99.5 8.3E-13 2.8E-17 116.2 13.7 126 175-301 43-208 (225)
92 3sz7_A HSC70 cochaperone (SGT) 99.5 1E-12 3.4E-17 109.5 13.5 97 203-301 7-103 (164)
93 2y4t_A DNAJ homolog subfamily 99.5 2.3E-12 7.8E-17 121.4 17.5 127 173-301 211-353 (450)
94 1qqe_A Vesicular transport pro 99.4 6.5E-13 2.2E-17 121.9 13.2 125 175-301 79-223 (292)
95 2xpi_A Anaphase-promoting comp 99.4 1.8E-12 6.1E-17 126.9 17.1 129 173-303 373-501 (597)
96 2y4t_A DNAJ homolog subfamily 99.4 2.1E-12 7.3E-17 121.6 16.4 129 172-302 25-168 (450)
97 3edt_B KLC 2, kinesin light ch 99.4 3.9E-13 1.3E-17 116.9 10.4 129 175-305 45-197 (283)
98 2xpi_A Anaphase-promoting comp 99.4 2.2E-12 7.4E-17 126.3 16.9 124 176-301 444-574 (597)
99 2kat_A Uncharacterized protein 99.4 1E-12 3.4E-17 103.2 11.8 103 190-294 2-106 (115)
100 3qky_A Outer membrane assembly 99.4 8.5E-13 2.9E-17 117.5 12.5 125 175-301 54-219 (261)
101 2if4_A ATFKBP42; FKBP-like, al 99.4 1.7E-13 5.9E-18 129.7 8.0 124 176-301 182-323 (338)
102 1hh8_A P67PHOX, NCF-2, neutrop 99.4 3.5E-12 1.2E-16 108.8 14.4 103 174-278 38-156 (213)
103 3edt_B KLC 2, kinesin light ch 99.4 1.2E-12 4.1E-17 113.8 11.0 125 175-301 87-276 (283)
104 2yhc_A BAMD, UPF0169 lipoprote 99.4 2.3E-12 7.9E-17 113.3 12.8 126 176-302 7-172 (225)
105 4gcn_A Protein STI-1; structur 99.4 3E-12 1E-16 104.1 12.2 96 206-303 7-109 (127)
106 3fp2_A TPR repeat-containing p 99.4 3.7E-12 1.3E-16 122.4 14.6 125 176-303 246-370 (537)
107 1p5q_A FKBP52, FK506-binding p 99.4 3.8E-13 1.3E-17 127.0 7.5 114 186-301 126-254 (336)
108 2ond_A Cleavage stimulation fa 99.4 5E-12 1.7E-16 116.3 14.5 129 172-302 49-194 (308)
109 2c2l_A CHIP, carboxy terminus 99.4 7.2E-13 2.5E-17 121.7 8.7 100 175-276 6-105 (281)
110 1hxi_A PEX5, peroxisome target 99.4 3.8E-12 1.3E-16 102.9 11.7 90 210-301 20-109 (121)
111 2pzi_A Probable serine/threoni 99.4 2.1E-12 7.1E-17 133.5 12.4 115 184-301 402-524 (681)
112 2fo7_A Synthetic consensus TPR 99.4 1E-11 3.6E-16 95.5 13.0 100 175-276 37-136 (136)
113 2gw1_A Mitochondrial precursor 99.4 2.4E-12 8.2E-17 122.4 11.3 127 174-302 271-397 (514)
114 2l6j_A TPR repeat-containing p 99.3 3.4E-12 1.2E-16 97.6 9.4 94 206-301 3-102 (111)
115 2lni_A Stress-induced-phosphop 99.3 9.3E-12 3.2E-16 97.1 11.8 99 203-303 12-110 (133)
116 2fbn_A 70 kDa peptidylprolyl i 99.3 1.5E-12 5.1E-17 111.7 7.5 115 185-301 16-146 (198)
117 2gw1_A Mitochondrial precursor 99.3 3.9E-12 1.3E-16 121.0 11.0 129 172-302 303-440 (514)
118 1elw_A TPR1-domain of HOP; HOP 99.3 3.4E-11 1.2E-15 91.4 13.7 94 206-301 3-96 (118)
119 4g1t_A Interferon-induced prot 99.3 9E-12 3.1E-16 118.6 13.0 141 172-315 246-465 (472)
120 3nf1_A KLC 1, kinesin light ch 99.3 4E-12 1.4E-16 112.6 9.8 126 174-301 112-302 (311)
121 2vyi_A SGTA protein; chaperone 99.3 1.6E-11 5.4E-16 94.7 11.9 100 201-302 6-105 (131)
122 3nf1_A KLC 1, kinesin light ch 99.3 4.4E-12 1.5E-16 112.4 9.7 128 175-304 71-222 (311)
123 3mkr_A Coatomer subunit epsilo 99.3 8.9E-12 3.1E-16 115.4 12.1 126 172-303 100-226 (291)
124 1na0_A Designed protein CTPR3; 99.3 5.5E-11 1.9E-15 90.9 14.5 99 202-302 3-102 (125)
125 3ro3_A PINS homolog, G-protein 99.3 8.3E-12 2.8E-16 99.1 10.2 126 176-303 12-155 (164)
126 1na3_A Designed protein CTPR2; 99.3 2.4E-11 8.2E-16 89.8 12.0 85 205-291 7-91 (91)
127 1qqe_A Vesicular transport pro 99.3 1E-11 3.5E-16 113.8 11.9 122 179-302 43-183 (292)
128 2dba_A Smooth muscle cell asso 99.3 2.9E-11 1E-15 96.2 12.7 100 201-302 22-124 (148)
129 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 1.6E-12 5.5E-17 128.1 6.1 115 185-301 246-375 (457)
130 4g1t_A Interferon-induced prot 99.3 1.9E-11 6.5E-16 116.4 13.1 118 184-301 149-271 (472)
131 2ooe_A Cleavage stimulation fa 99.3 1.8E-11 6.2E-16 120.7 12.8 130 172-302 320-450 (530)
132 2qfc_A PLCR protein; TPR, HTH, 99.3 7.3E-11 2.5E-15 107.5 15.6 124 176-301 118-261 (293)
133 1elr_A TPR2A-domain of HOP; HO 99.3 3.1E-11 1E-15 93.3 11.0 97 205-303 2-105 (131)
134 3ulq_A Response regulator aspa 99.3 2E-11 6.7E-16 114.6 11.2 128 173-302 143-289 (383)
135 2xev_A YBGF; tetratricopeptide 99.2 6.8E-11 2.3E-15 92.9 12.0 92 209-302 4-101 (129)
136 3rkv_A Putative peptidylprolyl 99.2 5.4E-11 1.9E-15 98.7 12.0 93 207-301 11-121 (162)
137 2hr2_A Hypothetical protein; a 99.2 6.4E-11 2.2E-15 103.5 12.7 94 207-302 11-127 (159)
138 3u3w_A Transcriptional activat 99.2 2.6E-11 8.8E-16 110.6 10.5 123 177-301 119-261 (293)
139 4a1s_A PINS, partner of inscut 99.2 2.4E-11 8.4E-16 113.2 10.6 124 176-301 51-207 (411)
140 1a17_A Serine/threonine protei 99.2 1.7E-10 5.9E-15 93.4 14.3 94 207-302 13-106 (166)
141 1ouv_A Conserved hypothetical 99.2 2.7E-10 9.2E-15 101.4 16.7 122 173-301 6-138 (273)
142 3ma5_A Tetratricopeptide repea 99.2 6E-11 2.1E-15 92.3 10.7 89 202-292 2-92 (100)
143 3gw4_A Uncharacterized protein 99.2 3E-11 1E-15 101.4 9.3 127 174-302 27-172 (203)
144 2c2l_A CHIP, carboxy terminus 99.2 1.1E-10 3.6E-15 107.2 13.6 97 204-302 1-97 (281)
145 2ifu_A Gamma-SNAP; membrane fu 99.2 4.5E-11 1.5E-15 110.3 11.0 124 175-301 78-219 (307)
146 3sf4_A G-protein-signaling mod 99.2 2.4E-11 8.4E-16 111.6 9.1 126 175-302 189-332 (406)
147 2l6j_A TPR repeat-containing p 99.2 1.2E-11 4.2E-16 94.5 4.6 91 176-268 7-103 (111)
148 2kc7_A BFR218_protein; tetratr 99.2 2.9E-11 9.9E-16 91.9 6.7 90 177-276 4-94 (99)
149 3ro2_A PINS homolog, G-protein 99.2 8.2E-11 2.8E-15 103.9 10.2 113 178-292 10-138 (338)
150 4a1s_A PINS, partner of inscut 99.2 3E-11 1E-15 112.6 7.2 125 175-301 225-367 (411)
151 3ro2_A PINS homolog, G-protein 99.2 4.3E-11 1.5E-15 105.7 7.8 125 175-301 185-327 (338)
152 1ouv_A Conserved hypothetical 99.2 1E-09 3.5E-14 97.6 16.7 124 171-301 72-210 (273)
153 3sf4_A G-protein-signaling mod 99.2 1.2E-10 4E-15 107.1 10.7 124 176-301 12-171 (406)
154 3ulq_A Response regulator aspa 99.2 7.2E-11 2.5E-15 110.7 9.3 125 178-304 108-251 (383)
155 2qfc_A PLCR protein; TPR, HTH, 99.2 1.2E-09 4.2E-14 99.4 17.1 125 177-303 79-222 (293)
156 1na3_A Designed protein CTPR2; 99.1 6E-10 2E-14 82.2 11.5 79 175-254 11-89 (91)
157 3k9i_A BH0479 protein; putativ 99.1 3.9E-11 1.3E-15 95.0 5.2 81 221-302 3-86 (117)
158 3q15_A PSP28, response regulat 99.1 1.6E-10 5.5E-15 108.6 10.3 130 173-304 141-288 (378)
159 2ooe_A Cleavage stimulation fa 99.1 2.6E-10 8.8E-15 112.4 12.2 127 174-301 357-487 (530)
160 3rjv_A Putative SEL1 repeat pr 99.1 2E-10 6.7E-15 100.8 9.2 125 171-301 16-153 (212)
161 2if4_A ATFKBP42; FKBP-like, al 99.1 9.2E-11 3.1E-15 110.9 6.5 103 175-278 232-334 (338)
162 3rjv_A Putative SEL1 repeat pr 99.1 3.9E-10 1.3E-14 98.9 9.7 126 172-301 49-192 (212)
163 2ifu_A Gamma-SNAP; membrane fu 99.1 3.7E-10 1.3E-14 104.1 9.7 123 178-303 41-181 (307)
164 3qou_A Protein YBBN; thioredox 99.0 2.5E-09 8.5E-14 98.2 14.2 98 202-301 112-209 (287)
165 3u3w_A Transcriptional activat 99.0 9.1E-10 3.1E-14 100.2 11.2 124 178-303 80-222 (293)
166 1dce_A Protein (RAB geranylger 99.0 6.1E-09 2.1E-13 106.3 18.0 117 183-301 38-168 (567)
167 3gw4_A Uncharacterized protein 99.0 1E-09 3.6E-14 91.9 10.0 118 184-303 3-133 (203)
168 2kat_A Uncharacterized protein 99.0 1.9E-09 6.4E-14 84.3 10.4 76 226-302 3-78 (115)
169 3dra_A Protein farnesyltransfe 99.0 1E-08 3.6E-13 97.4 16.7 123 177-301 36-170 (306)
170 1hz4_A MALT regulatory protein 99.0 1.9E-09 6.4E-14 100.0 11.2 125 176-302 56-199 (373)
171 1wao_1 Serine/threonine protei 99.0 7E-10 2.4E-14 110.2 7.9 123 173-297 40-186 (477)
172 1ihg_A Cyclophilin 40; ppiase 99.0 2.6E-09 8.7E-14 102.9 10.9 93 207-301 223-331 (370)
173 1zu2_A Mitochondrial import re 98.9 9.8E-10 3.4E-14 95.9 7.0 80 221-301 15-115 (158)
174 3q15_A PSP28, response regulat 98.9 3.1E-09 1.1E-13 99.7 11.0 98 175-274 184-292 (378)
175 2kc7_A BFR218_protein; tetratr 98.9 1.1E-08 3.7E-13 77.4 12.0 77 211-289 4-83 (99)
176 1hz4_A MALT regulatory protein 98.9 4.8E-09 1.7E-13 97.2 11.7 126 177-304 18-162 (373)
177 3e4b_A ALGK; tetratricopeptide 98.9 9.1E-09 3.1E-13 100.8 12.8 124 172-301 175-311 (452)
178 4f3v_A ESX-1 secretion system 98.9 1.4E-09 4.9E-14 102.8 6.6 125 174-301 103-232 (282)
179 1dce_A Protein (RAB geranylger 98.9 8.5E-09 2.9E-13 105.2 12.3 100 189-290 89-191 (567)
180 3n71_A Histone lysine methyltr 98.9 4.4E-09 1.5E-13 106.0 9.8 122 178-301 314-459 (490)
181 3bee_A Putative YFRE protein; 98.9 1E-08 3.5E-13 80.8 9.8 72 203-276 2-76 (93)
182 3ro3_A PINS homolog, G-protein 98.9 9.2E-09 3.1E-13 81.3 9.5 99 175-275 51-161 (164)
183 3dra_A Protein farnesyltransfe 98.8 4.3E-08 1.5E-12 93.1 14.5 103 188-292 84-195 (306)
184 2xm6_A Protein corresponding t 98.8 5.4E-08 1.8E-12 94.8 15.5 121 173-301 255-391 (490)
185 2xm6_A Protein corresponding t 98.8 6.4E-08 2.2E-12 94.3 15.6 124 171-301 289-427 (490)
186 3e4b_A ALGK; tetratricopeptide 98.8 2.8E-08 9.5E-13 97.3 12.2 115 177-301 217-346 (452)
187 3q7a_A Farnesyltransferase alp 98.8 6.1E-08 2.1E-12 94.2 14.2 115 179-294 59-176 (349)
188 3dss_A Geranylgeranyl transfer 98.7 2.2E-07 7.5E-12 89.5 16.3 118 182-301 38-169 (331)
189 1klx_A Cysteine rich protein B 98.7 1.2E-07 4E-12 78.4 12.5 106 187-301 9-121 (138)
190 3ma5_A Tetratricopeptide repea 98.7 3.4E-08 1.2E-12 76.5 8.7 64 237-301 2-65 (100)
191 1pc2_A Mitochondria fission pr 98.7 5.6E-08 1.9E-12 84.3 10.8 98 188-287 13-115 (152)
192 3dss_A Geranylgeranyl transfer 98.7 1.6E-07 5.4E-12 90.6 14.6 101 188-290 125-240 (331)
193 3q7a_A Farnesyltransferase alp 98.7 1.5E-07 5.2E-12 91.4 12.6 111 181-292 96-216 (349)
194 2v5f_A Prolyl 4-hydroxylase su 98.7 3.1E-07 1E-11 72.5 12.0 79 206-286 4-89 (104)
195 1klx_A Cysteine rich protein B 98.6 3.8E-07 1.3E-11 75.2 12.4 100 179-284 31-136 (138)
196 3u64_A Protein TP_0956; tetrat 98.6 1E-07 3.5E-12 90.9 9.1 89 187-275 177-272 (301)
197 4f3v_A ESX-1 secretion system 98.5 2.7E-07 9.3E-12 87.2 10.2 114 175-291 137-255 (282)
198 3qww_A SET and MYND domain-con 98.5 4.5E-07 1.6E-11 90.0 11.2 95 185-281 310-425 (433)
199 3mv2_B Coatomer subunit epsilo 98.5 5.9E-07 2E-11 86.0 11.1 119 177-301 104-235 (310)
200 3ly7_A Transcriptional activat 98.5 3.3E-07 1.1E-11 89.9 8.9 112 188-301 214-334 (372)
201 2v5f_A Prolyl 4-hydroxylase su 98.4 1.3E-06 4.6E-11 68.7 10.2 72 177-249 9-87 (104)
202 3qwp_A SET and MYND domain-con 98.4 5.4E-07 1.8E-11 89.1 9.3 105 181-287 295-423 (429)
203 4e6h_A MRNA 3'-END-processing 98.4 1.1E-06 3.9E-11 91.8 10.8 125 176-301 437-565 (679)
204 4e6h_A MRNA 3'-END-processing 98.3 4.5E-06 1.5E-10 87.3 13.9 59 177-236 347-406 (679)
205 4b4t_Q 26S proteasome regulato 98.3 1.4E-06 4.7E-11 81.8 8.6 125 176-302 58-200 (434)
206 4b4t_Q 26S proteasome regulato 98.3 1.4E-06 4.8E-11 81.7 8.2 126 177-304 8-162 (434)
207 3bee_A Putative YFRE protein; 98.3 2.8E-06 9.7E-11 66.6 8.5 71 172-243 5-78 (93)
208 3u64_A Protein TP_0956; tetrat 98.2 4.8E-06 1.6E-10 79.4 10.8 98 203-301 148-264 (301)
209 3mv2_B Coatomer subunit epsilo 98.2 4.8E-06 1.6E-10 79.7 10.2 118 178-302 76-203 (310)
210 3n71_A Histone lysine methyltr 98.2 1.9E-06 6.6E-11 86.7 7.4 96 176-273 354-465 (490)
211 2uy1_A Cleavage stimulation fa 98.1 4.1E-05 1.4E-09 76.5 14.8 127 173-301 213-378 (493)
212 1xi4_A Clathrin heavy chain; a 98.1 3.4E-05 1.2E-09 86.5 14.3 114 173-301 1105-1245(1630)
213 1nzn_A CGI-135 protein, fissio 98.0 4.4E-05 1.5E-09 64.2 10.9 97 187-285 15-116 (126)
214 1b89_A Protein (clathrin heavy 98.0 2.1E-05 7.2E-10 78.8 9.7 100 177-290 126-254 (449)
215 1pc2_A Mitochondria fission pr 98.0 2E-05 6.9E-10 68.2 8.0 71 175-246 34-109 (152)
216 3qww_A SET and MYND domain-con 98.0 1.3E-05 4.5E-10 79.4 7.8 80 221-301 311-406 (433)
217 1xi4_A Clathrin heavy chain; a 97.9 5E-05 1.7E-09 85.2 12.0 63 205-274 1103-1165(1630)
218 2uy1_A Cleavage stimulation fa 97.9 0.00011 3.7E-09 73.5 13.3 121 175-301 288-408 (493)
219 3ly7_A Transcriptional activat 97.9 4.6E-05 1.6E-09 74.7 10.2 74 201-277 271-344 (372)
220 3qwp_A SET and MYND domain-con 97.8 5.6E-05 1.9E-09 74.6 8.8 81 220-301 299-395 (429)
221 1b89_A Protein (clathrin heavy 97.7 0.00019 6.5E-09 71.9 11.6 92 176-273 151-273 (449)
222 4h7y_A Dual specificity protei 97.6 0.00042 1.4E-08 60.3 11.2 111 178-292 18-142 (161)
223 4h7y_A Dual specificity protei 97.4 0.00065 2.2E-08 59.1 9.5 99 200-301 6-118 (161)
224 3ffl_A Anaphase-promoting comp 97.3 0.0012 4E-08 58.0 10.1 80 221-301 33-146 (167)
225 1y8m_A FIS1; mitochondria, unk 97.2 0.0064 2.2E-07 52.1 12.9 80 204-284 36-118 (144)
226 4g26_A Pentatricopeptide repea 97.1 0.0086 2.9E-07 59.9 15.4 113 187-301 84-199 (501)
227 3o48_A Mitochondria fission 1 97.0 0.0029 1E-07 53.6 8.8 81 206-287 39-122 (134)
228 1nzn_A CGI-135 protein, fissio 97.0 0.0017 5.7E-08 54.5 7.2 71 175-246 37-112 (126)
229 3ffl_A Anaphase-promoting comp 96.9 0.0048 1.6E-07 54.1 10.0 105 180-287 27-165 (167)
230 4g26_A Pentatricopeptide repea 96.8 0.031 1.1E-06 55.9 15.9 124 178-302 31-165 (501)
231 4gns_B Protein CSD3, chitin bi 96.7 0.0052 1.8E-07 65.2 10.1 115 182-297 257-391 (754)
232 1y8m_A FIS1; mitochondria, unk 96.6 0.013 4.4E-07 50.2 9.7 71 175-246 41-115 (144)
233 3o48_A Mitochondria fission 1 96.5 0.011 3.8E-07 50.0 8.9 70 176-246 43-116 (134)
234 1zbp_A Hypothetical protein VP 96.3 0.05 1.7E-06 51.1 12.8 68 183-251 7-74 (273)
235 1ya0_A SMG-7 transcript varian 95.8 0.046 1.6E-06 55.2 10.8 67 221-288 165-231 (497)
236 3mkq_A Coatomer beta'-subunit; 94.7 0.26 8.7E-06 49.7 12.3 43 221-269 665-707 (814)
237 1ya0_A SMG-7 transcript varian 94.7 0.097 3.3E-06 52.8 9.1 78 176-254 155-232 (497)
238 3mkq_A Coatomer beta'-subunit; 94.6 0.22 7.5E-06 50.2 11.7 87 177-265 633-745 (814)
239 2ff4_A Probable regulatory pro 94.3 0.33 1.1E-05 46.8 11.5 85 186-272 128-234 (388)
240 4b4t_R RPN7, 26S proteasome re 93.9 0.39 1.3E-05 46.8 11.3 98 176-274 134-239 (429)
241 1zbp_A Hypothetical protein VP 93.7 0.29 9.8E-06 45.9 9.5 58 221-279 10-67 (273)
242 3kae_A CDC27, possible protein 93.4 1.4 4.8E-05 39.4 12.7 88 181-275 41-146 (242)
243 2ff4_A Probable regulatory pro 92.5 1.3 4.4E-05 42.6 12.3 54 247-301 176-229 (388)
244 3txn_A 26S proteasome regulato 91.9 0.73 2.5E-05 45.1 9.9 95 178-273 104-211 (394)
245 4gns_B Protein CSD3, chitin bi 91.4 0.58 2E-05 49.6 9.2 59 210-274 340-398 (754)
246 3kae_A CDC27, possible protein 90.2 5.8 0.0002 35.5 12.9 120 180-301 69-232 (242)
247 4b4t_P 26S proteasome regulato 89.6 4.1 0.00014 39.9 13.0 95 177-272 141-247 (445)
248 3mkq_B Coatomer subunit alpha; 86.5 14 0.00048 32.2 13.1 46 183-234 15-60 (177)
249 3spa_A Mtrpol, DNA-directed RN 86.2 7.5 0.00026 42.9 13.3 92 179-274 133-232 (1134)
250 3spa_A Mtrpol, DNA-directed RN 85.4 12 0.00042 41.3 14.5 91 207-300 127-224 (1134)
251 4fhn_B Nucleoporin NUP120; pro 84.3 5.2 0.00018 43.7 11.2 115 178-298 817-959 (1139)
252 3mkq_B Coatomer subunit alpha; 84.1 4.1 0.00014 35.6 8.4 55 205-269 6-60 (177)
253 4fhn_B Nucleoporin NUP120; pro 81.9 5.5 0.00019 43.5 10.2 115 175-292 844-986 (1139)
254 2v6y_A AAA family ATPase, P60 76.6 4.4 0.00015 30.8 5.4 13 225-237 9-21 (83)
255 2w2u_A Hypothetical P60 katani 76.4 4.5 0.00015 31.0 5.4 13 225-237 17-29 (83)
256 4b4t_S RPN3, 26S proteasome re 76.4 2.8 9.7E-05 42.6 5.4 117 182-302 145-295 (523)
257 4b4t_S RPN3, 26S proteasome re 75.7 2.1 7.3E-05 43.5 4.3 71 203-276 226-303 (523)
258 4b4t_R RPN7, 26S proteasome re 74.7 5.7 0.00019 38.5 6.9 95 207-303 131-234 (429)
259 2o8p_A 14-3-3 domain containin 74.0 15 0.00052 33.3 9.1 26 247-272 172-197 (227)
260 3txn_A 26S proteasome regulato 73.5 20 0.00068 34.8 10.4 91 211-303 103-207 (394)
261 2o8p_A 14-3-3 domain containin 72.6 25 0.00085 31.9 10.1 50 187-236 139-196 (227)
262 1wy6_A Hypothetical protein ST 68.2 17 0.00057 31.4 7.4 82 187-274 75-156 (172)
263 1qsa_A Protein (soluble lytic 68.1 45 0.0015 34.2 12.2 112 188-301 229-343 (618)
264 2cpt_A SKD1 protein, vacuolar 67.2 28 0.00097 28.1 8.5 48 189-245 15-62 (117)
265 1wfd_A Hypothetical protein 15 66.5 9.9 0.00034 29.5 5.4 33 188-236 11-43 (93)
266 4a5x_A MITD1, MIT domain-conta 66.4 8.9 0.00031 29.4 5.0 15 221-235 29-43 (86)
267 2cpt_A SKD1 protein, vacuolar 65.9 8.8 0.0003 31.2 5.1 14 224-237 15-28 (117)
268 2br9_A 14-3-3E, 14-3-3 protein 65.6 7.6 0.00026 35.4 5.2 35 237-271 164-201 (234)
269 1wy6_A Hypothetical protein ST 65.2 35 0.0012 29.3 8.9 112 185-301 19-149 (172)
270 3esl_A Checkpoint serine/threo 65.0 61 0.0021 28.8 10.9 111 189-301 8-139 (202)
271 2v6x_A Vacuolar protein sortin 63.0 13 0.00045 28.0 5.4 18 219-236 24-41 (85)
272 2v6y_A AAA family ATPase, P60 62.5 34 0.0011 25.8 7.6 43 190-241 9-51 (83)
273 1o9d_A 14-3-3-like protein C; 62.2 9.4 0.00032 35.4 5.2 34 237-270 169-205 (260)
274 1wfd_A Hypothetical protein 15 62.0 34 0.0012 26.3 7.7 15 224-238 12-26 (93)
275 3iqu_A 14-3-3 protein sigma; s 61.3 10 0.00034 34.7 5.1 22 248-269 181-202 (236)
276 2w2u_A Hypothetical P60 katani 60.7 34 0.0012 25.9 7.3 43 189-240 16-58 (83)
277 3uzd_A 14-3-3 protein gamma; s 60.1 11 0.00037 34.7 5.2 46 224-271 154-202 (248)
278 3ubw_A 14-3-3E, 14-3-3 protein 59.9 11 0.00037 35.0 5.2 46 224-271 179-227 (261)
279 2npm_A 14-3-3 domain containin 58.9 12 0.0004 34.7 5.2 35 237-271 189-226 (260)
280 4b4t_P 26S proteasome regulato 58.7 1.3E+02 0.0043 29.1 13.0 93 209-303 139-244 (445)
281 3esl_A Checkpoint serine/threo 58.5 53 0.0018 29.2 9.2 80 194-276 58-148 (202)
282 4a5x_A MITD1, MIT domain-conta 57.6 48 0.0016 25.2 7.8 42 190-240 14-55 (86)
283 3iqu_A 14-3-3 protein sigma; s 56.3 25 0.00085 32.1 6.9 47 190-236 150-204 (236)
284 1qsa_A Protein (soluble lytic 56.0 46 0.0016 34.1 9.7 80 189-271 268-347 (618)
285 2npm_A 14-3-3 domain containin 55.1 26 0.00088 32.4 6.8 47 190-236 173-226 (260)
286 3uzd_A 14-3-3 protein gamma; s 54.4 27 0.00093 32.0 6.8 47 190-236 148-202 (248)
287 3efz_A 14-3-3 protein; 14-3-3, 52.4 20 0.00068 33.4 5.6 49 224-272 175-226 (268)
288 1o9d_A 14-3-3-like protein C; 52.4 30 0.001 31.9 6.8 47 190-236 152-206 (260)
289 2br9_A 14-3-3E, 14-3-3 protein 52.0 34 0.0012 31.1 7.0 47 190-236 147-201 (234)
290 3ubw_A 14-3-3E, 14-3-3 protein 50.4 34 0.0012 31.7 6.8 26 211-236 202-227 (261)
291 3t5x_A PCI domain-containing p 49.9 36 0.0012 29.7 6.7 85 208-301 15-103 (203)
292 4gq2_M Nucleoporin NUP120; bet 46.6 2.1E+02 0.0073 30.5 13.3 95 179-278 816-933 (950)
293 2v6x_A Vacuolar protein sortin 46.1 74 0.0025 23.7 7.1 43 189-240 10-52 (85)
294 2wpv_A GET4, UPF0363 protein Y 45.5 1.1E+02 0.0039 28.6 9.8 66 170-235 131-215 (312)
295 3re2_A Predicted protein; meni 45.2 54 0.0018 32.3 7.5 64 207-272 255-325 (472)
296 2wpv_A GET4, UPF0363 protein Y 43.1 2.1E+02 0.0072 26.7 11.4 110 187-298 27-155 (312)
297 4gq4_A Menin; tumor suppressor 42.7 1.2E+02 0.004 30.3 9.5 75 176-251 265-352 (489)
298 3re2_A Predicted protein; meni 42.2 1.3E+02 0.0044 29.6 9.6 61 176-237 258-325 (472)
299 4a1g_A Mitotic checkpoint seri 41.4 79 0.0027 26.7 7.3 50 227-277 84-135 (152)
300 3efz_A 14-3-3 protein; 14-3-3, 40.5 26 0.00088 32.6 4.3 24 212-235 201-224 (268)
301 4gq4_A Menin; tumor suppressor 40.4 1.5E+02 0.0052 29.5 9.9 76 206-283 261-349 (489)
302 4aez_C MAD3, mitotic spindle c 39.0 72 0.0025 28.7 7.0 50 226-276 132-183 (223)
303 2wvi_A Mitotic checkpoint seri 36.9 76 0.0026 27.1 6.5 61 207-275 66-128 (164)
304 2ijq_A Hypothetical protein; s 36.6 1.9E+02 0.0064 24.6 8.9 56 215-272 40-104 (161)
305 2ca5_A MXIH; transport protein 36.1 36 0.0012 26.3 3.8 43 211-253 13-55 (85)
306 3u84_A Menin; MLL, JUND, ledgf 35.8 87 0.003 31.3 7.4 46 226-272 297-347 (550)
307 3t5v_B Nuclear mRNA export pro 35.4 90 0.0031 30.9 7.7 66 175-241 178-254 (455)
308 2ijq_A Hypothetical protein; s 35.3 1.1E+02 0.0039 26.0 7.4 59 178-236 37-103 (161)
309 4aez_C MAD3, mitotic spindle c 35.2 2.5E+02 0.0084 25.2 11.3 109 189-301 51-174 (223)
310 3lpz_A GET4 (YOR164C homolog); 34.9 3E+02 0.01 26.1 14.6 121 170-292 133-297 (336)
311 3u84_A Menin; MLL, JUND, ledgf 34.1 1.4E+02 0.0048 29.9 8.6 75 176-251 280-367 (550)
312 2cfu_A SDSA1; SDS-hydrolase, l 33.9 67 0.0023 33.0 6.7 47 247-294 454-500 (658)
313 4a1g_A Mitotic checkpoint seri 33.9 2.1E+02 0.0072 24.0 9.2 42 260-301 82-125 (152)
314 3t5v_B Nuclear mRNA export pro 31.3 1.1E+02 0.0037 30.3 7.5 87 188-276 141-254 (455)
315 3ax2_A Mitochondrial import re 30.9 1.1E+02 0.0039 22.7 5.8 24 221-244 30-53 (73)
316 4b4t_O 26S proteasome regulato 30.4 1.3E+02 0.0046 28.5 7.8 53 219-272 87-156 (393)
317 3lpz_A GET4 (YOR164C homolog); 29.6 3.7E+02 0.013 25.5 12.2 61 240-301 134-211 (336)
318 2l6f_A Focal adhesion kinase 1 35.5 11 0.00039 33.8 0.0 6 105-110 129-134 (215)
319 2cfu_A SDSA1; SDS-hydrolase, l 28.7 1E+02 0.0035 31.6 7.0 42 214-257 456-497 (658)
320 4b4t_O 26S proteasome regulato 28.6 3.5E+02 0.012 25.5 10.5 89 183-272 86-198 (393)
321 3t5x_A PCI domain-containing p 28.5 1.2E+02 0.0043 26.2 6.7 31 177-207 18-48 (203)
322 2crb_A Nuclear receptor bindin 28.2 88 0.003 24.7 4.9 21 248-269 21-41 (97)
323 3ax2_A Mitochondrial import re 28.0 1.9E+02 0.0063 21.5 6.8 34 248-282 23-56 (73)
324 1g1e_B SIN3A; four-helix bundl 27.0 2E+02 0.0069 21.8 6.9 28 189-216 10-37 (89)
325 2rpa_A Katanin P60 ATPase-cont 26.3 44 0.0015 25.3 2.8 25 177-201 16-40 (78)
326 4ah2_B HLA class II histocompa 25.8 20 0.00068 32.0 0.9 16 141-156 11-26 (229)
327 2g0u_A Type III secretion syst 23.4 74 0.0025 24.9 3.7 30 223-252 31-60 (92)
328 3bqo_A Telomeric repeat-bindin 23.0 99 0.0034 27.7 4.9 37 216-252 125-161 (211)
329 2p58_C Putative type III secre 21.3 3.3E+02 0.011 22.0 7.3 73 187-267 21-93 (116)
330 2wvi_A Mitotic checkpoint seri 20.5 3.9E+02 0.013 22.6 10.6 52 192-244 79-132 (164)
331 3bu8_A Telomeric repeat-bindin 20.5 2.9E+02 0.0099 25.0 7.4 66 189-254 88-160 (235)
332 2dl1_A Spartin; SPG20, MIT, st 20.1 1.4E+02 0.0047 24.3 4.8 32 189-236 19-50 (116)
333 3mkr_B Coatomer subunit alpha; 20.0 5.5E+02 0.019 24.1 10.0 111 178-290 107-244 (320)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.77 E-value=1.3e-17 Score=136.48 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=104.2
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~ 256 (331)
.|.+..|+..|+|++|+.+|+++|+++|+++.++.++|.++.. .|++++|++.|++||+++|+++.+|..+|.+++. +
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~ 94 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-M 94 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-C
Confidence 4778999999999999999999999999999999999999776 9999999999999999999999999999999998 9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 257 KDASRAESYFDQAVKSAPDDCYVLASYAKFL 287 (331)
Q Consensus 257 Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L 287 (331)
|++++|+.+|+++++++|++..++..++.++
T Consensus 95 ~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 95 REWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999998775
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.74 E-value=2.3e-17 Score=138.07 Aligned_cols=116 Identities=10% Similarity=0.074 Sum_probs=60.6
Q ss_pred hHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 020094 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (331)
Q Consensus 179 ~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd 258 (331)
++.++...+++++|++.|++++..+|+++..++++|.+++. .|++++|+++|+++|+++|+++.+|..+|.++.. .|+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~-~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~ 80 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYE-AKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EEN 80 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCc
Confidence 34444444555555555555555555555555555555443 5555555555555555555555555555555554 555
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHH
Q 020094 259 ASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEE 296 (331)
Q Consensus 259 ~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa 296 (331)
+++|+.+|+++++++|++..++.++|.+|.+.++++++
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a 118 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGR 118 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSH
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHH
Confidence 55555555555555555555555555555555554443
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.73 E-value=2.6e-18 Score=143.89 Aligned_cols=117 Identities=15% Similarity=0.127 Sum_probs=108.5
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|.+|...+++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+|++|++++|+++.++..+|.++..
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 111 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTDKAVECYRRSVELNPTQKDLVLKIAELLCK 111 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999999999999766 9999999999999999999999999999999998
Q ss_pred HcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 020094 255 AHKDASRAESY-FDQAVKSAPDDCYVLASYAKFLWDAGDD 293 (331)
Q Consensus 255 ~~Gd~deA~~y-fekAL~ldP~d~~vl~~LA~~L~~lG~~ 293 (331)
.+++++|..+ +++|++++|+++.++...+.++...|++
T Consensus 112 -~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~d 150 (150)
T 4ga2_A 112 -NDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGED 150 (150)
T ss_dssp -HCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCCC
T ss_pred -cCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCcC
Confidence 9998876654 6999999999999999999999888864
No 4
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.73 E-value=6.3e-17 Score=142.54 Aligned_cols=123 Identities=13% Similarity=-0.008 Sum_probs=66.1
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~ 256 (331)
.++|.++...+++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+.+|+++++++|+++.++..++.++.. .
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~ 86 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLK-LGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-L 86 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-h
Confidence 3445555555555555555555555555555555555555433 5555555555555555555555555555555544 4
Q ss_pred -----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 257 -----------KDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 257 -----------Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
|++++|+.+|+++++++|++..++.++|.++...|++++|...++
T Consensus 87 ~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~ 142 (217)
T 2pl2_A 87 YRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLK 142 (217)
T ss_dssp HHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 555555555555555555555555555555555555555554444
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.72 E-value=4.1e-17 Score=171.52 Aligned_cols=128 Identities=18% Similarity=0.171 Sum_probs=113.7
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.--..|+|.+|...|++++|+++|+++|+++|+++.+++++|.++.. +|++++|+++|++||+++|+++.+|.++|.+
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 344577889999999999999999999999999999999999988766 8999999999999999999999999889888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.. +|++++|+++|++|++++|++..++.++|.+|.++|++++|.+.++
T Consensus 87 l~~-~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~ 135 (723)
T 4gyw_A 87 LKE-MQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYR 135 (723)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 888 9999999999999999999999999999999999999999988877
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.71 E-value=2.2e-16 Score=139.09 Aligned_cols=127 Identities=11% Similarity=-0.046 Sum_probs=118.8
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCC
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-----------GDFAKAEELCGRAILANPS 240 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~-----------gd~ekAee~~erALeldP~ 240 (331)
+.....++|.+|...|++++|+.+|+++++++|+++.++.++|.++.. . |++++|+..|+++++++|+
T Consensus 38 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~ 116 (217)
T 2pl2_A 38 DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYRQAEDRERGKGYLEQALSVLKDAERVNPR 116 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhhhhhhhcccccCHHHHHHHHHHHHHhCcc
Confidence 445567899999999999999999999999999999999999999766 7 9999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 241 DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 241 d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
++.++.+++.++.. .|++++|+.+|++|++++ +++.++.++|.+|...|++++|...++
T Consensus 117 ~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~ 175 (217)
T 2pl2_A 117 YAPLHLQRGLVYAL-LGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYA 175 (217)
T ss_dssp CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH-cCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999988 999999999999999999 999999999999999999999998887
No 7
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.70 E-value=5.9e-16 Score=130.09 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=89.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH----------------------------
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAK---------------------------- 226 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ek---------------------------- 226 (331)
...|+|.+|...|++++|+.+|+++++++|+++.++.++|.++.. .+++++
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM 85 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Confidence 345788888888888888888888888888888888888877544 555555
Q ss_pred ------HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhh
Q 020094 227 ------AEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDN 300 (331)
Q Consensus 227 ------Aee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~ 300 (331)
|++++.++++++|++..++..++.++.. .|++++|+.+|+++++++|++..++.++|.+|.+.|++++|...+
T Consensus 86 ~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 164 (184)
T 3vtx_A 86 IDEKQAAIDALQRAIALNTVYADAYYKLGLVYDS-MGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYF 164 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-hCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHH
Confidence 4555555555555566666556666665 677777777777777777777777777777777777777776666
Q ss_pred h
Q 020094 301 E 301 (331)
Q Consensus 301 ~ 301 (331)
+
T Consensus 165 ~ 165 (184)
T 3vtx_A 165 K 165 (184)
T ss_dssp H
T ss_pred H
Confidence 5
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.69 E-value=4e-16 Score=163.95 Aligned_cols=128 Identities=20% Similarity=0.102 Sum_probs=121.5
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.....|+|.+|...|++++|+++|+++|+++|+++.+++++|.++.. +|++++|+++|++||+++|+++.++.++|.+
T Consensus 42 ~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~ 120 (723)
T 4gyw_A 42 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDVQGALQCYTRAIQINPAFADAHSNLASI 120 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 344567999999999999999999999999999999999999999776 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.. +|++++|+.+|++|++++|++..++.+++.+|..++++++|.+.++
T Consensus 121 ~~~-~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~ 169 (723)
T 4gyw_A 121 HKD-SGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 169 (723)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHH
Confidence 998 9999999999999999999999999999999999999999987665
No 9
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.68 E-value=2.3e-15 Score=126.48 Aligned_cols=104 Identities=13% Similarity=-0.021 Sum_probs=96.0
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....+++.++...++++.|..++++++..+|+++.++..+|.++.. .|++++|+++|+++++++|+++.++.++|.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDS-MGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-hCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 33456788899999999999999999999999999999999999766 99999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDCY 278 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~~ 278 (331)
+. +|++++|+.+|++|++++|+++.
T Consensus 152 ~~-~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 152 EG-KGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HH-TTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HH-CCCHHHHHHHHHHHHhCCccCHH
Confidence 98 99999999999999999997653
No 10
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.4e-15 Score=121.01 Aligned_cols=113 Identities=19% Similarity=0.085 Sum_probs=106.1
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..+.|..+...+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+.+|+++++++|+++.++..++.++..
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~- 84 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA- 84 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-
Confidence 34678999999999999999999999999999999999999776 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHc
Q 020094 256 HKDASRAESYFDQAVKSA------PDDCYVLASYAKFLWDA 290 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ld------P~d~~vl~~LA~~L~~l 290 (331)
.|++++|+.+|+++++++ |++..++..+..+..++
T Consensus 85 ~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 85 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999999999999 99999999998887653
No 11
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.68 E-value=2.7e-15 Score=116.11 Aligned_cols=117 Identities=21% Similarity=0.242 Sum_probs=110.7
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|..+...+++++|+.+|++++..+|+++.++..+|.++.. .+++++|+++|++++.++|+++.++..++.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 14 RLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSK-LGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999999766 9999999999999999999999999999999988
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDD 293 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~ 293 (331)
.|++++|+.+|+++++++|++..++..++.++...|++
T Consensus 93 -~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 93 -LNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp -TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred -hCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998876
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.67 E-value=4e-17 Score=139.37 Aligned_cols=108 Identities=10% Similarity=0.006 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 192 TDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVK 271 (331)
Q Consensus 192 A~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ 271 (331)
+...|++++.++|+++.+++++|.+++. .|++++|+++|+++++++|+++.+|.++|.++.. .|++++|+.+|++|++
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYN-KGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 3344555555666666666666666544 6666666666666666666666666666666665 6666666666666666
Q ss_pred hCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 272 SAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 272 ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
++|+++.+|+++|.+|..+|++++|...++
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 666666666666666666666666665554
No 13
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-15 Score=119.26 Aligned_cols=119 Identities=17% Similarity=0.122 Sum_probs=111.2
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
...-..++|..+...+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+++|+++++++|+++.++..++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-LLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 344467899999999999999999999999999999999999999765 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGD 292 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~ 292 (331)
++. .|++++|+.+|+++++++|.+..++..++.++...++
T Consensus 94 ~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 94 LEA-MKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHH-HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 988 9999999999999999999999999999999988764
No 14
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.67 E-value=2.5e-15 Score=130.71 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=119.2
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANP-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP-~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
-...+.|.+|...+++++|+.+|++++..+| .+..+++++|.++.. .+++++|+++|++|++++|+++.++..++.++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 3456889999999999999999999999999 999999999999766 99999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHcCCchHHHHhhh
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDC-------YVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~-------~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+. +|++++|+.+|+++++++|++. .++..+|.++...|++++|...++
T Consensus 87 ~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 141 (228)
T 4i17_A 87 RD-MKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYK 141 (228)
T ss_dssp HH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHH
Confidence 98 9999999999999999999999 669999999999999999999887
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.66 E-value=1.2e-15 Score=127.33 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=104.3
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....++|..|...+++++|+.+|+++++++|+++.++.++|.++.. .+++++|+.+|+++++++|+++.+|++++.+++
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3466789999999999999999999999999999999999999776 999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD 289 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~ 289 (331)
. .|++++|+.+|+++++++|++..++...+.....
T Consensus 91 ~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 91 D-MADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp H-TTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred H-ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 8 9999999999999999999888866666655443
No 16
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.66 E-value=8.5e-16 Score=134.43 Aligned_cols=115 Identities=10% Similarity=0.117 Sum_probs=107.7
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGN----------------YARFLKEVRGDFAKAEELCGRAILANPS 240 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~n----------------LA~~L~~~~gd~ekAee~~erALeldP~ 240 (331)
...|..+...|++++|+.+|+++++.+|+++.+++. +|.++.. .|++++|+.+|+++++++|+
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~ 86 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKK-NRNYDKAYLFYKELLQKAPN 86 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCCC
Confidence 356778889999999999999999999999999999 9999766 99999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 020094 241 DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDD 293 (331)
Q Consensus 241 d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~ 293 (331)
++.++..+|.+++. .|++++|+.+|+++++++|++..++.++|.+|...++.
T Consensus 87 ~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 87 NVDCLEACAEMQVC-RGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 99999999999998 99999999999999999999999999999999877654
No 17
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.66 E-value=3.8e-15 Score=121.20 Aligned_cols=124 Identities=19% Similarity=0.098 Sum_probs=113.8
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|..+...+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+++|+++++++|+++.++..++.++..
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~- 93 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAASNMA- 93 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 45788999999999999999999999999999999999999766 9999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCchHHHHhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKF--LWDAGDDEEEEQDNE 301 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~--L~~lG~~eEa~~~~~ 301 (331)
.|++++|+.+|+++++++|.+..++..++.+ +...+++++|.+.++
T Consensus 94 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 141 (166)
T 1a17_A 94 LGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 141 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999888555554 888899999987665
No 18
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.65 E-value=6.5e-15 Score=113.69 Aligned_cols=124 Identities=18% Similarity=0.258 Sum_probs=117.3
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~ 256 (331)
.+++.+|...+++++|+.+|++++..+|++..++..+|.++.. .+++++|+.+|++++..+|+++.++..++.++.. .
T Consensus 5 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 82 (136)
T 2fo7_A 5 YNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-Q 82 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHH-hcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-h
Confidence 4678899999999999999999999999999999999998766 8999999999999999999999999999998888 9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 257 KDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 257 Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
|++++|+.+|+++++..|.+..++..++.++...|+.++|...+++
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 128 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 128 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988773
No 19
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.65 E-value=2.5e-15 Score=128.21 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=97.9
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.....++|..|...|++++|+.+|++++.++|+++.+|.++|.++.. .|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~ 113 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYAVAFALGKNDYTPVFHTGQC 113 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCCCCcHHHHHHHHH
Confidence 334577899999999999999999999999999999999999999776 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDC 277 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~ 277 (331)
+.. .|++++|+.+|+++++++|+..
T Consensus 114 ~~~-lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 114 QLR-LKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCHH
Confidence 998 9999999999999999999765
No 20
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.65 E-value=1.5e-15 Score=147.75 Aligned_cols=127 Identities=11% Similarity=0.014 Sum_probs=116.1
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD-FAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd-~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
.-...+++.+|...+++++|+.+|+++|+++|++..+|+++|.++.. .|+ +++|+.+|++||+++|+++.+|.+++.+
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~-~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~ 175 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKS-LQKDLHEEMNYITAIIEEQPKNYQVWHHRRVL 175 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 34467788899999999999999999999999999999999999776 785 9999999999999999999999999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.. .|++++|+.+|++|++++|++..+|.+++.++..+|++++|...++
T Consensus 176 ~~~-~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~ 224 (382)
T 2h6f_A 176 VEW-LRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVD 224 (382)
T ss_dssp HHH-HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred HHH-ccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 888 9999999999999999999999999999999999999999988776
No 21
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.64 E-value=1.3e-14 Score=118.52 Aligned_cols=128 Identities=14% Similarity=0.017 Sum_probs=120.0
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....+++.+|...+++++|+.+|++++..+|+++.++..+|.++.. .+++++|+++|+++++.+|+++.++..++.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ-VQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999998766 99999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+. .|++++|+.+|+++++.+|.+..++..++.++...|+.++|...++.
T Consensus 121 ~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 169 (186)
T 3as5_A 121 DN-LGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKK 169 (186)
T ss_dssp HH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HH-cCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 88 99999999999999999999999999999999999999999988773
No 22
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.63 E-value=1.8e-14 Score=110.58 Aligned_cols=115 Identities=18% Similarity=0.254 Sum_probs=108.2
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...+++.+|...+++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+|+++++.+|.++.++..++.+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999766 9999999999999999999999999999999998
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAG 291 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG 291 (331)
.|++++|+.+|+++++.+|++..++..++.++...|
T Consensus 90 -~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 90 -QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp -TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred -hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999987654
No 23
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.63 E-value=2.9e-15 Score=122.98 Aligned_cols=112 Identities=13% Similarity=-0.062 Sum_probs=97.4
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|..+...+++++|+.+|++++..+|+++.++.++|.++.. .|++++|+.+|++|+.++|+++.+++.++.++..
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999988766 9999999999999999999999999999988888
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCYVLASYAKFLW 288 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~ 288 (331)
.|++++|+.+|+++++++|+++........+..
T Consensus 99 -~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 131 (142)
T 2xcb_A 99 -LGDLDGAESGFYSARALAAAQPAHEALAARAGA 131 (142)
T ss_dssp -TTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 999999999999999999987765554444443
No 24
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.63 E-value=4.5e-15 Score=140.33 Aligned_cols=122 Identities=14% Similarity=0.052 Sum_probs=115.5
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN---------------ALLLGNYARFLKEVRGDFAKAEELCGRAILANP 239 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n---------------~~~l~nLA~~L~~~~gd~ekAee~~erALeldP 239 (331)
...++|.+|+..+++++|+.+|++++.++|++ ..++.++|.++.. .+++++|+.+|++|++++|
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~~p 227 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALELDS 227 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCC
Confidence 35678999999999999999999999999999 6999999999766 9999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHH
Q 020094 240 SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQ 298 (331)
Q Consensus 240 ~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~ 298 (331)
+++.+++++|.+++. .|++++|+.+|++|++++|++..++..++.++..+++.+++++
T Consensus 228 ~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~ 285 (336)
T 1p5q_A 228 NNEKGLSRRGEAHLA-VNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREK 285 (336)
T ss_dssp TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999999988853
No 25
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.62 E-value=1e-15 Score=128.15 Aligned_cols=103 Identities=9% Similarity=-0.035 Sum_probs=83.4
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|..+...|++++|+.+|++++..+|+++.++.++|.++.. .|++++|+.+|++|+.++|+++.++++++.+++.
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 356778888888888888888888888888888888888887655 8888888888888888888888888888887777
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHH
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCYV 279 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~v 279 (331)
.|++++|+.+|+++++++|+++..
T Consensus 102 -~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 102 -XGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp -TTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred -cCCHHHHHHHHHHHHHHCcCCCcc
Confidence 888888888888888888766544
No 26
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.62 E-value=4e-15 Score=124.61 Aligned_cols=108 Identities=11% Similarity=-0.027 Sum_probs=102.5
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 193 DAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 193 ~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
..+|++++.++|++..+++++|.++.. .|++++|+.+|++++.++|+++.+|..++.++.. .|++++|+.+|++++++
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQ-SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHH-cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 457899999999999999999999776 9999999999999999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 273 APDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 273 dP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+|+++.+++++|.+|..+|++++|...++.
T Consensus 85 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 114 (148)
T 2vgx_A 85 DIXEPRFPFHAAECLLQXGELAEAESGLFL 114 (148)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999988873
No 27
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.62 E-value=1.9e-14 Score=109.66 Aligned_cols=111 Identities=16% Similarity=0.155 Sum_probs=104.0
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|..+...+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+.+++++++.+|+++.++..++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~- 84 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF- 84 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 34678899999999999999999999999999999999999766 9999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKFLW 288 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~ 288 (331)
.|++++|+.+|+++++.+|++..++..++.+..
T Consensus 85 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 85 LNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp TTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999887753
No 28
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.62 E-value=3.8e-15 Score=129.55 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=111.2
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG-------NILS 246 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~-------~al~ 246 (331)
....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++++|+++ .++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNNQEYIATLTEGIKAVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 4566799999999999999999999999999999999999999766 9999999999999999999999 6688
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCc
Q 020094 247 LYADLIWQAHKDASRAESYFDQAVKSAPD--DCYVLASYAKFLWDAGDD 293 (331)
Q Consensus 247 ~yA~ll~~~~Gd~deA~~yfekAL~ldP~--d~~vl~~LA~~L~~lG~~ 293 (331)
.++.+++. .|++++|+.+|+++++++|+ +..++.++|.++...|+.
T Consensus 122 ~~g~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 122 KEGQKFQQ-AGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHH-hccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 88888888 99999999999999999999 999999999999999887
No 29
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.61 E-value=4.7e-15 Score=121.13 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=95.8
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 020094 198 KMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDC 277 (331)
Q Consensus 198 rAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~ 277 (331)
++..+||+.++.+.+.|..++. .|+|++|+++|++||+++|+++.+|.++|.+++. +|++++|+.+|+++++++|++.
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFK-KGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhhh
Confidence 4556899999999999999776 9999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCchHHHHhhh
Q 020094 278 YVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 278 ~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.+|+++|.++..+|++++|...++
T Consensus 82 ~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999999998887
No 30
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.61 E-value=3.5e-14 Score=122.19 Aligned_cols=127 Identities=14% Similarity=0.161 Sum_probs=103.3
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++.+|+++.++..++.++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVV-KEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34566778888888888888888888888888888888888877655 88888888888888888888888887787777
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.. .|++++|+.+|+++++.+|++..++..++.++...|++++|...++
T Consensus 136 ~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 183 (243)
T 2q7f_A 136 VK-LEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFA 183 (243)
T ss_dssp HH-TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HH-hccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 77 8888888888888888888888888888888888888888877766
No 31
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.61 E-value=2.6e-14 Score=122.93 Aligned_cols=127 Identities=13% Similarity=0.001 Sum_probs=120.7
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....++|.+|...+++++|+.+|+++++.+|.++.++..+|.++.. .|++++|+++|+++++.+|+++.++..++.++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999766 99999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+. .|++++|+.+|+++++.+|++..++..++.++...|+.++|...++
T Consensus 170 ~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 217 (243)
T 2q7f_A 170 AN-EGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLD 217 (243)
T ss_dssp HH-HTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HH-cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 88 9999999999999999999999999999999999999999998887
No 32
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.60 E-value=3.2e-15 Score=124.48 Aligned_cols=114 Identities=14% Similarity=0.097 Sum_probs=103.8
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEA------------------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN 238 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~------------------nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeld 238 (331)
.+.|..++..++|++|+.+|++++.+ +|.+..++.++|.++.. .|++++|+.+|++||+++
T Consensus 15 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~~~ 93 (162)
T 3rkv_A 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLKRE 93 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhcC
Confidence 46788999999999999999999999 77788999999999766 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCC
Q 020094 239 PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDC-YVLASYAKFLWDAGD 292 (331)
Q Consensus 239 P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~-~vl~~LA~~L~~lG~ 292 (331)
|+++.+|+.+|.+++. .|++++|+.+|+++++++|++. .+...+..+.....+
T Consensus 94 p~~~~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 94 ETNEKALFRRAKARIA-AWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp TTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHH-HhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 9999999999999999999998 777777777765543
No 33
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.60 E-value=2.2e-14 Score=123.92 Aligned_cols=127 Identities=15% Similarity=0.058 Sum_probs=118.4
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHHcCCHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIE--------------------------ANPGNALLLGNYARFLKEVRGDFAKA 227 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~--------------------------~nP~n~~~l~nLA~~L~~~~gd~ekA 227 (331)
....++|.+|...+++++|+.+|++++. .+|.++.++..+|.++.. .|++++|
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A 158 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFT-KSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH-hcCHHHH
Confidence 3467899999999999999999999999 677788899999999766 9999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 228 EELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 228 ee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+.+|+++++.+|+++.++..++.++.. .|++++|+.+|+++++.+|++..++..++.++...|+.++|...++.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 232 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDA 232 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999988 99999999999999999999999999999999999999999887763
No 34
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.60 E-value=9.7e-15 Score=116.35 Aligned_cols=116 Identities=14% Similarity=0.019 Sum_probs=105.2
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....++|..+...+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+.+|+++++++|+++.++..++.++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 34467889999999999999999999999999999999999999766 99999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHc
Q 020094 253 WQAHKDASRAESYFDQAVKSAPD-----DCYVLASYAKFLWDA 290 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~-----d~~vl~~LA~~L~~l 290 (331)
+. .|++++|+.+|+++++++|+ +..+...+..+..+.
T Consensus 88 ~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 88 LE-MESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp HH-TTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred HH-HhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHH
Confidence 98 99999999999999999997 677777776665544
No 35
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.60 E-value=1.3e-14 Score=133.90 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=113.0
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPG--NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~--n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
....+++.+|...+++++|+.+|+++++.+|+ ++.++.++|.++.. .|++++|+++|+++++++|+++.+|..++.+
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 256 (365)
T 4eqf_A 178 GLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL-SGEFNRAIDAFNAALTVRPEDYSLWNRLGAT 256 (365)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34556788899999999999999999999999 99999999999766 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhhhc
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEESQH 305 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~~ 305 (331)
+.. .|++++|+.+|+++++++|++..++.+++.++...|++++|...++....
T Consensus 257 ~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 309 (365)
T 4eqf_A 257 LAN-GDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALS 309 (365)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 998 99999999999999999999999999999999999999999988874433
No 36
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.59 E-value=1.4e-14 Score=124.42 Aligned_cols=120 Identities=11% Similarity=0.052 Sum_probs=111.4
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA----------------LLLGNYARFLKEVRGDFAKAEELCGRAILANP 239 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~----------------~~l~nLA~~L~~~~gd~ekAee~~erALeldP 239 (331)
..+.|..+...+++++|+.+|++++...|.++ .++.++|.++.. .+++++|+.+|+++++++|
T Consensus 41 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p 119 (198)
T 2fbn_A 41 IKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLKIDK 119 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCc
Confidence 56788999999999999999999999999988 899999999765 9999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHH
Q 020094 240 SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEE 297 (331)
Q Consensus 240 ~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~ 297 (331)
+++.+++.+|.+++. .|++++|+.+|+++++++|++..++..++.++...++.++++
T Consensus 120 ~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 120 NNVKALYKLGVANMY-FGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp TCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred ccHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 999999999999999999999999999999999988776665
No 37
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.59 E-value=1.9e-14 Score=117.54 Aligned_cols=126 Identities=12% Similarity=0.061 Sum_probs=119.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|.++...+++++|+.+|++++..+|.++.++..+|.++.. .+++++|+++++++++.+|+++.++..++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVK-TGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ 88 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 355788999999999999999999999999999999999999766 9999999999999999999999999999999988
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
.|++++|+.+|+++++.+|.+..++..++.++...|++++|...+++
T Consensus 89 -~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 135 (186)
T 3as5_A 89 -VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKI 135 (186)
T ss_dssp -HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988873
No 38
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.59 E-value=1.1e-14 Score=135.89 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=92.3
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....+++.+|...+++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+++|+++++++|+++.++..++.++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE-KGSVAEAEDCYNTALRLCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHH
Confidence 34456677777777777777777777777777777777777776554 77777777777777777777777777777666
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.. .|++++|+.+|+++++++|++..++.+++.++.+.|++++|...++
T Consensus 316 ~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 363 (388)
T 1w3b_A 316 RE-QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 363 (388)
T ss_dssp HT-TTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HH-cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 66 7777777777777777777777777777777777777777776666
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.59 E-value=2.2e-14 Score=116.84 Aligned_cols=105 Identities=19% Similarity=0.267 Sum_probs=92.9
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG-------NILSLYA 249 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~-------~al~~yA 249 (331)
-|++..|+..++|++|+.+|+++|+++|+++.++.++|.++.. .|++++|+++|++||+++|++. .++.++|
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999776 9999999999999999999763 4677788
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYA 284 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA 284 (331)
.++.. ++++++|+.+|++++...| ++++...+.
T Consensus 91 ~~~~~-~~~~~~A~~~~~kal~~~~-~~~~~~~l~ 123 (127)
T 4gcn_A 91 NAFQK-QNDLSLAVQWFHRSLSEFR-DPELVKKVK 123 (127)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHSC-CHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHHHHhhCc-CHHHHHHHH
Confidence 87777 9999999999999999988 555554443
No 40
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.59 E-value=8.8e-15 Score=122.69 Aligned_cols=116 Identities=10% Similarity=0.135 Sum_probs=105.0
Q ss_pred hCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH--HHH
Q 020094 185 NNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA--SRA 262 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~--deA 262 (331)
..+++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+|+++++++|+++.++..++.+++...|++ ++|
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A 100 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLW-QNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQT 100 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred hccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHH
Confidence 45889999999999999999999999999999766 999999999999999999999999999999944339998 999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 263 ESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 263 ~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.+|+++++++|++..+++.+|.++...|++++|...++
T Consensus 101 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 139 (177)
T 2e2e_A 101 RAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQ 139 (177)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 999999999999999999999999999999999998887
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.59 E-value=4.9e-15 Score=121.56 Aligned_cols=106 Identities=8% Similarity=-0.059 Sum_probs=98.4
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 020094 194 AYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSA 273 (331)
Q Consensus 194 e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ld 273 (331)
..|++++.++|++...++.+|..+.. .|++++|+.+|++++.++|+++.+|..++.+++. .|++++|+.+|+++++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQ-AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 57888999999999999999999776 9999999999999999999999999999999998 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 274 PDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 274 P~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
|+++.+++++|.+|..+|++++|.+.++
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999998887
No 42
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.58 E-value=1.2e-14 Score=117.81 Aligned_cols=101 Identities=12% Similarity=-0.020 Sum_probs=89.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|..+...|++++|+.+|+++++.+|+++.+++.+|.++.. .|++++|+.+|++|++++|+++.++..++.++..
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~- 97 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN- 97 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-
Confidence 45788999999999999999999999999999999999999776 9999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHH
Q 020094 256 HKDASRAESYFDQAVKSAPDDCY 278 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~ 278 (331)
.|++++|+.+|+++++++|++..
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHC-------
T ss_pred cCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999997653
No 43
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.58 E-value=1.1e-14 Score=141.72 Aligned_cols=125 Identities=12% Similarity=0.036 Sum_probs=116.0
Q ss_pred CCcccccchHHHHHhCCC-cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 171 GGSGFSGSNNNYSNNNHG-SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYA 249 (331)
Q Consensus 171 g~~~~~~N~A~~y~s~gd-~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA 249 (331)
.+.-...|++.+|...++ +++|+.+|+++|+++|+++.+|+++|.++.. .|++++|+.+|++||+++|++..+|.+++
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 455567889999999996 9999999999999999999999999999766 99999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCchHHH
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD-AGDDEEEE 297 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~-lG~~eEa~ 297 (331)
.++.. .|++++|+.+|+++|+++|++..+|.+++.+|.. .+..++|.
T Consensus 208 ~~~~~-~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~ 255 (382)
T 2h6f_A 208 WVIQE-FKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAV 255 (382)
T ss_dssp HHHHH-HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHH
T ss_pred HHHHH-cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHH
Confidence 99998 9999999999999999999999999999999999 55547773
No 44
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.58 E-value=3.6e-14 Score=129.87 Aligned_cols=126 Identities=11% Similarity=0.012 Sum_probs=82.4
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....++|.+|...+++++|+.+|++++..+|+++.++.++|.++.. .|++++|+.+|+++++++|+++.++..++.++.
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-GNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 3445666666666666666666666666666666666666666544 666666666666666666666666666666666
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDD-----------CYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d-----------~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
. .|++++|+.+|+++++++|++ ..+|..++.++..+|+.+++....+
T Consensus 297 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 354 (368)
T 1fch_A 297 N-LGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADA 354 (368)
T ss_dssp H-HTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHT
T ss_pred H-CCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHH
Confidence 5 666666666666666666655 5666666666666666666665544
No 45
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.1e-13 Score=110.32 Aligned_cols=116 Identities=16% Similarity=0.062 Sum_probs=106.8
Q ss_pred CCcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 020094 171 GGSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSL 247 (331)
Q Consensus 171 g~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n---~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~ 247 (331)
.......++|..+...+++++|+.+|+++++.+|++ ..++.++|.++.. .+++++|+.+|+++++++|+++.++..
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 344557789999999999999999999999999998 8899999999766 999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 248 YADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLW 288 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~ 288 (331)
++.+++. .|++++|+.+|+++++++|++..++..++.+..
T Consensus 105 ~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 105 RSQALEK-LGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred HHHHHHH-cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 9999988 999999999999999999999999988887754
No 46
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.57 E-value=6.6e-14 Score=122.01 Aligned_cols=126 Identities=18% Similarity=0.233 Sum_probs=110.7
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL--ANPSDGNILSLYADL 251 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe--ldP~d~~al~~yA~l 251 (331)
....++|.+|...+++++|+.+|+++++.+|+++.++..+|.++.. .|++++|+++|+++++ .+|.++.++..++.+
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~ 150 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE-QKRYEEAYQRLLEASQDTLYPERSRVFENLGLV 150 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhCccCcccHHHHHHHHHH
Confidence 3466788889999999999999999999999999999999888665 8999999999999998 888888888888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
++. .|++++|+.+|+++++.+|.+..++..++.++...|++++|...++
T Consensus 151 ~~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 199 (252)
T 2ho1_A 151 SLQ-MKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYD 199 (252)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 887 8999999999999999999889999999999999999999888777
No 47
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.57 E-value=7.7e-14 Score=117.96 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=61.0
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAH- 256 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~- 256 (331)
++|.+|...+++++|+.+|+++++.+|+++.++..+|.++.. .|++++|+++|+++++++|++..++..++.++.. .
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~ 90 (225)
T 2vq2_A 13 QLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RL 90 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hc
Confidence 344455555555555555555555555555555555544333 4555555555555555555555555444444444 4
Q ss_pred CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 257 KDASRAESYFDQAVK--SAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 257 Gd~deA~~yfekAL~--ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
|++++|+.+|+++++ ..|.+..++..++.++...|++++|...++
T Consensus 91 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 137 (225)
T 2vq2_A 91 NRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLK 137 (225)
T ss_dssp CCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 555555555555555 333444455555555555555555544443
No 48
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.57 E-value=1.5e-14 Score=127.16 Aligned_cols=124 Identities=10% Similarity=0.104 Sum_probs=111.7
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN----ILSLYAD 250 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~----al~~yA~ 250 (331)
...++|.++...+++++|+.+|+++++.+|+++.++..+|.++.. .|++++|+++|+++++ .|.++. ++..++.
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~ 82 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYE-LAKYDLAQKDIETYFS-KVNATKAKSADFEYYGK 82 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHH-TTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999998665 9999999999999999 554443 4778888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 251 LIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 251 ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++. .|++++|+.+|+++++++|.+..++..+|.++...|++++|...++
T Consensus 83 ~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 132 (272)
T 3u4t_A 83 ILMK-KGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYME 132 (272)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHG
T ss_pred HHHH-cccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 8888 9999999999999999999999999999999999999999998887
No 49
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.57 E-value=6.1e-14 Score=122.25 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=120.3
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++++|++..++..++.++.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQT-EMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999999999999766 999999999999999999999999999999998
Q ss_pred HHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 254 QAHKDASRAESYFDQAVK--SAPDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~--ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
. .|++++|+.+|+++++ ..|.+..++..++.++...|++++|...+++.
T Consensus 117 ~-~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 167 (252)
T 2ho1_A 117 E-QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKS 167 (252)
T ss_dssp H-TTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred H-HhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 8 9999999999999999 88999999999999999999999999888743
No 50
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.57 E-value=5.2e-14 Score=120.22 Aligned_cols=122 Identities=11% Similarity=0.024 Sum_probs=112.9
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|..|...+++++|+.+|++++ +| ++.++.++|.++.. .|++++|+++|+++++++|+++.++.++|.+++.
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~- 83 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTI-LKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ- 83 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-
Confidence 4578999999999999999999995 44 78999999999766 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDC----------------YVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~----------------~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
.|++++|+.+|++++++.|.+. .+++++|.++...|++++|...++.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 146 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLAL 146 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9999999999999999988776 9999999999999999999887773
No 51
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.57 E-value=8.1e-14 Score=117.83 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=113.9
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-GDFAKAEELCGRAIL--ANPSDGNILSLYADL 251 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~-gd~ekAee~~erALe--ldP~d~~al~~yA~l 251 (331)
...+++.+|...+++++|+.+|++++..+|+++.++..+|.++.. . +++++|+.+|+++++ .+|.+..++..++.+
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 456788999999999999999999999999999999999988765 8 999999999999999 677778999889888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+.. .|++++|+.+|+++++.+|.+..++..++.++...|++++|...+++
T Consensus 123 ~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 172 (225)
T 2vq2_A 123 SAK-QGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKK 172 (225)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 888 99999999999999999999999999999999999999999887773
No 52
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.57 E-value=7.1e-14 Score=130.35 Aligned_cols=126 Identities=20% Similarity=0.192 Sum_probs=108.1
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....+++.++...+++++|+.+|++++..+|+++.++.++|.++.. .|++++|+++|+++++++|+++.++..++.++.
T Consensus 204 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 282 (388)
T 1w3b_A 204 DAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYE-QGLIDLAIDTYRRAIELQPHFPDAYCNLANALK 282 (388)
T ss_dssp HHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 3456778888888888888888888888888888888888888665 888888999999998888888888888888887
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
. .|++++|+.+|+++++++|.+..++.+++.++...|+.++|...++
T Consensus 283 ~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 329 (388)
T 1w3b_A 283 E-KGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYR 329 (388)
T ss_dssp H-HSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred H-cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 7 8889999999999998888888888888988888888888888777
No 53
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.56 E-value=1.1e-13 Score=123.69 Aligned_cols=128 Identities=15% Similarity=0.063 Sum_probs=118.4
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++++|+++.++..++.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 345677899999999999999999999999999999999999999766 9999999999999999999999999999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPD------------DCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~------------d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.. .|++++|+.+|+++++++|+ +..++..++.++...|+.++|...++
T Consensus 250 ~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 310 (327)
T 3cv0_A 250 YSN-MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYA 310 (327)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHH-hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 888 99999999999999999998 78999999999999999999988776
No 54
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.56 E-value=1.9e-13 Score=107.67 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=102.7
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNILSLYA 249 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~---~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d---~~al~~yA 249 (331)
..+.|..+...+++++|+.+|++++..+|+++ .+++.+|.++.. .|++++|+.+|+++++.+|++ +.+++.++
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 35788999999999999999999999999998 799999999776 999999999999999999999 89999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAG 291 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG 291 (331)
.+++. .|++++|+.+|+++++..|++..+......+-...+
T Consensus 84 ~~~~~-~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 84 LSQYG-EGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHHH-cCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 99998 999999999999999999999988776666554443
No 55
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.55 E-value=7e-14 Score=139.31 Aligned_cols=130 Identities=12% Similarity=0.066 Sum_probs=122.1
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.....++|.+|...+++++|+++|+++++++|+++.++.++|.++.. .|++++|+++|++|++++|+++.++.+++.+
T Consensus 22 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~la~~ 100 (568)
T 2vsy_A 22 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWT-QQRHAEAAVLLQQASDAAPEHPGIALWLGHA 100 (568)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 344577899999999999999999999999999999999999999766 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc---CCchHHHHhhhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA---GDDEEEEQDNEES 303 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l---G~~eEa~~~~~~~ 303 (331)
+.. .|++++|+.+|+++++++|++..++.+++.++... |+.++|...+++.
T Consensus 101 ~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 101 LED-AGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAA 154 (568)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 998 99999999999999999999999999999999999 9999998877733
No 56
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.55 E-value=2.8e-14 Score=140.66 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=111.2
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGN---------------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS 240 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n---------------~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~ 240 (331)
..++|..|+..++|++|+.+|+++++++|++ ..+++++|.++.. .++|++|+.+|++||+++|+
T Consensus 271 ~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~~p~ 349 (457)
T 1kt0_A 271 VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALGLDSA 349 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCc
Confidence 4578899999999999999999999999999 6899999999766 99999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHh
Q 020094 241 DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQD 299 (331)
Q Consensus 241 d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~ 299 (331)
++.+|+++|.+++. ++++++|+.+|++|++++|++..++..++.++.++++.+++++.
T Consensus 350 ~~~a~~~~g~a~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 350 NEKGLYRRGEAQLL-MNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 99999999999999999999999999999999999999888753
No 57
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.55 E-value=1.1e-13 Score=123.85 Aligned_cols=126 Identities=12% Similarity=0.068 Sum_probs=103.6
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN---------PSDGNI 244 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeld---------P~d~~a 244 (331)
....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|++++++. |.++.+
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 238 (330)
T 3hym_B 160 LPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ-NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPL 238 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cccHHHHHHHHHHHHHHhhhccccccccHHHHH
Confidence 3456678888888888888888888888888888888888887665 888888888888888876 667778
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 245 l~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+..++.++.. .|++++|+.+|+++++++|++..++..++.++...|++++|...++
T Consensus 239 ~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 294 (330)
T 3hym_B 239 LNNLGHVCRK-LKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFH 294 (330)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHH
Confidence 8788887777 8888888888888888888888888888888888888888887777
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.55 E-value=2.1e-14 Score=148.35 Aligned_cols=128 Identities=9% Similarity=-0.055 Sum_probs=122.1
Q ss_pred CCcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 171 GGSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (331)
Q Consensus 171 g~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ 250 (331)
.+.....++|.+|...+++++|+.+|+++++.+|+++.+++++|.++.. .|++++|+++|++|++++|+++.++.+++.
T Consensus 431 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~lg~ 509 (681)
T 2pzi_A 431 ESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-TGDYDSATKHFTEVLDTFPGELAPKLALAA 509 (681)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTCSHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 4555678899999999999999999999999999999999999999776 999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 251 LIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 251 ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
++.. .|++++ +.+|++|++++|++..+++++|.++..+|++++|...++
T Consensus 510 ~~~~-~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 510 TAEL-AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLD 558 (681)
T ss_dssp HHHH-HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHH-cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9998 999999 999999999999999999999999999999999999998
No 59
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.55 E-value=1.2e-13 Score=127.48 Aligned_cols=125 Identities=18% Similarity=0.125 Sum_probs=77.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP--------------- 239 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP--------------- 239 (331)
...++|.+|...+++++|+.+|+++++++|+++.++.++|.++.. .|++++|+++|+++++++|
T Consensus 101 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 179 (365)
T 4eqf_A 101 AWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTN-TSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGL 179 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCHHHHCC----------
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc-cccHHHHHHHHHHHHHhCccchHHHhhhccchHH
Confidence 345666666666666666666666666666666666666665443 5555555555555444433
Q ss_pred -----------------------------C--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 240 -----------------------------S--DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLW 288 (331)
Q Consensus 240 -----------------------------~--d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~ 288 (331)
+ ++.++..++.++.. .|++++|+.+|+++++++|++..++.+++.++.
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 258 (365)
T 4eqf_A 180 TRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL-SGEFNRAIDAFNAALTVRPEDYSLWNRLGATLA 258 (365)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 2 55566666665555 666666666666666666666666666666666
Q ss_pred HcCCchHHHHhhh
Q 020094 289 DAGDDEEEEQDNE 301 (331)
Q Consensus 289 ~lG~~eEa~~~~~ 301 (331)
..|++++|...++
T Consensus 259 ~~g~~~~A~~~~~ 271 (365)
T 4eqf_A 259 NGDRSEEAVEAYT 271 (365)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 6666666666555
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.54 E-value=6.6e-14 Score=120.84 Aligned_cols=129 Identities=14% Similarity=0.135 Sum_probs=119.0
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN-------ALLLGNYARFLKEVRGDFAKAEELCGRAIL--------- 236 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n-------~~~l~nLA~~L~~~~gd~ekAee~~erALe--------- 236 (331)
.....++|.+|...+++++|+.+|++++..+|++ +.++..+|.++.. .+++++|+++|+++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~ 116 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHK-LGDLKKTIEYYQKSLTEHRTADILT 116 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHhcCchhHHHH
Confidence 3456789999999999999999999999999987 7999999999766 9999999999999999
Q ss_pred -----------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHh
Q 020094 237 -----------------ANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQD 299 (331)
Q Consensus 237 -----------------ldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~ 299 (331)
.+|+++.++..++.+++. .|++++|+.+|+++++.+|.+..++..+|.++...|++++|...
T Consensus 117 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 195 (258)
T 3uq3_A 117 KLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFT-KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIAD 195 (258)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHH
Confidence 777888999999999988 99999999999999999999999999999999999999999988
Q ss_pred hhhh
Q 020094 300 NEES 303 (331)
Q Consensus 300 ~~~~ 303 (331)
++..
T Consensus 196 ~~~a 199 (258)
T 3uq3_A 196 CNKA 199 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8733
No 61
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.54 E-value=9.2e-14 Score=107.73 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=104.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD-------GNILSLY 248 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d-------~~al~~y 248 (331)
..++|..+...+++++|+.+|++++..+|.++.++.++|.++.. .+++++|+.+|++++.++|++ +.++..+
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRENREDYRQIAKAYARI 85 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccccchhHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999766 999999999999999999987 9999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 020094 249 ADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGD 292 (331)
Q Consensus 249 A~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~ 292 (331)
+.+++. .|++++|+.+|+++++++| +..++..++.++..+++
T Consensus 86 a~~~~~-~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 86 GNSYFK-EEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 999988 9999999999999999999 78888888888776544
No 62
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.54 E-value=2.3e-14 Score=141.49 Aligned_cols=124 Identities=12% Similarity=0.024 Sum_probs=79.3
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR---------GDFAKAEELCGRAILANPSDGNIL 245 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~---------gd~ekAee~~erALeldP~d~~al 245 (331)
...++|.+|...+++++|+.+|+++++++|+ +.++.++|.++.. . +++++|+++|++|++++|+++.+|
T Consensus 139 a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 139 AWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 4455666666666666666666666666666 5666666665443 5 666666666666666666666666
Q ss_pred HHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 246 SLYADLIWQAH--------KDASRAESYFDQAVKSAP---DDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 246 ~~yA~ll~~~~--------Gd~deA~~yfekAL~ldP---~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
..++.++.. . |++++|+.+|++|++++| ++..+|.++|.+|...|++++|...++
T Consensus 217 ~~lg~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 282 (474)
T 4abn_A 217 YILGNAYLS-LYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 282 (474)
T ss_dssp HHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHH-HHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 666666655 5 666666666666666666 666666666666666666666665554
No 63
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.54 E-value=1.2e-13 Score=123.46 Aligned_cols=131 Identities=13% Similarity=0.023 Sum_probs=121.2
Q ss_pred cccccchHHHHHhCC-CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNH-GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 173 ~~~~~N~A~~y~s~g-d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
.....+++.+|...+ ++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++++|++..++..++.+
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 168 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV-ESEHDQAMAAYFTAAQLMKGCHLPMLYIGLE 168 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHTTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 345678899999999 99999999999999999999999999999766 9999999999999999999999999999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhhhc
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEESQH 305 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~~ 305 (331)
+.. .|++++|+.+|+++++.+|++..++..++.++...|++++|...+++...
T Consensus 169 ~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 221 (330)
T 3hym_B 169 YGL-TNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALE 221 (330)
T ss_dssp HHH-TTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHH-HhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 888 99999999999999999999999999999999999999999988874443
No 64
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.54 E-value=2.4e-13 Score=118.99 Aligned_cols=125 Identities=9% Similarity=0.036 Sum_probs=112.7
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|+++++++|+++.++..++.+++
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~ 122 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNFDAAYEAFDSVLELDPTYNYAHLNRGIALY 122 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCccccHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999766 999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
. .|++++|+.+|+++++++|++......++.+ ...|+.++|...++
T Consensus 123 ~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~ 168 (275)
T 1xnf_A 123 Y-GGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLK 168 (275)
T ss_dssp H-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHH
T ss_pred H-hccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHH
Confidence 8 9999999999999999999998766666544 55689999987775
No 65
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.53 E-value=3.8e-14 Score=139.96 Aligned_cols=128 Identities=9% Similarity=-0.012 Sum_probs=120.8
Q ss_pred CcccccchHHHHHhCCCc-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGS-SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~-ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ 250 (331)
......++|.+|...+++ ++|+.+|+++++++|+++.++.++|.++.. .|++++|+++|++|++++|+ +.++..++.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWK-KGDVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 455678999999999999 999999999999999999999999999776 99999999999999999999 799999999
Q ss_pred HHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------CCchHHHHhhhh
Q 020094 251 LIWQAH---------KDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA--------GDDEEEEQDNEE 302 (331)
Q Consensus 251 ll~~~~---------Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l--------G~~eEa~~~~~~ 302 (331)
+++. . |++++|+.+|++|++++|++..+|.++|.+|... |++++|...++.
T Consensus 179 ~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 179 VLRQ-LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQ 246 (474)
T ss_dssp HHTT-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHH-hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 9988 8 9999999999999999999999999999999999 999999988873
No 66
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.53 E-value=2.3e-14 Score=113.83 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=91.8
Q ss_pred CCCcHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 020094 186 NHGSSSTDAYYEKMIEA---NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRA 262 (331)
Q Consensus 186 ~gd~ekA~e~yerAL~~---nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA 262 (331)
.|++++|+.+|++++++ +|+++.++.++|.++.. .|++++|+.+|+++++++|+++.++.+++.+++. .|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 47899999999999999 69999999999999776 9999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 020094 263 ESYFDQAVKSAPDDCYVLASYAKFLWDAGDD 293 (331)
Q Consensus 263 ~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~ 293 (331)
+.+|+++++..|++..+......+..-.+..
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai~~~~~~l 111 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAILFYADKL 111 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHHHHHTTCT
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999998876555555444433
No 67
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.53 E-value=8.2e-14 Score=122.48 Aligned_cols=124 Identities=12% Similarity=0.123 Sum_probs=113.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|.+|...+++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+++|+++++++|+++.++..++..++.
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~- 154 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN-KGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY- 154 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-ccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-
Confidence 56899999999999999999999999999999999999999766 9999999999999999999999999999856666
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC---chHHHHhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGD---DEEEEQDNE 301 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~---~eEa~~~~~ 301 (331)
.+++++|+.+|+++++++|++..++..++.++...++ .++|...++
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 203 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYE 203 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHH
Confidence 7799999999999999999999999999999999998 766776665
No 68
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.52 E-value=1.8e-13 Score=125.19 Aligned_cols=124 Identities=10% Similarity=0.093 Sum_probs=115.9
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPG--NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~--n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
+++.++ ..+++++|+.+|++++..+|+ ++.++.++|.++.. .|++++|+.+|+++++++|+++.++..++.++..
T Consensus 187 ~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~- 263 (368)
T 1fch_A 187 ILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNL-SGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN- 263 (368)
T ss_dssp TTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-
Confidence 566666 889999999999999999999 89999999999766 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEESQ 304 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~ 304 (331)
.|++++|+.+|+++++++|++..++..+|.++...|++++|...++...
T Consensus 264 ~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 312 (368)
T 1fch_A 264 GNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEAL 312 (368)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887433
No 69
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.52 E-value=6.9e-14 Score=134.96 Aligned_cols=122 Identities=18% Similarity=0.125 Sum_probs=114.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIE----------------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP 239 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~----------------~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP 239 (331)
..++|..|...+++++|+.+|+++++ .+|.++.++.++|.++.. .+++++|+++|++|++++|
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHhCc
Confidence 45789999999999999999999999 788899999999999766 9999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHh
Q 020094 240 SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQD 299 (331)
Q Consensus 240 ~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~ 299 (331)
+++.+++.+|.+++. +|++++|+.+|++|++++|++..++..++.++..+++.+++.+.
T Consensus 305 ~~~~a~~~lg~~~~~-~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 305 SNTKALYRRAQGWQG-LKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 99999999999999999999999999999999999988877643
No 70
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.51 E-value=3.2e-14 Score=120.48 Aligned_cols=124 Identities=18% Similarity=0.075 Sum_probs=100.6
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..+.|..+...|++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+.+|++++..+| ++.++..++.+.+..
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~ 86 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLE-TKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQ 86 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHH-TTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-CCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHh
Confidence 34677888889999999999999999999999999999988665 8999999999998888888 877765555443332
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.++..+|+.+|+++++++|++..+++.+|.++...|++++|...++
T Consensus 87 ~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~ 132 (176)
T 2r5s_A 87 QAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLW 132 (176)
T ss_dssp HHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 3344567888888888888888888888888888888888887776
No 71
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.51 E-value=2.8e-13 Score=102.52 Aligned_cols=102 Identities=12% Similarity=0.023 Sum_probs=84.3
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS--DGNILSLYAD 250 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~--d~~al~~yA~ 250 (331)
.....++|.++...+++++|+.+|+++++.+|.++.++.++|.++.. .+++++|+++|+++++++|+ +..++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 34556788888888888888888888888888888888888888665 88888888888888888888 8888888888
Q ss_pred HHHHHc-CCHHHHHHHHHHHHHhCCCC
Q 020094 251 LIWQAH-KDASRAESYFDQAVKSAPDD 276 (331)
Q Consensus 251 ll~~~~-Gd~deA~~yfekAL~ldP~d 276 (331)
++.. . |++++|+.+|++++...|.+
T Consensus 85 ~~~~-~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 85 ALRY-IEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHTT-CSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHH-HhCCHHHHHHHHHHHhhcccCC
Confidence 7777 8 88888888888888888754
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.51 E-value=3.4e-13 Score=121.38 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=117.2
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|..+...|++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|+++++++|+++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~- 83 (359)
T 3ieg_A 6 HLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLA-MGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK- 83 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-
Confidence 34678999999999999999999999999999999999999776 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCC---CCHHHHHHH------------HHHHHHcCCchHHHHhhhh
Q 020094 256 HKDASRAESYFDQAVKSAP---DDCYVLASY------------AKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP---~d~~vl~~L------------A~~L~~lG~~eEa~~~~~~ 302 (331)
.|++++|+.+|+++++++| ++..++..+ +.++...|++++|...++.
T Consensus 84 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 145 (359)
T 3ieg_A 84 QGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDK 145 (359)
T ss_dssp HTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9999999999999999999 899988888 7999999999999888773
No 73
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.51 E-value=2.9e-14 Score=141.79 Aligned_cols=124 Identities=19% Similarity=0.098 Sum_probs=111.7
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|..|...+++++|+++|+++++++|+++.++.++|.++.. .+++++|+++|++|++++|+++.++.++|.+++.
T Consensus 9 ~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~- 86 (477)
T 1wao_1 9 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAASNMA- 86 (477)
T ss_dssp SSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-
Confidence 34667778889999999999999999999999999999999766 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHcCCchHHHHhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKF--LWDAGDDEEEEQDNE 301 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~--L~~lG~~eEa~~~~~ 301 (331)
+|++++|+.+|++|++++|++..++..++.+ +.+.+++++|.+.++
T Consensus 87 ~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 87 LGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999988 888899988887765
No 74
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.50 E-value=7.7e-13 Score=122.55 Aligned_cols=125 Identities=10% Similarity=-0.069 Sum_probs=110.1
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLK-EVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~-~~~gd~ekAee~~erALeldP~d~~al~~yA~ 250 (331)
+.....+++.+|...|++++|+.+|+++++.+|++.......+.+.. ...+++++|+.+|+++++.+|+++.+++.++.
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~ 208 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAA 208 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 44567789999999999999999999999999998765544443222 22488999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHH
Q 020094 251 LIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEE 297 (331)
Q Consensus 251 ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~ 297 (331)
++.. .|++++|+.+|+++++++|+++.++.+++.++...|+..++.
T Consensus 209 ~~~~-~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 209 CHMA-QGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 9998 999999999999999999999999999999999999997753
No 75
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.50 E-value=1.3e-13 Score=120.36 Aligned_cols=123 Identities=10% Similarity=0.078 Sum_probs=106.0
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..++|.+|...+++++|+.+|+++++++|+++.++.++|.++.. .|++++|+++|+++++++|+++.++.+++.+++.
T Consensus 57 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~- 134 (208)
T 3urz_A 57 ATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVC-RGQEKDALRMYEKILQLEADNLAANIFLGNYYYL- 134 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-
Confidence 44599999999999999999999999999999999999999776 9999999999999999999999999999999876
Q ss_pred cC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 256 HK--DASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 256 ~G--d~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.+ +.+++...|++++..+| ....++.++.++...+++++|...++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~g~~~~~~~~~~~A~~~~~ 181 (208)
T 3urz_A 135 TAEQEKKKLETDYKKLSSPTK-MQYARYRDGLSKLFTTRYEKARNSLQ 181 (208)
T ss_dssp HHHHHHHHHHHHHC---CCCH-HHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCCc-hhHHHHHHHHHHHHccCHHHHHHHHH
Confidence 44 45677888888865433 34577888999999999999998887
No 76
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.49 E-value=3.6e-13 Score=123.94 Aligned_cols=126 Identities=12% Similarity=0.002 Sum_probs=83.3
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....++|..+...|++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+.+|++++..+|++...+...+..+.
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~ 196 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELL 196 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999999999999765 899988877766665555533333322222222
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
. .++.++|+..|+++++++|++..+++++|.+|...|++++|...++
T Consensus 197 ~-~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~ 243 (287)
T 3qou_A 197 X-QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF 243 (287)
T ss_dssp H-HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred h-hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 2 4444445555555555555555555555555555555555544443
No 77
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.49 E-value=1.2e-13 Score=116.95 Aligned_cols=128 Identities=9% Similarity=-0.029 Sum_probs=111.9
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.....++|.+|...|++++|+.+|++++..+| ++.++..++.+......+..+|+.+|+++++++|+++.+++.++.+
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~ 117 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQ 117 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 444567899999999999999999999999999 8887776665533323344568999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDD--CYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d--~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.. .|++++|+.+|+++++++|+. ..++..++.++...|+.+++...++
T Consensus 118 ~~~-~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~ 168 (176)
T 2r5s_A 118 YNQ-VGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYR 168 (176)
T ss_dssp HHH-TTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHH-cccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 998 999999999999999999965 6699999999999999999988876
No 78
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.49 E-value=5.5e-14 Score=123.16 Aligned_cols=116 Identities=17% Similarity=0.141 Sum_probs=108.1
Q ss_pred hCCCcHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 020094 185 NNHGSSSTDAYYEKMIEA----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~----nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~d 260 (331)
..+++++|+.+|+++++. +|.++.++..+|.++.. .|++++|+.+|+++++++|+++.++..++.+++. .|+++
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~ 94 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDS-LGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNFD 94 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH-cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCHH
Confidence 457899999999999998 35678899999999766 9999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 261 RAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 261 eA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+|+.+|+++++++|.+..++..+|.++...|++++|...++.
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 136 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLA 136 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 999999999999999999999999999999999999988873
No 79
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.48 E-value=4.9e-13 Score=106.20 Aligned_cols=96 Identities=13% Similarity=0.003 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 020094 204 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASY 283 (331)
Q Consensus 204 P~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~L 283 (331)
|.++..+..+|..++. .|++++|+.+|+++++++|+++.+|.+++.+++. .|++++|+.+|+++++++|++..+++.+
T Consensus 1 p~~a~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (126)
T 3upv_A 1 SMKAEEARLEGKEYFT-KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRK 78 (126)
T ss_dssp CHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4456788899988776 9999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHcCCchHHHHhhh
Q 020094 284 AKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 284 A~~L~~lG~~eEa~~~~~ 301 (331)
|.++...|++++|...++
T Consensus 79 g~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 79 ATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHH
Confidence 999999999999998887
No 80
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.48 E-value=5.3e-13 Score=120.06 Aligned_cols=126 Identities=14% Similarity=0.066 Sum_probs=98.3
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHH--
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP---SDGNILSLY-- 248 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP---~d~~al~~y-- 248 (331)
....++|.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|+++++++| +++.++..+
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (359)
T 3ieg_A 38 IAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK 116 (359)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChHHHHHHHHHHHhcCCcccChHHHHHHHHH
Confidence 3456778888888888888888888888888888888888877655 7888888888888888888 777777666
Q ss_pred ----------HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 249 ----------ADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 249 ----------A~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.+++. .|++++|+.+|+++++.+|.+..++..++.++...|++++|...++
T Consensus 117 ~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 178 (359)
T 3ieg_A 117 ADEMQRLRSQALDAFD-GADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLK 178 (359)
T ss_dssp HHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 455555 7888888888888888888778888888888888888877777666
No 81
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.48 E-value=4.6e-13 Score=119.20 Aligned_cols=131 Identities=14% Similarity=-0.005 Sum_probs=115.9
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNIL 245 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n---~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d---~~al 245 (331)
..-...+.|..+...+++++|+.+|++++..+|++ +.+++.+|.+++. .|++++|+.+|+++++++|++ +.++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 44557889999999999999999999999999999 9999999999776 999999999999999998854 5678
Q ss_pred HHHHHHHHHH-------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCchHHHHhhh
Q 020094 246 SLYADLIWQA-------HKDASRAESYFDQAVKSAPDDCYVL-----------------ASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 246 ~~yA~ll~~~-------~Gd~deA~~yfekAL~ldP~d~~vl-----------------~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.++.+++.. .|++++|+.+|+++++.+|++..+. +.+|.+|...|++++|...++
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 172 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYE 172 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 7777766532 7999999999999999999887666 888999999999999999887
Q ss_pred hh
Q 020094 302 ES 303 (331)
Q Consensus 302 ~~ 303 (331)
..
T Consensus 173 ~~ 174 (261)
T 3qky_A 173 AV 174 (261)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 82
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.48 E-value=2.8e-13 Score=124.75 Aligned_cols=128 Identities=13% Similarity=0.144 Sum_probs=111.9
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL-LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~-~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
.....+++.++...+++++|..+|+++++++|.++. ++.+|+.++.. .|++++|+.+|++|++.+|.+..+|..++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFKKAREDARTRHHVYVTAALM 177 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHHHHHHTSTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 345678999999999999999999999999999987 89999988765 8999999999999999999888888666665
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.+...|++++|+.+|+++++++|++..+|..++.++...|+.++|...++
T Consensus 178 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~ 227 (308)
T 2ond_A 178 EYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFE 227 (308)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 55436899999999999999999999999999999999999999988887
No 83
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.47 E-value=1.4e-13 Score=120.29 Aligned_cols=110 Identities=13% Similarity=0.054 Sum_probs=98.7
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPG-------NAL-----LLGNYARFLKEVRGDFAKAEELCGRAILA------ 237 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~-------n~~-----~l~nLA~~L~~~~gd~ekAee~~erALel------ 237 (331)
..|.+..++..|+|++|+.+|+++|+++|+ +.. +|.++|.++.. +|+|++|+.+|++||++
T Consensus 14 ~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 14 ALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhhcccc
Confidence 457888999999999999999999999999 444 99999999776 99999999999999999
Q ss_pred -CCCCHHHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 238 -NPSDGNIL----SLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFL 287 (331)
Q Consensus 238 -dP~d~~al----~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L 287 (331)
+|+++.+| ++.+.++.. +|++++|+.+|++|++++|++..+.-.+..+.
T Consensus 93 ~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~ 146 (159)
T 2hr2_A 93 LNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVEMIEERKGETPGKERMM 146 (159)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHH
T ss_pred CCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999999 999999998 99999999999999999998876655554443
No 84
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.47 E-value=6e-13 Score=111.43 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=99.0
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDF--AKAEELCGRAILANPSDGNILSLYA 249 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~--ekAee~~erALeldP~d~~al~~yA 249 (331)
+.....++|.+|...+++++|+.+|++++..+|+++.++.++|.+++...+++ ++|+.+|+++++++|+++.++..++
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 34457789999999999999999999999999999999999999955458998 9999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAPDDCYVL 280 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl 280 (331)
.+++. .|++++|+.+|+++++++|.+....
T Consensus 123 ~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 123 SDAFM-QANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHHH-cccHHHHHHHHHHHHhhCCCCccHH
Confidence 99998 9999999999999999999876543
No 85
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.47 E-value=5.4e-13 Score=119.12 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=112.0
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 020094 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRA 262 (331)
Q Consensus 183 y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA 262 (331)
+...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++.+|+++.++..++.++.. .|++++|
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A 225 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNL-SNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEA 225 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHH
Confidence 4456789999999999999999999999999999766 9999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 263 ESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 263 ~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
+.+|+++++.+|++..++..++.++...|++++|.+.++..
T Consensus 226 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 266 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRA 266 (327)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888733
No 86
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.47 E-value=7.9e-13 Score=127.11 Aligned_cols=128 Identities=16% Similarity=0.144 Sum_probs=117.5
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....+++.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+++|+++++++|+++.++..++.+++
T Consensus 277 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 355 (537)
T 3fp2_A 277 NSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFI-LQDYKNAKEDFQKAQSLNPENVYPYIQLACLLY 355 (537)
T ss_dssp HHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3456788899999999999999999999999999999999998766 999999999999999999999999999999988
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
. .|++++|+.+|+++++.+|++..++..++.++...|++++|...++..
T Consensus 356 ~-~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 404 (537)
T 3fp2_A 356 K-QGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIA 404 (537)
T ss_dssp H-TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred H-cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8 999999999999999999999999999999999999999998887743
No 87
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.46 E-value=4e-13 Score=101.58 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=93.0
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHH
Q 020094 202 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD--DCYV 279 (331)
Q Consensus 202 ~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~--d~~v 279 (331)
++|+++.++..+|.++.. .+++++|+.+|+++++++|++..++..++.+++. .|++++|+.+|+++++.+|. +..+
T Consensus 1 l~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYD-AGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCSSTTGGGGHHHHHHS-SCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCCcHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcccchHHH
Confidence 378899999999999765 9999999999999999999999999999999998 99999999999999999999 9999
Q ss_pred HHHHHHHHHHc-CCchHHHHhhh
Q 020094 280 LASYAKFLWDA-GDDEEEEQDNE 301 (331)
Q Consensus 280 l~~LA~~L~~l-G~~eEa~~~~~ 301 (331)
+..++.++... |++++|.+.++
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~ 101 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEA 101 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999 99999998887
No 88
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.46 E-value=4.4e-13 Score=133.53 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=92.3
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 020094 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYF 266 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yf 266 (331)
+++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+++|++|++++|+++.++..++.+++. +|++++|+.+|
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 80 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELG-MGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWT-QQRHAEAAVLL 80 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 688999999999999999999999999999776 9999999999999999999999999999999998 99999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 267 DQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 267 ekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+++++++|++..++.++|.+|...|++++|...+++
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 116 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTR 116 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999999999988873
No 89
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.46 E-value=1.8e-12 Score=103.04 Aligned_cols=101 Identities=14% Similarity=0.050 Sum_probs=93.2
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 201 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVL 280 (331)
Q Consensus 201 ~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl 280 (331)
..+|.++..+..+|.+++. .+++++|+.+|++++.++|+++.++..++.+++. .|++++|+.+|+++++++|++..++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFV-GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchhHHHH
Confidence 4578899999999999776 9999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCchHHHHhhhhh
Q 020094 281 ASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 281 ~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
+.+|.++...|++++|...++..
T Consensus 81 ~~l~~~~~~~~~~~~A~~~~~~a 103 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIANLQRA 103 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999877733
No 90
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.46 E-value=2e-13 Score=119.29 Aligned_cols=98 Identities=20% Similarity=0.189 Sum_probs=87.2
Q ss_pred hCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 185 NNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd----------~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
+.+.+++|+..|+++++++|+++++++++|.++.. .++ +++|+..|++||+++|++..+|++++.++..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 44678999999999999999999999999998766 555 4699999999999999999999999999987
Q ss_pred Hc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 255 AH-----------KDASRAESYFDQAVKSAPDDCYVLASYA 284 (331)
Q Consensus 255 ~~-----------Gd~deA~~yfekAL~ldP~d~~vl~~LA 284 (331)
+ |++++|+.+|++|++++|++...+..+.
T Consensus 93 -lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~ 132 (158)
T 1zu2_A 93 -FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLE 132 (158)
T ss_dssp -HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred -hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5 4899999999999999999876655544
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.45 E-value=8.3e-13 Score=116.23 Aligned_cols=126 Identities=10% Similarity=-0.018 Sum_probs=107.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHH-----------------cCCHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL---LLGNYARFLKEV-----------------RGDFAKAEELCGRA 234 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~---~l~nLA~~L~~~-----------------~gd~ekAee~~erA 234 (331)
...++|.+|...+++++|+.+|+++++.+|+++. +++.+|.++... .+++++|+..|+++
T Consensus 43 a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 122 (225)
T 2yhc_A 43 VQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKL 122 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHH
Confidence 3567889999999999999999999999999865 677777775531 46899999999999
Q ss_pred HHhCCCCHHHH-----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCch
Q 020094 235 ILANPSDGNIL-----------------SLYADLIWQAHKDASRAESYFDQAVKSAPDDC---YVLASYAKFLWDAGDDE 294 (331)
Q Consensus 235 LeldP~d~~al-----------------~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~---~vl~~LA~~L~~lG~~e 294 (331)
++.+|+++.++ ..++.+++. .|++++|+..|+++++..|++. .+++.++.++.++|+.+
T Consensus 123 l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 123 VRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp HTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 99999987665 356667777 9999999999999999999876 67999999999999999
Q ss_pred HHHHhhh
Q 020094 295 EEEQDNE 301 (331)
Q Consensus 295 Ea~~~~~ 301 (331)
+|.+.++
T Consensus 202 ~A~~~~~ 208 (225)
T 2yhc_A 202 QAEKVAK 208 (225)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988776
No 92
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.45 E-value=1e-12 Score=109.49 Aligned_cols=97 Identities=16% Similarity=0.108 Sum_probs=90.7
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 020094 203 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLAS 282 (331)
Q Consensus 203 nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~ 282 (331)
++.++..+..+|.+++. .+++++|+++|+++++++|+++.+|.+++.+++. .|++++|+.+|+++++++|++..+|++
T Consensus 7 ~~~~a~~~~~~g~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMA-RKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 45567888999988776 9999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHcCCchHHHHhhh
Q 020094 283 YAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 283 LA~~L~~lG~~eEa~~~~~ 301 (331)
+|.+|..+|++++|...++
T Consensus 85 lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHH
Confidence 9999999999999987666
No 93
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.45 E-value=2.3e-12 Score=121.37 Aligned_cols=127 Identities=13% Similarity=0.072 Sum_probs=101.2
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHH------------HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNY------------ARFLKEVRGDFAKAEELCGRAILANPS 240 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nL------------A~~L~~~~gd~ekAee~~erALeldP~ 240 (331)
.....+++.+|...+++++|+.+|++++..+|++..++..+ |.++.. .|++++|+.+|+++++++|+
T Consensus 211 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~A~~~~~~~l~~~p~ 289 (450)
T 2y4t_A 211 TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR-DGRYTDATSKYESVMKTEPS 289 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCc
Confidence 34466778888888888888888888888888888777666 666554 78888888888888888888
Q ss_pred CHH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 241 DGN----ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 241 d~~----al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
++. ++..++.++.. .|++++|+.+|+++++++|++..+|..++.++...|++++|...++
T Consensus 290 ~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 353 (450)
T 2y4t_A 290 IAEYTVRSKERICHCFSK-DEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYE 353 (450)
T ss_dssp SHHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 754 56667777777 8888888888888888888888888888888888888888887776
No 94
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.45 E-value=6.5e-13 Score=121.87 Aligned_cols=125 Identities=15% Similarity=0.033 Sum_probs=110.9
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVR-GDFAKAEELCGRAILANPSD------ 241 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n------~~~l~nLA~~L~~~~-gd~ekAee~~erALeldP~d------ 241 (331)
...|++.+|...|++++|+.+|++++.+.|.. ..++.++|.++.. . |++++|+++|++|+++.|.+
T Consensus 79 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-~lg~~~~A~~~~~~Al~~~~~~~~~~~~ 157 (292)
T 1qqe_A 79 TYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN-DLHDYAKAIDCYELAGEWYAQDQSVALS 157 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHhCCChHHH
Confidence 46789999999999999999999999998754 4578899988655 6 99999999999999998865
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHcCCchHHHHhhh
Q 020094 242 GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCY-------VLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 242 ~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~-------vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
..++.+++.++.. +|++++|+.+|++++++.|++.. ++.+++.++...|+.++|...++
T Consensus 158 ~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 223 (292)
T 1qqe_A 158 NKCFIKCADLKAL-DGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQ 223 (292)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5678889999988 99999999999999999996643 67899999999999999999887
No 95
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.45 E-value=1.8e-12 Score=126.87 Aligned_cols=129 Identities=12% Similarity=0.011 Sum_probs=113.9
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
.....+++..|...|++++|+.+|+++++.+|++..++..++.++.. .|++++|+++|+++++.+|++..++..++.++
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAI-EGEHDQAISAYTTAARLFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 33456788899999999999999999999999999999999988766 89999999999999999999999998888888
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 253 WQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 253 ~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.. .|++++|+.+|+++++++|.+..+|..++.+|.+.|++++|.+.+++.
T Consensus 452 ~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 501 (597)
T 2xpi_A 452 MQ-LGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNA 501 (597)
T ss_dssp HH-HTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HH-cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 87 999999999999999999999999999999999999999998877743
No 96
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.44 E-value=2.1e-12 Score=121.59 Aligned_cols=129 Identities=12% Similarity=0.040 Sum_probs=117.7
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.-....+|..|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|+++++++|+++.++..++.+
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 103 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLA-MGKSKAALPDLTKVIQLKMDFTAARLQRGHL 103 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 334467789999999999999999999999999999999999999766 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHH------------HHHHHHcCCchHHHHhhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDC---YVLASY------------AKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~---~vl~~L------------A~~L~~lG~~eEa~~~~~~ 302 (331)
+.. .|++++|+.+|+++++++|++. .++..+ |.++...|++++|...++.
T Consensus 104 ~~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 168 (450)
T 2y4t_A 104 LLK-QGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDK 168 (450)
T ss_dssp HHH-TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 998 9999999999999999999988 776655 6669999999999988873
No 97
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.44 E-value=3.9e-13 Score=116.90 Aligned_cols=129 Identities=20% Similarity=0.253 Sum_probs=115.8
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------N 238 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~--------nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel--------d 238 (331)
...++|.+|...+++++|+.+|++++.. +|....++.++|.++.. .|++++|+++|++++.+ +
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 123 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKFH 123 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4678999999999999999999999988 46667789999998765 99999999999999998 5
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCchHHHHhhhhhhc
Q 020094 239 PSDGNILSLYADLIWQAHKDASRAESYFDQAVKS--------APDDCYVLASYAKFLWDAGDDEEEEQDNEESQH 305 (331)
Q Consensus 239 P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l--------dP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~~ 305 (331)
|....++.+++.+++. .|++++|+.+|++++++ .|....++..+|.++...|++++|...+++...
T Consensus 124 ~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 197 (283)
T 3edt_B 124 PDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 197 (283)
T ss_dssp HHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 7788899999999998 99999999999999999 777889999999999999999999987775443
No 98
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.44 E-value=2.2e-12 Score=126.30 Aligned_cols=124 Identities=12% Similarity=-0.017 Sum_probs=70.2
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCC-HHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSD-GNILSLY 248 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel------dP~d-~~al~~y 248 (331)
..+++..|...|++++|+.+|+++++.+|.++.++..++.++.. .|++++|+++|++++++ +|++ ..+|..+
T Consensus 444 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l 522 (597)
T 2xpi_A 444 YLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFN-KSDMQTAINHFQNALLLVKKTQSNEKPWAATWANL 522 (597)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHH
Confidence 44455555555555555555555555555555555555555443 55555555555555555 4433 4555555
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 249 ADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 249 A~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.+++. .|++++|+.+|+++++++|++..++..++.+|...|++++|...++
T Consensus 523 ~~~~~~-~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 574 (597)
T 2xpi_A 523 GHAYRK-LKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLH 574 (597)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHH-hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 555555 5566666666666666556555566666666666666655555554
No 99
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.44 E-value=1e-12 Score=103.25 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020094 190 SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQA 269 (331)
Q Consensus 190 ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekA 269 (331)
++|+.+|+++++.+|+++.+++++|.++.. .|++++|+.+|+++++++|+++.+|..++.++.. .|++++|+.+|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAE-HEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 578999999999999999999999999766 9999999999999999999999999999999998 99999999999999
Q ss_pred HHhCC--CCHHHHHHHHHHHHHcCCch
Q 020094 270 VKSAP--DDCYVLASYAKFLWDAGDDE 294 (331)
Q Consensus 270 L~ldP--~d~~vl~~LA~~L~~lG~~e 294 (331)
++++| .+...+..+..++..+++..
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~l~~~~ 106 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRRLARED 106 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHHhcccc
Confidence 99998 56677777777777665543
No 100
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.43 E-value=8.5e-13 Score=117.46 Aligned_cols=125 Identities=14% Similarity=-0.046 Sum_probs=111.3
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN---ALLLGNYARFLKEV--------RGDFAKAEELCGRAILANPSDGN 243 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n---~~~l~nLA~~L~~~--------~gd~ekAee~~erALeldP~d~~ 243 (331)
...++|.+|...+++++|+.+|++++..+|++ +.+++.+|.++. . .+++++|+.+|+++++.+|+++.
T Consensus 54 a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 132 (261)
T 3qky_A 54 AQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchh
Confidence 46789999999999999999999999998865 667888898854 4 78999999999999999999877
Q ss_pred HH-----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHc----------CCc
Q 020094 244 IL-----------------SLYADLIWQAHKDASRAESYFDQAVKSAPD---DCYVLASYAKFLWDA----------GDD 293 (331)
Q Consensus 244 al-----------------~~yA~ll~~~~Gd~deA~~yfekAL~ldP~---d~~vl~~LA~~L~~l----------G~~ 293 (331)
+. +.+|.+++. .|++++|+.+|+++++..|+ ...+++.++.+|..+ |++
T Consensus 133 ~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~ 211 (261)
T 3qky_A 133 VDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERY 211 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchH
Confidence 76 677888888 99999999999999999997 567999999999987 788
Q ss_pred hHHHHhhh
Q 020094 294 EEEEQDNE 301 (331)
Q Consensus 294 eEa~~~~~ 301 (331)
++|...++
T Consensus 212 ~~A~~~~~ 219 (261)
T 3qky_A 212 RRAVELYE 219 (261)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88988777
No 101
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.43 E-value=1.7e-13 Score=129.71 Aligned_cols=124 Identities=15% Similarity=0.052 Sum_probs=87.9
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA-----------------LLLGNYARFLKEVRGDFAKAEELCGRAILAN 238 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~-----------------~~l~nLA~~L~~~~gd~ekAee~~erALeld 238 (331)
..+.|..|+..+++++|+.+|++++..+|++. .+++++|.++.. .+++++|+.+|++|++++
T Consensus 182 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 182 RKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 45678889999999999999999999999987 388999998765 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCchHHHHhhh
Q 020094 239 PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA-GDDEEEEQDNE 301 (331)
Q Consensus 239 P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l-G~~eEa~~~~~ 301 (331)
|+++.+|+++|.+++. +|++++|+.+|+++++++|++..++..++.+.... +..+++.+.++
T Consensus 261 p~~~~a~~~lg~a~~~-~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~ 323 (338)
T 2if4_A 261 EKNPKALFRRGKAKAE-LGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYK 323 (338)
T ss_dssp TTCHHHHHHHHHHHHT-TTCHHHHHHHHHHTTC-------------------------------
T ss_pred CCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 99999999999999999999999999999885544 44444454554
No 102
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=3.5e-12 Score=108.79 Aligned_cols=103 Identities=9% Similarity=0.005 Sum_probs=96.1
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG----------- 242 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~----------- 242 (331)
....|+|.+|...+++++|+.+|++++..+|+++.++.++|.++.. .|++++|+++|++++++.|.+.
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 116 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 116 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence 4567899999999999999999999999999999999999999776 9999999999999999998877
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 243 -----NILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCY 278 (331)
Q Consensus 243 -----~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~ 278 (331)
.++.+++.+++. .|++++|+.+|+++++++|++..
T Consensus 117 ~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 117 KLFACEVLYNIAFMYAK-KEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp EEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCSGGG
T ss_pred CccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHHcCccccc
Confidence 999999999998 99999999999999999997643
No 103
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.40 E-value=1.2e-12 Score=113.83 Aligned_cols=125 Identities=15% Similarity=0.170 Sum_probs=113.5
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------N 238 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~--------nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel--------d 238 (331)
...++|.+|...+++++|+.+|++++.+ +|....++.++|.++.. .|++++|+++|++++++ +
T Consensus 87 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 165 (283)
T 3edt_B 87 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYATRLGPDD 165 (283)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4678999999999999999999999998 57778889999999766 99999999999999999 7
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------------------------------------
Q 020094 239 PSDGNILSLYADLIWQAHKDASRAESYFDQAVKS---------------------------------------------- 272 (331)
Q Consensus 239 P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l---------------------------------------------- 272 (331)
|....++..++.+++. .|++++|+.+|++++++
T Consensus 166 ~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T 3edt_B 166 PNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKAC 244 (283)
T ss_dssp HHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CC
T ss_pred HHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhc
Confidence 8888899999999998 99999999999999987
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 273 ---APDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 273 ---dP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.|....++..+|.+|...|++++|...++
T Consensus 245 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 276 (283)
T 3edt_B 245 KVDSPTVNTTLRSLGALYRRQGKLEAAHTLED 276 (283)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 24556789999999999999999998887
No 104
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.40 E-value=2.3e-12 Score=113.35 Aligned_cols=126 Identities=16% Similarity=0.086 Sum_probs=110.6
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN---ILSLYA 249 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~---~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~---al~~yA 249 (331)
..+.|..+...|++++|+.+|++++..+|+++ .+++.+|.+++. .|++++|+..|+++++++|+++. +++.++
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g 85 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 85 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHH
Confidence 56788999999999999999999999999874 789999999776 99999999999999999999875 677777
Q ss_pred HHHHHH-----------------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCchH
Q 020094 250 DLIWQA-----------------HKDASRAESYFDQAVKSAPDDCYVL-----------------ASYAKFLWDAGDDEE 295 (331)
Q Consensus 250 ~ll~~~-----------------~Gd~deA~~yfekAL~ldP~d~~vl-----------------~~LA~~L~~lG~~eE 295 (331)
.+++.. .|++++|+.+|+++++..|++..++ ..+|.+|.+.|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~ 165 (225)
T 2yhc_A 86 LTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVA 165 (225)
T ss_dssp HHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 777641 4789999999999999999887655 578899999999999
Q ss_pred HHHhhhh
Q 020094 296 EEQDNEE 302 (331)
Q Consensus 296 a~~~~~~ 302 (331)
|...++.
T Consensus 166 A~~~~~~ 172 (225)
T 2yhc_A 166 VVNRVEG 172 (225)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988873
No 105
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.39 E-value=3e-12 Score=104.10 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HH
Q 020094 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD-------CY 278 (331)
Q Consensus 206 n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d-------~~ 278 (331)
.+.++.++|..++. .|+|++|+++|.+||+++|+++.+|.++|.+++. +|++++|+.+|+++++++|++ +.
T Consensus 7 ~A~a~~~lG~~~~~-~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 7 AAIAEKDLGNAAYK-QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 45567789999776 9999999999999999999999999999999998 999999999999999999855 35
Q ss_pred HHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 279 VLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 279 vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
++.++|.++...+++++|.+.++..
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~ka 109 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRS 109 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 8899999999999999999888733
No 106
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.39 E-value=3.7e-12 Score=122.38 Aligned_cols=125 Identities=15% Similarity=0.134 Sum_probs=117.6
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
..+++.++...+++++|+.+|++++..+|+ +.++..+|.++.. .+++++|+++|+++++.+|+++.++..++.+++.
T Consensus 246 ~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~- 322 (537)
T 3fp2_A 246 LCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLAD-KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFI- 322 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCC-SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHH-hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-
Confidence 556778999999999999999999999999 9999999998665 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.|++++|+.+|+++++++|++..++..++.++...|++++|...+++.
T Consensus 323 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 370 (537)
T 3fp2_A 323 LQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNET 370 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999888733
No 107
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.39 E-value=3.8e-13 Score=127.04 Aligned_cols=114 Identities=11% Similarity=-0.026 Sum_probs=108.7
Q ss_pred CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHH
Q 020094 186 NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---------------GNILSLYAD 250 (331)
Q Consensus 186 ~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d---------------~~al~~yA~ 250 (331)
..++++|+.+|++++..+|+++.++.++|.+++. .+++++|+.+|++|++++|++ ..++.+++.
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~-~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 204 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK-EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAM 204 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999776 999999999999999999999 699999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 251 LIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 251 ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++. +|++++|+.+|++|++++|++..+++++|.+|..+|++++|...++
T Consensus 205 ~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 254 (336)
T 1p5q_A 205 CHLK-LQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 254 (336)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 9998 9999999999999999999999999999999999999999998887
No 108
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.38 E-value=5e-12 Score=116.33 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=113.6
Q ss_pred CcccccchHHHHH-------hCCCc-------HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSN-------NNHGS-------SSTDAYYEKMIE-ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 172 ~~~~~~N~A~~y~-------s~gd~-------ekA~e~yerAL~-~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
+.....+++.++. ..|++ ++|+.+|+++++ ++|++..+|.+||.++.. .|++++|+++|++|++
T Consensus 49 ~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 127 (308)
T 2ond_A 49 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES-RMKYEKVHSIYNRLLA 127 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-cCCHHHHHHHHHHHHh
Confidence 3445677888876 35786 999999999999 799999999999999765 9999999999999999
Q ss_pred hCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCchHHHHhhhh
Q 020094 237 ANPSDGN-ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD-AGDDEEEEQDNEE 302 (331)
Q Consensus 237 ldP~d~~-al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~-lG~~eEa~~~~~~ 302 (331)
++|+++. +|..++.++.. .|++++|+.+|++|++.+|.+..++...+.+... .|+.++|.+.++.
T Consensus 128 ~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~ 194 (308)
T 2ond_A 128 IEDIDPTLVYIQYMKFARR-AEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFEL 194 (308)
T ss_dssp SSSSCTHHHHHHHHHHHHH-HHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999987 99999999888 9999999999999999999988888877777554 6999999988873
No 109
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.38 E-value=7.2e-13 Score=121.74 Aligned_cols=100 Identities=16% Similarity=0.069 Sum_probs=94.4
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|..|...+++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+.+|++|++++|++..+++.+|.++..
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 84 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999999766 9999999999999999999999999999999998
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC
Q 020094 255 AHKDASRAESYFDQAVKSAPDD 276 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d 276 (331)
.|++++|+.+|+++++++|++
T Consensus 85 -~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 85 -MESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHT
T ss_pred -cCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999865
No 110
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.38 E-value=3.8e-12 Score=102.88 Aligned_cols=90 Identities=11% Similarity=-0.037 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 210 LGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD 289 (331)
Q Consensus 210 l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~ 289 (331)
++.+|..+.. .|++++|+..|+++++++|+++.+|+.++.++.. .|++++|+.+|++|++++|++..++..+|.++..
T Consensus 20 ~~~~g~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 20 PMEEGLSMLK-LANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 5667777665 9999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred cCCchHHHHhhh
Q 020094 290 AGDDEEEEQDNE 301 (331)
Q Consensus 290 lG~~eEa~~~~~ 301 (331)
.|++++|...++
T Consensus 98 ~g~~~~A~~~~~ 109 (121)
T 1hxi_A 98 EHNANAALASLR 109 (121)
T ss_dssp HHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 999999998887
No 111
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.37 E-value=2.1e-12 Score=133.50 Aligned_cols=115 Identities=16% Similarity=-0.029 Sum_probs=108.8
Q ss_pred HhCCCcHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 184 NNNHGSSSTDAYYEKMI--------EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 184 ~s~gd~ekA~e~yerAL--------~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
...+++++|+++|++++ +.+|+++.++..+|.++.. .|++++|+++|++|++++|+++.+|+++|.+++.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~- 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLD-LGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL- 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHh-cCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-
Confidence 56689999999999999 9999999999999999776 9999999999999999999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 256 HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.|++++|+.+|++|++++|++..++.++|.++...|++++ ...++
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~ 524 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQ 524 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHH
Confidence 9999999999999999999999999999999999999999 87777
No 112
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.36 E-value=1e-11 Score=95.46 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=93.5
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...+++.++...+++++|+.+|++++..+|.++.++..+|.++.. .+++++|+++++++++.+|++..++..++.+++.
T Consensus 37 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 37 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999998765 9999999999999999999999999999999988
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC
Q 020094 255 AHKDASRAESYFDQAVKSAPDD 276 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d 276 (331)
.|++++|+.+|+++++.+|++
T Consensus 116 -~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 116 -QGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp -TTCHHHHHHHHHHHHHHSTTC
T ss_pred -HccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999863
No 113
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=2.4e-12 Score=122.44 Aligned_cols=127 Identities=14% Similarity=0.124 Sum_probs=111.6
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....+++.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|+++++++|+++.++..++.+++
T Consensus 271 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 349 (514)
T 2gw1_A 271 NSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFI-LQNYDQAGKDFDKAKELDPENIFPYIQLACLAY 349 (514)
T ss_dssp HHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHH-TTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHH
Confidence 3466788888888999999999999999999999998888888665 899999999999999999999999888888888
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
. .|++++|+.+|+++++.+|++..++..++.++...|++++|...++.
T Consensus 350 ~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 397 (514)
T 2gw1_A 350 R-ENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDL 397 (514)
T ss_dssp T-TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred H-cCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 7 89999999999999999999899999999999999999999877763
No 114
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.35 E-value=3.4e-12 Score=97.57 Aligned_cols=94 Identities=12% Similarity=-0.000 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHH
Q 020094 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYV 279 (331)
Q Consensus 206 n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~v 279 (331)
++..+.++|.++.. .|++++|+++|++|++++|+++.++.+++.+++. .|++++|+.+|+++++++|++ ..+
T Consensus 3 ~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK-QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence 45678889988765 9999999999999999999999999999999998 999999999999999999998 889
Q ss_pred HHHHHHHHHHcCCchHHHHhhh
Q 020094 280 LASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 280 l~~LA~~L~~lG~~eEa~~~~~ 301 (331)
++.++.++...|+.+++...++
T Consensus 81 ~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 81 QYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHHhHhhhHhHHH
Confidence 9999999999998877765554
No 115
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.34 E-value=9.3e-12 Score=97.07 Aligned_cols=99 Identities=20% Similarity=0.151 Sum_probs=91.9
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 020094 203 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLAS 282 (331)
Q Consensus 203 nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~ 282 (331)
.|.++..+..+|.++.. .+++++|+.+|+++++.+|++..++..++.+++. .+++++|+.+|+++++++|++..++..
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQ-KGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-LLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp SSCHHHHHHHHHHHHHH-TTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 46678888999988766 9999999999999999999999999999999888 999999999999999999999999999
Q ss_pred HHHHHHHcCCchHHHHhhhhh
Q 020094 283 YAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 283 LA~~L~~lG~~eEa~~~~~~~ 303 (331)
+|.++...|++++|...+++.
T Consensus 90 la~~~~~~~~~~~A~~~~~~~ 110 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKA 110 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHH
Confidence 999999999999999888733
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.34 E-value=1.5e-12 Score=111.67 Aligned_cols=115 Identities=13% Similarity=-0.025 Sum_probs=102.3
Q ss_pred hCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHH
Q 020094 185 NNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG----------------NILSLY 248 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~----------------~al~~y 248 (331)
..+.++++.+.|.......+..+..+..+|..++. .+++++|+++|++|+++.|+++ .++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFK-KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL 94 (198)
T ss_dssp ------CCCSGGGCCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Confidence 34788999999988888888888999999999776 9999999999999999999987 899899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 249 ADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 249 A~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.+++. .|++++|+.+|+++++++|++..+++.+|.++..+|++++|.+.++
T Consensus 95 a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 146 (198)
T 2fbn_A 95 ATCYNK-NKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLY 146 (198)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHH-hcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 999988 9999999999999999999999999999999999999999988776
No 117
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.33 E-value=3.9e-12 Score=120.96 Aligned_cols=129 Identities=16% Similarity=0.127 Sum_probs=120.1
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.....+++.+|...+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|+++++.+|+++.++..++.+
T Consensus 303 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 381 (514)
T 2gw1_A 303 NSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYR-ENKFDDCETLFSEAKRKFPEAPEVPNFFAEI 381 (514)
T ss_dssp CTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 344677899999999999999999999999999999999999999766 9999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHH---cCCchHHHHhhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSAPDDCY------VLASYAKFLWD---AGDDEEEEQDNEE 302 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ldP~d~~------vl~~LA~~L~~---lG~~eEa~~~~~~ 302 (331)
+.. .|++++|+.+|+++++.+|++.. ++..++.++.. .|++++|...++.
T Consensus 382 ~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~ 440 (514)
T 2gw1_A 382 LTD-KNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEK 440 (514)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHH
T ss_pred HHH-CCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Confidence 998 99999999999999999998754 99999999999 9999999988873
No 118
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.33 E-value=3.4e-11 Score=91.42 Aligned_cols=94 Identities=18% Similarity=0.018 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAK 285 (331)
Q Consensus 206 n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~ 285 (331)
.+..+..+|..+.. .+++++|+.+|++++..+|+++.++..++.+++. .|++++|+.+|+++++.+|++..++..++.
T Consensus 3 ~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 3 QVNELKEKGNKALS-VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45677888888665 9999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHcCCchHHHHhhh
Q 020094 286 FLWDAGDDEEEEQDNE 301 (331)
Q Consensus 286 ~L~~lG~~eEa~~~~~ 301 (331)
++...|++++|...++
T Consensus 81 ~~~~~~~~~~A~~~~~ 96 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYE 96 (118)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHH
Confidence 9999999999998887
No 119
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=9e-12 Score=118.58 Aligned_cols=141 Identities=15% Similarity=0.122 Sum_probs=95.2
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHH----------------------------------
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFL---------------------------------- 217 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L---------------------------------- 217 (331)
......|+|.+|...+++++|+.+|+++++.+|+++.++.++|.++
T Consensus 246 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 325 (472)
T 4g1t_A 246 VTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKK 325 (472)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4445678999999999999999999999999999998877766432
Q ss_pred ------------------HHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 020094 218 ------------------KEVRGDFAKAEELCGRAILANPSDGN---ILSLYADLIWQAHKDASRAESYFDQAVKS---- 272 (331)
Q Consensus 218 ------------------~~~~gd~ekAee~~erALeldP~d~~---al~~yA~ll~~~~Gd~deA~~yfekAL~l---- 272 (331)
+...+++++|+++|++|++++|++.. ++..++.++....|++++|+.+|++|+++
T Consensus 326 a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~ 405 (472)
T 4g1t_A 326 ADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKS 405 (472)
T ss_dssp HHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCC
T ss_pred HhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 12267888888888888888887654 34456655544478888888888888765
Q ss_pred --------------------CCCCHHHHHHHHHHHHHcCCchHHHHhhhhhhcccCCCCCCCC
Q 020094 273 --------------------APDDCYVLASYAKFLWDAGDDEEEEQDNEESQHQTDHSHTSPP 315 (331)
Q Consensus 273 --------------------dP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~~~~~~~~~~~~ 315 (331)
+|+++.++.++|.++...|+.++|.+.++ +.-+..+..|.
T Consensus 406 ~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~---kALe~~~~~p~ 465 (472)
T 4g1t_A 406 REKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSE---RGLESGSLIPS 465 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH---HHHhcCCCCCc
Confidence 45566788889999999999999988887 55565555555
No 120
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=4e-12 Score=112.64 Aligned_cols=126 Identities=16% Similarity=0.202 Sum_probs=113.2
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEAN--------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILA-------- 237 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~n--------P~n~~~l~nLA~~L~~~~gd~ekAee~~erALel-------- 237 (331)
....++|.+|...+++++|+.+|++++.+. |....++.++|.++.. .|++++|+++|++++++
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~ 190 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN-QGKYEEVEYYYQRALEIYQTKLGPD 190 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 346789999999999999999999999984 5667788899998765 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------------------------------
Q 020094 238 NPSDGNILSLYADLIWQAHKDASRAESYFDQAVKS--------------------------------------------- 272 (331)
Q Consensus 238 dP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l--------------------------------------------- 272 (331)
+|....++..++.+++. .|++++|+.+|++++++
T Consensus 191 ~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 269 (311)
T 3nf1_A 191 DPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKA 269 (311)
T ss_dssp CHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC-----
T ss_pred CHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhh
Confidence 78888899899999988 99999999999999985
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 273 ----APDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 273 ----dP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.|.+..++..+|.+|...|++++|.+.++
T Consensus 270 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 302 (311)
T 3nf1_A 270 CKVDSPTVTTTLKNLGALYRRQGKFEAAETLEE 302 (311)
T ss_dssp ----CHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 46677899999999999999999998887
No 121
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.32 E-value=1.6e-11 Score=94.70 Aligned_cols=100 Identities=16% Similarity=0.088 Sum_probs=92.0
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 201 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVL 280 (331)
Q Consensus 201 ~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl 280 (331)
..+|.++..+..+|.++.. .+++++|+.+|++++..+|+++.++..++.+++. .|++++|+.+|+++++.+|++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMK-VENFEAAVHFYGKAIELNPANAVYFCNRAAAYSK-LGNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcchhhhHHHHHHHHHHHH-ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hhchHHHHHHHHHHHhcCccCHHHH
Confidence 3456677888999988766 9999999999999999999999999999999988 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCchHHHHhhhh
Q 020094 281 ASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 281 ~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
..+|.++...+++++|...++.
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~ 105 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKK 105 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999988873
No 122
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.32 E-value=4.4e-12 Score=112.37 Aligned_cols=128 Identities=20% Similarity=0.238 Sum_probs=114.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN-------- 238 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~--------nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeld-------- 238 (331)
...++|.+|...+++++|+.+|++++.. +|....++.++|.++.. .|++++|+++|++++++.
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4678999999999999999999999998 46667888999998765 999999999999999984
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCchHHHHhhhhhh
Q 020094 239 PSDGNILSLYADLIWQAHKDASRAESYFDQAVKS--------APDDCYVLASYAKFLWDAGDDEEEEQDNEESQ 304 (331)
Q Consensus 239 P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l--------dP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~ 304 (331)
|....++..++.+++. .|++++|+.+|++++++ .|....++..++.++...|++++|...+++..
T Consensus 150 ~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQN-QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 6677888889998888 99999999999999999 77778899999999999999999998777444
No 123
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.32 E-value=8.9e-12 Score=115.36 Aligned_cols=126 Identities=10% Similarity=-0.032 Sum_probs=110.0
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+......+|..|...|++++|+.+|++ |+++.++..+|.++.. .|++++|+++|+++++.+|++..+....+++
T Consensus 100 ~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~ 173 (291)
T 3mkr_A 100 NTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLK-LDRLDLARKELKKMQDQDEDATLTQLATAWV 173 (291)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhhCcCcHHHHHHHHHH
Confidence 445678899999999999999999998 9999999999999766 9999999999999999999987655433433
Q ss_pred HHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 252 IWQ-AHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 252 l~~-~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.+. ..|++++|+.+|+++++.+|+++.++.++|.++...|++++|...+++.
T Consensus 174 ~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~a 226 (291)
T 3mkr_A 174 SLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEA 226 (291)
T ss_dssp HHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 322 1589999999999999999999999999999999999999999988843
No 124
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.32 E-value=5.5e-11 Score=90.86 Aligned_cols=99 Identities=19% Similarity=0.334 Sum_probs=89.1
Q ss_pred hCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 202 ANPGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVL 280 (331)
Q Consensus 202 ~nP~n-~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl 280 (331)
.+|.+ ..++..+|.++.. .+++++|+++|++++..+|++..++..++.+++. .|++++|+.+|+++++.+|.+..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp ----CHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCCccHHHH
Confidence 45665 7788899988666 9999999999999999999999999999999988 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCchHHHHhhhh
Q 020094 281 ASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 281 ~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
..++.++...+++++|...+++
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~ 102 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQK 102 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHH
Confidence 9999999999999999988873
No 125
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.32 E-value=8.3e-12 Score=99.07 Aligned_cols=126 Identities=13% Similarity=0.025 Sum_probs=107.3
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GN 243 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~------~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~~ 243 (331)
..++|.+|...+++++|+.+|++++...+... .++.++|.++.. .|++++|+++|++++++.+.. ..
T Consensus 12 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 90 (164)
T 3ro3_A 12 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF-LGEFETASEYYKKTLLLARQLKDRAVEAQ 90 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 56789999999999999999999999866432 477888988766 999999999999999987653 66
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 244 ILSLYADLIWQAHKDASRAESYFDQAVKSAP------DDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 244 al~~yA~ll~~~~Gd~deA~~yfekAL~ldP------~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
++..++.+++. .|++++|+.+|++++++.+ ....++..++.++...|+.++|...+++.
T Consensus 91 ~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 155 (164)
T 3ro3_A 91 SCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKH 155 (164)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 78888888888 9999999999999998844 22568899999999999999998877733
No 126
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.32 E-value=2.4e-11 Score=89.81 Aligned_cols=85 Identities=16% Similarity=0.262 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYA 284 (331)
Q Consensus 205 ~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA 284 (331)
.++.++..+|.++.. .+++++|+.+|+++++++|+++.++..++.+++. .|++++|+.+|+++++++|++..++.+++
T Consensus 7 ~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 7 NSAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 457788899988765 9999999999999999999999999999999988 99999999999999999999999999999
Q ss_pred HHHHHcC
Q 020094 285 KFLWDAG 291 (331)
Q Consensus 285 ~~L~~lG 291 (331)
.++...|
T Consensus 85 ~~~~~~g 91 (91)
T 1na3_A 85 NAKQKQG 91 (91)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987654
No 127
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.31 E-value=1e-11 Score=113.80 Aligned_cols=122 Identities=11% Similarity=0.021 Sum_probs=105.7
Q ss_pred hHHHHHhCCCcHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 020094 179 NNNYSNNNHGSSSTDAYYEKMIEANPG------NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILS 246 (331)
Q Consensus 179 ~A~~y~s~gd~ekA~e~yerAL~~nP~------n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~~al~ 246 (331)
.+.+|...+++++|+.+|++++.+.+. .+.++.++|.++.. .|++++|+.+|++|+++.|.. +.++.
T Consensus 43 a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~ 121 (292)
T 1qqe_A 43 AATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKS-GGNSVNAVDSLENAIQIFTHRGQFRRGANFKF 121 (292)
T ss_dssp HHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456888899999999999999998542 25688899999665 999999999999999998854 46788
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 247 LYADLIWQAH-KDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 247 ~yA~ll~~~~-Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+++.++.. . |++++|+.+|++|+++.|.+ ..++.++|.++..+|++++|...++.
T Consensus 122 ~lg~~~~~-~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 183 (292)
T 1qqe_A 122 ELGEILEN-DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSK 183 (292)
T ss_dssp HHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHH-hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 88888877 7 99999999999999998854 56789999999999999999988873
No 128
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=2.9e-11 Score=96.18 Aligned_cols=100 Identities=16% Similarity=0.100 Sum_probs=93.0
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 020094 201 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDC 277 (331)
Q Consensus 201 ~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d---~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~ 277 (331)
..+|.+...+..+|..+.. .+++++|+++|+++++++|++ ..++..++.+++. .+++++|+.+|+++++++|++.
T Consensus 22 ~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFK-CGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHT-TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCCH
T ss_pred ccchHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccCH
Confidence 3578899999999988765 999999999999999999998 8999999999888 9999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 278 YVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 278 ~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
.+++.++.++...+++++|...++.
T Consensus 100 ~~~~~~a~~~~~~~~~~~A~~~~~~ 124 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQAVLDLQR 124 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999988873
No 129
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.30 E-value=1.6e-12 Score=128.07 Aligned_cols=115 Identities=11% Similarity=0.019 Sum_probs=109.0
Q ss_pred hCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHH
Q 020094 185 NNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---------------GNILSLYA 249 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d---------------~~al~~yA 249 (331)
...++++|+.+|++++..+|+++..+.++|.+++. .++|++|+.+|++|++++|++ ..+|.+++
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~-~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla 324 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFK-GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLA 324 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHH
Confidence 44678899999999999999999999999999776 999999999999999999999 79999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.+++. ++++++|+.+|++|++++|++..+++++|.+|..++++++|...++
T Consensus 325 ~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~ 375 (457)
T 1kt0_A 325 MCYLK-LREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 375 (457)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHH-hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 99998 9999999999999999999999999999999999999999998887
No 130
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.29 E-value=1.9e-11 Score=116.35 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=101.4
Q ss_pred HhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCC
Q 020094 184 NNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKE--VRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ---AHKD 258 (331)
Q Consensus 184 ~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~--~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~---~~Gd 258 (331)
...++|++|+.+|+++++++|+++.++.+++.+++. ..+++++|++.|++|++++|+++.++..++..+.. ..++
T Consensus 149 ~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~ 228 (472)
T 4g1t_A 149 CGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEE 228 (472)
T ss_dssp HCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC-----
T ss_pred HccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhH
Confidence 345679999999999999999999999999977543 35788999999999999999999999888876544 2467
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 259 ASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 259 ~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++|+.+|++++.++|.+..++.++|.+|...|++++|...++
T Consensus 229 ~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 271 (472)
T 4g1t_A 229 EGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLK 271 (472)
T ss_dssp -CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 8899999999999999999999999999999999999998877
No 131
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.28 E-value=1.8e-11 Score=120.66 Aligned_cols=130 Identities=14% Similarity=0.157 Sum_probs=117.0
Q ss_pred CcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 172 GSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA-LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~-~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ 250 (331)
+.....+++.++...+++++|..+|+++++++|.++ .+|.+|+.++.. .|++++|.++|++|++..|.+..++...+.
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~ 398 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFKKAREDARTRHHVYVTAAL 398 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTCTTCCTHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHH-hcCHHHHHHHHHHHHhccCCchHHHHHHHH
Confidence 345677899999999999999999999999999996 699999998665 899999999999999999988888766666
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 251 LIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 251 ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+.+...|++++|..+|+++++.+|+++.+|..++.++...|+.++|...++.
T Consensus 399 ~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~ 450 (530)
T 2ooe_A 399 MEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFER 450 (530)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHH
T ss_pred HHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHH
Confidence 6555589999999999999999999999999999999999999999988873
No 132
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.28 E-value=7.3e-11 Score=107.53 Aligned_cols=124 Identities=11% Similarity=0.040 Sum_probs=105.9
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAI---LANPSDG---- 242 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n------~~~l~nLA~~L~~~~gd~ekAee~~erAL---eldP~d~---- 242 (331)
..+++.+|...+++++|+.+|++++...+.. ..++.++|.++.. .|++++|+++|++|+ +..|++.
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~-~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 4567888899999999999999999876544 5688899999766 999999999999999 6677654
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCchHH-HHhhh
Q 020094 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPD------DCYVLASYAKFLWDAGDDEEE-EQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~------d~~vl~~LA~~L~~lG~~eEa-~~~~~ 301 (331)
.++.++|.+++. +|++++|+.+|++|+++.++ -..++.++|.++...|++++| ...++
T Consensus 197 ~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~ 261 (293)
T 2qfc_A 197 KVRYNHAKALYL-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYK 261 (293)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 688899999998 99999999999999998652 278899999999999999999 54344
No 133
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.27 E-value=3.1e-11 Score=93.33 Aligned_cols=97 Identities=12% Similarity=0.154 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------H
Q 020094 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD-------C 277 (331)
Q Consensus 205 ~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d-------~ 277 (331)
..+..+..+|.++.. .+++++|+.+|+++++.+|+++.++..++.+++. .|++++|+.+|+++++++|.+ .
T Consensus 2 ~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 79 (131)
T 1elr_A 2 KQALKEKELGNDAYK-KKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRENREDYRQIA 79 (131)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred hHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccccchhHHHHH
Confidence 346778889988766 9999999999999999999999999999999988 999999999999999999877 8
Q ss_pred HHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 278 YVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 278 ~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.+++.+|.++...|++++|...++..
T Consensus 80 ~~~~~la~~~~~~~~~~~A~~~~~~~ 105 (131)
T 1elr_A 80 KAYARIGNSYFKEEKYKDAIHFYNKS 105 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 99999999999999999999888733
No 134
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.26 E-value=2e-11 Score=114.57 Aligned_cols=128 Identities=10% Similarity=0.030 Sum_probs=111.9
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN-------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDG--- 242 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n-------~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~--- 242 (331)
.....++|.+|...+++++|+.+|++++.+.+.. ..++.++|.++.. .|++++|+++|++|+++.+...
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLD-LKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHcCChH
Confidence 3467899999999999999999999999985443 4578889988665 9999999999999999866433
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 243 ---NILSLYADLIWQAHKDASRAESYFDQAVK-----SA-PDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 243 ---~al~~yA~ll~~~~Gd~deA~~yfekAL~-----ld-P~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
.++.++|.++.. +|++++|+.+|++|++ .+ |....++.++|.++...|++++|...++.
T Consensus 222 ~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 289 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNS-QSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSK 289 (383)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 578889999998 9999999999999999 56 77889999999999999999999887763
No 135
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.25 E-value=6.8e-11 Score=92.88 Aligned_cols=92 Identities=18% Similarity=0.171 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHH
Q 020094 209 LLGNYARFLKEVRGDFAKAEELCGRAILANPSDG---NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD---CYVLAS 282 (331)
Q Consensus 209 ~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~---~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d---~~vl~~ 282 (331)
.++.+|..+.. .|++++|+.+|+++++.+|+++ .+++.++.+++. .|++++|+.+|+++++.+|++ ..+++.
T Consensus 4 ~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 4 TAYNVAFDALK-NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CHHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHH-hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 45677878666 9999999999999999999998 789899999998 999999999999999999999 899999
Q ss_pred HHHHHHHcCCchHHHHhhhh
Q 020094 283 YAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 283 LA~~L~~lG~~eEa~~~~~~ 302 (331)
+|.++...|++++|...++.
T Consensus 82 la~~~~~~g~~~~A~~~~~~ 101 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQ 101 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999988873
No 136
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.25 E-value=5.4e-11 Score=98.71 Aligned_cols=93 Identities=17% Similarity=0.073 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILA------------------NPSDGNILSLYADLIWQAHKDASRAESYFDQ 268 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALel------------------dP~d~~al~~yA~ll~~~~Gd~deA~~yfek 268 (331)
+..+...|..++. .|+|++|+.+|.+||.+ +|.+..++.+++.+++. .|++++|+.++++
T Consensus 11 a~~~~~~G~~~~~-~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 11 VEALRQKGNELFV-QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHH
Confidence 4556778888776 99999999999999999 78888999999999998 9999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 269 AVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 269 AL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++++|++..+++.+|.+|..+|++++|...++
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~ 121 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLK 121 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 999999999999999999999999999998877
No 137
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.24 E-value=6.4e-11 Score=103.46 Aligned_cols=94 Identities=20% Similarity=0.132 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-------DGN-----ILSLYADLIWQAHKDASRAESYFDQAVKS-- 272 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~-------d~~-----al~~yA~ll~~~~Gd~deA~~yfekAL~l-- 272 (331)
...+.+.|..++. .|+|++|+++|++||+++|+ +.. +|.+++.++.. .|++++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~-~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQLV-AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 4556788888776 99999999999999999999 544 99999999998 99999999999999999
Q ss_pred -----CCCCHHHH----HHHHHHHHHcCCchHHHHhhhh
Q 020094 273 -----APDDCYVL----ASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 273 -----dP~d~~vl----~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+|++..+| ++.|.+|..+|+++||...++.
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~k 127 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKK 127 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHH
Confidence 99999999 9999999999999999988873
No 138
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.24 E-value=2.6e-11 Score=110.56 Aligned_cols=123 Identities=11% Similarity=0.021 Sum_probs=103.1
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILA-------NPSDGN 243 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n------~~~l~nLA~~L~~~~gd~ekAee~~erALel-------dP~d~~ 243 (331)
.+++.+|...+++++|+.+|++++...+.. ..++.++|.++.. .|++++|+++|++|++. .+....
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 197 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 357888888889999999999999975443 3368899988766 99999999999999953 223456
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC-chHHHHhhh
Q 020094 244 ILSLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGD-DEEEEQDNE 301 (331)
Q Consensus 244 al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~-~eEa~~~~~ 301 (331)
++.+++.+++. +|++++|+.+|++|+++.+.. +.++.++|.++..+|+ +++|...++
T Consensus 198 ~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~ 261 (293)
T 3u3w_A 198 VRYNHAKALYL-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYK 261 (293)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHH
Confidence 78899999998 999999999999999997643 7899999999999996 488887665
No 139
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.24 E-value=2.4e-11 Score=113.21 Aligned_cols=124 Identities=9% Similarity=0.052 Sum_probs=112.2
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNIL 245 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~----~~l~nLA~~L~~~~gd~ekAee~~erALel------dP~d~~al 245 (331)
....|..+...+++++|+.+|+++++.+|+++ .++..+|.++.. .|++++|+++|++++++ +|....++
T Consensus 51 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 129 (411)
T 4a1s_A 51 LALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRLGEAKSS 129 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCchHHHHHH
Confidence 45788999999999999999999999999997 578889988766 99999999999999998 68888999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCC-----------------chHHHHhhh
Q 020094 246 SLYADLIWQAHKDASRAESYFDQAVKS------APDDCYVLASYAKFLWDAGD-----------------DEEEEQDNE 301 (331)
Q Consensus 246 ~~yA~ll~~~~Gd~deA~~yfekAL~l------dP~d~~vl~~LA~~L~~lG~-----------------~eEa~~~~~ 301 (331)
..++.+++. .|++++|+.+|++++++ .|....++.+++.++...|+ +++|...++
T Consensus 130 ~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~ 207 (411)
T 4a1s_A 130 GNLGNTLKV-MGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQ 207 (411)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 999999988 99999999999999999 56677899999999999999 888877665
No 140
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.24 E-value=1.7e-10 Score=93.41 Aligned_cols=94 Identities=17% Similarity=-0.005 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKF 286 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~ 286 (331)
+..+..+|..+.. .+++++|+.+|+++++++|+++.++..++.++.. .|++++|+.+|+++++++|.+..++..+|.+
T Consensus 13 ~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~ 90 (166)
T 1a17_A 13 AEELKTQANDYFK-AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567888888666 9999999999999999999999999999999988 9999999999999999999999999999999
Q ss_pred HHHcCCchHHHHhhhh
Q 020094 287 LWDAGDDEEEEQDNEE 302 (331)
Q Consensus 287 L~~lG~~eEa~~~~~~ 302 (331)
+...|++++|...++.
T Consensus 91 ~~~~~~~~~A~~~~~~ 106 (166)
T 1a17_A 91 NMALGKFRAALRDYET 106 (166)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHH
Confidence 9999999999988873
No 141
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.24 E-value=2.7e-10 Score=101.40 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=81.9
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDGNILSLY 248 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~----~gd~ekAee~~erALeldP~d~~al~~y 248 (331)
+....++|.+|...+++++|+.+|+++++ |+++.+++++|.++ .. .+++++|+++|++|++++ ++.++..+
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~-~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~l 80 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLY-YQGQGVEKNLKKAASFYAKACDLN--YSNGCHLL 80 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHH-HHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHH-HcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 33445667777777777777777777776 66677777777663 34 667777777777777764 66666666
Q ss_pred HHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 249 ADLIWQA---HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 249 A~ll~~~---~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
+.++... .+++++|+.+|+++++.+ +..++.+++.+|.. .++.++|...++
T Consensus 81 g~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~ 138 (273)
T 1ouv_A 81 GNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFT 138 (273)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHH
T ss_pred HHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHH
Confidence 5554421 567777777777777663 66777777777777 777777766665
No 142
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.23 E-value=6e-11 Score=92.28 Aligned_cols=89 Identities=12% Similarity=0.065 Sum_probs=76.7
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHH
Q 020094 202 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAP--DDCYV 279 (331)
Q Consensus 202 ~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP--~d~~v 279 (331)
.+|+++.+++++|.++.. .|++++|+.+|+++++++|+++.+|..++.++.. .|++++|+.+|+++++++| .+...
T Consensus 2 ~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK-HDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp ---CCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CCccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 489999999999999776 9999999999999999999999999999999988 9999999999999999987 56666
Q ss_pred HHHHHHHHHHcCC
Q 020094 280 LASYAKFLWDAGD 292 (331)
Q Consensus 280 l~~LA~~L~~lG~ 292 (331)
...+..++...+.
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 6777776665444
No 143
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.23 E-value=3e-11 Score=101.40 Aligned_cols=127 Identities=11% Similarity=0.031 Sum_probs=106.9
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC----
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIE------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA---NPS---- 240 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~------~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel---dP~---- 240 (331)
....++|.+|...+++++|+.+|++++. ..+....++.++|.++.. .|++++|+++|++++++ .++
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM-AGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 3467889999999999999999999999 455567788999988766 99999999999999998 443
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 241 DGNILSLYADLIWQAHKDASRAESYFDQAVKSAP--DD----CYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 241 d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP--~d----~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
...++.+++.+++. .|++++|+.+|++++++.+ .+ ..++.+++.++...|++++|...+++
T Consensus 106 ~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 172 (203)
T 3gw4_A 106 ASANAYEVATVALH-FGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLR 172 (203)
T ss_dssp HHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 35667788888888 9999999999999998743 23 23568999999999999999877663
No 144
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.22 E-value=1.1e-10 Score=107.22 Aligned_cols=97 Identities=14% Similarity=0.047 Sum_probs=92.0
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 020094 204 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASY 283 (331)
Q Consensus 204 P~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~L 283 (331)
|.++..+..+|..++. .|++++|+.+|++|++++|+++.++.++|.+++. .|++++|+.+|++|++++|++..+++++
T Consensus 1 p~~a~~~~~~g~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFV-GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHFFL 78 (281)
T ss_dssp CCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred ChhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 6788899999999776 9999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHcCCchHHHHhhhh
Q 020094 284 AKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 284 A~~L~~lG~~eEa~~~~~~ 302 (331)
|.+|...|++++|...++.
T Consensus 79 g~~~~~~g~~~~A~~~~~~ 97 (281)
T 2c2l_A 79 GQCQLEMESYDEAIANLQR 97 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 9999999999999988773
No 145
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.22 E-value=4.5e-11 Score=110.30 Aligned_cols=124 Identities=11% Similarity=0.052 Sum_probs=106.7
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------H
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPG--N----ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------G 242 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~--n----~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~ 242 (331)
...|++.+|...+++++|+.+|++++.+.+. + ..++.++|.++ .. +++++|+++|++|+++.|.. .
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~-~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~ 155 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLM-EP-LDLSKAVHLYQQAAAVFENEERLRQAA 155 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH-TT-TCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-Hc-CCHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 4568899999999999999999999998543 2 45678888885 43 99999999999999998754 5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.++.+++.++.. +|++++|+.+|++++++.|.+ ..++..++.++...|++++|...++
T Consensus 156 ~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~ 219 (307)
T 2ifu_A 156 ELIGKASRLLVR-QQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVR 219 (307)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 788889999888 999999999999999997743 3578889999999999999999887
No 146
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.22 E-value=2.4e-11 Score=111.61 Aligned_cols=126 Identities=13% Similarity=-0.010 Sum_probs=111.4
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------H
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL------LLGNYARFLKEVRGDFAKAEELCGRAILANPSD------G 242 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~------~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~ 242 (331)
...++|.+|...+++++|+.+|++++.+.+.... ++.++|.++.. .|++++|+.+|++++++.|.. .
T Consensus 189 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~ 267 (406)
T 3sf4_A 189 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF-LGEFETASEYYKKTLLLARQLKDRAVEA 267 (406)
T ss_dssp HHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHhCcCchHHH
Confidence 4678999999999999999999999998766544 78899988766 999999999999999998876 7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 243 ~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
.++..++.++.. .|++++|+.+|++++++.+.. ..++..++.++...|++++|...+++
T Consensus 268 ~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 332 (406)
T 3sf4_A 268 QSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 332 (406)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 788889998888 999999999999999996643 67899999999999999999877663
No 147
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.19 E-value=1.2e-11 Score=94.47 Aligned_cols=91 Identities=14% Similarity=0.133 Sum_probs=81.3
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNILSLYA 249 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~~al~~yA 249 (331)
..++|.++...+++++|+.+|+++++++|+++.++.++|.++.. .|++++|+++|+++++++|++ ..++..++
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 85 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLE 85 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999776 999999999999999999999 88888888
Q ss_pred HHHHHHcCCHHHHHHHHHH
Q 020094 250 DLIWQAHKDASRAESYFDQ 268 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfek 268 (331)
.++.. .|++++|+..|++
T Consensus 86 ~~~~~-~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 86 LAQGA-VGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHH-HHCCCCCSSSSSS
T ss_pred HHHHH-HHhHhhhHhHHHH
Confidence 87777 7887777766554
No 148
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.19 E-value=2.9e-11 Score=91.91 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=70.5
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL-LLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~-~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
.+.|..+...+++++|+.+|+++++.+|+++. ++.++|.++.. .|++++|+++|+++++++|+++.++..
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 35677788888888888888888888888888 88888887655 888888888888888888888877632
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 020094 256 HKDASRAESYFDQAVKSAPDD 276 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~d 276 (331)
+.+.+|+.+|++++..+|++
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCC
T ss_pred -HHHHHHHHHHHHHhccCccc
Confidence 34577888888888777754
No 149
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.18 E-value=8.2e-11 Score=103.92 Aligned_cols=113 Identities=8% Similarity=0.063 Sum_probs=100.2
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNILSL 247 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n~----~~l~nLA~~L~~~~gd~ekAee~~erALel------dP~d~~al~~ 247 (331)
-.|..+...+++++|+.+|++++..+|+++ .++..+|.++.. .|++++|++++++++++ .|..+.++..
T Consensus 10 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 88 (338)
T 3ro2_A 10 LEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKASGN 88 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 457889999999999999999999999995 677788988765 99999999999999988 5566788888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q 020094 248 YADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGD 292 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~ 292 (331)
++.+++. .|++++|+.+|++++++.+.. ..++..++.++...|+
T Consensus 89 l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 89 LGNTLKV-LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-ccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 9998888 999999999999999997633 4489999999999999
No 150
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.17 E-value=3e-11 Score=112.57 Aligned_cols=125 Identities=12% Similarity=-0.039 Sum_probs=109.4
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------H
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL------LLGNYARFLKEVRGDFAKAEELCGRAILANPSD------G 242 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~------~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~ 242 (331)
...++|.+|...+++++|+.+|++++++.+.... ++.++|.++.. .|++++|+++|++++.+.+.. .
T Consensus 225 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~ 303 (411)
T 4a1s_A 225 ACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIF-LGQFEDAAEHYKRTLALAVELGEREVEA 303 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-CcCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 5678999999999999999999999999875443 78889988665 999999999999999998854 7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.++..++.+++. .|++++|+.+|++++++.+.. ..++..++.++...|++++|...++
T Consensus 304 ~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 367 (411)
T 4a1s_A 304 QSCYSLGNTYTL-LHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAE 367 (411)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 788889998888 999999999999999996522 5689999999999999999986555
No 151
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.17 E-value=4.3e-11 Score=105.70 Aligned_cols=125 Identities=13% Similarity=-0.008 Sum_probs=109.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------H
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILANPSD------G 242 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~------~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~ 242 (331)
...+++.+|...+++++|+.+|++++...+... .++.++|.++.. .|++++|+.+|++++.+.+.. .
T Consensus 185 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 185 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF-LGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 467889999999999999999999998865432 378888988765 999999999999999988765 7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.++..++.+++. .|++++|+.+|++++++.+.. ..++..++.++...|++++|...++
T Consensus 264 ~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 327 (338)
T 3ro2_A 264 QSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAE 327 (338)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 788888888888 999999999999999986632 5688999999999999999998877
No 152
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.16 E-value=1e-09 Score=97.62 Aligned_cols=124 Identities=19% Similarity=0.121 Sum_probs=81.1
Q ss_pred CCcccccchHHHHHh----CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCH
Q 020094 171 GGSGFSGSNNNYSNN----NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSDG 242 (331)
Q Consensus 171 g~~~~~~N~A~~y~s----~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~----~gd~ekAee~~erALeldP~d~ 242 (331)
++.....+++.+|.. .+++++|+.+|++++..+ ++.++.++|.++. . .+++++|+++|++|++.+ ++
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~~~~~~~~~~~A~~~~~~a~~~~--~~ 146 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYH-DGKVVTRDFKKAVEYFTKACDLN--DG 146 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH-cCCCcccCHHHHHHHHHHHHhcC--cH
Confidence 344445666777777 777777777777776653 6677777776643 3 567777777777777765 45
Q ss_pred HHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 243 NILSLYADLIWQA---HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~---~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
.++..++.++... .+++++|+.+|+++++. .+..++.+++.+|.. .++.++|...++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~ 210 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALARYS 210 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHH
Confidence 6665665555431 56777777777777765 346667777777777 777777776665
No 153
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.16 E-value=1.2e-10 Score=107.09 Aligned_cols=124 Identities=8% Similarity=0.038 Sum_probs=109.4
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDGNIL 245 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~----~~l~nLA~~L~~~~gd~ekAee~~erALel------dP~d~~al 245 (331)
..+.|.++...+++++|+.+|++++..+|+++ .++..+|.++.. .|++++|+.+|++|+.+ .|..+.++
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 90 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKAS 90 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 45789999999999999999999999999995 577889988766 99999999999999988 45567888
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC--------------------chHHHHh
Q 020094 246 SLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGD--------------------DEEEEQD 299 (331)
Q Consensus 246 ~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~--------------------~eEa~~~ 299 (331)
..++.+++. .|++++|+.+|++++++.|.. ..++..++.++...|+ +++|...
T Consensus 91 ~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 169 (406)
T 3sf4_A 91 GNLGNTLKV-LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDF 169 (406)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 889998888 999999999999999997733 5589999999999999 8888776
Q ss_pred hh
Q 020094 300 NE 301 (331)
Q Consensus 300 ~~ 301 (331)
++
T Consensus 170 ~~ 171 (406)
T 3sf4_A 170 YE 171 (406)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.16 E-value=7.2e-11 Score=110.71 Aligned_cols=125 Identities=13% Similarity=-0.023 Sum_probs=106.9
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHh---CCC---CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEA---NPG---NALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-------DGNI 244 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~---nP~---n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~-------d~~a 244 (331)
..|.++...+++++|+.+|++++.+ .++ .+.++.++|.++.. .|++++|+.++++|+++.+. .+.+
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3678899999999999999999997 333 56789999999776 99999999999999998554 3468
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCchHHHHhhhhhh
Q 020094 245 LSLYADLIWQAHKDASRAESYFDQAVKSAPDDC------YVLASYAKFLWDAGDDEEEEQDNEESQ 304 (331)
Q Consensus 245 l~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~------~vl~~LA~~L~~lG~~eEa~~~~~~~~ 304 (331)
+.++|.++.. .|++++|+.+|++|+++.+... .++.++|.++...|++++|...+++..
T Consensus 187 ~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 187 HSLFATNFLD-LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 8888888888 9999999999999999966332 589999999999999999998777443
No 155
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.15 E-value=1.2e-09 Score=99.40 Aligned_cols=125 Identities=10% Similarity=-0.019 Sum_probs=103.9
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALL------LGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNI 244 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~------l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~~a 244 (331)
.+.+..+...+++++|+++|++++...+..... +..+|.++. ..+++++|+++|++|+++.+.. ..+
T Consensus 79 ~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 157 (293)
T 2qfc_A 79 KDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYI 157 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 356778899999999999999999998876543 445565544 3789999999999999876654 668
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 245 LSLYADLIWQAHKDASRAESYFDQAV---KSAPDDC----YVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 245 l~~yA~ll~~~~Gd~deA~~yfekAL---~ldP~d~----~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
+..+|.+++. .|++++|+.+|++|+ +..|++. .++.++|.+|...|++++|...++..
T Consensus 158 ~~~lg~~y~~-~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~ka 222 (293)
T 2qfc_A 158 ENAIANIYAE-NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 8889998888 999999999999999 5566543 68999999999999999999877643
No 156
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.13 E-value=6e-10 Score=82.17 Aligned_cols=79 Identities=19% Similarity=0.205 Sum_probs=73.6
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...++|.+|...+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+++|+++++++|+++.++..++.++..
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999999999999766 9999999999999999999999999988887765
No 157
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.13 E-value=3.9e-11 Score=94.96 Aligned_cols=81 Identities=19% Similarity=0.127 Sum_probs=73.8
Q ss_pred cCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHH
Q 020094 221 RGDFAKAEELCGRAILA---NPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEE 297 (331)
Q Consensus 221 ~gd~ekAee~~erALel---dP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~ 297 (331)
.|++++|+.+|++|+++ +|+++.++..++.+++. .|++++|+.+|+++++++|++..+++++|.++...|++++|.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 68899999999999999 69999999999999998 999999999999999999999999999999999999999999
Q ss_pred Hhhhh
Q 020094 298 QDNEE 302 (331)
Q Consensus 298 ~~~~~ 302 (331)
..++.
T Consensus 82 ~~~~~ 86 (117)
T 3k9i_A 82 ELLLK 86 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87773
No 158
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.13 E-value=1.6e-10 Score=108.58 Aligned_cols=130 Identities=16% Similarity=-0.049 Sum_probs=111.8
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPG-------NALLLGNYARFLKEVRGDFAKAEELCGRAILANP------ 239 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~-------n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP------ 239 (331)
.....++|.+|...+++++|+.+|++++.+.+. .+.++.++|.++.. .|++++|+++|++|+++.+
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~ 219 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDD-FKHYDKALPHLEAALELAMDIQNDR 219 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 346789999999999999999999999998553 24567789988665 9999999999999998743
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCCchHHHHhhhhhh
Q 020094 240 SDGNILSLYADLIWQAHKDASRAESYFDQAVK-----SAPDDCYVLASYAKFLWDAGDDEEEEQDNEESQ 304 (331)
Q Consensus 240 ~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~-----ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~ 304 (331)
....++.++|.++.. +|++++|+.+|++|++ .+|....++.++|.++.+.|+.++|...++...
T Consensus 220 ~~~~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 288 (378)
T 3q15_A 220 FIAISLLNIANSYDR-SGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGL 288 (378)
T ss_dssp HHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 134678889998888 9999999999999999 788779999999999999999999998887433
No 159
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.13 E-value=2.6e-10 Score=112.40 Aligned_cols=127 Identities=12% Similarity=0.048 Sum_probs=112.9
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
....+++.++...+++++|+.+|+++++..|.+..++...+.+.+...|++++|..+|+++++.+|+++.+|..|+.++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999888888777765555899999999999999999999999999999998
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCchHHHHhhh
Q 020094 254 QAHKDASRAESYFDQAVKSAPDDC----YVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 254 ~~~Gd~deA~~yfekAL~ldP~d~----~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
. .|++++|..+|++|+...|.++ .+|..+..+....|+.+.+.+..+
T Consensus 437 ~-~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~ 487 (530)
T 2ooe_A 437 H-LNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEK 487 (530)
T ss_dssp T-TTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred h-CCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 8 9999999999999999977554 499999999999999888876554
No 160
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=2e-10 Score=100.84 Aligned_cols=125 Identities=12% Similarity=0.099 Sum_probs=93.9
Q ss_pred CCcccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHH
Q 020094 171 GGSGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG----DFAKAEELCGRAILANPSDGNILS 246 (331)
Q Consensus 171 g~~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g----d~ekAee~~erALeldP~d~~al~ 246 (331)
|+..-..+++.+|...+++++|+.+|+++++. +++.++++||.++.. + |+++|+++|++|++ +.++.+++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~--~g~~~~~~~A~~~~~~A~~--~g~~~a~~ 89 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR--NPQQADYPQARQLAEKAVE--AGSKSGEI 89 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS--STTSCCHHHHHHHHHHHHH--TTCHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHHH--CCCHHHHH
Confidence 44555667888888888888888888888764 578888888877543 5 78888888888855 56788887
Q ss_pred HHHHHHHHH---cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 247 LYADLIWQA---HKDASRAESYFDQAVKSAP--DDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 247 ~yA~ll~~~---~Gd~deA~~yfekAL~ldP--~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
+++.++..- .+++++|+.+|++|++..| .++.++++++.+|.. .++.++|...++
T Consensus 90 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 153 (212)
T 3rjv_A 90 VLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFK 153 (212)
T ss_dssp HHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 777666531 4678888888888888777 347788888888888 777888877776
No 161
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.08 E-value=9.2e-11 Score=110.93 Aligned_cols=103 Identities=12% Similarity=-0.001 Sum_probs=58.2
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
...|+|.+|...+++++|+.+|+++|+++|+++.+++++|.++.. .+++++|+.+|++|++++|++..++..++.+...
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~-~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAE-LGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999766 9999999999999999999999999888888665
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCY 278 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~ 278 (331)
..++.+++..+|++++...|++..
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCC
Confidence 478889999999999999997653
No 162
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.08 E-value=3.9e-10 Score=98.90 Aligned_cols=126 Identities=13% Similarity=0.034 Sum_probs=106.1
Q ss_pred CcccccchHHHHHhCC----CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCC--CCH
Q 020094 172 GSGFSGSNNNYSNNNH----GSSSTDAYYEKMIEANPGNALLLGNYARFLKE---VRGDFAKAEELCGRAILANP--SDG 242 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~g----d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~---~~gd~ekAee~~erALeldP--~d~ 242 (331)
+..-..|++.+|.. + ++++|+.+|++++ +++++.++++||.++.. +.+|+++|+++|++|++.+| +++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 125 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAV--EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAV 125 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchH
Confidence 44556788888888 6 8999999999995 56899999999988643 26799999999999999998 458
Q ss_pred HHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-C-----CchHHHHhhh
Q 020094 243 NILSLYADLIWQA---HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA-G-----DDEEEEQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~---~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l-G-----~~eEa~~~~~ 301 (331)
.++++++.++..- .+++++|+.+|++|+++ |.+..++++++.+|... + +.++|..+++
T Consensus 126 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~ 192 (212)
T 3rjv_A 126 DAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLN 192 (212)
T ss_dssp HHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 9998888877652 46899999999999999 77888999999999875 2 7888888876
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.07 E-value=3.7e-10 Score=104.12 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=102.1
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----HHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS--D----GNIL 245 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n------~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~--d----~~al 245 (331)
..+.+|...+++++|+.+|++++.+.+.. ..++.++|.++.. .|++++|+.+|++|+++.+. + ..++
T Consensus 41 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~ 119 (307)
T 2ifu_A 41 KAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKD-LQRMPEAVQYIEKASVMYVENGTPDTAAMAL 119 (307)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 44678999999999999999999997643 4577888888655 89999999999999998543 2 4567
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 246 SLYADLIWQAHKDASRAESYFDQAVKSAPDD------CYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 246 ~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d------~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.+++.++.. |++++|+.+|++|+++.|.. ..++.++|.+|..+|++++|...+++.
T Consensus 120 ~~lg~~~~~--g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 181 (307)
T 2ifu_A 120 DRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKE 181 (307)
T ss_dssp HHHHHHHTT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 677776643 99999999999999998743 578999999999999999999877743
No 164
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.05 E-value=2.5e-09 Score=98.18 Aligned_cols=98 Identities=19% Similarity=0.134 Sum_probs=89.7
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 020094 202 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLA 281 (331)
Q Consensus 202 ~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~ 281 (331)
.-|++...+..+|..+.. .|++++|+..|+++++++|+++.++..++.++.. .|++++|+.+|+++++.+|+....+.
T Consensus 112 ~lp~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~~ 189 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQ-ESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQGL 189 (287)
T ss_dssp HSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHHH
T ss_pred HcCCchhhHHHHHHHHHh-CCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHHH
Confidence 349999999999998766 9999999999999999999999999999999998 99999999999999999998788888
Q ss_pred HHHHHHHHcCCchHHHHhhh
Q 020094 282 SYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 282 ~LA~~L~~lG~~eEa~~~~~ 301 (331)
..+..+...++.+++...++
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~ 209 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQ 209 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHhhcccCccHHHHH
Confidence 88888888899888877766
No 165
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.05 E-value=9.1e-10 Score=100.25 Aligned_cols=124 Identities=11% Similarity=-0.022 Sum_probs=99.9
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALL------LGNYARFLKEVRGDFAKAEELCGRAILANPSD------GNIL 245 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~------l~nLA~~L~~~~gd~ekAee~~erALeldP~d------~~al 245 (331)
+.+..+...+++++|+.+|++++...+.++.. +..+|.++. ..+++++|+++|++|+.+.+.. ..++
T Consensus 80 ~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~ 158 (293)
T 3u3w_A 80 DQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIE 158 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHH-cccCHHHHHHHHHHHHHHhcccccHHHHHHHH
Confidence 34677888999999999999999988887763 224565543 3779999999999999976543 3368
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 246 SLYADLIWQAHKDASRAESYFDQAVKSA-------PDDCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 246 ~~yA~ll~~~~Gd~deA~~yfekAL~ld-------P~d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.++|.++.. .|++++|+.+|++|++.. +....++.++|.+|...|++++|...+++.
T Consensus 159 ~~lg~~y~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 159 NAIANIYAE-NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 888888888 999999999999999631 233468899999999999999998777633
No 166
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.03 E-value=6.1e-09 Score=106.29 Aligned_cols=117 Identities=12% Similarity=0.019 Sum_probs=104.8
Q ss_pred HHhCCCc-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 183 SNNNHGS-SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 183 y~s~gd~-ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd----------~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+...+++ ++|+++|.++|..||++..+|+.-+.++.. .++ +++|++++.++++.+|++..+|...+++
T Consensus 38 ~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~-l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~ 116 (567)
T 1dce_A 38 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 116 (567)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHh-cccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3445555 889999999999999999999999988776 555 9999999999999999999999999999
Q ss_pred HHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CchHHHHhhh
Q 020094 252 IWQAHK--DASRAESYFDQAVKSAPDDCYVLASYAKFLWDAG-DDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~G--d~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG-~~eEa~~~~~ 301 (331)
+.. .+ ++++|+.+++++++++|+|..+|.+.+.++...+ .+++|.+.++
T Consensus 117 l~~-l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~ 168 (567)
T 1dce_A 117 LSR-LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 168 (567)
T ss_dssp HHT-CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHH-cccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 988 99 7799999999999999999999999999999999 6766665554
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.03 E-value=1e-09 Score=91.89 Aligned_cols=118 Identities=11% Similarity=-0.000 Sum_probs=96.3
Q ss_pred HhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHcC
Q 020094 184 NNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL------ANPSDGNILSLYADLIWQAHK 257 (331)
Q Consensus 184 ~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe------ldP~d~~al~~yA~ll~~~~G 257 (331)
...|++++|+++++.+....+..+.++..+|.++.. .|++++|+.+|+++++ ..|....++.+++.++.. .|
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g 80 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAF-MDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM-AG 80 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TT
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-cC
Confidence 346899999997666544333678899999998766 9999999999999999 555677888889998888 99
Q ss_pred CHHHHHHHHHHHHHh---CCC----CHHHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 258 DASRAESYFDQAVKS---APD----DCYVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 258 d~deA~~yfekAL~l---dP~----d~~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
++++|+.+|++++++ .++ ...++.++|.++...|++++|...+++.
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKS 133 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999 443 3567899999999999999998877643
No 168
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.02 E-value=1.9e-09 Score=84.32 Aligned_cols=76 Identities=14% Similarity=0.047 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 226 KAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 226 kAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+|+++|+++++.+|+++.++..++.+++. .|++++|+.+|+++++++|++..+++.+|.++...|++++|...++.
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 78 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAE-HEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWES 78 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 58899999999999999999999999998 99999999999999999999999999999999999999999887763
No 169
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.00 E-value=1e-08 Score=97.39 Aligned_cols=123 Identities=12% Similarity=-0.027 Sum_probs=108.0
Q ss_pred cchHHHHHhCCCc-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-
Q 020094 177 GSNNNYSNNNHGS-SSTDAYYEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPSDGNILSLYADLI- 252 (331)
Q Consensus 177 ~N~A~~y~s~gd~-ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g--d~ekAee~~erALeldP~d~~al~~yA~ll- 252 (331)
.++.......+++ ++|+.++.++|.+||++..+|+.-+.++.. .+ +++++++++.++|+.+|++..+|.....++
T Consensus 36 ~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~-l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~ 114 (306)
T 3dra_A 36 MGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKN-LPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIG 114 (306)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH-cccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHH
Confidence 3444455566666 799999999999999999999999988766 67 999999999999999999999999888888
Q ss_pred ---HHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCch--HHHHhhh
Q 020094 253 ---WQAH---KDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDE--EEEQDNE 301 (331)
Q Consensus 253 ---~~~~---Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~e--Ea~~~~~ 301 (331)
.. . +++++++.+++++++.+|++..+|...+.++...+.++ ++...++
T Consensus 115 ~~~~~-l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~ 170 (306)
T 3dra_A 115 QIMEL-NNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVD 170 (306)
T ss_dssp HHHHH-TTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HHHHh-ccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHH
Confidence 44 5 78999999999999999999999999999999999987 7765554
No 170
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.99 E-value=1.9e-09 Score=100.03 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=104.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCC
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILAN--------PSD 241 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~------~~l~nLA~~L~~~~gd~ekAee~~erALeld--------P~d 241 (331)
..+++.+|...|++++|+.+|++++.+.|... .++.++|.++.. .|++++|+.+|++++++. |..
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA-QGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 56788899999999999999999999866432 235678888665 999999999999999875 344
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 242 GNILSLYADLIWQAHKDASRAESYFDQAVKSAPD-----DCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 242 ~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~-----d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
..++.+++.+++. .|++++|+.+|++++++.+. ...++..++.++...|++++|...+++
T Consensus 135 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~ 199 (373)
T 1hz4_A 135 EFLVRIRAQLLWA-WARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNR 199 (373)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 5677778888888 99999999999999999874 246788999999999999999877763
No 171
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.97 E-value=7e-10 Score=110.18 Aligned_cols=123 Identities=12% Similarity=0.015 Sum_probs=99.0
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL- 251 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l- 251 (331)
.....|+|.+|...+++++|+.+|+++++++|+++.+++++|.++.. .|++++|+++|++|++++|++..++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999999999766 9999999999999999999999999888887
Q ss_pred -HHHHcCCHHHHHHHHH-----------HHHHhCCCC-----------HHHHHHHHHHHHHcCCchHHH
Q 020094 252 -IWQAHKDASRAESYFD-----------QAVKSAPDD-----------CYVLASYAKFLWDAGDDEEEE 297 (331)
Q Consensus 252 -l~~~~Gd~deA~~yfe-----------kAL~ldP~d-----------~~vl~~LA~~L~~lG~~eEa~ 297 (331)
+.. +|++++|+++++ ++++++|+. ...+..+...+...+...+++
T Consensus 119 ~~~~-~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~itl~~l~~lie~l~~~~~l~e~~ 186 (477)
T 1wao_1 119 KIVK-QKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKC 186 (477)
T ss_dssp HHHH-HHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGGGSCCHHHHHHHHHHHHTCCCCCHHH
T ss_pred HHHH-HHHHHHHhccccccchhHhhhhhhhccccccccccccccccccHHHHHHHHHHHHcCCCCCHHH
Confidence 665 899999999999 888887743 233445555566656555443
No 172
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.96 E-value=2.6e-09 Score=102.92 Aligned_cols=93 Identities=12% Similarity=0.004 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAIL----------------ANPSDGNILSLYADLIWQAHKDASRAESYFDQAV 270 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALe----------------ldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL 270 (331)
+..+..+|..++. .+++++|+++|++|++ ++|.+..+|.++|.+++. ++++++|+.+|++|+
T Consensus 223 a~~~~~~g~~~~~-~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 223 SEDLKNIGNTFFK-SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHH
Confidence 4557888988766 9999999999999999 889999999999999998 999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 271 KSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 271 ~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++|++..+++.+|.+|..++++++|...++
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~ 331 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQALADLK 331 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 9999999999999999999999999998887
No 173
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.95 E-value=9.8e-10 Score=95.88 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=73.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 020094 221 RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDA----------SRAESYFDQAVKSAPDDCYVLASYAKFLWDA 290 (331)
Q Consensus 221 ~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~----------deA~~yfekAL~ldP~d~~vl~~LA~~L~~l 290 (331)
.+.|++|++.|++|++++|+++.+|.+++.++.. .+++ ++|+.+|++||+++|++..+|+++|.+|..+
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 5679999999999999999999999999998887 7664 6999999999999999999999999999988
Q ss_pred C-----------CchHHHHhhh
Q 020094 291 G-----------DDEEEEQDNE 301 (331)
Q Consensus 291 G-----------~~eEa~~~~~ 301 (331)
| ++++|.+.++
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHH
T ss_pred cccCcchhhhhccHHHHHHHHH
Confidence 5 8999988777
No 174
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.95 E-value=3.1e-09 Score=99.74 Aligned_cols=98 Identities=13% Similarity=-0.009 Sum_probs=87.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCC---C---CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANP---G---NALLLGNYARFLKEVRGDFAKAEELCGRAIL-----ANPSDGN 243 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP---~---n~~~l~nLA~~L~~~~gd~ekAee~~erALe-----ldP~d~~ 243 (331)
...|+|.+|...+++++|+.+|++++.+.+ + ...++.++|.++.. .|++++|+++|++|++ .+|..+.
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~ 262 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR-SGDDQMAVEHFQKAAKVSREKVPDLLPK 262 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHhhCChhHHH
Confidence 356899999999999999999999999743 1 24578899988766 9999999999999999 8898899
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 244 ILSLYADLIWQAHKDASRAESYFDQAVKSAP 274 (331)
Q Consensus 244 al~~yA~ll~~~~Gd~deA~~yfekAL~ldP 274 (331)
++..+|.+++. .|++++|+.+|++++++.+
T Consensus 263 ~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 263 VLFGLSWTLCK-AGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99999999998 9999999999999999854
No 175
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.95 E-value=1.1e-08 Score=77.45 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=65.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH--HHHHHHH
Q 020094 211 GNYARFLKEVRGDFAKAEELCGRAILANPSDGN-ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVL--ASYAKFL 287 (331)
Q Consensus 211 ~nLA~~L~~~~gd~ekAee~~erALeldP~d~~-al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl--~~LA~~L 287 (331)
++.|..+.. .+++++|+++|+++++.+|+++. ++..+|.+++. .|++++|+.+|+++++++|++..++ ..+..++
T Consensus 4 ~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~ 81 (99)
T 2kc7_A 4 LKTIKELIN-QGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDSPALQARKMVMDIL 81 (99)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 455666555 89999999999999999999999 99999999988 9999999999999999999998887 4444444
Q ss_pred HH
Q 020094 288 WD 289 (331)
Q Consensus 288 ~~ 289 (331)
..
T Consensus 82 ~~ 83 (99)
T 2kc7_A 82 NF 83 (99)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 176
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.94 E-value=4.8e-09 Score=97.23 Aligned_cols=126 Identities=12% Similarity=0.144 Sum_probs=104.0
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL-----LLGNYARFLKEVRGDFAKAEELCGRAILANPSDG------NIL 245 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~-----~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~------~al 245 (331)
...+.++...+++++|+.++++++...|.+.. ++.++|.++.. .|++++|++++++++.+.|... .++
T Consensus 18 ~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 96 (373)
T 1hz4_A 18 ALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHC-KGELTRSLALMQQTEQMARQHDVWHYALWSL 96 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 45677888999999999999999999886532 56777877655 8999999999999999876432 335
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCchHHHHhhhhhh
Q 020094 246 SLYADLIWQAHKDASRAESYFDQAVKSA--------PDDCYVLASYAKFLWDAGDDEEEEQDNEESQ 304 (331)
Q Consensus 246 ~~yA~ll~~~~Gd~deA~~yfekAL~ld--------P~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~ 304 (331)
..++.+++. .|++++|+.+|++++++. |....++.+++.++...|++++|...+++..
T Consensus 97 ~~la~~~~~-~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 162 (373)
T 1hz4_A 97 IQQSEILFA-QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 162 (373)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 678888888 999999999999999986 3345678889999999999999998887433
No 177
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.90 E-value=9.1e-09 Score=100.79 Aligned_cols=124 Identities=16% Similarity=0.127 Sum_probs=95.6
Q ss_pred CcccccchHHHHHhCC---CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 172 GSGFSGSNNNYSNNNH---GSSSTDAYYEKMIEANPGNALLLGNYARFLKEV---RGDFAKAEELCGRAILANPSDGNIL 245 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~g---d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~---~gd~ekAee~~erALeldP~d~~al 245 (331)
++.-..+++.+|...+ ++++|+.+|++++..+|.++..++++|.++... .+|+++|+++|++|+ |+++.++
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 3335678888888888 888888888888888888888888888775331 158888888888887 8888888
Q ss_pred HHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----CchHHHHhhh
Q 020094 246 SLYADLIW--QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAG-----DDEEEEQDNE 301 (331)
Q Consensus 246 ~~yA~ll~--~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG-----~~eEa~~~~~ 301 (331)
++++.+++ ...+++++|+.+|++|++. .+..+++++|.+|. .| +.++|..+++
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~ 311 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFE 311 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHH
Confidence 88888754 3377888888888888764 47888888888887 44 7777777776
No 178
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.90 E-value=1.4e-09 Score=102.82 Aligned_cols=125 Identities=10% Similarity=-0.117 Sum_probs=107.8
Q ss_pred ccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-C-HHHHHHHHHH
Q 020094 174 GFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-D-GNILSLYADL 251 (331)
Q Consensus 174 ~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~-d-~~al~~yA~l 251 (331)
.+...||..|...|+|++|.+.|+.++..+|++. ..+.+|.+++. .+++++|+.+|++++...+. . ..++++++.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~-~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGA-AERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHH-TTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHH-cCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 3566799999999999999999999999999999 88999988665 99999999999988775322 1 3477778888
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 252 IWQAHKDASRAESYFDQAVKSA--PD-DCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 252 l~~~~Gd~deA~~yfekAL~ld--P~-d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+.. .|++++|+.+|++++... |. ..++++++|.++.++|+.+||...++
T Consensus 181 l~~-LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~ 232 (282)
T 4f3v_A 181 AAN-LALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLE 232 (282)
T ss_dssp HHH-TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHH-CCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 877 999999999999998654 54 66799999999999999999998887
No 179
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.88 E-value=8.5e-09 Score=105.24 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=94.7
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPSDGNILSLYADLIWQAHK-DASRAESY 265 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g--d~ekAee~~erALeldP~d~~al~~yA~ll~~~~G-d~deA~~y 265 (331)
+++++++|.++++.+|++..+|+.-+.++.. .+ ++++|++++.+++++||.|..+|...+.++.. .+ .+++|+++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~-l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cccccHHHHHHHHHHHHhhccccccHHHHHHHHHHH-cCCChHHHHHH
Confidence 8999999999999999999999999999766 88 77999999999999999999999888888887 88 89999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHc
Q 020094 266 FDQAVKSAPDDCYVLASYAKFLWDA 290 (331)
Q Consensus 266 fekAL~ldP~d~~vl~~LA~~L~~l 290 (331)
++++++.+|.|..+|.+.+.++..+
T Consensus 167 ~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCccHHHHHHHHHHhh
Confidence 9999999999999999999999986
No 180
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.88 E-value=4.4e-09 Score=105.99 Aligned_cols=122 Identities=10% Similarity=0.006 Sum_probs=100.0
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH--
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDG-- 242 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~-----nP~n~---~~l~nLA~~L~~~~gd~ekAee~~erALel-----dP~d~-- 242 (331)
+.+.-+...|+|++|+..|+++|++ .|+++ ..+.++|.++.. +|+|++|+.+|++++++ .|+++
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 3445577899999999999999997 34554 557788888665 99999999999999976 45655
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHcCCchHHHHhhh
Q 020094 243 -NILSLYADLIWQAHKDASRAESYFDQAVKS-----APDDCY---VLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 243 -~al~~yA~ll~~~~Gd~deA~~yfekAL~l-----dP~d~~---vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
..+.++|.+++. +|++++|+.+|++|+++ .|+++. ++..++.++..++.+++|+..++
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~ 459 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYH 459 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556778888888 99999999999999987 566654 55688899999999999987766
No 181
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.87 E-value=1e-08 Score=80.79 Aligned_cols=72 Identities=19% Similarity=0.063 Sum_probs=66.8
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 020094 203 NPGNALLLGNYARFLKEVRGD---FAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (331)
Q Consensus 203 nP~n~~~l~nLA~~L~~~~gd---~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d 276 (331)
+|+++.++..||.+++. .++ .++|..++++|+++||+++.++..+|..+++ .|+|++|+.+|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~-~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY-LHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHH-TTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Confidence 79999999999999876 444 7999999999999999999999999999998 999999999999999999974
No 182
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.87 E-value=9.2e-09 Score=81.26 Aligned_cols=99 Identities=10% Similarity=0.019 Sum_probs=83.9
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPS------DG 242 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n------~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~------d~ 242 (331)
...++|.+|...+++++|+.+|++++...+.. ..++.++|.++.. .+++++|++++++++++.+. .+
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 45688999999999999999999999986543 5678889988766 99999999999999987432 25
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 243 NILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (331)
Q Consensus 243 ~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~ 275 (331)
.++..++.+++. .|++++|+.+|++++++...
T Consensus 130 ~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTA-LGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHH
Confidence 677788888888 99999999999999988653
No 183
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.84 E-value=4.3e-08 Score=93.15 Aligned_cols=103 Identities=10% Similarity=0.072 Sum_probs=51.5
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 020094 188 GSSSTDAYYEKMIEANPGNALLLGNYARFL----KEVR---GDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDAS 260 (331)
Q Consensus 188 d~ekA~e~yerAL~~nP~n~~~l~nLA~~L----~~~~---gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~d 260 (331)
.+++++.++.++|..||++..+|..-+.++ .. . +++++++.++.++++.+|.|..+|...+.++.. .++++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~-l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~-l~~~~ 161 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMEL-NNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDT-FDLHN 161 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH-TTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCTT
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHh-ccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hcccC
Confidence 445555555555555555555555444444 22 2 445555555555555555555555444444444 44444
Q ss_pred --HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 020094 261 --RAESYFDQAVKSAPDDCYVLASYAKFLWDAGD 292 (331)
Q Consensus 261 --eA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~ 292 (331)
+++.+++++++.+|.|..+|.+.+.++...+.
T Consensus 162 ~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 162 DAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 55555555555555555555555555444443
No 184
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.83 E-value=5.4e-08 Score=94.83 Aligned_cols=121 Identities=12% Similarity=0.056 Sum_probs=63.1
Q ss_pred cccccchHHHHHh----CCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCCHH
Q 020094 173 SGFSGSNNNYSNN----NHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVR-----GDFAKAEELCGRAILANPSDGN 243 (331)
Q Consensus 173 ~~~~~N~A~~y~s----~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~-----gd~ekAee~~erALeldP~d~~ 243 (331)
.....+++.+|.. .+++++|+.+|+++++. +++.+++++|.++.. . +++++|+++|++|++. +++.
T Consensus 255 ~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~-~~~g~~~~~~~A~~~~~~a~~~--~~~~ 329 (490)
T 2xm6_A 255 SIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDK-GAEGVAKNREQAISWYTKSAEQ--GDAT 329 (490)
T ss_dssp HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHH-CBTTBCCCHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCcCCHHHHHHHHHHHHhc--CCHH
Confidence 3334455555555 55555666666555433 455555555555433 3 4555555555555554 2344
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 244 ILSLYADLIWQAHK---DASRAESYFDQAVKSAPDDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 244 al~~yA~ll~~~~G---d~deA~~yfekAL~ldP~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
+++.++.+++. .| ++++|+.+|++|++. .+..++++++.+|.. .++.++|..+++
T Consensus 330 a~~~lg~~y~~-~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~ 391 (490)
T 2xm6_A 330 AQANLGAIYFR-LGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMR 391 (490)
T ss_dssp HHHHHHHHHHH-SCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 55455554444 33 455555555555554 345555555555555 455555555444
No 185
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.82 E-value=6.4e-08 Score=94.28 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=107.8
Q ss_pred CCcccccchHHHHHhC-----CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCH
Q 020094 171 GGSGFSGSNNNYSNNN-----HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILANPSDG 242 (331)
Q Consensus 171 g~~~~~~N~A~~y~s~-----gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g---d~ekAee~~erALeldP~d~ 242 (331)
|+..-..+++.+|... +++++|+.+|+++++. +++.+++++|.++.. .+ ++++|+++|++|++. +++
T Consensus 289 ~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~a~~~--~~~ 363 (490)
T 2xm6_A 289 GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFR-LGSEEEHKKAVEWFRKAAAK--GEK 363 (490)
T ss_dssp TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH-SCCHHHHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHh-CCCcccHHHHHHHHHHHHHC--CCH
Confidence 5556677899999988 8999999999999886 578899999998765 45 899999999999997 679
Q ss_pred HHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 243 NILSLYADLIWQA---HKDASRAESYFDQAVKSAPDDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 243 ~al~~yA~ll~~~---~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
.++++++.++..- .+++++|+.+|++|++. .+..++.+++.+|.. .++.++|..+++
T Consensus 364 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 427 (490)
T 2xm6_A 364 AAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFD 427 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 9998888877642 58999999999999986 478999999999999 899999998887
No 186
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.80 E-value=2.8e-08 Score=97.32 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=95.9
Q ss_pred cchHHHHHhC----CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 177 GSNNNYSNNN----HGSSSTDAYYEKMIEANPGNALLLGNYARFLK--EVRGDFAKAEELCGRAILANPSDGNILSLYAD 250 (331)
Q Consensus 177 ~N~A~~y~s~----gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~--~~~gd~ekAee~~erALeldP~d~~al~~yA~ 250 (331)
.|++.+|... +++++|+.+|++++ |+++.+++++|.+++ ...+|+++|+++|++|++. +++.++++++.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHH
Confidence 6788888665 68899999999987 899999999998854 4478999999999999875 48888888887
Q ss_pred HHHHHcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 251 LIWQAHK-----DASRAESYFDQAVKSAPDDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 251 ll~~~~G-----d~deA~~yfekAL~ldP~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
++. .| ++++|+.+|++|. +.+..+++++|.+|.. ..+.++|..+++
T Consensus 292 ~y~--~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~ 346 (452)
T 3e4b_A 292 LYY--EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLL 346 (452)
T ss_dssp HHH--HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHH
T ss_pred HHH--cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHH
Confidence 666 45 8999999999998 8899999999988887 347888888877
No 187
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.79 E-value=6.1e-08 Score=94.18 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=101.6
Q ss_pred hHHHHHhC-CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 020094 179 NNNYSNNN-HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG-DFAKAEELCGRAILANPSDGNILSLYADLIWQAH 256 (331)
Q Consensus 179 ~A~~y~s~-gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g-d~ekAee~~erALeldP~d~~al~~yA~ll~~~~ 256 (331)
+-+..... ...++|++++.++|.+||++..+|+.-+.++.. .+ ++++++.++.++++.+|++..+|.....++....
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~-l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~ 137 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTS-LNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRIS 137 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 33333344 445899999999999999999999999988776 66 6999999999999999999999999999888733
Q ss_pred C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCch
Q 020094 257 K-DASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDE 294 (331)
Q Consensus 257 G-d~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~e 294 (331)
+ ++++++.+++++++.+|+|..+|...+.++...+.++
T Consensus 138 ~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 138 PQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp CSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 7 8999999999999999999999999999999988876
No 188
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.75 E-value=2.2e-07 Score=89.55 Aligned_cols=118 Identities=12% Similarity=0.008 Sum_probs=100.2
Q ss_pred HHHhCCCc-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 182 YSNNNHGS-SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPSDGNILSLYAD 250 (331)
Q Consensus 182 ~y~s~gd~-ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd----------~ekAee~~erALeldP~d~~al~~yA~ 250 (331)
.....+++ ++|+.++.++|.+||++.-+|+.-+.++.. .++ +++++.++.+++..+|.+..+|...++
T Consensus 38 ~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~-l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~w 116 (331)
T 3dss_A 38 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCW 116 (331)
T ss_dssp HHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHH-hcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34456666 689999999999999999999988877655 333 789999999999999999999999988
Q ss_pred HHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc-hHHHHhhh
Q 020094 251 LIWQAHK--DASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDD-EEEEQDNE 301 (331)
Q Consensus 251 ll~~~~G--d~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~-eEa~~~~~ 301 (331)
++.. .+ ++++++.++.++++.+|.|..+|.+.+.++...+.. +++...++
T Consensus 117 lL~~-l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 117 LLSR-LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHH-CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHhc-cCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 8887 77 489999999999999999999999999999999984 56654443
No 189
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.74 E-value=1.2e-07 Score=78.38 Aligned_cols=106 Identities=16% Similarity=0.117 Sum_probs=89.3
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCHHHHH
Q 020094 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA---HKDASRAE 263 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~---~Gd~deA~ 263 (331)
.++++|+.+|+++.+.+..... +|.++.. ....++|+++|++|++. .++.++++++.++..- .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~-g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSNS-QINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTCT-TSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHHc-CCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5789999999999998754444 7877544 67788899999999997 6899998888776641 57999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH----cCCchHHHHhhh
Q 020094 264 SYFDQAVKSAPDDCYVLASYAKFLWD----AGDDEEEEQDNE 301 (331)
Q Consensus 264 ~yfekAL~ldP~d~~vl~~LA~~L~~----lG~~eEa~~~~~ 301 (331)
.+|++|.+. .++..+++++.+|.. .++.++|..+++
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~ 121 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFE 121 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHH
Confidence 999999886 689999999999999 899999988887
No 190
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.74 E-value=3.4e-08 Score=76.47 Aligned_cols=64 Identities=20% Similarity=0.225 Sum_probs=58.9
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 237 ANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 237 ldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.+|+++.+++.+|.+++. .|++++|+.+|+++++++|++..+|+.+|.+|...|++++|...++
T Consensus 2 ~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK-HDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp ---CCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 589999999999999998 9999999999999999999999999999999999999999988776
No 191
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.74 E-value=5.6e-08 Score=84.34 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=86.5
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHH
Q 020094 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILAN-P-SDGNILSLYADLIWQAHKDASRA 262 (331)
Q Consensus 188 d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g---d~ekAee~~erALeld-P-~d~~al~~yA~ll~~~~Gd~deA 262 (331)
....+++.|.+.+..++.+.++.++||.+|.. .. +.++++.+++.+++.+ | ++.++++++|..++. .++|++|
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~A 90 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHHH
Confidence 45788999999999999999999999999876 55 6779999999999999 7 678999999999988 9999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 263 ESYFDQAVKSAPDDCYVLASYAKFL 287 (331)
Q Consensus 263 ~~yfekAL~ldP~d~~vl~~LA~~L 287 (331)
++|++++++++|+|..+..-.-.+-
T Consensus 91 ~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999999999988766554443
No 192
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.72 E-value=1.6e-07 Score=90.56 Aligned_cols=101 Identities=13% Similarity=-0.032 Sum_probs=76.6
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----------
Q 020094 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD-FAKAEELCGRAILANPSDGNILSLYADLIWQAH---------- 256 (331)
Q Consensus 188 d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd-~ekAee~~erALeldP~d~~al~~yA~ll~~~~---------- 256 (331)
.+++++.+|.++++.+|.|..+|..-+.++.. .+. ++++++++.++|+.+|.|..+|...+.++.. .
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~-l~~~~~~~~~~ 202 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQ-LHPQPDSGPQG 202 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-HSCCC------
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hhhcccccccc
Confidence 36788888888888888888888777777655 666 5788888888888888888888777776665 4
Q ss_pred ----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 020094 257 ----KDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA 290 (331)
Q Consensus 257 ----Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l 290 (331)
+.+++++.++.+++..+|+|..+|..+..++...
T Consensus 203 ~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~ 240 (331)
T 3dss_A 203 RLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAG 240 (331)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSS
T ss_pred ccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 4577888888888888888888887666666555
No 193
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.66 E-value=1.5e-07 Score=91.39 Aligned_cols=111 Identities=6% Similarity=-0.017 Sum_probs=100.2
Q ss_pred HHHHhCC-CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 020094 181 NYSNNNH-GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRG-DFAKAEELCGRAILANPSDGNILSLYADLIWQAHKD 258 (331)
Q Consensus 181 ~~y~s~g-d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~g-d~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd 258 (331)
.++...+ .+++++.++.++|..+|++..+|..-+.++....+ +++++++++.++++++|.|..+|.....++.. .+.
T Consensus 96 ~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~-l~~ 174 (349)
T 3q7a_A 96 SLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH-FST 174 (349)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hcc
Confidence 4555666 58999999999999999999999999999877437 89999999999999999999999888888776 777
Q ss_pred HH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 020094 259 AS--------RAESYFDQAVKSAPDDCYVLASYAKFLWDAGD 292 (331)
Q Consensus 259 ~d--------eA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~ 292 (331)
++ +++.+++++++.+|.|..+|.+.+.++..++.
T Consensus 175 ~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 175 LGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred ccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 77 99999999999999999999999999999986
No 194
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.66 E-value=3.1e-07 Score=72.49 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 206 NALLLGNYARFLKEVRGDFAKAEELCGRAILAN-------PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCY 278 (331)
Q Consensus 206 n~~~l~nLA~~L~~~~gd~ekAee~~erALeld-------P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~ 278 (331)
++...+.+|.+++. .++|.+|+.+|++|++.. +..+.++..++.+++. +|++++|+.++++|++++|++..
T Consensus 4 sa~dc~~lG~~~~~-~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~~~ 81 (104)
T 2v5f_A 4 TAEDCFELGKVAYT-EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEHQR 81 (104)
T ss_dssp CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHH-ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHH
Confidence 45566778888776 899999999999999863 3567888888888888 99999999999999999999998
Q ss_pred HHHHHHHH
Q 020094 279 VLASYAKF 286 (331)
Q Consensus 279 vl~~LA~~ 286 (331)
++.+++.+
T Consensus 82 ~~~n~~~~ 89 (104)
T 2v5f_A 82 ANGNLKYF 89 (104)
T ss_dssp HHHHHHHH
T ss_pred HHhhHHHH
Confidence 88888733
No 195
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.63 E-value=3.8e-07 Score=75.23 Aligned_cols=100 Identities=16% Similarity=0.103 Sum_probs=83.8
Q ss_pred hHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 020094 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKE---VRGDFAKAEELCGRAILANPSDGNILSLYADLIWQA 255 (331)
Q Consensus 179 ~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~---~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~ 255 (331)
++.+|.....+++|+.+|+++.+. +++.+.+++|.++.. +.+|+++|+++|++|++. .++.++++++.++..-
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 888888888999999999999887 789999999998654 268999999999999987 7899998888777642
Q ss_pred ---cCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 256 ---HKDASRAESYFDQAVKSAPDDCYVLASYA 284 (331)
Q Consensus 256 ---~Gd~deA~~yfekAL~ldP~d~~vl~~LA 284 (331)
.+++++|+.+|++|.+.. +.....+++
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred CCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 589999999999999974 455555554
No 196
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.60 E-value=1e-07 Score=90.90 Aligned_cols=89 Identities=13% Similarity=0.179 Sum_probs=80.1
Q ss_pred CCcHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCCH
Q 020094 187 HGSSSTDAYYEKMIEANPG--NALLLGNYARFLKEV----RGDFAKAEELCGRAILANPSD-GNILSLYADLIWQAHKDA 259 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~--n~~~l~nLA~~L~~~----~gd~ekAee~~erALeldP~d-~~al~~yA~ll~~~~Gd~ 259 (331)
.....|+..++++++++|+ +..++..+|.++..+ .|+.++|+++|+|||+++|+. ..+++.|+.++...++++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 4568999999999999999 777999999886552 499999999999999999975 999999999998745999
Q ss_pred HHHHHHHHHHHHhCCC
Q 020094 260 SRAESYFDQAVKSAPD 275 (331)
Q Consensus 260 deA~~yfekAL~ldP~ 275 (331)
++|.+++++|++++|.
T Consensus 257 ~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 257 AGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHcCCCC
Confidence 9999999999999885
No 197
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.54 E-value=2.7e-07 Score=87.20 Aligned_cols=114 Identities=10% Similarity=-0.127 Sum_probs=93.8
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhC-CCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEAN-PGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PS-DGNILSLYA 249 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~n-P~n-~~~l~nLA~~L~~~~gd~ekAee~~erALeld--P~-d~~al~~yA 249 (331)
..++.+..+...+++++|+.+|++++... |.. ..+++++|.++.. .|++++|+.+|++++... |. .+.+++.++
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~g 215 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LALFTEAERRLTEANDSPAGEACARAIAWYLA 215 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CCCHHHHHHHHHHHhcCCCCccccHHHHHHHH
Confidence 56788899999999999999999887653 221 3578999999766 999999999999999654 55 667888899
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAG 291 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG 291 (331)
.++.. +|+.++|..+|+++++.+|+ ..++..|...-....
T Consensus 216 laL~~-lGr~deA~~~l~~a~a~~P~-~~~~~aL~~~~~~~~ 255 (282)
T 4f3v_A 216 MARRS-QGNESAAVALLEWLQTTHPE-PKVAAALKDPSYRLK 255 (282)
T ss_dssp HHHHH-HTCHHHHHHHHHHHHHHSCC-HHHHHHHHCTTCCCC
T ss_pred HHHHH-cCCHHHHHHHHHHHHhcCCc-HHHHHHHhCCCCCCC
Confidence 98888 99999999999999999998 887776654444333
No 198
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.51 E-value=4.5e-07 Score=89.98 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=77.2
Q ss_pred hCCCcHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHH
Q 020094 185 NNHGSSSTDAYYEKMIEA-----NPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDG---NILSLY 248 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~-----nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALel-----dP~d~---~al~~y 248 (331)
..|+|++|+..|+++|++ .|+++. .+.++|.++.. +|+|++|+.+|++++++ .|+++ ..++++
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 347889999999999996 456655 56788888665 99999999999999976 45555 457788
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 020094 249 ADLIWQAHKDASRAESYFDQAVKS-----APDDCYVLA 281 (331)
Q Consensus 249 A~ll~~~~Gd~deA~~yfekAL~l-----dP~d~~vl~ 281 (331)
|.+++. +|++++|+.+|++|+++ .|+++.+..
T Consensus 389 a~~~~~-qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 389 GRLYMG-LENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHh-ccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 888888 99999999999999987 677776643
No 199
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.49 E-value=5.9e-07 Score=85.96 Aligned_cols=119 Identities=12% Similarity=0.015 Sum_probs=99.5
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHH-
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANP--GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-----DGNILSLY- 248 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP--~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~-----d~~al~~y- 248 (331)
.-+|..|...|++++|+.+|.+.|..+| ++.+++...+.++.. .|+.+.|.+.++++.+.+|+ +.... .+
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~-~La 181 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-NNNVSTASTIFDNYTNAIEDTVSGDNEMIL-NLA 181 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCccccccchHHHH-HHH
Confidence 5688899999999999999999999997 888888888888665 99999999999999999993 44443 34
Q ss_pred -HHHHHHHcC--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 249 -ADLIWQAHK--DASRAESYFDQAVKSAPD--DCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 249 -A~ll~~~~G--d~deA~~yfekAL~ldP~--d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++... .| ++.+|..+|+++.+..|+ ....+++ ++..+|+++||++.++
T Consensus 182 ea~v~l~-~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~ 235 (310)
T 3mv2_B 182 ESYIKFA-TNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVE 235 (310)
T ss_dssp HHHHHHH-HTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHH
T ss_pred HHHHHHH-hCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHH
Confidence 444554 55 899999999999888886 4556666 8999999999999887
No 200
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.47 E-value=3.3e-07 Score=89.87 Aligned_cols=112 Identities=8% Similarity=-0.021 Sum_probs=88.3
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--cC--C---HHHHHHHHH--HHHHhCCCCHHHHHHHHHHHHHHcCC
Q 020094 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEV--RG--D---FAKAEELCG--RAILANPSDGNILSLYADLIWQAHKD 258 (331)
Q Consensus 188 d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~--~g--d---~ekAee~~e--rALeldP~d~~al~~yA~ll~~~~Gd 258 (331)
++.+|+.+|++|++++|+++.++..++.++... .+ . .....+.++ .++.++|.++.++..++..++. .|+
T Consensus 214 ~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~-~gd 292 (372)
T 3ly7_A 214 SLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALV-KGK 292 (372)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh-CCC
Confidence 458999999999999999999998777554321 11 1 111111222 2346789999999888888887 899
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 259 ASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 259 ~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++|+.++++|++++| +...|..+|.++...|+.++|...++
T Consensus 293 ~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~ 334 (372)
T 3ly7_A 293 TDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYL 334 (372)
T ss_dssp HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999997 57788899999999999999998886
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.44 E-value=1.3e-06 Score=68.73 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=65.0
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEAN-------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYA 249 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~n-------P~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA 249 (331)
..+|..++..++|..|+..|++|+... +..+.++.+||.+++. .|++++|+.++++|++++|++..++.++.
T Consensus 9 ~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 9 FELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 468899999999999999999999973 3568899999999876 99999999999999999999999987776
No 202
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.43 E-value=5.4e-07 Score=89.07 Aligned_cols=105 Identities=10% Similarity=-0.053 Sum_probs=81.8
Q ss_pred HHHHhCCCcHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HH
Q 020094 181 NYSNNNHGSSSTDAYYEKMIEA-----NPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDG---NI 244 (331)
Q Consensus 181 ~~y~s~gd~ekA~e~yerAL~~-----nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALel-----dP~d~---~a 244 (331)
.-+...++|++|+..|++++++ .|+++. .+.++|.++.. +|+|++|+.++++++++ .|+++ ..
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 3456778999999999999986 355554 56788888655 99999999999999966 45555 45
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH---HHHHHHH
Q 020094 245 LSLYADLIWQAHKDASRAESYFDQAVKS-----APDDCYVL---ASYAKFL 287 (331)
Q Consensus 245 l~~yA~ll~~~~Gd~deA~~yfekAL~l-----dP~d~~vl---~~LA~~L 287 (331)
++++|.+++. +|++++|+.+|++|+++ .|+++.+. .+++.+.
T Consensus 374 l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 423 (429)
T 3qwp_A 374 VMKVGKLQLH-QGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECD 423 (429)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 6678888888 99999999999999987 67776654 3344444
No 203
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.37 E-value=1.1e-06 Score=91.81 Aligned_cols=125 Identities=12% Similarity=0.077 Sum_probs=108.7
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEA-NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~-nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
-..|+++..+.++.+.|..+|.+|++. .+....++..+|.+.+...+++++|..+|+++++..|+++.+|..|+.+.+.
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 345677878889999999999999998 5566788888887765544569999999999999999999999999999888
Q ss_pred HcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 255 AHKDASRAESYFDQAVKSAP---DDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP---~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.|+.++|..+|++|+...| +...+|..+..+..+.|+.+.+.+..+
T Consensus 517 -~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~ 565 (679)
T 4e6h_A 517 -VNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEK 565 (679)
T ss_dssp -HTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999998 456899999999999999988876655
No 204
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.33 E-value=4.5e-06 Score=87.33 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=31.7
Q ss_pred cchHHHHHhCCCcHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 177 GSNNNYSNNNHGSSSTD-AYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~-e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
..||.++...++.++|. ..|++++...|.+..++..||.+... .+++++|.++|++++.
T Consensus 347 ~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 347 FNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 44555555555555554 55555555555555555555555333 5555555555555554
No 205
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.31 E-value=1.4e-06 Score=81.75 Aligned_cols=125 Identities=11% Similarity=0.034 Sum_probs=102.0
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL------LLGNYARFLKEVRGDFAKAEELCGRAILANPS------DGN 243 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~------~l~nLA~~L~~~~gd~ekAee~~erALeldP~------d~~ 243 (331)
..+++..|...|++++|+++|++++...+.... +...++.+. ...+++++|++++++++...+. ...
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFE-QVPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHC-SCCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 468999999999999999999999998665433 334455553 3378999999999999986432 367
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 244 ILSLYADLIWQAHKDASRAESYFDQAVKS------APDDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 244 al~~yA~ll~~~~Gd~deA~~yfekAL~l------dP~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
++..++.++.. .|++++|..++++++.. .+....++..++.++...+++++|...++.
T Consensus 137 ~~~~la~~~~~-~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 200 (434)
T 4b4t_Q 137 LSIKLATLHYQ-KKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTA 200 (434)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHH-ccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 78889998888 99999999999999987 234467999999999999999999887763
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.29 E-value=1.4e-06 Score=81.66 Aligned_cols=126 Identities=6% Similarity=-0.004 Sum_probs=100.2
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNAL-----------------LLGNYARFLKEVRGDFAKAEELCGRAILANP 239 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~-----------------~l~nLA~~L~~~~gd~ekAee~~erALeldP 239 (331)
..-|+-+...++|++|++.|.+++..+|...+ ++.++|.++.. .|++++|.+++.+++...+
T Consensus 8 l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~-~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 8 LEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVT-MGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 34567788889999999999999999987643 47889988766 9999999999999998876
Q ss_pred CCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCchHHHHhhhhhh
Q 020094 240 SDGN------ILSLYADLIWQAHKDASRAESYFDQAVKSAP------DDCYVLASYAKFLWDAGDDEEEEQDNEESQ 304 (331)
Q Consensus 240 ~d~~------al~~yA~ll~~~~Gd~deA~~yfekAL~ldP------~d~~vl~~LA~~L~~lG~~eEa~~~~~~~~ 304 (331)
.... ++..++.++.. .+++++|+.++++++...+ .-..++.++|.++...|++++|...+++..
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~ 162 (434)
T 4b4t_Q 87 QFAKSKTVKVLKTLIEKFEQV-PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLL 162 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHCSC-CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HccchHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHH
Confidence 5432 23233343344 7999999999999998754 226788999999999999999988776443
No 207
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.28 E-value=2.8e-06 Score=66.63 Aligned_cols=71 Identities=13% Similarity=-0.011 Sum_probs=61.8
Q ss_pred CcccccchHHHHHhCCC---cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 172 GSGFSGSNNNYSNNNHG---SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (331)
Q Consensus 172 ~~~~~~N~A~~y~s~gd---~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~ 243 (331)
++.....+|.++...++ .++|..+++++|+++|+++.++..+|.+++. .|+|++|+.+|+++++.+|.++.
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCcc
Confidence 44556678888865554 6999999999999999999999999999777 99999999999999999998443
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.24 E-value=4.8e-06 Score=79.40 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHHHH--H--cC------CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-----CCHHHHHHH
Q 020094 203 NPGNALLLGNYARFLKE--V--RG------DFAKAEELCGRAILANPS--DGNILSLYADLIWQAH-----KDASRAESY 265 (331)
Q Consensus 203 nP~n~~~l~nLA~~L~~--~--~g------d~ekAee~~erALeldP~--d~~al~~yA~ll~~~~-----Gd~deA~~y 265 (331)
+|++++.++..|..... . .+ ...+|...++|||++||+ ++.+|..++.+++. . |+.++|+++
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~-vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAA-APESFGGGMEKAHTA 226 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHH-SCTTTTCCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHh-CCCccCCCHHHHHHH
Confidence 56667766666644322 1 13 368899999999999999 77799777766655 4 999999999
Q ss_pred HHHHHHhCCC-CHHHHHHHHHHHHHc-CCchHHHHhhh
Q 020094 266 FDQAVKSAPD-DCYVLASYAKFLWDA-GDDEEEEQDNE 301 (331)
Q Consensus 266 fekAL~ldP~-d~~vl~~LA~~L~~l-G~~eEa~~~~~ 301 (331)
|+||++++|+ +..+++.+|.+|... ++.++++..++
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~ 264 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALD 264 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHH
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 9999999996 499999999999985 88999888877
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.21 E-value=4.8e-06 Score=79.67 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=93.9
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP--SDGNILSLYADLIWQA 255 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP--~d~~al~~yA~ll~~~ 255 (331)
-||.++. ..|+.+|++.+...+.+...+..+|.++.. .|++++|+++|.+.|..+| ++..++...+.++..
T Consensus 76 ~la~~~~-----~~a~~~l~~l~~~~~~~~~~~~~la~i~~~-~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~- 148 (310)
T 3mv2_B 76 LYVQFLD-----TKNIEELENLLKDKQNSPYELYLLATAQAI-LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALL- 148 (310)
T ss_dssp HHHHHHT-----TTCCHHHHHTTTTSCCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH-
T ss_pred HHHHHhc-----ccHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH-
Confidence 3566664 228899999998876777777788888766 8999999999999999997 888998778777777
Q ss_pred cCCHHHHHHHHHHHHHhCCC----CHHHHHHH--HHHHHHcC--CchHHHHhhhh
Q 020094 256 HKDASRAESYFDQAVKSAPD----DCYVLASY--AKFLWDAG--DDEEEEQDNEE 302 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP~----d~~vl~~L--A~~L~~lG--~~eEa~~~~~~ 302 (331)
+|+.++|.+.++++.+.+|+ +..++..+ +++....| +.++|...++|
T Consensus 149 ~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~E 203 (310)
T 3mv2_B 149 NNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEE 203 (310)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 99999999999999999993 33344444 44466556 89999888873
No 210
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.20 E-value=1.9e-06 Score=86.71 Aligned_cols=96 Identities=10% Similarity=0.078 Sum_probs=78.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDG 242 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~-----nP~n~---~~l~nLA~~L~~~~gd~ekAee~~erALel-----dP~d~ 242 (331)
..|+|.+|...|+|++|+.+|+++|++ -|++| ..+++||.++.. +|+|++|+.+|++|+++ .|+++
T Consensus 354 ~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~~lG~~Hp 432 (490)
T 3n71_A 354 LSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLVTHGPSHP 432 (490)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 779999999999999999999999987 35554 457889988766 99999999999999975 68887
Q ss_pred HHHH---HHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 020094 243 NILS---LYADLIWQAHKDASRAESYFDQAVKSA 273 (331)
Q Consensus 243 ~al~---~yA~ll~~~~Gd~deA~~yfekAL~ld 273 (331)
.+.. +++.+..+ ++.+++|+..|.+|.+..
T Consensus 433 ~~~~~~~~l~~~~~e-~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 433 ITKDLEAMRMQTEME-LRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 6664 44444555 888999999999886543
No 211
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.11 E-value=4.1e-05 Score=76.51 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=99.0
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHH-----------------------------------
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFL----------------------------------- 217 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L----------------------------------- 217 (331)
+-+-.+||.++...++.++|...|++++.. |.+..++..|+.+.
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 345678999999999999999999999999 99877776666541
Q ss_pred ----HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 020094 218 ----KEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDD 293 (331)
Q Consensus 218 ----~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~ 293 (331)
....++.++|...|.+| +..+....+|..+|.+.+...++.++|...|+++++..|+++..+..++.++...|+.
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~ 370 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDE 370 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH
Confidence 01145678899999999 4333466777777777776344799999999999999999888888888888888888
Q ss_pred hHHHHhhh
Q 020094 294 EEEEQDNE 301 (331)
Q Consensus 294 eEa~~~~~ 301 (331)
+.+...++
T Consensus 371 ~~aR~l~e 378 (493)
T 2uy1_A 371 ENARALFK 378 (493)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87766655
No 212
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.06 E-value=3.4e-05 Score=86.54 Aligned_cols=114 Identities=9% Similarity=0.026 Sum_probs=86.1
Q ss_pred cccccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------------
Q 020094 173 SGFSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS------------ 240 (331)
Q Consensus 173 ~~~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~------------ 240 (331)
+...+++|..+...|++++|+.+|.++ +++..+...|.++.. .|+|++|+++|..|++.+++
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL~mArk~~~e~~Idt~LafaYA 1178 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYLQMARKKARESYVETELIFALA 1178 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhcccccccHHHHHHHH
Confidence 445668888888888888888888775 888888888888655 88888888888877755533
Q ss_pred ---------------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 241 ---------------DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 241 ---------------d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+...+..+|..++. .|+|++|..+|.+| ..|..++.+|.++|++++|.+.++
T Consensus 1179 Kl~rleele~fI~~~n~ad~~~iGd~le~-eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaar 1245 (1630)
T 1xi4_A 1179 KTNRLAELEEFINGPNNAHIQQVGDRCYD-EKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGAR 1245 (1630)
T ss_pred hhcCHHHHHHHHhCCCHHHHHHHHHHHHh-cCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHH
Confidence 11233356676776 88888888888886 468888888888888888877665
No 213
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.01 E-value=4.4e-05 Score=64.17 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=82.2
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 020094 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGD---FAKAEELCGRAILAN-P-SDGNILSLYADLIWQAHKDASR 261 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd---~ekAee~~erALeld-P-~d~~al~~yA~ll~~~~Gd~de 261 (331)
.....+...|.+.+..++.+..+.++||+.|.. -.+ ..+++.+++..+..+ | ..-++++.+|..++. .|+|++
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~-S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~ 92 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR-TRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTT-SSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHH
Confidence 456788899999999999999999999999765 444 455999999999987 5 677888889999998 999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHH
Q 020094 262 AESYFDQAVKSAPDDCYVLASYAK 285 (331)
Q Consensus 262 A~~yfekAL~ldP~d~~vl~~LA~ 285 (331)
|+.|++..|+.+|+|..+..-...
T Consensus 93 A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHH
Confidence 999999999999999877544433
No 214
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.97 E-value=2.1e-05 Score=78.81 Aligned_cols=100 Identities=10% Similarity=0.041 Sum_probs=50.4
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW--- 253 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~--- 253 (331)
.++++.|+..|.+++|+.+|.++ ..+..+|.++.. .|+|++|++.|++| +++.+|......+.
T Consensus 126 ~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~-Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 126 QQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVH-LGEYQAAVDGARKA-----NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp -----------CTTTHHHHHHHT--------TCHHHHHHHHHT-TTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHH-hccHHHHHHHHHHc-----CCchhHHHHHHHHHHcC
Confidence 34445555556666666666554 345555555544 56666666666665 24444444333333
Q ss_pred --------------------------HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 020094 254 --------------------------QAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA 290 (331)
Q Consensus 254 --------------------------~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l 290 (331)
++.|++++|+.+|++++.+++.+..++..++.+|.+-
T Consensus 192 ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 192 EFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp CHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 3366666666666666666666666666666666543
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.95 E-value=2e-05 Score=68.20 Aligned_cols=71 Identities=7% Similarity=-0.069 Sum_probs=64.2
Q ss_pred cccchHHHHHhCC---CcHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 020094 175 FSGSNNNYSNNNH---GSSSTDAYYEKMIEAN-P-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILS 246 (331)
Q Consensus 175 ~~~N~A~~y~s~g---d~ekA~e~yerAL~~n-P-~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~ 246 (331)
-..|||-++.... ++++++.+++.+++.+ | ++.+.++++|..++. .++|++|.++++++++++|+|..+..
T Consensus 34 ~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 34 TQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 4568999999987 7789999999999999 7 678999999988765 99999999999999999999999984
No 216
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.95 E-value=1.3e-05 Score=79.43 Aligned_cols=80 Identities=10% Similarity=0.057 Sum_probs=67.9
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHH
Q 020094 221 RGDFAKAEELCGRAILA-----NPSDGNI---LSLYADLIWQAHKDASRAESYFDQAVKS-----APDD---CYVLASYA 284 (331)
Q Consensus 221 ~gd~ekAee~~erALel-----dP~d~~a---l~~yA~ll~~~~Gd~deA~~yfekAL~l-----dP~d---~~vl~~LA 284 (331)
.|+|++|+.+|++++++ .|+++.+ +.+++.++.. +|+|++|+.+|++++++ .|++ ...+.++|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 57899999999999985 5677654 5677888887 99999999999999987 4444 45788999
Q ss_pred HHHHHcCCchHHHHhhh
Q 020094 285 KFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 285 ~~L~~lG~~eEa~~~~~ 301 (331)
.+|+.+|+++||...++
T Consensus 390 ~~~~~qg~~~eA~~~~~ 406 (433)
T 3qww_A 390 RLYMGLENKAAGEKALK 406 (433)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHH
Confidence 99999999999998777
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.90 E-value=5e-05 Score=85.24 Aligned_cols=63 Identities=14% Similarity=0.074 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAP 274 (331)
Q Consensus 205 ~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP 274 (331)
+++.+|++||.++.. .|++++|+..|.+| +|+..+...+.++.. .|++++|+++|..|.+..+
T Consensus 1103 n~p~vWsqLAKAql~-~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL~mArk~~~ 1165 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQ-KGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYLQMARKKAR 1165 (1630)
T ss_pred CCHHHHHHHHHHHHh-CCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhcc
Confidence 567777777777443 77777777777665 666666666666666 7777777777777666653
No 218
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.89 E-value=0.00011 Score=73.45 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=103.3
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
.-.+|+.++...++.+.|...|++| ...+....++..+|.+.+...++++.|..+|+++++..|+++..|..|+.+...
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~ 366 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR 366 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 3567888988888999999999999 444446778888888776655689999999999999999999999899988777
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 255 AHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 255 ~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.|+.++|...|+++ +....+|..+..+....|+.+.+.+.++
T Consensus 367 -~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~~~~~r~v~~ 408 (493)
T 2uy1_A 367 -IGDEENARALFKRL----EKTSRMWDSMIEYEFMVGSMELFRELVD 408 (493)
T ss_dssp -HTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 99999999999998 4578899999999999999888877565
No 219
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.89 E-value=4.6e-05 Score=74.69 Aligned_cols=74 Identities=11% Similarity=-0.055 Sum_probs=64.8
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 020094 201 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDC 277 (331)
Q Consensus 201 ~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~ 277 (331)
..+|.++.++..+|..+.. .|++++|+.++++|+.++|+ ..+|..++.++.. .|++++|++.|++|+.++|...
T Consensus 271 ~~~~~~a~~~~alal~~l~-~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~-~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 271 PELNNLSIIYQIKAVSALV-KGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEM-KGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp GGGTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCSHH
T ss_pred ccCCcCHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCcC
Confidence 4579999999999987655 89999999999999999975 6677677777777 9999999999999999999665
No 220
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.77 E-value=5.6e-05 Score=74.57 Aligned_cols=81 Identities=10% Similarity=0.036 Sum_probs=67.9
Q ss_pred HcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHH
Q 020094 220 VRGDFAKAEELCGRAILA-----NPSDG---NILSLYADLIWQAHKDASRAESYFDQAVKS-----APDDC---YVLASY 283 (331)
Q Consensus 220 ~~gd~ekAee~~erALel-----dP~d~---~al~~yA~ll~~~~Gd~deA~~yfekAL~l-----dP~d~---~vl~~L 283 (331)
.+|+|++|+.+|++++++ .|+++ .++.+++.++.. +|++++|+.++++++++ .|+++ ..+.++
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 379999999999999975 46665 456667777777 99999999999999987 34554 578899
Q ss_pred HHHHHHcCCchHHHHhhh
Q 020094 284 AKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 284 A~~L~~lG~~eEa~~~~~ 301 (331)
|.+|+..|++++|...++
T Consensus 378 a~~~~~~g~~~eA~~~~~ 395 (429)
T 3qwp_A 378 GKLQLHQGMFPQAMKNLR 395 (429)
T ss_dssp HHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 999999999999998776
No 221
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.71 E-value=0.00019 Score=71.89 Aligned_cols=92 Identities=11% Similarity=-0.012 Sum_probs=68.2
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHH------------------------------HHHHHHHHcCCHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGN------------------------------YARFLKEVRGDFA 225 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~n------------------------------LA~~L~~~~gd~e 225 (331)
..++|.+|...|++++|+++|+++ +++..|.. +..+ ++..|+++
T Consensus 151 ~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~-Yek~G~~e 224 (449)
T 1b89_A 151 FGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINY-YQDRGYFE 224 (449)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHH-HHHTTCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHH-HHHCCCHH
Confidence 457899999999999999999999 34544433 2223 45589999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Q 020094 226 KAEELCGRAILANPSDGNILSLYADLIWQA-HKDASRAESYFDQAVKSA 273 (331)
Q Consensus 226 kAee~~erALeldP~d~~al~~yA~ll~~~-~Gd~deA~~yfekAL~ld 273 (331)
+|+.++++++.+++....++..++.++-.- -++..++++.|...+.+.
T Consensus 225 Eai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~ 273 (449)
T 1b89_A 225 ELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIP 273 (449)
T ss_dssp HHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHH
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999997776665430 345556666666555553
No 222
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.64 E-value=0.00042 Score=60.29 Aligned_cols=111 Identities=15% Similarity=0.070 Sum_probs=90.7
Q ss_pred chHHHHHhCCCc------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 178 SNNNYSNNNHGS------SSTDAYYEKMIEANPGN--------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (331)
Q Consensus 178 N~A~~y~s~gd~------ekA~e~yerAL~~nP~n--------~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~ 243 (331)
+|.+.+.+.|+- ++-++.|++|+..-|-. ..+|..||.+ .. .+|.++|.+.|+.++.+.-.++.
T Consensus 18 ~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~e-i~D~d~aR~vy~~a~~~hKkFAK 95 (161)
T 4h7y_A 18 SLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KA-IQEPDDARDYFQMARANCKKFAF 95 (161)
T ss_dssp HHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HH-HHCGGGCHHHHHHHHHHCTTBHH
T ss_pred HHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HH-hcCHHHHHHHHHHHHHHhHHHHH
Confidence 466677777777 88899999999987753 4567777766 33 69999999999999999889999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 020094 244 ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGD 292 (331)
Q Consensus 244 al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~ 292 (331)
+|..+|.+-.. +|+..+|.+.+.+|+...|.....+.. |..-.+.|.
T Consensus 96 iwi~~AqFEiR-qgnl~kARkILg~AiG~~~k~~~~le~-a~~nl~~~~ 142 (161)
T 4h7y_A 96 VHISFAQFELS-QGNVKKSKQLLQKAVERGAVPLEMLEI-ALRNLNLQK 142 (161)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCBCHHHHHH-HHHHHHTTC
T ss_pred HHHHHHHHHHH-cccHHHHHHHHHHHhccCCCcHHHHHH-HHHhhhcCC
Confidence 99999999998 999999999999999999988876543 333444443
No 223
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.43 E-value=0.00065 Score=59.10 Aligned_cols=99 Identities=21% Similarity=0.159 Sum_probs=82.8
Q ss_pred HHhCCCCHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHH
Q 020094 200 IEANPGNALLLGNYARFLKEVRGDF------AKAEELCGRAILANPS--------DGNILSLYADLIWQAHKDASRAESY 265 (331)
Q Consensus 200 L~~nP~n~~~l~nLA~~L~~~~gd~------ekAee~~erALeldP~--------d~~al~~yA~ll~~~~Gd~deA~~y 265 (331)
|-..|+|++.|..|...+.. .|+. ++-...|+||+..-|- ..+.|..||.+ .. .+|.++|...
T Consensus 6 ~~~~p~~yd~W~~yl~llE~-~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~e-i~D~d~aR~v 82 (161)
T 4h7y_A 6 IMMMANNPEDWLSLLLKLEK-NSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KA-IQEPDDARDY 82 (161)
T ss_dssp ----CCSHHHHHHHHHHHHH-HTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HH-HHCGGGCHHH
T ss_pred eeeCCCCHHHHHHHHHHHHH-cCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HH-hcCHHHHHHH
Confidence 45689999999999999766 5888 8999999999998775 55777778765 34 7999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 266 FDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 266 fekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
|+.++.+...-+-+|..+|.|..+.|+...|.+.+.
T Consensus 83 y~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg 118 (161)
T 4h7y_A 83 FQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQ 118 (161)
T ss_dssp HHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 999999977779999999999999999999977654
No 224
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.33 E-value=0.0012 Score=58.01 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=50.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------------------
Q 020094 221 RGDFAKAEELCGRAILANPSDGN---------ILSLYADLIWQAHKDASRAESYFDQAVKS------------------- 272 (331)
Q Consensus 221 ~gd~ekAee~~erALeldP~d~~---------al~~yA~ll~~~~Gd~deA~~yfekAL~l------------------- 272 (331)
.+.|+.|+.....++.+..++++ ++..+|..++. .++|.+|+.+|++||++
T Consensus 33 ~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss 111 (167)
T 3ffl_A 33 AGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAS 111 (167)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC---------------
T ss_pred hhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCC
Confidence 45555555555554444333332 44445555555 55555555555555443
Q ss_pred ------CCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 273 ------APDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 273 ------dP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.+.+.++.+.++.||.+++++++|...++
T Consensus 112 ~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 112 TPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp -----CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 12345789999999999999999998887
No 225
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.19 E-value=0.0064 Score=52.10 Aligned_cols=80 Identities=15% Similarity=0.005 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 204 PGNALLLGNYARFLKEVR--GDFAKAEELCGRAILANP-SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVL 280 (331)
Q Consensus 204 P~n~~~l~nLA~~L~~~~--gd~ekAee~~erALeldP-~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl 280 (331)
.-.+...++||+.|.... .+..+++.+++..+..+| ..-++++.+|..++. .|+|++|+.|.+..++.+|+|..+.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 568899999999987622 235789999999999999 567888888888998 9999999999999999999998765
Q ss_pred HHHH
Q 020094 281 ASYA 284 (331)
Q Consensus 281 ~~LA 284 (331)
.-..
T Consensus 115 ~Lk~ 118 (144)
T 1y8m_A 115 ALKS 118 (144)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 226
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.14 E-value=0.0086 Score=59.92 Aligned_cols=113 Identities=17% Similarity=0.036 Sum_probs=91.9
Q ss_pred CCcHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHH
Q 020094 187 HGSSSTDAYYEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPS-DGNILSLYADLIWQAHKDASRAES 264 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~-n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~-d~~al~~yA~ll~~~~Gd~deA~~ 264 (331)
+..++|.++|+++....-. |...+..+...+.. .|++++|+++|++..+..-. |...|..+...+.. .|+.++|..
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~-~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~-~g~~~~A~~ 161 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVA-KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR-KGDADKAYE 161 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH-CCCHHHHHH
Confidence 4568999999999886422 56667777777665 89999999999999876422 66777677777777 999999999
Q ss_pred HHHHHHHhCC-CCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 265 YFDQAVKSAP-DDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 265 yfekAL~ldP-~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+|++..+..- -|..+|..+..+|.+.|+.++|...++
T Consensus 162 l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 162 VDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 9999988744 488899999999999999999988776
No 227
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.99 E-value=0.0029 Score=53.62 Aligned_cols=81 Identities=15% Similarity=-0.016 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 020094 206 NALLLGNYARFLKEVRG--DFAKAEELCGRAILANP-SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLAS 282 (331)
Q Consensus 206 n~~~l~nLA~~L~~~~g--d~ekAee~~erALeldP-~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~ 282 (331)
.+...++||+.|..... +..+++.+++..++.+| ..-++++.+|..++. .|+|++|+.|.+++++.+|+|..+..-
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 67889999988766322 35689999999999999 457888889999998 999999999999999999999887654
Q ss_pred HHHHH
Q 020094 283 YAKFL 287 (331)
Q Consensus 283 LA~~L 287 (331)
...+-
T Consensus 118 k~~Ie 122 (134)
T 3o48_A 118 KSMVE 122 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 228
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.98 E-value=0.0017 Score=54.49 Aligned_cols=71 Identities=7% Similarity=-0.077 Sum_probs=60.3
Q ss_pred cccchHHHHHhCCCc---HHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 020094 175 FSGSNNNYSNNNHGS---SSTDAYYEKMIEAN-P-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILS 246 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~---ekA~e~yerAL~~n-P-~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~ 246 (331)
-..|||-++....+. .+++..++..+..+ | ..-+.++.+|..++. .|+|.+|.++++.+|+.+|+|..+..
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 356888888887655 45999999999887 5 567788889988766 99999999999999999999999984
No 229
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.94 E-value=0.0048 Score=54.12 Aligned_cols=105 Identities=14% Similarity=0.001 Sum_probs=78.1
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---C--------
Q 020094 180 NNYSNNNHGSSSTDAYYEKMIEANPGNAL---------LLGNYARFLKEVRGDFAKAEELCGRAILAN---P-------- 239 (331)
Q Consensus 180 A~~y~s~gd~ekA~e~yerAL~~nP~n~~---------~l~nLA~~L~~~~gd~ekAee~~erALeld---P-------- 239 (331)
.+.+...+.|+.|+-....++....++++ ++..+|.+++. +++|.+|+.+|++||+.. +
T Consensus 27 ik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~s~~~~ 105 (167)
T 3ffl_A 27 VRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTSKVRPS 105 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 34455668999999999998877554444 77889999887 999999999999997542 1
Q ss_pred --------------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 240 --------------SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFL 287 (331)
Q Consensus 240 --------------~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L 287 (331)
.+.++.+..+.++.. .+++++|+..++.. -..-..+.+-..||..|
T Consensus 106 ~~~~ss~p~s~~~~~e~Elkykia~C~~~-l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 106 TGNSASTPQSQCLPSEIEVKYKLAECYTV-LKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp -----------CCCCHHHHHHHHHHHHHH-TTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred ccccCCCcccccccchHHHHHHHHHHHHH-HCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 123677778887777 99999999987543 11225677777777665
No 230
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.78 E-value=0.031 Score=55.86 Aligned_cols=124 Identities=7% Similarity=-0.023 Sum_probs=94.4
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHH--------HcCCHHHHHHHHHHHHHhCCC-CHHHHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANP-GNALLLGNYARFLKE--------VRGDFAKAEELCGRAILANPS-DGNILSL 247 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP-~n~~~l~nLA~~L~~--------~~gd~ekAee~~erALeldP~-d~~al~~ 247 (331)
+.-+.|.+.|+.++|+++|+++.+..- -|...++.+-.++.. ..+++++|.++|++..+..-. |..+|..
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~ 110 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTN 110 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 344667788999999999999998742 244455444444322 012378999999998876432 6777777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 248 YADLIWQAHKDASRAESYFDQAVKSAP-DDCYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekAL~ldP-~d~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
+...+.. .|++++|+.+|++..+..- -|..+|..+...|.+.|+.++|.+.+++
T Consensus 111 lI~~~~~-~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 111 GARLAVA-KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHh-cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 7777777 9999999999999888632 4888999999999999999999988873
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.0052 Score=65.18 Aligned_cols=115 Identities=11% Similarity=0.133 Sum_probs=82.2
Q ss_pred HHHhCCC-cHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCH---------
Q 020094 182 YSNNNHG-SSSTDAYYEKMIEANPGNALLLGN-YARFLKEVRGDFAKAEELCGRAILA--------NPSDG--------- 242 (331)
Q Consensus 182 ~y~s~gd-~ekA~e~yerAL~~nP~n~~~l~n-LA~~L~~~~gd~ekAee~~erALel--------dP~d~--------- 242 (331)
+....+. ++.|+.++++....+|.....+.. +..++.....+--+|++.+.++++. .+.+.
T Consensus 257 ~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 336 (754)
T 4gns_B 257 FIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCM 336 (754)
T ss_dssp HHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred HHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcc
Confidence 3333445 488999999999999977544322 1122111123456688888887742 33332
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHH
Q 020094 243 -NILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEE 297 (331)
Q Consensus 243 -~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~ 297 (331)
..+..=+.++.. .++++-|+++.++|+...|.+...|+.|+.+|..+|+++.|-
T Consensus 337 ~~LL~~Qa~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~AL 391 (754)
T 4gns_B 337 SDLLNIQTNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKAL 391 (754)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHH
Confidence 233333556666 899999999999999999999999999999999999999985
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.56 E-value=0.013 Score=50.20 Aligned_cols=71 Identities=4% Similarity=-0.115 Sum_probs=60.5
Q ss_pred cccchHHHHHhCCC---cHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 020094 175 FSGSNNNYSNNNHG---SSSTDAYYEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILS 246 (331)
Q Consensus 175 ~~~N~A~~y~s~gd---~ekA~e~yerAL~~nP~-n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~ 246 (331)
-..|||-++....+ ..+++..++..+..+|. .-+.++.+|..++. .++|.+|.++++.+++.+|+|..+..
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 45688888888764 47899999999999995 56677888877665 99999999999999999999999983
No 233
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.51 E-value=0.011 Score=50.01 Aligned_cols=70 Identities=4% Similarity=-0.103 Sum_probs=60.1
Q ss_pred ccchHHHHHhCCC---cHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 020094 176 SGSNNNYSNNNHG---SSSTDAYYEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILS 246 (331)
Q Consensus 176 ~~N~A~~y~s~gd---~ekA~e~yerAL~~nP~-n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~ 246 (331)
..|||-++....+ ..+++..++..++.+|. .-+.++.+|..++. .|+|.+|.++++.+++.+|+|..+..
T Consensus 43 ~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 43 RFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 4688888877754 46899999999999995 47788888888666 99999999999999999999999984
No 234
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.30 E-value=0.05 Score=51.08 Aligned_cols=68 Identities=22% Similarity=0.185 Sum_probs=59.4
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADL 251 (331)
Q Consensus 183 y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~l 251 (331)
+.+.+..+.|++..+..++.+|.|+.....|-.+|+. .|++++|.+.++-+.+++|.....-.+|-.+
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 4456889999999999999999999999999999987 9999999999999999999877665444433
No 235
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.81 E-value=0.046 Score=55.23 Aligned_cols=67 Identities=19% Similarity=0.099 Sum_probs=31.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 221 RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLW 288 (331)
Q Consensus 221 ~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~ 288 (331)
...+..|..||.+|+.++|+++..++.+|.+... .++.-+|+-||.|++......+.+..|+..++.
T Consensus 165 ~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 165 RNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp TTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 3344444444444444444444444444444444 444444444444444443344444444444443
No 236
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.70 E-value=0.26 Score=49.73 Aligned_cols=43 Identities=21% Similarity=0.129 Sum_probs=31.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020094 221 RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQA 269 (331)
Q Consensus 221 ~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekA 269 (331)
.++++.|.++++ ..++...|..+|..+.. .++++.|+.+|.++
T Consensus 665 ~~~~~~A~~~~~-----~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 665 VGQLTLARDLLT-----DESAEMKWRALGDASLQ-RFNFKLAIEAFTNA 707 (814)
T ss_dssp HTCHHHHHHHHT-----TCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-----hhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHc
Confidence 466666666543 34677888888887777 88888888888875
No 237
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.68 E-value=0.097 Score=52.84 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=66.2
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
..++++.......+..|..+|.+|+.++|++...++.+|.+... .++.-+|.-+|-|++....-.+.+..++..++-.
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 45678888888889999999999999999999999999988655 8999999999999998776677777777655543
No 238
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.65 E-value=0.22 Score=50.21 Aligned_cols=87 Identities=9% Similarity=-0.080 Sum_probs=54.1
Q ss_pred cchHHHHHhCCCcHHHHHHH----------------HHHHH--hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH----
Q 020094 177 GSNNNYSNNNHGSSSTDAYY----------------EKMIE--ANPGNALLLGNYARFLKEVRGDFAKAEELCGRA---- 234 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~y----------------erAL~--~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erA---- 234 (331)
..++.++...+..+.|++.. +.|++ ...+++..|..+|.+... .++++.|+++|.++
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~~~~~~f~~~l~~~~~~~A~~~~~~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~~d~~ 711 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQ-RFNFKLAIEAFTNAHDLE 711 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCCCHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHhCCChHHheecCCCcchheehhhhcCCHHHHHHHHHhhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHccChh
Confidence 45677888888877775432 22222 355788999999988554 99999999999986
Q ss_pred ----HHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 020094 235 ----ILANPSDGNILSLYADLIWQAHKDASRAESY 265 (331)
Q Consensus 235 ----LeldP~d~~al~~yA~ll~~~~Gd~deA~~y 265 (331)
|.....+...+..++..... .|++..|..+
T Consensus 712 ~l~~l~~~~~~~~~~~~~~~~a~~-~~~~~~A~~~ 745 (814)
T 3mkq_A 712 SLFLLHSSFNNKEGLVTLAKDAET-TGKFNLAFNA 745 (814)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHHHHHH-cCchHHHHHH
Confidence 22224455544444433333 4444444433
No 239
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.27 E-value=0.33 Score=46.77 Aligned_cols=85 Identities=8% Similarity=-0.010 Sum_probs=64.5
Q ss_pred CCCcHHHHHHHHHHHHhCCCCH----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 020094 186 NHGSSSTDAYYEKMIEANPGNA----------------------LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGN 243 (331)
Q Consensus 186 ~gd~ekA~e~yerAL~~nP~n~----------------------~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~ 243 (331)
.++.+.|.+.|++|+.+-...+ .++..++.++. ..|++.+|+..+++++..+|-+-.
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~ 206 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEI-ACGRASAVIAELEALTFEHPYREP 206 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHH
Confidence 4677888888988888742210 01122333333 379999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 244 ILSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 244 al~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
++..+..+++. .|+..+|+..|+++-+.
T Consensus 207 ~~~~lm~al~~-~Gr~~~Al~~y~~~r~~ 234 (388)
T 2ff4_A 207 LWTQLITAYYL-SDRQSDALGAYRRVKTT 234 (388)
T ss_dssp HHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 99888888888 99999999999987653
No 240
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.39 Score=46.84 Aligned_cols=98 Identities=10% Similarity=-0.038 Sum_probs=70.5
Q ss_pred ccchHHHHHhCCCcHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHH---HHH
Q 020094 176 SGSNNNYSNNNHGSSSTDAYYEKMIEANPG---NALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNI---LSL 247 (331)
Q Consensus 176 ~~N~A~~y~s~gd~ekA~e~yerAL~~nP~---n~~~l~nLA~~L~~~~gd~ekAee~~erALeld--P~d~~a---l~~ 247 (331)
...+|++|...|++++|.++|.++...-.. -.+++.....+... .+|+..+..++.+|-.+- ..++.. +..
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 456899999999999999999998876432 24455555555443 899999999999996552 223322 223
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 248 YADLIWQAHKDASRAESYFDQAVKSAP 274 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekAL~ldP 274 (331)
+.++++...++|.+|-.+|-.++....
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 444444448999999999999887654
No 241
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.73 E-value=0.29 Score=45.94 Aligned_cols=58 Identities=29% Similarity=0.348 Sum_probs=54.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 020094 221 RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYV 279 (331)
Q Consensus 221 ~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~v 279 (331)
.++++.|++.+...|+.+|.|+.....|..++.. .|++++|.+.++-+.+++|.....
T Consensus 10 ~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 10 EGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp TTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCchhhHH
Confidence 7899999999999999999999999999999998 999999999999999999966543
No 242
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.40 E-value=1.4 Score=39.43 Aligned_cols=88 Identities=10% Similarity=-0.047 Sum_probs=57.2
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--h---------------CCCCHH
Q 020094 181 NYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL--A---------------NPSDGN 243 (331)
Q Consensus 181 ~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe--l---------------dP~d~~ 243 (331)
-.++-.|+|.+++-++. +-+..-..+.-+.++. ..+||.+|+..++..++ + ||.|-.
T Consensus 41 I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~-klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE 114 (242)
T 3kae_A 41 IVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYK-KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE 114 (242)
T ss_dssp HHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH
T ss_pred hhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHH
Confidence 34555667776665542 2233333332333433 48999999999999982 2 355655
Q ss_pred HHHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 244 ILSL-YADLIWQAHKDASRAESYFDQAVKSAPD 275 (331)
Q Consensus 244 al~~-yA~ll~~~~Gd~deA~~yfekAL~ldP~ 275 (331)
...+ +|.++.+ .|+.+||+.+|...+..+|-
T Consensus 115 fFy~l~a~lltq-~g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 115 FFESLLGDLCTL-SGYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHH-hcCHHHhhhHhhhhcCCccc
Confidence 5544 4555555 99999999999999999883
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.46 E-value=1.3 Score=42.59 Aligned_cols=54 Identities=7% Similarity=-0.063 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 247 LYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 247 ~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.++..+.. .|++++|+..++++++.+|.+..++..+..+|...|+..+|...++
T Consensus 176 ~~~~~~l~-~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~ 229 (388)
T 2ff4_A 176 AKAEAEIA-CGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYR 229 (388)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34555555 8999999999999999999999999999999999999999987665
No 244
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.91 E-value=0.73 Score=45.11 Aligned_cols=95 Identities=14% Similarity=0.064 Sum_probs=68.6
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHh--CCCCH-H---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHH---HH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEA--NPGNA-L---LLGNYARFLKEVRGDFAKAEELCGRAILAN---PSDGN---IL 245 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~--nP~n~-~---~l~nLA~~L~~~~gd~ekAee~~erALeld---P~d~~---al 245 (331)
.++.+|...++|.+|...+.++++. .-++. . ++..-..++. ..+|+.++..+|.+|.... +-+|. .+
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 7899999999999999999998884 22222 2 2222334544 4899999999999997654 13332 33
Q ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHHHhC
Q 020094 246 SLYADLIWQ-AHKDASRAESYFDQAVKSA 273 (331)
Q Consensus 246 ~~yA~ll~~-~~Gd~deA~~yfekAL~ld 273 (331)
..++++++. ..++|.+|..+|-.++..-
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 356666766 5999999999999998653
No 245
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.40 E-value=0.58 Score=49.61 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 020094 210 LGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAP 274 (331)
Q Consensus 210 l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP 274 (331)
+..-+.+|.. .++|+-|+++.++|+...|.+...|+.++.+|.. +|||+.|+-. |.-.|
T Consensus 340 L~~Qa~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLt----LNScP 398 (754)
T 4gns_B 340 LNIQTNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFA----INSMP 398 (754)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHH----HHHSC
T ss_pred HHHHHHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHH----HhcCC
Confidence 3334566544 8999999999999999999999999999999998 9999999964 44556
No 246
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=90.17 E-value=5.8 Score=35.46 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=81.2
Q ss_pred HHHHHhCCCcHHHHHHHHHHHH-----------------hCCCCHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 020094 180 NNYSNNNHGSSSTDAYYEKMIE-----------------ANPGNALLLGN-YARFLKEVRGDFAKAEELCGRAILANPSD 241 (331)
Q Consensus 180 A~~y~s~gd~ekA~e~yerAL~-----------------~nP~n~~~l~n-LA~~L~~~~gd~ekAee~~erALeldP~d 241 (331)
+-||....+|.+|+.++++.|. .||.+.+++.+ +|.+ ....|+.++|+.+|.+....+|-.
T Consensus 69 ~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~l-ltq~g~r~EaI~y~~~Sf~~~~lf 147 (242)
T 3kae_A 69 SLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDL-CTLSGYREEGIGHYVRSFGKSFLF 147 (242)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHH-HHHhcCHHHhhhHhhhhcCCcccc
Confidence 5688999999999999999993 25677776655 4555 455999999999999999999987
Q ss_pred HHHHHHHHHH----------HHHHcCCHHHHH---------------HHHHHHHHhCCCC-HHHHHHHHHHHHHcCCchH
Q 020094 242 GNILSLYADL----------IWQAHKDASRAE---------------SYFDQAVKSAPDD-CYVLASYAKFLWDAGDDEE 295 (331)
Q Consensus 242 ~~al~~yA~l----------l~~~~Gd~deA~---------------~yfekAL~ldP~d-~~vl~~LA~~L~~lG~~eE 295 (331)
+.+-+.+... +.. .|+-.--+ .+.++....-|.- .++..+++.-|..+|-.++
T Consensus 148 ~~vEnliyeN~vp~~~d~~~i~~-~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iPGiGSY~va~aa~~yf~lg~~d~ 226 (242)
T 3kae_A 148 SPVENLLLENKVPQKRDKENVRQ-TGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVPGIGSYFISNAARRYFNLGMNDK 226 (242)
T ss_dssp HHHHHHHHTTCCCCCC------------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTHHHHHHHHHHHHHHHTTCHHH
T ss_pred chHHHHHhhcCCCcccchHHHHh-hhhccchhhhhhhHHHHHHhccHHHHHHHHHhCCCchhHHHHHHHHHHHhcccchh
Confidence 7776322111 000 01100011 3445555556633 3566788899999999888
Q ss_pred HHHhhh
Q 020094 296 EEQDNE 301 (331)
Q Consensus 296 a~~~~~ 301 (331)
-..+++
T Consensus 227 s~~lf~ 232 (242)
T 3kae_A 227 SKACFE 232 (242)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776665
No 247
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.65 E-value=4.1 Score=39.92 Aligned_cols=95 Identities=8% Similarity=0.111 Sum_probs=66.7
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhC--CCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCHHH---
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEAN--PGN----ALLLGNYARFLKEVRGDFAKAEELCGRAI---LANPSDGNI--- 244 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~n--P~n----~~~l~nLA~~L~~~~gd~ekAee~~erAL---eldP~d~~a--- 244 (331)
.-+|..|...|++.+|...++....-- ..+ .+++..-..++. ..+|+.+|..++.++. ...+.++..
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~ 219 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLE 219 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHH
Confidence 568999999999999999999876431 112 234444445544 4899999999999974 234445432
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 245 LSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 245 l~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
++.+.+.++...++|.+|-.+|..++..
T Consensus 220 ~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 220 YYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 2244455555589999999999999875
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=86.54 E-value=14 Score=32.16 Aligned_cols=46 Identities=9% Similarity=0.033 Sum_probs=35.7
Q ss_pred HHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020094 183 SNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRA 234 (331)
Q Consensus 183 y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erA 234 (331)
....|+++.|.++.+.+ ++...|..+|.... ..|+++=|+++|.++
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHT
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHh
Confidence 34568888888887665 77888999998744 489998888888775
No 249
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=86.17 E-value=7.5 Score=42.93 Aligned_cols=92 Identities=9% Similarity=-0.101 Sum_probs=66.4
Q ss_pred hHHHHHhCCCcHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHH
Q 020094 179 NNNYSNNNHGSSSTDAYYEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNILSLYADL 251 (331)
Q Consensus 179 ~A~~y~s~gd~ekA~e~yerAL~~-----nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeld--P~d~~al~~yA~l 251 (331)
+-+.|.+.|+.++|..+|.++.+. .| |...++.+-..++. .|+.++|.++|++..+.. | |...|..+...
T Consensus 133 LIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~g 209 (1134)
T 3spa_A 133 FFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWAR-QGAFKELVYVLFMVKDAGLTP-DLLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHh-CCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHH
Confidence 445788889999999999776432 34 45556666666565 899999999999888764 4 56666666666
Q ss_pred HHHHcCC-HHHHHHHHHHHHHhCC
Q 020094 252 IWQAHKD-ASRAESYFDQAVKSAP 274 (331)
Q Consensus 252 l~~~~Gd-~deA~~yfekAL~ldP 274 (331)
+.. .|+ .++|..+|++..+..=
T Consensus 210 lcK-~G~~~e~A~~Ll~EM~~kG~ 232 (1134)
T 3spa_A 210 MGR-QDQDAGTIERCLEQMSQEGL 232 (1134)
T ss_dssp HHH-HTCCHHHHHHHHHHHHHHTC
T ss_pred HHh-CCCcHHHHHHHHHHHHHcCC
Confidence 666 676 5788899988888744
No 250
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=85.42 E-value=12 Score=41.26 Aligned_cols=91 Identities=8% Similarity=-0.158 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHH
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAIL-----ANPSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAP-DDCYVL 280 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALe-----ldP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP-~d~~vl 280 (331)
...++.|-..++. .|+.++|.++|.+..+ ..| |...|..+...+.. .|++++|..+|++..+..- -|..+|
T Consensus 127 ~~TynaLIdglcK-~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 127 QQRLLAFFKCCLL-TDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWAR-QGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHh-CCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 3345556667666 8999999999976543 345 67778788888888 9999999999999988643 588899
Q ss_pred HHHHHHHHHcCCc-hHHHHhh
Q 020094 281 ASYAKFLWDAGDD-EEEEQDN 300 (331)
Q Consensus 281 ~~LA~~L~~lG~~-eEa~~~~ 300 (331)
..+..++.+.|+. ++|.+.+
T Consensus 204 ntLI~glcK~G~~~e~A~~Ll 224 (1134)
T 3spa_A 204 AAALQCMGRQDQDAGTIERCL 224 (1134)
T ss_dssp HHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHH
Confidence 9999999999985 5554433
No 251
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.34 E-value=5.2 Score=43.71 Aligned_cols=115 Identities=12% Similarity=-0.104 Sum_probs=78.5
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hC----------------
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL---AN---------------- 238 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe---ld---------------- 238 (331)
.+...+...+.++-+.+ .+..-|.++-..+.+|.++.. .|++++|.++|++|.. .+
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~-~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~ 891 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEK 891 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHH-TTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHT
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHh-cCCHHHHHHHHHHHhhhhcccchhhhhhccccccccc
Confidence 34444555555554443 345567888878888888655 9999999999988731 11
Q ss_pred -C---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHH----HHHHHHHHHHHcCCchHHHH
Q 020094 239 -P---SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAP-DDCY----VLASYAKFLWDAGDDEEEEQ 298 (331)
Q Consensus 239 -P---~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP-~d~~----vl~~LA~~L~~lG~~eEa~~ 298 (331)
+ .-+.+| .....+++..+.++.++++.+.|++..+ ++.. .|.++=....+++++++|-.
T Consensus 892 ~~~~~~l~~YY-~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~ 959 (1139)
T 4fhn_B 892 YHHQNLLSCYY-LHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHV 959 (1139)
T ss_dssp TTSCCSSHHHH-HHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGH
T ss_pred ccccccHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHH
Confidence 0 012233 3334455558999999999999999876 4432 56777788889999999854
No 252
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=84.12 E-value=4.1 Score=35.64 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020094 205 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQA 269 (331)
Q Consensus 205 ~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfekA 269 (331)
.|++..+.+|. ..|+++.|.++++.+ ++...|..++..... +|+++-|+.+|.++
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 46666676653 279999999998765 789999999999998 99999999999865
No 253
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.91 E-value=5.5 Score=43.52 Aligned_cols=115 Identities=9% Similarity=-0.075 Sum_probs=75.1
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHh---C--------------------CCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEA---N--------------------PGNALLLGNYARFLKEVRGDFAKAEELC 231 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~---n--------------------P~n~~~l~nLA~~L~~~~gd~ekAee~~ 231 (331)
..+-+|++|...|++++|..+|+++..- + ...+.++.....+ ++..+-++.++++.
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~L-Fe~~~~~~~vi~fa 922 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKK-LFEESAYIDALEFS 922 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHH-HHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHH-HHHcCCHHHHHHHH
Confidence 3566789999999999999999887321 1 1112333334444 55588999999999
Q ss_pred HHHHHhCC-CCHH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 020094 232 GRAILANP-SDGN----ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGD 292 (331)
Q Consensus 232 erALeldP-~d~~----al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~ 292 (331)
+.||+..+ ++.. .|.++-..... .++|++|...+...=. .......+..+...+...+.
T Consensus 923 ~lAi~~~~~~~~~~~~~l~~~iFk~~L~-l~~ye~Ay~aL~~~pd-~~~r~~cLr~LV~~lce~~~ 986 (1139)
T 4fhn_B 923 LLADASKETDDEDLSIAITHETLKTACA-AGKFDAAHVALMVLST-TPLKKSCLLDFVNQLTKQGK 986 (1139)
T ss_dssp HHHHHHCCSCCHHHHHHHHHHHHHHHHH-HCCSGGGGHHHHHHHH-SSSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHhccCCChhhHHHHHHHHHHHHHh-hCCHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHhCCC
Confidence 99998875 4443 34444444555 8999999877754422 22345556666666665554
No 254
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=76.58 E-value=4.4 Score=30.85 Aligned_cols=13 Identities=23% Similarity=0.051 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHh
Q 020094 225 AKAEELCGRAILA 237 (331)
Q Consensus 225 ekAee~~erALel 237 (331)
++|++++.+|++.
T Consensus 9 ~~Ai~lv~~Ave~ 21 (83)
T 2v6y_A 9 DMARKYAILAVKA 21 (83)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3555555555544
No 255
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=76.40 E-value=4.5 Score=30.95 Aligned_cols=13 Identities=23% Similarity=0.123 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHh
Q 020094 225 AKAEELCGRAILA 237 (331)
Q Consensus 225 ekAee~~erALel 237 (331)
++|++++.+||+.
T Consensus 17 ~~Ai~lv~~Ave~ 29 (83)
T 2w2u_A 17 EMARKYAINAVKA 29 (83)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444455554443
No 256
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.40 E-value=2.8 Score=42.57 Aligned_cols=117 Identities=10% Similarity=-0.020 Sum_probs=48.2
Q ss_pred HHHhCCCcHHHHHHHHHHHH-----------hCCCCHHHHHHHHHHHHHHcCCHHHH--------------HHHHHHHH-
Q 020094 182 YSNNNHGSSSTDAYYEKMIE-----------ANPGNALLLGNYARFLKEVRGDFAKA--------------EELCGRAI- 235 (331)
Q Consensus 182 ~y~s~gd~ekA~e~yerAL~-----------~nP~n~~~l~nLA~~L~~~~gd~ekA--------------ee~~erAL- 235 (331)
++...+++++|.++...++. +|+-++.+|+.|..++ +..++.... ...++.|.
T Consensus 145 ~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~-e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~l 223 (523)
T 4b4t_S 145 FLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSH-ETLARSSEEINSDNQNIILRSTMMKFLKIASL 223 (523)
T ss_dssp -----------------------------------------------------------CHHHHHHHHTHHHHHHHHCCS
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHH-HHhcccccccccccchhhHHHHHHHHHHHHhc
Confidence 45556788888888765551 1444566677666663 335554432 12222222
Q ss_pred HhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCchHHHHhhhh
Q 020094 236 LANPS-DGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD-------CYVLASYAKFLWDAGDDEEEEQDNEE 302 (331)
Q Consensus 236 eldP~-d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d-------~~vl~~LA~~L~~lG~~eEa~~~~~~ 302 (331)
..|+. .+.++..+...|.. .+.++.|..+..++. .|.+ +..++++|.++.-.+++.+|...+..
T Consensus 224 r~D~~~qa~l~nllLRnYL~-~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~ 295 (523)
T 4b4t_S 224 KHDNETKAMLINLILRDFLN-NGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIA 295 (523)
T ss_dssp CSSSCHHHHHHHHHHHHHHH-SSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCcchhHHHHHHHHHHHHc-cCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 22333 34455444444454 899999999999995 4532 56778899999999999999887763
No 257
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.73 E-value=2.1 Score=43.47 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 203 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD-------GNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (331)
Q Consensus 203 nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d-------~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~ 275 (331)
|+.....+.++-.-.|...+.|++|+.+..++. .|.. +.+++.+|.+... +++|.+|.+++..|+...|.
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSC
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCc
Confidence 444444444444333455789999999999995 4432 4445445565665 99999999999999999885
Q ss_pred C
Q 020094 276 D 276 (331)
Q Consensus 276 d 276 (331)
+
T Consensus 303 ~ 303 (523)
T 4b4t_S 303 N 303 (523)
T ss_dssp S
T ss_pred c
Confidence 4
No 258
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.68 E-value=5.7 Score=38.52 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCH----
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD---GNILSLYADLIWQAHKDASRAESYFDQAVKSAP--DDC---- 277 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d---~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP--~d~---- 277 (331)
..++..+|.+++. .||+++|.++|.++....... ..++.....+... .+++..+..++.+|-.+-. .+.
T Consensus 131 ~~~~~~la~~~~~-~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~~~~~~d~~~~~ 208 (429)
T 4b4t_R 131 AQAWINLGEYYAQ-IGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSMIEKGGDWERRN 208 (429)
T ss_dssp SSCCHHHHHHHHH-HCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTCCCTHHHH
T ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhhhcCCCHHHHH
Confidence 4467889999776 999999999999998765432 3445455555666 8999999999999977632 232
Q ss_pred HHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 278 YVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 278 ~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
......|.+++..+++.+|...+-++
T Consensus 209 ~lk~~~gl~~l~~r~f~~Aa~~f~e~ 234 (429)
T 4b4t_R 209 RYKTYYGIHCLAVRNFKEAAKLLVDS 234 (429)
T ss_dssp HHHHHHHHGGGGTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 24455677788889999987766543
No 259
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=74.04 E-value=15 Score=33.35 Aligned_cols=26 Identities=8% Similarity=-0.010 Sum_probs=15.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 247 LYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 247 ~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
+++.++|+..++.++|....++|++.
T Consensus 172 NfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 172 NLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 55556665556666666666655444
No 260
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=73.45 E-value=20 Score=34.85 Aligned_cols=91 Identities=11% Similarity=-0.010 Sum_probs=63.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CC----H
Q 020094 211 GNYARFLKEVRGDFAKAEELCGRAILANP--SDG----NILSLYADLIWQAHKDASRAESYFDQAVKSAP---DD----C 277 (331)
Q Consensus 211 ~nLA~~L~~~~gd~ekAee~~erALeldP--~d~----~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP---~d----~ 277 (331)
..+|.+++. .|+|.+|.+++.++++--. +|. .++..-..++.. .+++.++..+|.+|..... -+ +
T Consensus 103 ~kL~~l~~~-~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~~n~~k~k~~l~~a~~~~~ai~~~p~i~a 180 (394)
T 3txn_A 103 ARLIALYFD-TALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-LSNLPKARAALTSARTTANAIYCPPKVQG 180 (394)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHH-hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhhccCCCCHHHHH
Confidence 378888776 9999999999998886421 222 223223334555 8999999999999976641 23 3
Q ss_pred HHHHHHHHHHH-HcCCchHHHHhhhhh
Q 020094 278 YVLASYAKFLW-DAGDDEEEEQDNEES 303 (331)
Q Consensus 278 ~vl~~LA~~L~-~lG~~eEa~~~~~~~ 303 (331)
.+...-|.++. ..+++.+|...+=|+
T Consensus 181 ~i~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 181 ALDLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHhccCHHHHHHHHHHH
Confidence 45566688888 899999997665533
No 261
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=72.64 E-value=25 Score=31.93 Aligned_cols=50 Identities=10% Similarity=-0.006 Sum_probs=42.0
Q ss_pred CCcHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 187 HGSSSTDAYYEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 187 gd~ekA~e~yerAL~~--------nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
|+.++|..+|+.|+.+ +|-...+..|++.++++..++.++|.++.++|+.
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4468899999999874 4555678889999999999999999999999976
No 262
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=68.24 E-value=17 Score=31.37 Aligned_cols=82 Identities=20% Similarity=0.121 Sum_probs=57.5
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 020094 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYF 266 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yf 266 (331)
++...-..+|-+ .+-.+..+-..|- ++-. +|..++-.+.+...+..++-+|.++..+|..|-. .|+..+|.+++
T Consensus 75 ~NlKrVi~C~~~---~n~~se~vd~ALd-~lv~-~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~a~eLl 148 (172)
T 1wy6_A 75 QNLKSVVECGVI---NNTLNEHVNKALD-ILVI-QGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERDATTLL 148 (172)
T ss_dssp SCTHHHHHHHHH---TTCCCHHHHHHHH-HHHH-TTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hcHHHHHHHHHH---hcchHHHHHHHHH-HHHH-hccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhhHHHHH
Confidence 456677777743 3444333322222 3233 8889999999998888777789999888888887 99999999999
Q ss_pred HHHHHhCC
Q 020094 267 DQAVKSAP 274 (331)
Q Consensus 267 ekAL~ldP 274 (331)
.+|.+..-
T Consensus 149 ~~AC~kG~ 156 (172)
T 1wy6_A 149 IEACKKGE 156 (172)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhh
Confidence 99988643
No 263
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=68.12 E-value=45 Score=34.19 Aligned_cols=112 Identities=9% Similarity=0.051 Sum_probs=72.0
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 020094 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEV---RGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAES 264 (331)
Q Consensus 188 d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~---~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~ 264 (331)
+-+.|...|.+......-+......+...+... .+...++..++.++..... +..+.--++...+. .++++.|..
T Consensus 229 d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~r~Alr-~~d~~~a~~ 306 (618)
T 1qsa_A 229 DAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQ-STSLIERRVRMALG-TGDRRGLNT 306 (618)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCC-CHHHHHHHHHHHHH-HTCHHHHHH
T ss_pred CHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCC-ChHHHHHHHHHHHH-CCCHHHHHH
Confidence 556777777766554444444333222222211 2225677788887665444 44334345555555 799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 265 YFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 265 yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+|++.-..........|=+|.++..+|+.+++...++
T Consensus 307 ~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~ 343 (618)
T 1qsa_A 307 WLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILH 343 (618)
T ss_dssp HHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9987655434567778889999999999999988776
No 264
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=67.17 E-value=28 Score=28.09 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNIL 245 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al 245 (331)
.++|+.++.+|++. +-..+|..++.. |.+|+++|.++++..+.+....
T Consensus 15 l~kAi~lv~~Ave~-----D~ag~y~eAl~l----Y~~Aie~l~~alk~e~~~~~~k 62 (117)
T 2cpt_A 15 LQKAIDLASKAAQE-----DKAGNYEEALQL----YQHAVQYFLHVVKYEAQGDKAK 62 (117)
T ss_dssp HHHHHHHHHHHHHH-----HHHTCHHHHHHH----HHHHHHHHHHHHHTSCCCHHHH
T ss_pred HHHHHHHHHHHHHH-----HHccCHHHHHHH----HHHHHHHHHHHHHhccCCHHHH
Confidence 47888888888753 222334444334 5566666666666665666543
No 265
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=66.49 E-value=9.9 Score=29.47 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=22.2
Q ss_pred CcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 188 GSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 188 d~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
-.++|+.++.+|++ ....++|++|+.+|..||+
T Consensus 11 ~l~~Ai~lv~~Ave----------------~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 11 DSTAAVAVLKRAVE----------------LDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHH----------------HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------------HHHhCCHHHHHHHHHHHHH
Confidence 34677777777644 3457788887777777665
No 266
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=66.42 E-value=8.9 Score=29.41 Aligned_cols=15 Identities=13% Similarity=0.158 Sum_probs=7.7
Q ss_pred cCCHHHHHHHHHHHH
Q 020094 221 RGDFAKAEELCGRAI 235 (331)
Q Consensus 221 ~gd~ekAee~~erAL 235 (331)
.|+|++|+.+|..||
T Consensus 29 ~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 29 ESRYPQALVCYQEGI 43 (86)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555555555444
No 267
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=65.94 E-value=8.8 Score=31.19 Aligned_cols=14 Identities=29% Similarity=0.359 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHh
Q 020094 224 FAKAEELCGRAILA 237 (331)
Q Consensus 224 ~ekAee~~erALel 237 (331)
+.+|+.++.+||+.
T Consensus 15 l~kAi~lv~~Ave~ 28 (117)
T 2cpt_A 15 LQKAIDLASKAAQE 28 (117)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45777777777654
No 268
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=65.59 E-value=7.6 Score=35.38 Aligned_cols=35 Identities=14% Similarity=0.137 Sum_probs=17.9
Q ss_pred hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 237 ANPSDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 271 (331)
Q Consensus 237 ldP~d~~al---~~yA~ll~~~~Gd~deA~~yfekAL~ 271 (331)
+.|.+|.-+ .+++.++|+..++.++|....++|+.
T Consensus 164 L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 164 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455555321 24555555555566655555555544
No 269
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=65.22 E-value=35 Score=29.35 Aligned_cols=112 Identities=10% Similarity=0.028 Sum_probs=73.4
Q ss_pred hCCCcHHHHHHHHHHHHhCC--------------CCHHHH----HHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 020094 185 NNHGSSSTDAYYEKMIEANP--------------GNALLL----GNYARFLK-EVRGDFAKAEELCGRAILANPSDGNIL 245 (331)
Q Consensus 185 s~gd~ekA~e~yerAL~~nP--------------~n~~~l----~nLA~~L~-~~~gd~ekAee~~erALeldP~d~~al 245 (331)
..|..++..+...+...-.| -+.+++ -..|.++. ...+++..-+.+|-+. +-+.-++=
T Consensus 19 ldG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~---n~~se~vd 95 (172)
T 1wy6_A 19 LDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVIN---NTLNEHVN 95 (172)
T ss_dssp HTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHT---TCCCHHHH
T ss_pred HhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHh---cchHHHHH
Confidence 34666777777777666544 222322 23333311 1357888888888653 44444443
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 246 SLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 246 ~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+|.-+.-.+|+.++-.+.+...+...+-++.++..+|.+|.+.|+..++...+.
T Consensus 96 --~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~ 149 (172)
T 1wy6_A 96 --KALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLI 149 (172)
T ss_dssp --HHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred --HHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHH
Confidence 443333338999999999888777777789999999999999999999986655
No 270
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=64.98 E-value=61 Score=28.79 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=65.7
Q ss_pred cHHHHHHHHHHHHh---CCCCHH-HHHHHHHHHHHH--cCCH--H-HHH-HHHHHHHHhC------CCCHHHH---HHHH
Q 020094 189 SSSTDAYYEKMIEA---NPGNAL-LLGNYARFLKEV--RGDF--A-KAE-ELCGRAILAN------PSDGNIL---SLYA 249 (331)
Q Consensus 189 ~ekA~e~yerAL~~---nP~n~~-~l~nLA~~L~~~--~gd~--e-kAe-e~~erALeld------P~d~~al---~~yA 249 (331)
.+.....|++.|.. ..+||. .|..|-.-.... .|.- + .-. .++++++..- -+|+..+ ..|+
T Consensus 8 l~~~r~~fE~~l~~~l~~~dDPL~~w~~YIkW~ee~yP~g~~~~~s~L~~~lLErc~~~F~~~~rYkND~RYLklWl~Ya 87 (202)
T 3esl_A 8 LNQTKIAYEQRLLNDLEDMDDPLDLFLDYMIWISTSYIEVDSESGQEVLRSTMERCLIYIQDMETYRNDPRFLKIWIWYI 87 (202)
T ss_dssp HHHHHHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHhCCCCCCcchhchHHHHHHHHHHHhcccccccCCHHHHHHHHHHH
Confidence 45666777777776 566765 455554221111 1221 1 122 4667776542 2355444 3333
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 250 DLIWQAHKDASRAESYFDQAVKSAP--DDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 250 ~ll~~~~Gd~deA~~yfekAL~ldP--~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
..+. .+...++...|.......= ..+..|..+|.++...|++.+|+..++
T Consensus 88 ~~~~--~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~ 139 (202)
T 3esl_A 88 NLFL--SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLE 139 (202)
T ss_dssp HHHS--TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred Hhhc--ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3221 2336688888887777654 778888899999999999999987665
No 271
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=62.98 E-value=13 Score=27.98 Aligned_cols=18 Identities=6% Similarity=0.034 Sum_probs=11.7
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 020094 219 EVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 219 ~~~gd~ekAee~~erALe 236 (331)
...|+|++|+.+|..|++
T Consensus 24 D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 346777777776666665
No 272
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.48 E-value=34 Score=25.80 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 020094 190 SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSD 241 (331)
Q Consensus 190 ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d 241 (331)
++|+.+.++|++.|- ..+|..++.. |.+|+++|.++++..|+.
T Consensus 9 ~~Ai~lv~~Ave~D~-----~g~y~eAl~l----Y~~aie~l~~~lk~e~d~ 51 (83)
T 2v6y_A 9 DMARKYAILAVKADK-----EGKVEDAITY----YKKAIEVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHH----HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHH-----hccHHHHHHH----HHHHHHHHHHHHHHCCCH
Confidence 578888888866421 1222223233 445555555555555543
No 273
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=62.17 E-value=9.4 Score=35.36 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=17.1
Q ss_pred hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHH
Q 020094 237 ANPSDGNIL---SLYADLIWQAHKDASRAESYFDQAV 270 (331)
Q Consensus 237 ldP~d~~al---~~yA~ll~~~~Gd~deA~~yfekAL 270 (331)
+.|.+|.-+ .+++.++|+..++.++|....++|+
T Consensus 169 L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 455555321 2455555555555555555555444
No 274
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=62.01 E-value=34 Score=26.32 Aligned_cols=15 Identities=20% Similarity=0.124 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHhC
Q 020094 224 FAKAEELCGRAILAN 238 (331)
Q Consensus 224 ~ekAee~~erALeld 238 (331)
.++|+.++.+|++.|
T Consensus 12 l~~Ai~lv~~Ave~D 26 (93)
T 1wfd_A 12 STAAVAVLKRAVELD 26 (93)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 345666666665553
No 275
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=61.26 E-value=10 Score=34.69 Aligned_cols=22 Identities=9% Similarity=0.157 Sum_probs=9.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHH
Q 020094 248 YADLIWQAHKDASRAESYFDQA 269 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekA 269 (331)
++.++|+..++.++|....++|
T Consensus 181 fSVFyyEiln~~~~Ac~lAk~A 202 (236)
T 3iqu_A 181 FSVFHYEIANSPEEAISLAKTT 202 (236)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 4444444444444444444443
No 276
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=60.71 E-value=34 Score=25.94 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=21.8
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS 240 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~ 240 (331)
.++|+.+..+|++.|- ..+|..++.. |.+|+++|.++++..|+
T Consensus 16 ~~~Ai~lv~~Ave~D~-----~g~y~eAl~l----Y~~aie~l~~alk~e~d 58 (83)
T 2w2u_A 16 EEMARKYAINAVKADK-----EGNAEEAITN----YKKAIEVLAQLVSLYRD 58 (83)
T ss_dssp HHHHHHHHHHHHHHHH-----TTCHHHHHHH----HHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHH-----hccHHHHHHH----HHHHHHHHHHHHHHCCC
Confidence 3677888888766421 1222223222 44455555555555553
No 277
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=60.12 E-value=11 Score=34.72 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 224 FAKAEELCGRAILANPSDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 271 (331)
Q Consensus 224 ~ekAee~~erALeldP~d~~al---~~yA~ll~~~~Gd~deA~~yfekAL~ 271 (331)
|++|.++... .+.|.+|.-+ .+++.++|+..++.++|....++|++
T Consensus 154 Y~~A~~iA~~--~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 154 YSEAHEISKE--HMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHH--HSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh--hCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4444444332 4556655322 24555666655666666555555443
No 278
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=59.89 E-value=11 Score=34.99 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 224 FAKAEELCGRAILANPSDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 271 (331)
Q Consensus 224 ~ekAee~~erALeldP~d~~al---~~yA~ll~~~~Gd~deA~~yfekAL~ 271 (331)
|++|.++... .+.|.+|.-+ .+++.++|+..++.++|....++|++
T Consensus 179 Y~~A~~iA~~--~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 179 YKAASDIAMT--ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHH--HSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh--hCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4444444332 4556665322 24555566655666666555555544
No 279
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=58.89 E-value=12 Score=34.75 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=18.7
Q ss_pred hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 237 ANPSDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 271 (331)
Q Consensus 237 ldP~d~~al---~~yA~ll~~~~Gd~deA~~yfekAL~ 271 (331)
+.|.+|.-+ .+++.++|+..++.++|....++|++
T Consensus 189 L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 189 LEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455555321 24555566555666666655555554
No 280
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=58.65 E-value=1.3e+02 Score=29.14 Aligned_cols=93 Identities=15% Similarity=0.081 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-hC-CCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCH--
Q 020094 209 LLGNYARFLKEVRGDFAKAEELCGRAIL-AN-PSDG----NILSLYADLIWQAHKDASRAESYFDQAVK---SAPDDC-- 277 (331)
Q Consensus 209 ~l~nLA~~L~~~~gd~ekAee~~erALe-ld-P~d~----~al~~yA~ll~~~~Gd~deA~~yfekAL~---ldP~d~-- 277 (331)
+...||.++.. .|++.+|..++..... .. ..+. .++..-..+++. .+++.+|..+++++.. ..+.++
T Consensus 139 l~~~La~i~e~-~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~-~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 139 VTKDLVEIKKE-EGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL-KGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 34567888665 9999999999988753 21 1222 344444555666 8999999999999742 233333
Q ss_pred --HHHHHHHHHHHHcCCchHHHHhhhhh
Q 020094 278 --YVLASYAKFLWDAGDDEEEEQDNEES 303 (331)
Q Consensus 278 --~vl~~LA~~L~~lG~~eEa~~~~~~~ 303 (331)
.++...+.++...+++.+|-..+.|.
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~ 244 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEI 244 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 45667788888888998887655543
No 281
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=58.51 E-value=53 Score=29.20 Aligned_cols=80 Identities=9% Similarity=0.044 Sum_probs=57.2
Q ss_pred HHHHHHHHhC---------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcCCHHHH
Q 020094 194 AYYEKMIEAN---------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP--SDGNILSLYADLIWQAHKDASRA 262 (331)
Q Consensus 194 e~yerAL~~n---------P~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP--~d~~al~~yA~ll~~~~Gd~deA 262 (331)
.++++++... |--..+|..||.++ ...+...+..+|.-+....- .-+..|..+|.++.. .|++.+|
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~--~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A 134 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF--LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN-AQFFLEA 134 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh--cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHH
Confidence 4667776642 22344566777663 13447788888888776654 577777778887777 9999999
Q ss_pred HHHHHHHHHhCCCC
Q 020094 263 ESYFDQAVKSAPDD 276 (331)
Q Consensus 263 ~~yfekAL~ldP~d 276 (331)
...|+++++....-
T Consensus 135 ~~Vy~~GI~~~A~P 148 (202)
T 3esl_A 135 KVLLELGAENNCRP 148 (202)
T ss_dssp HHHHHHHHHTTCBS
T ss_pred HHHHHHHHHcCCcc
Confidence 99999999987633
No 282
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=57.63 E-value=48 Score=25.21 Aligned_cols=42 Identities=10% Similarity=0.189 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 190 SSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS 240 (331)
Q Consensus 190 ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~ 240 (331)
.+|+.+..+|++.+ -..+|..++.. |.+|+++|..++...|+
T Consensus 14 ~~A~~lv~~Ave~D-----~~g~y~eAl~l----Y~~Aie~ll~alk~e~d 55 (86)
T 4a5x_A 14 TAAATVLKRAVELD-----SESRYPQALVC----YQEGIDLLLQVLKGTKD 55 (86)
T ss_dssp HHHHHHHHHHHHHH-----HTTCHHHHHHH----HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHH-----HcCCHHHHHHH----HHHHHHHHHHHHhhCCC
Confidence 45666666666652 22334444444 66777777777766654
No 283
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=56.30 E-value=25 Score=32.06 Aligned_cols=47 Identities=21% Similarity=0.309 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 190 ekA~e~yerAL~-----~nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
++|..+|++|+. +.|.+|. +..|++.|+++..++.++|.++.++|+.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 667777777765 3456654 3456777777777888888887777665
No 284
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=56.04 E-value=46 Score=34.11 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=53.6
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYFDQ 268 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yfek 268 (331)
..++...+.+...... +....--++.... ..+|+..|.+++.++-......+...+=++..+.. .|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQ-STSLIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCC-ChHHHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 5677777777665444 3333444444323 36999999999987655434456555446666665 8999999999998
Q ss_pred HHH
Q 020094 269 AVK 271 (331)
Q Consensus 269 AL~ 271 (331)
+..
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 865
No 285
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=55.06 E-value=26 Score=32.40 Aligned_cols=47 Identities=17% Similarity=0.219 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHh----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 190 SSTDAYYEKMIEA----NPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 190 ekA~e~yerAL~~----nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
++|..+|++|+.+ .|.+|. +..|++.|+++..++.++|+++.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455555555542 344432 2345555555555556666555555554
No 286
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=54.41 E-value=27 Score=32.04 Aligned_cols=47 Identities=26% Similarity=0.335 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 190 SSTDAYYEKMIE-----ANPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 190 ekA~e~yerAL~-----~nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
++|..+|++|+. +.|.+|. +..|++.|+++..++.++|.++.++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 678889998876 3567765 4568888989889999999999988776
No 287
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=52.43 E-value=20 Score=33.36 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 224 FAKAEELCGRAILANPSDGNIL---SLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 224 ~ekAee~~erALeldP~d~~al---~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
|++|.++...-+++.|.+|.-+ .+++.++|+..++.++|....++|++.
T Consensus 175 Yq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 175 YEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 6666666655443367776432 256677777677888888877777765
No 288
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=52.42 E-value=30 Score=31.93 Aligned_cols=47 Identities=23% Similarity=0.268 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 190 SSTDAYYEKMIEA-----NPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 190 ekA~e~yerAL~~-----nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
++|..+|++|+.+ .|.+|. +..|++.|+++..++.++|+++.++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 6888999998864 677765 4578889999989999999999999874
No 289
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=52.00 E-value=34 Score=31.05 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 190 SSTDAYYEKMIEA-----NPGNAL---LLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 190 ekA~e~yerAL~~-----nP~n~~---~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
++|..+|++|+.+ .|.+|. +..|++.|+++..++.++|.++.++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5666677776643 455554 3456667777767777777777777665
No 290
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=50.43 E-value=34 Score=31.66 Aligned_cols=26 Identities=23% Similarity=0.188 Sum_probs=13.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 211 GNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 211 ~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
.|++.++++..++.++|.++.++|+.
T Consensus 202 LNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 202 LNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445555545555555555555443
No 291
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=49.87 E-value=36 Score=29.69 Aligned_cols=85 Identities=12% Similarity=-0.066 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 020094 208 LLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILS----LYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASY 283 (331)
Q Consensus 208 ~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~----~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~L 283 (331)
.+.+.+|.+... +++|.+|.+++..|+...|.+..-.. .|....-..+|++.. ...+++ .+.. .+..+
T Consensus 15 ~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~~--~y~~L 86 (203)
T 3t5x_A 15 TYKYYVGRKAMF-DSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHLM--QFAEV 86 (203)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTCG--GGHHH
T ss_pred HHHHHHHHHHHH-HhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cchh--HHHHH
Confidence 345666777544 89999999999999999887643221 232223344788654 333432 1211 35566
Q ss_pred HHHHHHcCCchHHHHhhh
Q 020094 284 AKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 284 A~~L~~lG~~eEa~~~~~ 301 (331)
..+ .+.|+...-++.++
T Consensus 87 ~~A-vr~Gdl~~f~~~l~ 103 (203)
T 3t5x_A 87 TRA-VSEGNLLLLHEALA 103 (203)
T ss_dssp HHH-HHHTCHHHHHHHHH
T ss_pred HHH-HHhCCHHHHHHHHH
Confidence 554 45677666655544
No 292
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=46.64 E-value=2.1e+02 Score=30.49 Aligned_cols=95 Identities=12% Similarity=-0.146 Sum_probs=53.9
Q ss_pred hHHHHHhCCCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCC------------------
Q 020094 179 NNNYSNNNHGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL-ANP------------------ 239 (331)
Q Consensus 179 ~A~~y~s~gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe-ldP------------------ 239 (331)
+...+...+.++-|. +.+.--|.++-.-+.+|.++.. .|++++|.++|++|-. +..
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~-~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHH-TTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 334444455544332 3445567777777777877544 8888888888887642 111
Q ss_pred --CCHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHH
Q 020094 240 --SDGNI-LSLYADLIWQAHKDASRAESYFDQAVKSAP-DDCY 278 (331)
Q Consensus 240 --~d~~a-l~~yA~ll~~~~Gd~deA~~yfekAL~ldP-~d~~ 278 (331)
+...+ |+.-..-+++..+-++-++...+.||+... +|..
T Consensus 891 e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred cccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 11110 222333344447777777777777776543 4443
No 293
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=46.10 E-value=74 Score=23.66 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPS 240 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~ 240 (331)
.++|..+..+|+..+- ..+|..++.. |.+|+++|..+++..|+
T Consensus 10 l~~A~~l~~~Av~~D~-----~g~y~eAl~~----Y~~aie~l~~a~k~e~~ 52 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDT-----ATQYEEAYTA----YYNGLDYLMLALKYEKN 52 (85)
T ss_dssp HHHHHHHHHHHHHHHH-----TTCHHHHHHH----HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHH-----cCCHHHHHHH----HHHHHHHHHHHHHhCCC
Confidence 4788888888876532 2344455455 77888888888887764
No 294
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=45.49 E-value=1.1e+02 Score=28.58 Aligned_cols=66 Identities=8% Similarity=-0.084 Sum_probs=45.1
Q ss_pred CCCcccccchHHHHHhCCCcHHHHHHHHHHH----------------H---hCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 020094 170 GGGSGFSGSNNNYSNNNHGSSSTDAYYEKMI----------------E---ANPGNALLLGNYARFLKEVRGDFAKAEEL 230 (331)
Q Consensus 170 ~g~~~~~~N~A~~y~s~gd~ekA~e~yerAL----------------~---~nP~n~~~l~nLA~~L~~~~gd~ekAee~ 230 (331)
.|++.++.-+|..|.+.+++.+|+.+|-..- . -.|...+++..-|.+.+...++...|...
T Consensus 131 ~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~ 210 (312)
T 2wpv_A 131 FGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHES 210 (312)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3578899999999999999999999873110 1 23344555555555555567888777777
Q ss_pred HHHHH
Q 020094 231 CGRAI 235 (331)
Q Consensus 231 ~erAL 235 (331)
+..-+
T Consensus 211 ~~~f~ 215 (312)
T 2wpv_A 211 KDIFL 215 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 295
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=45.22 E-value=54 Score=32.27 Aligned_cols=64 Identities=17% Similarity=0.117 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 207 ALLLGNYARFLKEVRG--DFAKAEELCGRAILAN-----PSDGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~g--d~ekAee~~erALeld-----P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
|.++.+||.+- +..- ....++.+|.+||... ....+-+-.+++.+|+ .+++.+|+.++-.|-..
T Consensus 255 PmALgnLgDLE-e~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 255 PMAIANLGDLE-EISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHH-HHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred chhhcchhhHH-hcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHHH
Confidence 44555555542 2121 1223889999998762 2333444357788888 99999999988776544
No 296
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=43.09 E-value=2.1e+02 Score=26.69 Aligned_cols=110 Identities=10% Similarity=-0.001 Sum_probs=62.2
Q ss_pred CCcHHHHHHHHHHHHh----CC-CC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHH
Q 020094 187 HGSSSTDAYYEKMIEA----NP-GN-ALLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPSDGNILSLYADLIWQA 255 (331)
Q Consensus 187 gd~ekA~e~yerAL~~----nP-~n-~~~l~nLA~~L~~~~gd~ekAee~~erALel-----dP~d~~al~~yA~ll~~~ 255 (331)
|+|-+|.+.|+....+ .. +. .++++.-|..+.. .+++..|..+..-.|+. .|-+......+..++-.
T Consensus 27 G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~-~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~- 104 (312)
T 2wpv_A 27 GDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLK-AKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAE- 104 (312)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTT-
T ss_pred cChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-CCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-
Confidence 5666666666554443 22 11 2234444555444 78877776654444433 23344444444443322
Q ss_pred cCCHH-HHHHHHHHHHHhC------C-CCHHHHHHHHHHHHHcCCchHHHH
Q 020094 256 HKDAS-RAESYFDQAVKSA------P-DDCYVLASYAKFLWDAGDDEEEEQ 298 (331)
Q Consensus 256 ~Gd~d-eA~~yfekAL~ld------P-~d~~vl~~LA~~L~~lG~~eEa~~ 298 (331)
...-+ .=.+++++|++.. + -+++.+..+|..||+.+++.+|+.
T Consensus 105 ~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~ 155 (312)
T 2wpv_A 105 LDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAER 155 (312)
T ss_dssp CCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHH
Confidence 22111 2245666666552 2 588999999999999999988875
No 297
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=42.68 E-value=1.2e+02 Score=30.33 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=51.5
Q ss_pred ccchHHHHHhC--CCcHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCH
Q 020094 176 SGSNNNYSNNN--HGSSSTDAYYEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDG 242 (331)
Q Consensus 176 ~~N~A~~y~s~--gd~ekA~e~yerAL~~-----nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel------dP~d~ 242 (331)
.+|+|++-.-. .....++++|++||.. +.....-+..+|.++++ .++|.+|.+++-.|-.. .-+|-
T Consensus 265 LgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~Vi~~YnY~reDe 343 (489)
T 4gq4_A 265 LGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATVIQDYNYCREDE 343 (489)
T ss_dssp HHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSCCCTTCH
T ss_pred hhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhhhhhhcccccchH
Confidence 56777766554 3445688899999884 34455566667888777 89999999999888654 23466
Q ss_pred HHHHHHHHH
Q 020094 243 NILSLYADL 251 (331)
Q Consensus 243 ~al~~yA~l 251 (331)
.++..+..+
T Consensus 344 EiYke~~eI 352 (489)
T 4gq4_A 344 EIYKEFFEV 352 (489)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666444443
No 298
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=42.16 E-value=1.3e+02 Score=29.62 Aligned_cols=61 Identities=7% Similarity=0.074 Sum_probs=45.9
Q ss_pred ccchHHHHHhC--CCcHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 176 SGSNNNYSNNN--HGSSSTDAYYEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 237 (331)
Q Consensus 176 ~~N~A~~y~s~--gd~ekA~e~yerAL~~-----nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel 237 (331)
.+|+|++=.-. .+...++.+|.++|.. +..+..-+..+|.++++ .+++.+|++++-.|-..
T Consensus 258 LgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 258 IANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHHH
Confidence 56777765544 3455689999999885 44566667778888777 99999999999888654
No 299
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=41.41 E-value=79 Score=26.72 Aligned_cols=50 Identities=4% Similarity=0.062 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 020094 227 AEELCGRAILAN--PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDC 277 (331)
Q Consensus 227 Aee~~erALeld--P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~ 277 (331)
+..+|.-+.... -.-+..|..+|.++.. .|++.+|...|+++++....-.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~A~P~ 135 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEA-QGELQHASAVLQRGIQNQAEPR 135 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCBSH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCccH
Confidence 666666665544 4677777788887777 9999999999999999876443
No 300
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=40.52 E-value=26 Score=32.62 Aligned_cols=24 Identities=29% Similarity=0.409 Sum_probs=10.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Q 020094 212 NYARFLKEVRGDFAKAEELCGRAI 235 (331)
Q Consensus 212 nLA~~L~~~~gd~ekAee~~erAL 235 (331)
|++.++++..++.++|+++.++|+
T Consensus 201 NfSVFyYEIln~p~~Ac~lAk~AF 224 (268)
T 3efz_A 201 NYTILKYDLLGNPEGAMKFANRAI 224 (268)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 333444443444444444444433
No 301
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=40.43 E-value=1.5e+02 Score=29.54 Aligned_cols=76 Identities=12% Similarity=0.116 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Q 020094 206 NALLLGNYARFLKEVRGD--FAKAEELCGRAILA-----NPSDGNILSLYADLIWQAHKDASRAESYFDQAVKS------ 272 (331)
Q Consensus 206 n~~~l~nLA~~L~~~~gd--~ekAee~~erALel-----dP~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l------ 272 (331)
-|.++.+||.+-.. .-. ...++++|++||.. +....+-+..+|+.+++ .+++.+|+.++-.|-+.
T Consensus 261 YPmALgnLgDLEei-~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~Vi~~YnY 338 (489)
T 4gq4_A 261 YPMALGNLADLEEL-EPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATVIQDYNY 338 (489)
T ss_dssp CHHHHHHHHHHHHH-SCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSCC
T ss_pred cchhhhcccCHhhc-CCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhhhhhhccc
Confidence 47777778777322 222 34488899999975 23344444346888888 99999999999887554
Q ss_pred CCCCHHHHHHH
Q 020094 273 APDDCYVLASY 283 (331)
Q Consensus 273 dP~d~~vl~~L 283 (331)
+-+|.++|-.+
T Consensus 339 ~reDeEiYke~ 349 (489)
T 4gq4_A 339 CREDEEIYKEF 349 (489)
T ss_dssp CTTCHHHHHHH
T ss_pred ccchHHHHHHH
Confidence 33555555433
No 302
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=39.01 E-value=72 Score=28.74 Aligned_cols=50 Identities=10% Similarity=0.092 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 020094 226 KAEELCGRAILAN--PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 276 (331)
Q Consensus 226 kAee~~erALeld--P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d 276 (331)
.+..+|.-+.... -.-+..|..+|.++.. .|++.+|...|+++++..-.-
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~A~P 183 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKADEVYQKGKRMKAKP 183 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCBS
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCcc
Confidence 4556666666544 4677778788887777 999999999999999987643
No 303
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=36.90 E-value=76 Score=27.13 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 020094 207 ALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PSDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 275 (331)
Q Consensus 207 ~~~l~nLA~~L~~~~gd~ekAee~~erALeld--P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~ 275 (331)
..+|..||.+ ..+ +..+|.-+.... -.-+..|..+|.++-. .|++.+|...|+++++....
T Consensus 66 LklWl~ya~~----~~~---p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 66 LNLWLKLGRL----CNE---PLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp HHHHHHHHHH----CSC---HHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHh----cCC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCC
Confidence 3345555544 344 555666665544 4677777778887777 99999999999999998753
No 304
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=36.62 E-value=1.9e+02 Score=24.61 Aligned_cols=56 Identities=13% Similarity=0.119 Sum_probs=39.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHH--HHHHcCCHHHHHHHHHHHHHh
Q 020094 215 RFLKEVRGDFAKAEELCGRAILANPSD------GNILSL-YADL--IWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 215 ~~L~~~~gd~ekAee~~erALeldP~d------~~al~~-yA~l--l~~~~Gd~deA~~yfekAL~l 272 (331)
..++. .|+|=+|.+.++.+-...+.. ...+.. +|.. .+. .|+..-|...+.+|+..
T Consensus 40 i~lFn-~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~-rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 40 VRLYN-SGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFD-FEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHH-TTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHH
T ss_pred HHHHh-CCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 34444 699999999999998877655 222222 3333 344 79999999999999884
No 305
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=36.07 E-value=36 Score=26.31 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=24.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 020094 211 GNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIW 253 (331)
Q Consensus 211 ~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~ 253 (331)
...+..+....+++.+++.-..++++.+|.||.++..|--.+-
T Consensus 13 d~v~~~f~~ga~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~ 55 (85)
T 2ca5_A 13 SSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLS 55 (85)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 3334333333345666777777788889999988876655443
No 306
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=35.82 E-value=87 Score=31.35 Aligned_cols=46 Identities=9% Similarity=0.043 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 226 KAEELCGRAILAN-----PSDGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 226 kAee~~erALeld-----P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
.++.+|.+||... ....+-+-.+++.+|+ .+++.+|+.++-.|-..
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATV 347 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHHH
Confidence 3788899988752 2334444357788888 99999999988776554
No 307
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=35.39 E-value=90 Score=30.85 Aligned_cols=66 Identities=8% Similarity=-0.048 Sum_probs=50.0
Q ss_pred cccchHHHHHhCCCcHHHHHHHHHHHHhCC--C--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 020094 175 FSGSNNNYSNNNHGSSSTDAYYEKMIEANP--G--------NALLLGNYARFLKEVRGDFAKAEELCGRAILA-NPSD 241 (331)
Q Consensus 175 ~~~N~A~~y~s~gd~ekA~e~yerAL~~nP--~--------n~~~l~nLA~~L~~~~gd~ekAee~~erALel-dP~d 241 (331)
+..++-..|++.++..-+...++.+-...+ . -..+.+.+|.+.. .+.+|.+|.+++..|+.. .|.+
T Consensus 178 l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 178 LVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYL-LNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHH-HHccHHHHHHHHHHHHHhcCCcc
Confidence 355677899999999999999976544433 1 1334566677754 499999999999999998 7765
No 308
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=35.35 E-value=1.1e+02 Score=25.96 Aligned_cols=59 Identities=10% Similarity=-0.083 Sum_probs=42.8
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCCCC---HHHH---HH-HHHHH-HHHcCCHHHHHHHHHHHHH
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANPGN---ALLL---GN-YARFL-KEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP~n---~~~l---~n-LA~~L-~~~~gd~ekAee~~erALe 236 (331)
-.+..+++.++|=+|-++++.+-...+.. ..++ .+ +|..+ ....|+..-|..++++|+.
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34556777799999999999999887655 2333 33 33222 2347999999999999987
No 309
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=35.21 E-value=2.5e+02 Score=25.18 Aligned_cols=109 Identities=13% Similarity=0.110 Sum_probs=68.2
Q ss_pred cHHHHHHHHHHHHh--CCCCHH-HHHHHHHHHHHHc--CC-H-HHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHH
Q 020094 189 SSSTDAYYEKMIEA--NPGNAL-LLGNYARFLKEVR--GD-F-AKAEELCGRAILANP------SDGNILSLYADLIWQA 255 (331)
Q Consensus 189 ~ekA~e~yerAL~~--nP~n~~-~l~nLA~~L~~~~--gd-~-ekAee~~erALeldP------~d~~al~~yA~ll~~~ 255 (331)
.++....|++.|.. ..+||. .|..|-.-..... |. . ..-..++++++..-- +|+.++ ..++.|.
T Consensus 51 l~~~r~~fE~~i~~~~~~dDPL~~w~~YIkW~ee~yP~g~~~~s~L~~lLErc~~~F~~~~rYknD~RyL--klWl~Ya- 127 (223)
T 4aez_C 51 LQKERMGHERKIETSESLDDPLQVWIDYIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYL--RIWMQYV- 127 (223)
T ss_dssp HHHHHHHHHHHHHHGGGSSCTHHHHHHHHHHHHHHCTTCCCTTTCHHHHHHHHHHHTTTCGGGTTCHHHH--HHHHHHH-
T ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhCcCCCcchhhHHHHHHHHHHHhcccccccCCHHHH--HHHHHHH-
Confidence 56677788888875 445554 5666653322211 21 1 113456666665532 455554 2233333
Q ss_pred cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 256 HKDASRAESYFDQAVKSAP--DDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 256 ~Gd~deA~~yfekAL~ldP--~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
...+.+..+|..+....= ..+..|..+|.+|...|++.+|+..++
T Consensus 128 -~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~ 174 (223)
T 4aez_C 128 -NYIDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQ 174 (223)
T ss_dssp -TTCSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -HccCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 233577778877776644 778899999999999999999987665
No 310
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=34.91 E-value=3e+02 Score=26.07 Aligned_cols=121 Identities=9% Similarity=-0.001 Sum_probs=77.2
Q ss_pred CCCcccccchHHHHHhCCCcHHHHHHHHH-------HH---------HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020094 170 GGGSGFSGSNNNYSNNNHGSSSTDAYYEK-------MI---------EANPGNALLLGNYARFLKEVRGDFAKAEELCGR 233 (331)
Q Consensus 170 ~g~~~~~~N~A~~y~s~gd~ekA~e~yer-------AL---------~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~er 233 (331)
.|++.+..-+|..|.+.+++.+|+.+|-. .+ ...|...+++..-|.+.+...++...|...+..
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRI 212 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35778888889999999999888887620 11 113556666666676767778898888776544
Q ss_pred HH----HhCC------------------CCHHHHHHHHHHHHHH--cCC---HHHHHHHHHHHHHhCC-CCHHHHHHHHH
Q 020094 234 AI----LANP------------------SDGNILSLYADLIWQA--HKD---ASRAESYFDQAVKSAP-DDCYVLASYAK 285 (331)
Q Consensus 234 AL----eldP------------------~d~~al~~yA~ll~~~--~Gd---~deA~~yfekAL~ldP-~d~~vl~~LA~ 285 (331)
-+ +.+| ..|. + ++..++... .+. |..-...|+..++.+| .-...+..+|.
T Consensus 213 f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PL-L-NFl~lLllt~q~~~~~lF~~L~~~Y~~~l~rd~~~~~~~L~~IG~ 290 (336)
T 3lpz_A 213 FTSALVEDNKGLTVQNIGSQSAELRIFPSLPL-L-NFISMLLLSVQKGSPDLFRQLKSKYEANLNELNGIWDTALELIAE 290 (336)
T ss_dssp HHHHHHHHCTTSCCEESCC--CCCEECTTCHH-H-HHHHHHHHHHHSCCHHHHHHHHHHTHHHHHTTTTTTHHHHHHHHH
T ss_pred HHHHHhhcCCCccccccccCCcccccCCCCch-H-HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Confidence 43 2333 2332 2 333332221 443 4455567777788887 66788888999
Q ss_pred HHHHcCC
Q 020094 286 FLWDAGD 292 (331)
Q Consensus 286 ~L~~lG~ 292 (331)
.|.....
T Consensus 291 ~YFgi~~ 297 (336)
T 3lpz_A 291 MYFGIQR 297 (336)
T ss_dssp HHHCCCC
T ss_pred HHcCCCC
Confidence 9986643
No 311
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=34.12 E-value=1.4e+02 Score=29.88 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=52.2
Q ss_pred ccchHHHHHhC--CCcHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCH
Q 020094 176 SGSNNNYSNNN--HGSSSTDAYYEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPSDG 242 (331)
Q Consensus 176 ~~N~A~~y~s~--gd~ekA~e~yerAL~~-----nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALel------dP~d~ 242 (331)
.+|+|++=... .....++.+|.++|.. +..+..-+..+|.++++ .+++.+|+.++-.|-.. .-+|-
T Consensus 280 LgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~Vi~~YNY~reDe 358 (550)
T 3u84_A 280 LGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATVIQDYNYCREDE 358 (550)
T ss_dssp HHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSCCCGGGH
T ss_pred hcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHHHHHHcCCCcchH
Confidence 56777665443 3445788899998885 45566667778888787 99999999999887654 23466
Q ss_pred HHHHHHHHH
Q 020094 243 NILSLYADL 251 (331)
Q Consensus 243 ~al~~yA~l 251 (331)
.+|..+..+
T Consensus 359 EIYKEf~eI 367 (550)
T 3u84_A 359 EIYKEFFEV 367 (550)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666554443
No 312
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=33.90 E-value=67 Score=33.01 Aligned_cols=47 Identities=15% Similarity=0.050 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCch
Q 020094 247 LYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDAGDDE 294 (331)
Q Consensus 247 ~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~lG~~e 294 (331)
..|...+. .|+|.-|.+....++..+|+|..+..-++.+|.++|...
T Consensus 454 ~~a~~~~~-~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 454 EQARASYA-RGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 45566666 899999999999999999999999999999999888543
No 313
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=33.90 E-value=2.1e+02 Score=24.02 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCchHHHHhhh
Q 020094 260 SRAESYFDQAVKSAP--DDCYVLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 260 deA~~yfekAL~ldP--~d~~vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
+++...|..+....= ..+..|..+|.++...|++.+|+..++
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~ 125 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQ 125 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 447777776665543 677888888999999999999987765
No 314
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=31.29 E-value=1.1e+02 Score=30.26 Aligned_cols=87 Identities=8% Similarity=-0.013 Sum_probs=52.1
Q ss_pred CcHHHHHHHHHHHHh-----CCC--C-----HHHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------CC
Q 020094 188 GSSSTDAYYEKMIEA-----NPG--N-----ALLL----GNYARFLKEVRGDFAKAEELCGRAILANP----------SD 241 (331)
Q Consensus 188 d~ekA~e~yerAL~~-----nP~--n-----~~~l----~nLA~~L~~~~gd~ekAee~~erALeldP----------~d 241 (331)
..+++-..+.++... +|+ . .... .++-.+++. .++..-+...++..-...+ +-
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFk-l~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFR-IESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHH-SSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHH-cCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 347777778887776 111 1 1112 222344444 7877777666644322222 12
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 020094 242 GNILSLYADLIWQAHKDASRAESYFDQAVKS-APDD 276 (331)
Q Consensus 242 ~~al~~yA~ll~~~~Gd~deA~~yfekAL~l-dP~d 276 (331)
..+++.+|.++.. +++|.+|.+++..|+.. +|.+
T Consensus 220 v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLL-NSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHH-HccHHHHHHHHHHHHHhcCCcc
Confidence 3444445555555 99999999999999999 8865
No 315
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=30.87 E-value=1.1e+02 Score=22.66 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=11.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHH
Q 020094 221 RGDFAKAEELCGRAILANPSDGNI 244 (331)
Q Consensus 221 ~gd~ekAee~~erALeldP~d~~a 244 (331)
.|++++|..+|-+||...|+-...
T Consensus 30 ~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 30 QGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp TTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHH
Confidence 444555555555555555544433
No 316
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.35 E-value=1.3e+02 Score=28.51 Aligned_cols=53 Identities=21% Similarity=0.146 Sum_probs=31.4
Q ss_pred HHcCCHHHHHHHHHHHHHhC---------------CCCH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 219 EVRGDFAKAEELCGRAILAN---------------PSDG--NILSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 219 ~~~gd~ekAee~~erALeld---------------P~d~--~al~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
....|.++|.+++.+....- -..+ .+....+..+.. .++.++|..+++++-..
T Consensus 87 ~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~-~~d~~~a~~~l~~~~~~ 156 (393)
T 4b4t_O 87 KDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLL-KNDLVKARDLLDDLEKT 156 (393)
T ss_dssp HHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHh
Confidence 33567888888877653210 0122 333344445555 78888888888877643
No 317
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=29.62 E-value=3.7e+02 Score=25.45 Aligned_cols=61 Identities=10% Similarity=0.001 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHH-------HH--------Hh-CCCCHH-HHHHHHHHHHHcCCchHHHHhhh
Q 020094 240 SDGNILSLYADLIWQAHKDASRAESYFDQ-------AV--------KS-APDDCY-VLASYAKFLWDAGDDEEEEQDNE 301 (331)
Q Consensus 240 ~d~~al~~yA~ll~~~~Gd~deA~~yfek-------AL--------~l-dP~d~~-vl~~LA~~L~~lG~~eEa~~~~~ 301 (331)
.|+..+..+|..+|. .+++.+|+.+|-. .+ +. .|.... ........|..+++...|.+.+.
T Consensus 134 Gdp~LH~~ig~~~~~-e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~ 211 (336)
T 3lpz_A 134 GDPELHHVVGTLYVE-EGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYR 211 (336)
T ss_dssp CCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHc-cCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 588888889999998 8999999988731 11 00 222222 23344445667888888876443
No 318
>2l6f_A Focal adhesion kinase 1, linker1, paxillin, linke paxillin; FAT, FAK, LD2, LD4, fusion protein, chimera protei transferase,cell adhesion; NMR {Gallus gallus} PDB: 2l6g_A 2l6h_A
Probab=35.55 E-value=11 Score=33.83 Aligned_cols=6 Identities=17% Similarity=0.407 Sum_probs=2.8
Q ss_pred hhhhhh
Q 020094 105 RIQRLF 110 (331)
Q Consensus 105 ~~~~~~ 110 (331)
|++..+
T Consensus 129 Ri~~~~ 134 (215)
T 2l6f_A 129 RLKMIS 134 (215)
Confidence 444444
No 319
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=28.66 E-value=1e+02 Score=31.58 Aligned_cols=42 Identities=29% Similarity=0.351 Sum_probs=34.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 020094 214 ARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHK 257 (331)
Q Consensus 214 A~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~G 257 (331)
|...+. .|+|.-|.+++..++..+|+|..+...++..+.+ +|
T Consensus 456 a~~~~~-~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~-l~ 497 (658)
T 2cfu_A 456 ARASYA-RGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ-LG 497 (658)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HH
T ss_pred HHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HH
Confidence 444344 7999999999999999999999999888887766 44
No 320
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.57 E-value=3.5e+02 Score=25.52 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=54.3
Q ss_pred HHhCCCcHHHHHHHHHHHHhC---------------CCCHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------C
Q 020094 183 SNNNHGSSSTDAYYEKMIEAN---------------PGNAL--LLGNYARFLKEVRGDFAKAEELCGRAILA-------N 238 (331)
Q Consensus 183 y~s~gd~ekA~e~yerAL~~n---------------P~n~~--~l~nLA~~L~~~~gd~ekAee~~erALel-------d 238 (331)
.....+.++|.++++++...- -..+. +...++.++. ..++..+|..+++++-.. +
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl-~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYL-LKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 344567788888887663321 11223 3344555543 489999999999988643 2
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020094 239 PSDGNILSLYADLIWQAHKDASRAESYFDQAVKS 272 (331)
Q Consensus 239 P~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~l 272 (331)
|..-..++.....+++..++++.+..++-.++..
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 2222223334455566688998888877777763
No 321
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=28.55 E-value=1.2e+02 Score=26.15 Aligned_cols=31 Identities=6% Similarity=-0.050 Sum_probs=26.5
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHHhCCCCH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIEANPGNA 207 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~~nP~n~ 207 (331)
+=+++++...++|.+|.+++.+|++.-|...
T Consensus 18 YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 18 YYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 4467888999999999999999999977653
No 322
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=28.23 E-value=88 Score=24.69 Aligned_cols=21 Identities=24% Similarity=0.112 Sum_probs=10.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHH
Q 020094 248 YADLIWQAHKDASRAESYFDQA 269 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekA 269 (331)
.+..+.. .|+|++|+.+.++|
T Consensus 21 rAe~ll~-~gkydeAIech~kA 41 (97)
T 2crb_A 21 RADRLLA-AGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHh-cCCHHHHHHHHHHH
Confidence 3344444 55555555444443
No 323
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=27.98 E-value=1.9e+02 Score=21.50 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 020094 248 YADLIWQAHKDASRAESYFDQAVKSAPDDCYVLAS 282 (331)
Q Consensus 248 yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~ 282 (331)
+|..+.. .|++++|..+|-+|+...|.-...+.-
T Consensus 23 ~GE~L~~-~g~~~~~~~hf~nAl~Vc~qP~~LL~i 56 (73)
T 3ax2_A 23 LGEELLA-QGDYEKGVDHLTNAIAVCGQPQQLLQV 56 (73)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 6676666 888899999899999998866555433
No 324
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=27.01 E-value=2e+02 Score=21.84 Aligned_cols=28 Identities=11% Similarity=0.156 Sum_probs=15.3
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARF 216 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~ 216 (331)
++.|+.|.+++-...-++++.+...-.+
T Consensus 10 ~~~A~~YvnkVK~rF~~~p~~Y~~FL~I 37 (89)
T 1g1e_B 10 FNHAINYVNKIKNRFQGQPDIYKAFLEI 37 (89)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHH
Confidence 4556666666666555555554443333
No 325
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=26.25 E-value=44 Score=25.27 Aligned_cols=25 Identities=12% Similarity=0.052 Sum_probs=17.0
Q ss_pred cchHHHHHhCCCcHHHHHHHHHHHH
Q 020094 177 GSNNNYSNNNHGSSSTDAYYEKMIE 201 (331)
Q Consensus 177 ~N~A~~y~s~gd~ekA~e~yerAL~ 201 (331)
..+|+-|...|+|+.|+.||+.+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3456666667777777777777665
No 326
>4ah2_B HLA class II histocompatibility antigen gamma CHA class II histocompatibility antigen\,DRB1-1...; MHC II, immune system, SELF antigen; 2.36A {Homo sapiens}
Probab=25.81 E-value=20 Score=32.02 Aligned_cols=16 Identities=44% Similarity=0.835 Sum_probs=2.7
Q ss_pred eeeeeecCCCCCCCCC
Q 020094 141 VQTMVMGGGLGNNGGK 156 (331)
Q Consensus 141 ~~~~~~GGG~gg~gg~ 156 (331)
++|+-|||||.||||.
T Consensus 11 ~~~~~~~~~~~~~~~~ 26 (229)
T 4ah2_B 11 MQALPMGGGGSGGGGS 26 (229)
T ss_dssp CCCC------------
T ss_pred HhhcccCCCcCCCCCC
Confidence 5677788887665553
No 327
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=23.39 E-value=74 Score=24.94 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 223 DFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 223 d~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
++..++.-...+++.+|+||.++..|-..+
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~l 60 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIM 60 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345555555566677888887776554443
No 328
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=22.98 E-value=99 Score=27.67 Aligned_cols=37 Identities=24% Similarity=0.161 Sum_probs=17.5
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 020094 216 FLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLI 252 (331)
Q Consensus 216 ~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll 252 (331)
+.+...|.+++|++.++|.+..++.+......|+.++
T Consensus 125 ~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~II 161 (211)
T 3bqo_A 125 AVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMII 161 (211)
T ss_dssp HHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 3344466666777666666665555444443443333
No 329
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=21.33 E-value=3.3e+02 Score=22.00 Aligned_cols=73 Identities=16% Similarity=0.061 Sum_probs=42.6
Q ss_pred CCcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 020094 187 HGSSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQAHKDASRAESYF 266 (331)
Q Consensus 187 gd~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~~~Gd~deA~~yf 266 (331)
+.+++|..+ -..+...++ .+....+-..-..++|+|++|..+.+..- .| |-..| ++.+-|+ .|..++++..+
T Consensus 21 H~HqEA~tI-AdwL~~~~~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~p-dlepw--~ALce~r-lGl~s~le~rL 92 (116)
T 2p58_C 21 HYHEEANCI-AEWLHLKGE-EEAVQLIRLSSLMNRGDYASALQQGNKLA--YP-DLEPW--LALCEYR-LGLGSALESRL 92 (116)
T ss_dssp TCHHHHHHH-HHHHHHTTC-HHHHHHHHHHHHHHTTCHHHHHHHHTTSC--CG-GGHHH--HHHHHHH-HTCHHHHHHHH
T ss_pred hHHHHHHHH-HHHHHhCCc-HHHHHHHHHHHHHcchhHHHHHHhcCCCC--Cc-hHHHH--HHHHHHh-cccHHHHHHHH
Confidence 444555443 344566666 55554444333345788888887765443 22 23333 5666777 88888877766
Q ss_pred H
Q 020094 267 D 267 (331)
Q Consensus 267 e 267 (331)
.
T Consensus 93 ~ 93 (116)
T 2p58_C 93 N 93 (116)
T ss_dssp H
T ss_pred H
Confidence 3
No 330
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=20.51 E-value=3.9e+02 Score=22.59 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 020094 192 TDAYYEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPSDGNI 244 (331)
Q Consensus 192 A~e~yerAL~~n--P~n~~~l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~a 244 (331)
+.++|+.+.... -..+.++..+|.++.. .|++.+|.+.|++.|+.+..-..-
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~A~~Iy~~Gi~~~A~P~~~ 132 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRKADAIFQEGIQQKAEPLER 132 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCcHHH
Confidence 444444444432 2345566666766544 777777777777777766443433
No 331
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=20.51 E-value=2.9e+02 Score=25.04 Aligned_cols=66 Identities=12% Similarity=0.117 Sum_probs=46.6
Q ss_pred cHHHHHHHHHHHHhCCCCHHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 020094 189 SSSTDAYYEKMIEANPGNALL-------LGNYARFLKEVRGDFAKAEELCGRAILANPSDGNILSLYADLIWQ 254 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~-------l~nLA~~L~~~~gd~ekAee~~erALeldP~d~~al~~yA~ll~~ 254 (331)
.+.|+..++.+-.-.+-+... +---|.+.+...|.|++|++.+++.+..+|.+......|+.++..
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 478888888877766543322 112244455668999999999999999888777777677766665
No 332
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.08 E-value=1.4e+02 Score=24.34 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020094 189 SSSTDAYYEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 236 (331)
Q Consensus 189 ~ekA~e~yerAL~~nP~n~~~l~nLA~~L~~~~gd~ekAee~~erALe 236 (331)
|++|..|..++|. ....|+.+.|+++|++.|.
T Consensus 19 h~~AF~~Is~AL~----------------~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 19 YKKAFLFVNKGLN----------------TDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHH----------------HHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh----------------hhhcCCHHHHHHHHHHHHH
No 333
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=20.01 E-value=5.5e+02 Score=24.14 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=60.6
Q ss_pred chHHHHHhCCCcHHHHHHHHHHHHhCC----CCH----HH------HHHH--HHHHHHHcCCH-----HHHHHHHHHHH-
Q 020094 178 SNNNYSNNNHGSSSTDAYYEKMIEANP----GNA----LL------LGNY--ARFLKEVRGDF-----AKAEELCGRAI- 235 (331)
Q Consensus 178 N~A~~y~s~gd~ekA~e~yerAL~~nP----~n~----~~------l~nL--A~~L~~~~gd~-----ekAee~~erAL- 235 (331)
+-|.-+...|++++|+..|+.+|..-| ++. ++ -..| |..+.....+. +...+.++-|.
T Consensus 107 k~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELAAY 186 (320)
T 3mkr_B 107 QLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAY 186 (320)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHH
Confidence 344556788999999999999998765 221 11 1112 21111111221 12222222222
Q ss_pred ----HhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 020094 236 ----LANP-SDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDCYVLASYAKFLWDA 290 (331)
Q Consensus 236 ----eldP-~d~~al~~yA~ll~~~~Gd~deA~~yfekAL~ldP~d~~vl~~LA~~L~~l 290 (331)
++.| +-.-++...-...|+ .++|.-|..+.++.|++.|. ..+....-.++...
T Consensus 187 FT~c~Lqp~H~~LaLr~AM~~a~K-~KNy~tAa~fArrLLel~p~-~~~~~qArkil~~c 244 (320)
T 3mkr_B 187 FTHSNLQPVHMILVLRTALNLFFK-LKNFRTAAAFARRLLELGPK-PEVAQQTRKILSAC 244 (320)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHHH-TTBHHHHHHHHHHHHHTCCC-HHHHHHHHHHHHHH
T ss_pred hccCCCcHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHH
Confidence 1123 223344333344555 99999999999999999884 55555554444433
Done!