Query 020101
Match_columns 331
No_of_seqs 210 out of 1933
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 11:48:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020101.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020101hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp4_A Succinyl-COA ligase [GD 100.0 2.3E-70 7.8E-75 520.9 32.8 300 26-329 1-304 (305)
2 1oi7_A Succinyl-COA synthetase 100.0 1.6E-70 5.6E-75 518.2 29.8 286 37-324 2-287 (288)
3 2yv2_A Succinyl-COA synthetase 100.0 2.2E-70 7.4E-75 519.4 29.9 290 34-325 6-296 (297)
4 2yv1_A Succinyl-COA ligase [AD 100.0 7.6E-70 2.6E-74 515.0 27.8 288 34-325 6-293 (294)
5 2nu8_A Succinyl-COA ligase [AD 100.0 6.1E-69 2.1E-73 507.5 31.8 286 37-324 2-287 (288)
6 3mwd_B ATP-citrate synthase; A 100.0 3.8E-63 1.3E-67 475.1 27.6 283 37-327 5-318 (334)
7 2csu_A 457AA long hypothetical 100.0 1.3E-61 4.4E-66 483.9 22.2 270 33-322 1-285 (457)
8 3pff_A ATP-citrate synthase; p 100.0 5.6E-59 1.9E-63 488.2 27.7 286 37-327 491-804 (829)
9 3dmy_A Protein FDRA; predicted 100.0 4.7E-46 1.6E-50 371.6 18.4 210 83-325 19-236 (480)
10 1iuk_A Hypothetical protein TT 99.9 1.4E-24 4.9E-29 183.7 5.5 123 34-166 6-132 (140)
11 2duw_A Putative COA-binding pr 99.9 9E-24 3.1E-28 179.7 9.0 124 33-166 5-132 (145)
12 1y81_A Conserved hypothetical 99.9 2.5E-23 8.7E-28 175.6 10.0 119 36-166 10-131 (138)
13 2d59_A Hypothetical protein PH 99.9 1.5E-23 5.1E-28 178.1 8.3 121 34-166 15-139 (144)
14 3ff4_A Uncharacterized protein 99.9 3.3E-23 1.1E-27 171.5 8.2 109 44-164 6-117 (122)
15 3ijp_A DHPR, dihydrodipicolina 99.5 1.5E-13 5.2E-18 128.9 11.0 116 39-159 18-145 (288)
16 4f3y_A DHPR, dihydrodipicolina 99.4 1.2E-12 4.1E-17 122.0 10.6 114 41-159 6-130 (272)
17 3qy9_A DHPR, dihydrodipicolina 99.2 1.3E-11 4.4E-16 113.3 8.2 107 42-159 3-109 (243)
18 1dih_A Dihydrodipicolinate red 99.2 1.9E-11 6.5E-16 113.9 9.3 118 40-162 3-133 (273)
19 3keo_A Redox-sensing transcrip 99.2 6.9E-12 2.4E-16 112.7 5.4 109 23-132 62-181 (212)
20 1p9l_A Dihydrodipicolinate red 99.2 1.4E-10 4.8E-15 106.4 12.0 102 43-159 1-105 (245)
21 4fb5_A Probable oxidoreductase 99.0 7.1E-10 2.4E-14 106.2 10.7 123 34-158 15-153 (393)
22 4ew6_A D-galactose-1-dehydroge 99.0 7E-10 2.4E-14 105.5 10.0 112 41-158 24-140 (330)
23 3o9z_A Lipopolysaccaride biosy 99.0 1.9E-09 6.4E-14 101.8 12.4 115 42-158 3-131 (312)
24 4had_A Probable oxidoreductase 99.0 1.5E-09 5E-14 103.3 9.4 120 36-158 17-145 (350)
25 3evn_A Oxidoreductase, GFO/IDH 99.0 6E-09 2.1E-13 98.6 13.4 115 41-158 4-126 (329)
26 3q2i_A Dehydrogenase; rossmann 99.0 3.4E-09 1.2E-13 101.2 11.6 117 39-158 10-134 (354)
27 3euw_A MYO-inositol dehydrogen 98.9 2.4E-09 8.3E-14 101.8 10.0 115 41-158 3-124 (344)
28 3db2_A Putative NADPH-dependen 98.9 1.6E-09 5.5E-14 103.5 8.6 115 41-158 4-125 (354)
29 3e9m_A Oxidoreductase, GFO/IDH 98.9 5.2E-09 1.8E-13 99.2 12.1 115 41-158 4-126 (330)
30 3oa2_A WBPB; oxidoreductase, s 98.9 6E-09 2.1E-13 98.6 12.5 115 42-158 3-132 (318)
31 3e18_A Oxidoreductase; dehydro 98.9 2.4E-09 8.1E-14 102.8 9.8 115 41-158 4-124 (359)
32 2dt5_A AT-rich DNA-binding pro 98.9 8.5E-10 2.9E-14 99.0 6.2 109 21-132 56-173 (211)
33 1vm6_A DHPR, dihydrodipicolina 98.9 3.5E-09 1.2E-13 95.7 9.7 103 41-162 11-114 (228)
34 3fhl_A Putative oxidoreductase 98.9 2.7E-09 9.3E-14 102.4 9.7 115 41-158 4-124 (362)
35 3rc1_A Sugar 3-ketoreductase; 98.9 2.6E-09 9E-14 102.2 9.3 115 40-157 25-147 (350)
36 3moi_A Probable dehydrogenase; 98.9 2.3E-09 7.7E-14 103.9 8.8 115 41-158 1-123 (387)
37 3kux_A Putative oxidoreductase 98.9 2.6E-09 9E-14 102.0 9.1 116 40-158 5-126 (352)
38 1lc0_A Biliverdin reductase A; 98.9 5.4E-09 1.9E-13 97.8 11.0 114 40-158 5-124 (294)
39 3i23_A Oxidoreductase, GFO/IDH 98.9 2.3E-09 8E-14 102.3 8.4 113 42-158 2-124 (349)
40 4gqa_A NAD binding oxidoreduct 98.9 3.4E-09 1.2E-13 103.3 9.5 119 39-159 23-156 (412)
41 2dc1_A L-aspartate dehydrogena 98.9 4.5E-09 1.6E-13 95.0 9.5 113 43-164 1-116 (236)
42 2vt3_A REX, redox-sensing tran 98.9 1.9E-09 6.5E-14 97.0 6.9 110 21-133 61-179 (215)
43 3ec7_A Putative dehydrogenase; 98.9 3.8E-09 1.3E-13 101.3 9.1 116 40-158 21-147 (357)
44 3e82_A Putative oxidoreductase 98.9 5.3E-09 1.8E-13 100.6 10.0 116 40-158 5-126 (364)
45 4hkt_A Inositol 2-dehydrogenas 98.9 5.7E-09 1.9E-13 98.7 9.7 113 42-158 3-122 (331)
46 1ydw_A AX110P-like protein; st 98.9 8.4E-09 2.9E-13 98.8 10.9 116 40-158 4-130 (362)
47 1zh8_A Oxidoreductase; TM0312, 98.9 5.3E-09 1.8E-13 99.6 9.5 117 39-158 15-141 (340)
48 3c1a_A Putative oxidoreductase 98.9 8E-09 2.7E-13 97.1 10.4 116 40-158 8-128 (315)
49 2p2s_A Putative oxidoreductase 98.9 1.5E-08 5.1E-13 96.0 12.2 113 41-156 3-123 (336)
50 3u3x_A Oxidoreductase; structu 98.9 1.8E-08 6.1E-13 96.8 12.9 115 41-158 25-147 (361)
51 3btv_A Galactose/lactose metab 98.8 1.5E-08 5.1E-13 99.9 11.8 116 40-156 18-152 (438)
52 3mz0_A Inositol 2-dehydrogenas 98.8 5.5E-09 1.9E-13 99.4 7.9 114 42-158 2-126 (344)
53 3cea_A MYO-inositol 2-dehydrog 98.8 1.8E-08 6E-13 95.6 11.3 116 40-158 6-131 (346)
54 3gdo_A Uncharacterized oxidore 98.8 7.4E-09 2.5E-13 99.3 8.1 115 41-158 4-124 (358)
55 3ezy_A Dehydrogenase; structur 98.8 8.9E-09 3E-13 97.9 8.5 113 43-158 3-123 (344)
56 4gmf_A Yersiniabactin biosynth 98.8 6.4E-09 2.2E-13 100.8 7.6 112 40-158 5-127 (372)
57 2glx_A 1,5-anhydro-D-fructose 98.8 1.3E-08 4.5E-13 95.9 9.4 113 43-158 1-121 (332)
58 3uuw_A Putative oxidoreductase 98.8 8.2E-09 2.8E-13 96.6 7.9 111 41-156 5-123 (308)
59 3f4l_A Putative oxidoreductase 98.8 6.5E-09 2.2E-13 99.0 7.2 114 42-158 2-124 (345)
60 1tlt_A Putative oxidoreductase 98.8 2.6E-08 9E-13 93.6 11.2 110 41-154 4-119 (319)
61 3m2t_A Probable dehydrogenase; 98.8 1.2E-08 4.1E-13 97.9 8.7 115 41-158 4-127 (359)
62 3ohs_X Trans-1,2-dihydrobenzen 98.8 1.5E-08 5.3E-13 95.9 9.2 114 42-158 2-125 (334)
63 2ho3_A Oxidoreductase, GFO/IDH 98.8 2.5E-08 8.6E-13 94.0 10.6 112 43-158 2-121 (325)
64 4h3v_A Oxidoreductase domain p 98.8 1.1E-08 3.7E-13 97.7 7.5 116 41-158 5-137 (390)
65 3dty_A Oxidoreductase, GFO/IDH 98.7 3.4E-08 1.2E-12 96.0 10.7 115 41-158 11-144 (398)
66 1h6d_A Precursor form of gluco 98.7 1.2E-08 4.2E-13 100.4 7.6 117 39-158 80-209 (433)
67 3bio_A Oxidoreductase, GFO/IDH 98.7 1.5E-08 5.1E-13 95.4 7.6 113 41-157 8-124 (304)
68 3v5n_A Oxidoreductase; structu 98.7 4.3E-08 1.5E-12 96.0 10.0 116 41-159 36-170 (417)
69 2nvw_A Galactose/lactose metab 98.7 4.8E-08 1.6E-12 97.6 10.5 118 40-158 37-174 (479)
70 2ixa_A Alpha-N-acetylgalactosa 98.7 2.7E-08 9.3E-13 98.1 8.2 117 40-159 18-151 (444)
71 1f06_A MESO-diaminopimelate D- 98.7 2.4E-08 8.1E-13 94.6 7.5 113 41-158 2-118 (320)
72 3oqb_A Oxidoreductase; structu 98.7 1.7E-08 5.9E-13 97.3 6.2 118 40-158 4-142 (383)
73 3ip3_A Oxidoreductase, putativ 98.6 3E-08 1E-12 94.1 6.8 109 42-153 2-120 (337)
74 3upl_A Oxidoreductase; rossman 98.5 8.7E-08 3E-12 94.8 5.4 113 39-154 20-161 (446)
75 2csu_A 457AA long hypothetical 98.5 1.3E-05 4.5E-10 79.5 20.5 251 44-325 151-446 (457)
76 1xea_A Oxidoreductase, GFO/IDH 98.4 5E-07 1.7E-11 85.0 8.3 110 43-156 3-120 (323)
77 3do5_A HOM, homoserine dehydro 98.4 1.9E-06 6.5E-11 82.1 11.6 158 42-211 2-191 (327)
78 3mtj_A Homoserine dehydrogenas 98.3 3.7E-07 1.3E-11 90.4 5.3 162 40-211 8-186 (444)
79 1j5p_A Aspartate dehydrogenase 98.2 3.6E-06 1.2E-10 77.3 7.9 108 40-158 10-119 (253)
80 3c8m_A Homoserine dehydrogenas 98.2 3.2E-06 1.1E-10 80.5 7.7 159 41-211 5-196 (331)
81 3nkl_A UDP-D-quinovosamine 4-d 98.1 5.4E-06 1.9E-10 68.2 7.1 89 40-129 2-98 (141)
82 4dll_A 2-hydroxy-3-oxopropiona 98.1 1.9E-05 6.5E-10 74.4 10.7 112 40-156 29-147 (320)
83 3ing_A Homoserine dehydrogenas 98.0 5E-06 1.7E-10 79.1 6.6 159 41-211 3-192 (325)
84 3pef_A 6-phosphogluconate dehy 98.0 1.7E-05 5.8E-10 73.2 8.9 109 43-156 2-118 (287)
85 3doj_A AT3G25530, dehydrogenas 98.0 2E-05 6.9E-10 73.8 8.7 113 39-156 18-138 (310)
86 4gbj_A 6-phosphogluconate dehy 97.9 7.3E-05 2.5E-09 69.9 11.6 112 43-159 6-124 (297)
87 4e21_A 6-phosphogluconate dehy 97.9 3.1E-05 1E-09 74.5 9.1 113 41-156 21-138 (358)
88 3dmy_A Protein FDRA; predicted 97.9 0.00047 1.6E-08 68.7 17.8 256 42-324 112-412 (480)
89 1ebf_A Homoserine dehydrogenas 97.9 1.8E-05 6.2E-10 76.1 7.3 112 40-157 2-142 (358)
90 3abi_A Putative uncharacterize 97.9 8.4E-06 2.9E-10 78.1 4.8 114 37-159 11-132 (365)
91 3tri_A Pyrroline-5-carboxylate 97.9 6.6E-05 2.2E-09 69.5 10.4 95 42-140 3-107 (280)
92 2h78_A Hibadh, 3-hydroxyisobut 97.8 5.6E-05 1.9E-09 70.1 9.5 110 42-156 3-120 (302)
93 3qha_A Putative oxidoreductase 97.8 8.4E-05 2.9E-09 69.1 10.7 109 42-156 15-128 (296)
94 3qsg_A NAD-binding phosphogluc 97.8 3.1E-05 1.1E-09 72.7 7.7 115 38-157 20-143 (312)
95 3l6d_A Putative oxidoreductase 97.8 3.6E-05 1.2E-09 72.0 7.8 110 42-156 9-124 (306)
96 2rcy_A Pyrroline carboxylate r 97.8 3.7E-05 1.3E-09 69.6 7.6 89 43-138 5-98 (262)
97 1yb4_A Tartronic semialdehyde 97.8 0.00012 4E-09 67.3 10.6 107 43-156 4-119 (295)
98 2ahr_A Putative pyrroline carb 97.8 2.6E-05 8.7E-10 70.7 5.7 92 42-139 3-98 (259)
99 3pdu_A 3-hydroxyisobutyrate de 97.8 6.2E-05 2.1E-09 69.4 8.2 109 43-156 2-118 (287)
100 1nvm_B Acetaldehyde dehydrogen 97.7 4.2E-05 1.4E-09 72.2 7.0 90 41-132 3-105 (312)
101 3d1l_A Putative NADP oxidoredu 97.7 3.7E-05 1.3E-09 69.9 6.4 93 43-138 11-109 (266)
102 1vpd_A Tartronate semialdehyde 97.7 0.00011 3.8E-09 67.7 9.6 107 43-156 6-122 (299)
103 3ufx_B Succinyl-COA synthetase 97.7 0.00018 6.1E-09 70.1 11.4 123 179-322 246-372 (397)
104 3b1f_A Putative prephenate deh 97.7 8.2E-05 2.8E-09 68.4 8.3 110 42-156 6-124 (290)
105 2czc_A Glyceraldehyde-3-phosph 97.7 5.4E-05 1.8E-09 72.0 7.2 87 43-134 3-112 (334)
106 3ggo_A Prephenate dehydrogenas 97.7 0.00015 5E-09 68.3 10.1 100 41-146 32-142 (314)
107 3cky_A 2-hydroxymethyl glutara 97.7 0.00015 5.2E-09 66.8 9.9 109 41-156 3-121 (301)
108 4huj_A Uncharacterized protein 97.7 5.1E-05 1.7E-09 67.5 6.0 99 34-135 15-117 (220)
109 2ejw_A HDH, homoserine dehydro 97.7 3.2E-05 1.1E-09 73.7 4.8 104 41-150 2-116 (332)
110 2gf2_A Hibadh, 3-hydroxyisobut 97.7 0.00013 4.5E-09 67.0 8.8 107 44-155 2-116 (296)
111 3ic5_A Putative saccharopine d 97.6 0.00019 6.4E-09 56.1 8.2 86 42-132 5-101 (118)
112 2uyy_A N-PAC protein; long-cha 97.6 0.00013 4.4E-09 68.0 8.4 109 43-156 31-147 (316)
113 3obb_A Probable 3-hydroxyisobu 97.6 0.00022 7.4E-09 66.8 9.7 108 43-155 4-119 (300)
114 1i36_A Conserved hypothetical 97.6 0.00018 6.1E-09 65.1 8.8 100 44-151 2-106 (264)
115 3fr7_A Putative ketol-acid red 97.6 7.2E-05 2.5E-09 74.6 6.5 118 43-163 55-186 (525)
116 2ozp_A N-acetyl-gamma-glutamyl 97.6 0.00012 4E-09 70.1 7.7 91 41-135 3-103 (345)
117 2z2v_A Hypothetical protein PH 97.6 7.5E-05 2.6E-09 71.9 6.4 107 40-155 14-129 (365)
118 2p4q_A 6-phosphogluconate dehy 97.5 0.00021 7.3E-09 71.5 9.0 111 42-156 10-132 (497)
119 3g0o_A 3-hydroxyisobutyrate de 97.5 0.00011 3.8E-09 68.3 6.5 111 41-156 6-125 (303)
120 2cvz_A Dehydrogenase, 3-hydrox 97.5 0.00033 1.1E-08 64.0 9.0 106 44-156 3-113 (289)
121 3dr3_A N-acetyl-gamma-glutamyl 97.5 0.00021 7.2E-09 68.2 7.8 92 41-135 3-110 (337)
122 3ktd_A Prephenate dehydrogenas 97.5 0.00017 5.8E-09 68.9 7.2 112 40-156 6-122 (341)
123 1b7g_O Protein (glyceraldehyde 97.5 0.00014 4.8E-09 69.4 6.5 83 43-128 2-106 (340)
124 2zyd_A 6-phosphogluconate dehy 97.5 0.00018 6.2E-09 71.7 7.5 110 43-156 16-136 (480)
125 2iz1_A 6-phosphogluconate dehy 97.5 0.00029 9.9E-09 70.0 8.9 110 43-156 6-126 (474)
126 4ezb_A Uncharacterized conserv 97.4 0.00029 9.8E-09 66.3 8.0 108 42-156 24-144 (317)
127 2ep5_A 350AA long hypothetical 97.4 0.00023 7.8E-09 68.1 7.5 90 41-134 3-111 (350)
128 2py6_A Methyltransferase FKBM; 97.4 2.3E-05 7.9E-10 76.5 0.0 87 40-130 50-140 (409)
129 1z82_A Glycerol-3-phosphate de 97.4 6.5E-05 2.2E-09 70.9 3.1 91 42-138 14-118 (335)
130 3ba1_A HPPR, hydroxyphenylpyru 97.4 0.00016 5.6E-09 68.8 5.8 106 42-156 164-274 (333)
131 2izz_A Pyrroline-5-carboxylate 97.4 0.00039 1.3E-08 65.3 8.3 94 42-139 22-126 (322)
132 2pv7_A T-protein [includes: ch 97.4 0.00067 2.3E-08 63.0 9.8 97 43-156 22-119 (298)
133 1cf2_P Protein (glyceraldehyde 97.4 0.00042 1.4E-08 66.0 8.3 86 43-132 2-110 (337)
134 2f1k_A Prephenate dehydrogenas 97.4 0.00049 1.7E-08 62.7 8.5 95 44-143 2-102 (279)
135 3gt0_A Pyrroline-5-carboxylate 97.3 0.00017 6E-09 64.9 5.2 93 43-139 3-105 (247)
136 4gwg_A 6-phosphogluconate dehy 97.3 0.00051 1.8E-08 68.6 9.0 112 42-157 4-127 (484)
137 2fp4_B Succinyl-COA ligase [GD 97.3 0.0027 9.1E-08 61.8 13.6 122 179-321 262-389 (395)
138 2pgd_A 6-phosphogluconate dehy 97.3 0.00065 2.2E-08 67.6 9.3 110 43-156 3-124 (482)
139 4dgs_A Dehydrogenase; structur 97.3 0.00061 2.1E-08 65.0 8.4 105 41-153 170-278 (340)
140 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.2 0.0006 2.1E-08 67.8 8.3 110 43-156 2-126 (478)
141 3k96_A Glycerol-3-phosphate de 97.2 0.00049 1.7E-08 66.0 7.2 93 41-137 28-139 (356)
142 4dpl_A Malonyl-COA/succinyl-CO 97.2 0.00058 2E-08 65.6 7.4 91 40-134 5-113 (359)
143 4dpk_A Malonyl-COA/succinyl-CO 97.2 0.00058 2E-08 65.6 7.4 91 40-134 5-113 (359)
144 3dtt_A NADP oxidoreductase; st 97.2 0.00031 1.1E-08 63.4 5.0 90 40-133 17-126 (245)
145 1xyg_A Putative N-acetyl-gamma 97.2 0.00057 1.9E-08 65.6 6.8 90 41-135 15-116 (359)
146 3uw3_A Aspartate-semialdehyde 97.2 0.0012 4.1E-08 63.9 9.1 115 40-160 2-139 (377)
147 3pid_A UDP-glucose 6-dehydroge 97.2 0.0015 5.1E-08 64.3 9.9 111 41-160 35-179 (432)
148 2nu8_B SCS-beta, succinyl-COA 97.1 0.0075 2.6E-07 58.4 14.6 123 179-322 255-383 (388)
149 2g5c_A Prephenate dehydrogenas 97.1 0.0019 6.4E-08 58.9 9.4 101 43-146 2-110 (281)
150 3e5r_O PP38, glyceraldehyde-3- 97.1 0.00046 1.6E-08 65.8 5.4 86 43-129 4-123 (337)
151 3hsk_A Aspartate-semialdehyde 97.1 0.001 3.5E-08 64.4 7.9 91 41-134 18-127 (381)
152 2g0t_A Conserved hypothetical 97.1 0.002 6.7E-08 61.8 9.7 111 41-157 21-150 (350)
153 3gvx_A Glycerate dehydrogenase 97.1 0.0006 2.1E-08 63.7 6.0 105 41-153 121-229 (290)
154 3c24_A Putative oxidoreductase 97.1 0.0008 2.7E-08 61.8 6.8 88 43-134 12-104 (286)
155 1np3_A Ketol-acid reductoisome 97.1 0.00056 1.9E-08 64.9 5.9 87 43-134 17-109 (338)
156 1u8f_O GAPDH, glyceraldehyde-3 97.0 0.00041 1.4E-08 66.0 4.5 88 43-132 4-123 (335)
157 3pzr_A Aspartate-semialdehyde 97.0 0.0025 8.6E-08 61.5 9.9 112 43-160 1-135 (370)
158 1jay_A Coenzyme F420H2:NADP+ o 97.0 0.00085 2.9E-08 58.5 6.1 88 44-135 2-101 (212)
159 1txg_A Glycerol-3-phosphate de 97.0 0.00061 2.1E-08 63.5 5.4 87 44-134 2-107 (335)
160 1yqg_A Pyrroline-5-carboxylate 97.0 0.00034 1.1E-08 63.2 3.3 87 44-136 2-93 (263)
161 2nqt_A N-acetyl-gamma-glutamyl 97.0 0.0011 3.9E-08 63.5 7.1 89 42-135 9-114 (352)
162 1t4b_A Aspartate-semialdehyde 96.9 0.0028 9.7E-08 61.0 9.5 83 43-129 2-95 (367)
163 1ys4_A Aspartate-semialdehyde 96.9 0.0017 5.9E-08 62.0 7.8 88 43-132 9-115 (354)
164 2raf_A Putative dinucleotide-b 96.9 0.0044 1.5E-07 54.4 9.4 76 41-135 18-94 (209)
165 3pwk_A Aspartate-semialdehyde 96.9 0.0032 1.1E-07 60.6 9.2 90 42-134 2-98 (366)
166 2r00_A Aspartate-semialdehyde 96.9 0.002 7E-08 61.2 7.7 92 41-134 2-99 (336)
167 1vkn_A N-acetyl-gamma-glutamyl 96.9 0.0021 7.2E-08 61.6 7.8 91 40-135 11-111 (351)
168 1evy_A Glycerol-3-phosphate de 96.8 0.0011 3.8E-08 62.9 5.6 90 44-138 17-131 (366)
169 3dhn_A NAD-dependent epimerase 96.8 0.0028 9.4E-08 55.2 7.7 88 42-132 4-112 (227)
170 3pp8_A Glyoxylate/hydroxypyruv 96.8 0.0011 3.7E-08 62.6 5.3 105 41-153 138-249 (315)
171 4ea9_A Perosamine N-acetyltran 96.8 0.0039 1.3E-07 55.0 8.3 90 42-132 12-104 (220)
172 1qp8_A Formate dehydrogenase; 96.8 0.0019 6.5E-08 60.5 6.4 103 41-152 123-229 (303)
173 4ina_A Saccharopine dehydrogen 96.7 0.0021 7.2E-08 62.4 6.9 112 43-159 2-142 (405)
174 2w2k_A D-mandelate dehydrogena 96.7 0.0026 8.8E-08 60.7 7.3 110 41-156 162-279 (348)
175 2hjs_A USG-1 protein homolog; 96.7 0.0027 9.3E-08 60.4 7.4 90 42-135 6-103 (340)
176 3e8x_A Putative NAD-dependent 96.7 0.0041 1.4E-07 54.7 8.1 93 37-132 16-131 (236)
177 4e12_A Diketoreductase; oxidor 96.7 0.0021 7E-08 59.2 6.2 91 42-138 4-128 (283)
178 1mx3_A CTBP1, C-terminal bindi 96.7 0.0015 5E-08 62.5 5.2 107 41-153 167-279 (347)
179 1f0y_A HCDH, L-3-hydroxyacyl-C 96.7 0.0025 8.5E-08 59.0 6.6 94 41-138 14-143 (302)
180 2vns_A Metalloreductase steap3 96.7 0.00078 2.7E-08 59.6 2.9 89 42-137 28-121 (215)
181 2axq_A Saccharopine dehydrogen 96.6 0.0047 1.6E-07 61.3 8.6 107 41-155 22-140 (467)
182 3dqp_A Oxidoreductase YLBE; al 96.6 0.0033 1.1E-07 54.7 6.6 86 44-132 2-106 (219)
183 3gg2_A Sugar dehydrogenase, UD 96.6 0.0079 2.7E-07 59.3 9.7 98 43-144 3-134 (450)
184 2g1u_A Hypothetical protein TM 96.6 0.013 4.4E-07 48.6 9.6 91 42-134 19-121 (155)
185 1sc6_A PGDH, D-3-phosphoglycer 96.5 0.0044 1.5E-07 60.4 7.6 105 41-152 144-252 (404)
186 1lss_A TRK system potassium up 96.5 0.0098 3.3E-07 47.5 8.4 92 41-134 3-105 (140)
187 4g2n_A D-isomer specific 2-hyd 96.5 0.005 1.7E-07 58.8 7.5 107 41-153 172-283 (345)
188 1hdo_A Biliverdin IX beta redu 96.5 0.0087 3E-07 50.8 8.2 87 43-132 4-111 (206)
189 1x0v_A GPD-C, GPDH-C, glycerol 96.5 0.0068 2.3E-07 57.0 8.2 89 43-135 9-128 (354)
190 1yj8_A Glycerol-3-phosphate de 96.5 0.0026 9E-08 60.7 5.4 90 43-136 22-146 (375)
191 1bg6_A N-(1-D-carboxylethyl)-L 96.5 0.0053 1.8E-07 57.5 7.3 89 42-134 4-111 (359)
192 1ks9_A KPA reductase;, 2-dehyd 96.4 0.0089 3E-07 54.1 8.4 88 44-136 2-102 (291)
193 1dxy_A D-2-hydroxyisocaproate 96.4 0.0076 2.6E-07 57.1 8.2 105 42-153 145-253 (333)
194 1mv8_A GMD, GDP-mannose 6-dehy 96.4 0.01 3.6E-07 57.9 9.5 74 44-121 2-108 (436)
195 1ff9_A Saccharopine reductase; 96.4 0.0069 2.4E-07 59.7 8.1 106 42-155 3-120 (450)
196 2q3e_A UDP-glucose 6-dehydroge 96.4 0.013 4.3E-07 57.9 9.9 101 42-146 5-145 (467)
197 2yjz_A Metalloreductase steap4 95.4 0.00055 1.9E-08 60.2 0.0 90 41-136 18-110 (201)
198 3tz6_A Aspartate-semialdehyde 96.4 0.0085 2.9E-07 57.2 8.3 89 43-134 2-97 (344)
199 3e48_A Putative nucleoside-dip 96.4 0.0064 2.2E-07 55.0 7.1 87 44-132 2-106 (289)
200 3i83_A 2-dehydropantoate 2-red 96.4 0.0063 2.1E-07 56.8 7.2 90 43-137 3-111 (320)
201 3ulk_A Ketol-acid reductoisome 96.3 0.0023 8E-08 62.9 4.2 119 35-163 32-160 (491)
202 2ekl_A D-3-phosphoglycerate de 96.3 0.0042 1.4E-07 58.3 5.8 106 41-153 141-252 (313)
203 3k5p_A D-3-phosphoglycerate de 96.3 0.012 4.1E-07 57.6 9.1 106 41-153 155-264 (416)
204 2y0c_A BCEC, UDP-glucose dehyd 96.3 0.013 4.3E-07 58.3 9.3 101 41-145 7-141 (478)
205 3r6d_A NAD-dependent epimerase 96.3 0.0064 2.2E-07 52.9 6.5 86 44-132 7-108 (221)
206 1gdh_A D-glycerate dehydrogena 96.3 0.0033 1.1E-07 59.3 4.8 66 41-110 145-213 (320)
207 2cuk_A Glycerate dehydrogenase 96.3 0.0042 1.4E-07 58.3 5.5 97 41-146 143-243 (311)
208 3jtm_A Formate dehydrogenase, 96.3 0.0064 2.2E-07 58.2 6.7 65 41-109 163-230 (351)
209 2d0i_A Dehydrogenase; structur 96.3 0.0055 1.9E-07 58.0 6.2 107 41-156 145-258 (333)
210 3dfu_A Uncharacterized protein 96.2 0.017 5.9E-07 52.1 9.1 73 40-134 4-77 (232)
211 1xdw_A NAD+-dependent (R)-2-hy 96.2 0.0046 1.6E-07 58.5 5.5 64 42-110 146-209 (331)
212 3evt_A Phosphoglycerate dehydr 96.2 0.0049 1.7E-07 58.3 5.6 107 41-153 136-247 (324)
213 2rir_A Dipicolinate synthase, 96.2 0.0012 4.2E-08 61.2 1.5 115 41-165 156-276 (300)
214 1dlj_A UDP-glucose dehydrogena 96.2 0.0095 3.2E-07 57.7 7.8 98 44-146 2-131 (402)
215 2ph5_A Homospermidine synthase 96.2 0.009 3.1E-07 59.3 7.6 80 43-126 14-110 (480)
216 3hwr_A 2-dehydropantoate 2-red 96.2 0.0097 3.3E-07 55.6 7.5 95 40-138 17-127 (318)
217 2ew2_A 2-dehydropantoate 2-red 96.2 0.009 3.1E-07 54.7 7.1 92 43-136 4-113 (316)
218 3d4o_A Dipicolinate synthase s 96.2 0.0019 6.6E-08 59.8 2.5 115 41-165 154-274 (293)
219 2nac_A NAD-dependent formate d 96.2 0.0049 1.7E-07 59.9 5.4 107 41-153 190-303 (393)
220 4a7p_A UDP-glucose dehydrogena 96.2 0.018 6E-07 56.8 9.5 102 41-146 7-143 (446)
221 2i76_A Hypothetical protein; N 96.2 0.00038 1.3E-08 63.9 -2.4 89 43-137 3-95 (276)
222 3m2p_A UDP-N-acetylglucosamine 96.1 0.017 5.8E-07 52.8 8.8 86 43-132 3-109 (311)
223 2g76_A 3-PGDH, D-3-phosphoglyc 96.1 0.0059 2E-07 58.0 5.8 105 41-152 164-274 (335)
224 2yq5_A D-isomer specific 2-hyd 96.1 0.0062 2.1E-07 58.1 5.9 64 41-109 147-210 (343)
225 3ruf_A WBGU; rossmann fold, UD 96.1 0.0037 1.3E-07 58.2 4.2 90 41-132 24-151 (351)
226 1r0k_A 1-deoxy-D-xylulose 5-ph 96.1 0.008 2.7E-07 58.2 6.7 110 42-155 4-147 (388)
227 3hn2_A 2-dehydropantoate 2-red 96.1 0.023 7.8E-07 52.8 9.4 90 43-137 3-109 (312)
228 4fgw_A Glycerol-3-phosphate de 96.1 0.0081 2.8E-07 58.3 6.4 94 39-135 31-155 (391)
229 2d5c_A AROE, shikimate 5-dehyd 96.1 0.0019 6.4E-08 58.8 1.8 103 41-155 116-226 (263)
230 1wwk_A Phosphoglycerate dehydr 96.0 0.0064 2.2E-07 56.9 5.4 66 41-111 141-208 (307)
231 2dbq_A Glyoxylate reductase; D 96.0 0.0062 2.1E-07 57.6 5.3 66 41-111 149-216 (334)
232 3qvo_A NMRA family protein; st 96.0 0.015 5.2E-07 51.2 7.5 88 42-132 23-125 (236)
233 3a06_A 1-deoxy-D-xylulose 5-ph 96.0 0.02 6.7E-07 55.0 8.7 108 43-155 4-139 (376)
234 3oet_A Erythronate-4-phosphate 96.0 0.0063 2.2E-07 58.9 5.3 63 42-110 119-181 (381)
235 2pi1_A D-lactate dehydrogenase 96.0 0.0076 2.6E-07 57.2 5.8 106 41-153 140-250 (334)
236 3cps_A Glyceraldehyde 3-phosph 96.0 0.0047 1.6E-07 59.2 4.3 87 42-129 17-135 (354)
237 2gas_A Isoflavone reductase; N 96.0 0.026 8.9E-07 51.2 9.1 86 43-131 3-111 (307)
238 2x5j_O E4PDH, D-erythrose-4-ph 96.0 0.0078 2.7E-07 57.3 5.7 90 43-133 3-126 (339)
239 1j4a_A D-LDH, D-lactate dehydr 96.0 0.0066 2.3E-07 57.5 5.1 105 42-153 146-255 (333)
240 2wm3_A NMRA-like family domain 96.0 0.021 7.3E-07 51.8 8.5 89 42-132 5-115 (299)
241 1qyc_A Phenylcoumaran benzylic 95.9 0.024 8.2E-07 51.5 8.7 87 43-132 5-113 (308)
242 2qyt_A 2-dehydropantoate 2-red 95.9 0.0058 2E-07 56.3 4.5 91 41-136 7-122 (317)
243 3b1j_A Glyceraldehyde 3-phosph 95.9 0.016 5.5E-07 55.1 7.5 86 43-129 3-121 (339)
244 2j6i_A Formate dehydrogenase; 95.9 0.0069 2.4E-07 58.1 5.1 107 41-153 163-277 (364)
245 2o3j_A UDP-glucose 6-dehydroge 95.9 0.043 1.5E-06 54.4 10.9 101 42-146 9-149 (481)
246 2obn_A Hypothetical protein; s 95.9 0.019 6.5E-07 54.9 7.9 163 43-216 8-192 (349)
247 3ew7_A LMO0794 protein; Q8Y8U8 95.9 0.029 9.9E-07 48.1 8.5 86 44-132 2-103 (221)
248 2gcg_A Glyoxylate reductase/hy 95.8 0.006 2E-07 57.6 4.3 65 41-110 154-221 (330)
249 3cmc_O GAPDH, glyceraldehyde-3 95.8 0.0047 1.6E-07 58.7 3.5 86 43-129 2-118 (334)
250 3c1o_A Eugenol synthase; pheny 95.8 0.03 1E-06 51.3 8.9 84 43-128 5-110 (321)
251 1qyd_A Pinoresinol-lariciresin 95.8 0.029 9.8E-07 51.1 8.7 84 43-128 5-113 (313)
252 3hg7_A D-isomer specific 2-hyd 95.8 0.014 4.9E-07 55.1 6.8 65 41-109 139-204 (324)
253 2dpo_A L-gulonate 3-dehydrogen 95.8 0.0083 2.8E-07 56.5 4.8 93 42-138 6-130 (319)
254 4id9_A Short-chain dehydrogena 95.7 0.019 6.5E-07 53.2 7.3 91 40-132 17-126 (347)
255 2bka_A CC3, TAT-interacting pr 95.7 0.044 1.5E-06 47.9 9.2 89 42-132 18-132 (242)
256 2g82_O GAPDH, glyceraldehyde-3 95.7 0.013 4.4E-07 55.6 6.1 89 43-132 1-119 (331)
257 3gg9_A D-3-phosphoglycerate de 95.7 0.0037 1.3E-07 59.8 2.3 66 41-110 159-226 (352)
258 2o4c_A Erythronate-4-phosphate 95.7 0.0052 1.8E-07 59.5 3.3 65 41-111 115-179 (380)
259 1gr0_A Inositol-3-phosphate sy 95.7 0.15 5.1E-06 48.8 13.2 144 40-213 13-228 (367)
260 2d2i_A Glyceraldehyde 3-phosph 95.7 0.019 6.4E-07 55.5 7.1 86 43-129 3-121 (380)
261 1rm4_O Glyceraldehyde 3-phosph 95.6 0.012 4E-07 56.0 5.5 91 43-135 2-126 (337)
262 2x4g_A Nucleoside-diphosphate- 95.6 0.03 1E-06 51.5 8.2 89 42-132 13-126 (342)
263 2hmt_A YUAA protein; RCK, KTN, 95.6 0.017 5.8E-07 46.2 5.7 89 43-133 7-106 (144)
264 2q1s_A Putative nucleotide sug 95.5 0.021 7.1E-07 54.0 6.8 89 41-132 31-151 (377)
265 3ego_A Probable 2-dehydropanto 95.5 0.012 4.3E-07 54.6 4.9 90 43-137 3-105 (307)
266 1ygy_A PGDH, D-3-phosphoglycer 95.5 0.013 4.6E-07 58.8 5.5 106 41-153 141-252 (529)
267 1id1_A Putative potassium chan 95.5 0.045 1.5E-06 45.0 7.9 87 43-133 4-107 (153)
268 1gad_O D-glyceraldehyde-3-phos 95.4 0.018 6.1E-07 54.6 5.9 90 43-134 2-122 (330)
269 1zej_A HBD-9, 3-hydroxyacyl-CO 95.4 0.0056 1.9E-07 57.1 2.3 90 40-138 10-114 (293)
270 2r6j_A Eugenol synthase 1; phe 95.4 0.061 2.1E-06 49.2 9.3 86 44-132 13-115 (318)
271 2c5a_A GDP-mannose-3', 5'-epim 95.4 0.069 2.4E-06 50.4 9.9 91 40-132 27-145 (379)
272 4e5n_A Thermostable phosphite 95.4 0.0095 3.3E-07 56.4 3.8 106 41-153 144-256 (330)
273 2pk3_A GDP-6-deoxy-D-LYXO-4-he 95.4 0.024 8.3E-07 51.8 6.5 92 39-132 9-126 (321)
274 3g17_A Similar to 2-dehydropan 95.4 0.0064 2.2E-07 56.1 2.5 93 43-138 3-103 (294)
275 4egb_A DTDP-glucose 4,6-dehydr 95.4 0.025 8.7E-07 52.3 6.7 93 39-132 21-149 (346)
276 4hy3_A Phosphoglycerate oxidor 95.3 0.021 7.2E-07 54.9 6.1 106 41-153 175-286 (365)
277 3c85_A Putative glutathione-re 95.3 0.015 5.1E-07 49.4 4.5 88 42-131 39-139 (183)
278 1xgk_A Nitrogen metabolite rep 95.3 0.043 1.5E-06 51.7 8.2 192 42-244 5-246 (352)
279 3i6i_A Putative leucoanthocyan 95.3 0.04 1.4E-06 51.2 7.8 86 43-128 11-116 (346)
280 1hdg_O Holo-D-glyceraldehyde-3 95.2 0.022 7.5E-07 54.0 5.8 86 43-129 1-119 (332)
281 2hk9_A Shikimate dehydrogenase 95.2 0.0094 3.2E-07 54.6 3.1 69 41-113 128-200 (275)
282 2zcu_A Uncharacterized oxidore 95.2 0.019 6.4E-07 51.5 5.0 86 44-132 1-104 (286)
283 3ghy_A Ketopantoate reductase 95.2 0.027 9.2E-07 52.8 6.2 87 43-134 4-107 (335)
284 1e6u_A GDP-fucose synthetase; 95.2 0.042 1.4E-06 50.2 7.4 86 42-132 3-107 (321)
285 1n7h_A GDP-D-mannose-4,6-dehyd 95.2 0.017 5.9E-07 54.4 4.8 58 15-73 1-59 (381)
286 3enk_A UDP-glucose 4-epimerase 95.0 0.062 2.1E-06 49.4 8.1 92 41-132 4-129 (341)
287 2a35_A Hypothetical protein PA 94.9 0.11 3.8E-06 44.2 9.0 88 42-132 5-114 (215)
288 2yyy_A Glyceraldehyde-3-phosph 94.8 0.016 5.6E-07 55.2 3.7 87 43-134 3-115 (343)
289 3h2s_A Putative NADH-flavin re 94.8 0.057 1.9E-06 46.5 6.9 29 44-72 2-30 (224)
290 2gn4_A FLAA1 protein, UDP-GLCN 94.8 0.069 2.3E-06 50.0 7.8 96 33-133 14-143 (344)
291 2pzm_A Putative nucleotide sug 94.8 0.054 1.8E-06 50.0 7.0 91 42-132 20-136 (330)
292 2c20_A UDP-glucose 4-epimerase 94.7 0.1 3.5E-06 47.7 8.6 90 43-132 2-118 (330)
293 1xq6_A Unknown protein; struct 94.6 0.14 4.9E-06 44.4 9.2 88 42-132 4-133 (253)
294 3oh8_A Nucleoside-diphosphate 94.6 0.077 2.6E-06 52.7 8.2 88 42-132 147-254 (516)
295 2yv3_A Aspartate-semialdehyde 94.6 0.028 9.5E-07 53.2 4.7 87 43-134 1-95 (331)
296 3ay3_A NAD-dependent epimerase 94.5 0.044 1.5E-06 48.9 5.6 32 43-75 3-34 (267)
297 2i99_A MU-crystallin homolog; 94.5 0.03 1E-06 52.2 4.6 80 40-124 133-220 (312)
298 3sc6_A DTDP-4-dehydrorhamnose 94.5 0.024 8.4E-07 50.9 3.9 83 43-132 6-106 (287)
299 3g79_A NDP-N-acetyl-D-galactos 94.5 0.12 4.2E-06 51.3 9.2 42 34-77 8-53 (478)
300 3fwz_A Inner membrane protein 94.4 0.028 9.5E-07 45.8 3.7 74 44-122 9-95 (140)
301 3oj0_A Glutr, glutamyl-tRNA re 94.4 0.01 3.5E-07 48.5 1.0 66 42-111 21-92 (144)
302 1vl0_A DTDP-4-dehydrorhamnose 94.4 0.046 1.6E-06 49.2 5.4 85 41-132 11-113 (292)
303 2jl1_A Triphenylmethane reduct 94.4 0.038 1.3E-06 49.5 4.9 86 44-132 2-107 (287)
304 1sb8_A WBPP; epimerase, 4-epim 94.4 0.11 3.8E-06 48.2 8.1 90 41-132 26-153 (352)
305 2q1w_A Putative nucleotide sug 94.3 0.13 4.3E-06 47.5 8.4 92 41-132 20-137 (333)
306 1y1p_A ARII, aldehyde reductas 94.3 0.16 5.4E-06 46.4 8.9 91 40-132 9-132 (342)
307 3llv_A Exopolyphosphatase-rela 94.2 0.073 2.5E-06 42.9 5.9 86 43-131 7-103 (141)
308 3ojo_A CAP5O; rossmann fold, c 94.1 0.35 1.2E-05 47.3 11.4 106 42-151 11-148 (431)
309 3vps_A TUNA, NAD-dependent epi 94.1 0.068 2.3E-06 48.4 6.0 88 42-132 7-119 (321)
310 3kb6_A D-lactate dehydrogenase 94.1 0.031 1.1E-06 52.9 3.7 106 41-153 140-250 (334)
311 2ewd_A Lactate dehydrogenase,; 94.0 0.14 4.9E-06 47.5 8.1 80 42-128 4-117 (317)
312 3gpi_A NAD-dependent epimerase 94.0 0.055 1.9E-06 48.7 5.1 88 43-132 4-109 (286)
313 3slg_A PBGP3 protein; structur 93.9 0.14 4.9E-06 47.7 8.0 88 42-132 24-141 (372)
314 1zcj_A Peroxisomal bifunctiona 93.9 0.1 3.5E-06 51.4 7.1 100 7-120 5-137 (463)
315 1smk_A Malate dehydrogenase, g 93.8 0.22 7.6E-06 46.6 9.1 89 41-132 7-125 (326)
316 3sxp_A ADP-L-glycero-D-mannohe 93.7 0.16 5.5E-06 47.3 7.9 89 41-132 9-138 (362)
317 2yy7_A L-threonine dehydrogena 93.6 0.098 3.3E-06 47.3 6.0 89 43-132 3-118 (312)
318 3st7_A Capsular polysaccharide 93.6 0.078 2.7E-06 49.7 5.5 78 43-132 1-94 (369)
319 1ek6_A UDP-galactose 4-epimera 93.6 0.16 5.6E-06 46.7 7.6 90 43-132 3-132 (348)
320 1hyh_A L-hicdh, L-2-hydroxyiso 93.5 0.15 5.3E-06 47.1 7.4 85 43-132 2-123 (309)
321 4b8w_A GDP-L-fucose synthase; 93.5 0.27 9.2E-06 44.0 8.8 87 41-132 5-113 (319)
322 2z1m_A GDP-D-mannose dehydrata 93.5 0.12 4.1E-06 47.3 6.5 91 42-132 3-127 (345)
323 3h9e_O Glyceraldehyde-3-phosph 93.5 0.19 6.3E-06 47.9 7.8 92 40-132 5-127 (346)
324 1rpn_A GDP-mannose 4,6-dehydra 93.4 0.19 6.5E-06 46.0 7.8 92 41-132 13-138 (335)
325 1n2s_A DTDP-4-, DTDP-glucose o 93.4 0.071 2.4E-06 48.1 4.8 84 44-132 2-104 (299)
326 3ajr_A NDP-sugar epimerase; L- 93.4 0.15 5.1E-06 46.3 7.0 89 44-132 1-112 (317)
327 2ydy_A Methionine adenosyltran 93.4 0.12 4.2E-06 46.9 6.3 88 43-132 3-110 (315)
328 1rkx_A CDP-glucose-4,6-dehydra 93.4 0.24 8.3E-06 45.8 8.5 90 42-132 9-132 (357)
329 3k6j_A Protein F01G10.3, confi 93.3 0.2 7E-06 49.4 8.1 124 9-138 22-173 (460)
330 2p5y_A UDP-glucose 4-epimerase 93.2 0.16 5.5E-06 46.1 6.9 89 44-132 2-117 (311)
331 3rft_A Uronate dehydrogenase; 93.2 0.1 3.4E-06 46.8 5.4 29 43-71 4-32 (267)
332 1zud_1 Adenylyltransferase THI 93.0 0.27 9.3E-06 44.3 8.0 36 41-77 27-62 (251)
333 2g6t_A Uncharacterized protein 93.0 0.16 5.5E-06 46.9 6.4 117 43-165 2-125 (306)
334 1obf_O Glyceraldehyde 3-phosph 93.0 0.2 6.8E-06 47.5 7.2 86 43-129 2-121 (335)
335 3ko8_A NAD-dependent epimerase 92.9 0.27 9.1E-06 44.5 7.9 85 44-132 2-113 (312)
336 3ius_A Uncharacterized conserv 92.9 0.11 3.9E-06 46.4 5.3 88 43-132 6-103 (286)
337 3mog_A Probable 3-hydroxybutyr 92.9 0.093 3.2E-06 52.1 5.0 88 43-137 6-126 (483)
338 1pzg_A LDH, lactate dehydrogen 92.8 0.23 7.8E-06 46.7 7.5 88 40-131 7-131 (331)
339 3l4b_C TRKA K+ channel protien 92.6 0.22 7.6E-06 43.2 6.6 86 44-132 2-100 (218)
340 1gy8_A UDP-galactose 4-epimera 92.6 0.38 1.3E-05 45.1 8.8 31 43-73 3-34 (397)
341 1jw9_B Molybdopterin biosynthe 92.5 0.3 1E-05 43.9 7.5 34 42-77 31-65 (249)
342 3ehe_A UDP-glucose 4-epimerase 92.3 0.3 1E-05 44.2 7.4 85 44-132 3-114 (313)
343 1r6d_A TDP-glucose-4,6-dehydra 92.2 0.53 1.8E-05 43.0 9.0 87 44-132 2-127 (337)
344 3c7a_A Octopine dehydrogenase; 92.2 0.081 2.8E-06 50.7 3.5 75 43-121 3-104 (404)
345 1gpj_A Glutamyl-tRNA reductase 92.2 0.13 4.6E-06 49.6 5.1 65 41-109 166-237 (404)
346 1a5z_A L-lactate dehydrogenase 92.1 0.24 8.3E-06 46.1 6.5 78 44-128 2-112 (319)
347 2ep7_A GAPDH, glyceraldehyde-3 91.7 0.07 2.4E-06 50.7 2.3 86 43-129 3-119 (342)
348 2hjr_A Malate dehydrogenase; m 91.7 0.39 1.3E-05 45.0 7.5 83 42-131 14-130 (328)
349 1orr_A CDP-tyvelose-2-epimeras 91.6 0.47 1.6E-05 43.3 7.9 90 43-132 2-125 (347)
350 1x7d_A Ornithine cyclodeaminas 91.6 0.23 7.9E-06 47.2 5.9 84 40-126 127-222 (350)
351 2rh8_A Anthocyanidin reductase 91.6 1.1 3.9E-05 40.7 10.5 89 42-132 9-131 (338)
352 1udb_A Epimerase, UDP-galactos 91.4 0.62 2.1E-05 42.6 8.4 89 44-132 2-124 (338)
353 1t2a_A GDP-mannose 4,6 dehydra 91.4 0.54 1.8E-05 43.8 8.1 31 43-73 25-55 (375)
354 1z45_A GAL10 bifunctional prot 91.2 0.52 1.8E-05 48.2 8.5 92 41-132 10-135 (699)
355 1guz_A Malate dehydrogenase; o 91.2 0.67 2.3E-05 42.9 8.5 61 44-109 2-79 (310)
356 1lld_A L-lactate dehydrogenase 91.1 0.37 1.3E-05 44.3 6.6 33 42-76 7-41 (319)
357 3dfz_A SIRC, precorrin-2 dehyd 91.1 0.3 1E-05 43.6 5.6 40 36-77 24-64 (223)
358 2i6t_A Ubiquitin-conjugating e 91.0 0.69 2.4E-05 42.9 8.4 86 42-132 14-125 (303)
359 3ce6_A Adenosylhomocysteinase; 90.8 0.16 5.6E-06 50.6 4.1 67 41-112 273-342 (494)
360 3l9w_A Glutathione-regulated p 90.8 0.18 6.1E-06 49.0 4.3 79 42-125 4-95 (413)
361 3nzo_A UDP-N-acetylglucosamine 90.7 0.34 1.2E-05 46.3 6.2 91 42-133 35-166 (399)
362 3u62_A Shikimate dehydrogenase 90.7 0.14 4.8E-06 46.4 3.2 65 41-110 108-177 (253)
363 1fjh_A 3alpha-hydroxysteroid d 90.7 0.55 1.9E-05 41.3 7.1 31 44-75 3-33 (257)
364 2c29_D Dihydroflavonol 4-reduc 90.6 1.1 3.9E-05 40.8 9.5 89 42-132 5-128 (337)
365 1oc2_A DTDP-glucose 4,6-dehydr 90.5 0.54 1.9E-05 43.1 7.2 87 43-132 5-125 (348)
366 1kew_A RMLB;, DTDP-D-glucose 4 90.3 0.42 1.4E-05 44.1 6.3 30 44-73 2-32 (361)
367 1db3_A GDP-mannose 4,6-dehydra 90.3 0.59 2E-05 43.3 7.2 30 43-72 2-31 (372)
368 2x6t_A ADP-L-glycero-D-manno-h 90.2 0.33 1.1E-05 45.0 5.4 89 42-132 46-163 (357)
369 1eq2_A ADP-L-glycero-D-mannohe 90.2 0.31 1.1E-05 43.8 5.1 87 44-132 1-116 (310)
370 2v6b_A L-LDH, L-lactate dehydr 90.1 0.46 1.6E-05 43.9 6.4 81 44-129 2-113 (304)
371 2ggs_A 273AA long hypothetical 90.1 0.4 1.4E-05 42.3 5.7 87 44-132 2-107 (273)
372 2hrz_A AGR_C_4963P, nucleoside 90.1 0.62 2.1E-05 42.6 7.2 91 41-132 13-141 (342)
373 1y8q_A Ubiquitin-like 1 activa 90.0 0.76 2.6E-05 43.4 7.9 118 41-164 35-163 (346)
374 2p4h_X Vestitone reductase; NA 90.0 0.89 3.1E-05 41.0 8.1 88 43-132 2-125 (322)
375 1wdk_A Fatty oxidation complex 89.8 0.17 5.9E-06 52.6 3.4 90 43-137 315-435 (715)
376 3eag_A UDP-N-acetylmuramate:L- 89.6 0.61 2.1E-05 43.4 6.7 82 41-126 3-93 (326)
377 4dqv_A Probable peptide synthe 89.5 0.36 1.2E-05 47.3 5.3 90 41-132 72-214 (478)
378 2nm0_A Probable 3-oxacyl-(acyl 89.4 0.94 3.2E-05 40.3 7.6 29 42-70 21-49 (253)
379 3pym_A GAPDH 3, glyceraldehyde 89.3 0.7 2.4E-05 43.6 6.9 88 43-131 2-121 (332)
380 1y6j_A L-lactate dehydrogenase 89.2 1.7 6E-05 40.3 9.5 86 41-131 6-122 (318)
381 2v6g_A Progesterone 5-beta-red 89.0 0.59 2E-05 43.1 6.2 86 43-128 2-116 (364)
382 2bll_A Protein YFBG; decarboxy 89.0 1.2 4E-05 40.6 8.1 86 44-132 2-117 (345)
383 1v8b_A Adenosylhomocysteinase; 89.0 0.19 6.6E-06 49.9 2.9 66 41-111 256-324 (479)
384 3rst_A Signal peptide peptidas 88.9 0.5 1.7E-05 42.3 5.4 54 222-275 33-91 (240)
385 3hja_A GAPDH, glyceraldehyde-3 88.9 0.14 4.7E-06 48.9 1.7 92 40-132 19-145 (356)
386 2hun_A 336AA long hypothetical 88.8 1.1 3.8E-05 40.7 7.8 89 42-132 3-127 (336)
387 2b69_A UDP-glucuronate decarbo 88.7 0.83 2.8E-05 41.9 6.9 33 41-73 26-58 (343)
388 2dkn_A 3-alpha-hydroxysteroid 88.6 0.68 2.3E-05 40.2 6.0 28 44-71 3-30 (255)
389 1b8p_A Protein (malate dehydro 88.6 1.1 3.6E-05 41.9 7.6 88 41-131 4-133 (329)
390 3ctm_A Carbonyl reductase; alc 88.4 1.8 6.1E-05 38.5 8.8 38 36-74 28-65 (279)
391 1i24_A Sulfolipid biosynthesis 88.4 1.1 3.9E-05 41.8 7.8 33 40-72 9-41 (404)
392 1o5i_A 3-oxoacyl-(acyl carrier 88.3 2 6.7E-05 37.9 8.9 34 41-75 18-51 (249)
393 3vku_A L-LDH, L-lactate dehydr 88.1 0.56 1.9E-05 44.1 5.3 91 36-130 3-123 (326)
394 2wtb_A MFP2, fatty acid multif 87.9 0.4 1.4E-05 49.9 4.6 91 43-138 313-434 (725)
395 3lk7_A UDP-N-acetylmuramoylala 87.8 0.7 2.4E-05 45.0 6.0 82 41-126 8-99 (451)
396 2aef_A Calcium-gated potassium 87.5 0.6 2E-05 40.8 4.9 83 42-129 9-103 (234)
397 1y7o_A ATP-dependent CLP prote 87.5 0.58 2E-05 41.4 4.8 52 224-275 63-115 (218)
398 3fi9_A Malate dehydrogenase; s 87.4 0.63 2.2E-05 44.1 5.3 82 40-126 6-119 (343)
399 1omo_A Alanine dehydrogenase; 87.4 0.55 1.9E-05 43.9 4.8 80 40-126 123-213 (322)
400 3don_A Shikimate dehydrogenase 87.0 0.27 9.3E-06 45.2 2.4 69 41-113 116-189 (277)
401 2wsb_A Galactitol dehydrogenas 87.0 2 6.8E-05 37.4 8.1 82 41-133 10-94 (254)
402 1xg5_A ARPG836; short chain de 86.8 1.5 5E-05 39.2 7.2 34 41-75 31-64 (279)
403 3d64_A Adenosylhomocysteinase; 86.7 0.5 1.7E-05 47.0 4.3 65 41-110 276-343 (494)
404 4hv4_A UDP-N-acetylmuramate--L 86.7 2.4 8.1E-05 41.8 9.3 81 38-125 18-107 (494)
405 3h5n_A MCCB protein; ubiquitin 86.4 1.3 4.5E-05 41.9 6.9 36 41-77 117-152 (353)
406 3o38_A Short chain dehydrogena 86.2 2.3 7.7E-05 37.6 8.1 92 34-134 14-111 (266)
407 2cby_A ATP-dependent CLP prote 86.1 0.78 2.7E-05 40.2 4.8 65 210-275 29-97 (208)
408 4f6c_A AUSA reductase domain p 86.0 0.51 1.7E-05 45.1 3.9 32 42-73 69-100 (427)
409 3h9u_A Adenosylhomocysteinase; 85.9 0.68 2.3E-05 45.4 4.7 98 41-144 210-311 (436)
410 1ldn_A L-lactate dehydrogenase 85.8 1.1 3.8E-05 41.6 6.0 35 41-77 5-41 (316)
411 1kyq_A Met8P, siroheme biosynt 85.8 0.62 2.1E-05 42.8 4.1 37 39-77 10-46 (274)
412 1uzm_A 3-oxoacyl-[acyl-carrier 85.7 2 6.8E-05 37.7 7.4 29 42-70 15-43 (247)
413 3orf_A Dihydropteridine reduct 85.6 1.8 6.1E-05 38.1 7.0 72 43-133 23-96 (251)
414 2ehd_A Oxidoreductase, oxidore 85.5 2 6.7E-05 37.1 7.2 78 43-133 6-87 (234)
415 2bma_A Glutamate dehydrogenase 85.5 1.2 4E-05 44.1 6.1 109 41-155 251-388 (470)
416 1leh_A Leucine dehydrogenase; 85.5 0.36 1.2E-05 46.2 2.5 83 41-131 172-260 (364)
417 3v1y_O PP38, glyceraldehyde-3- 85.2 1 3.4E-05 42.7 5.3 89 42-131 3-125 (337)
418 2vhw_A Alanine dehydrogenase; 85.1 0.42 1.4E-05 45.6 2.8 35 41-77 167-201 (377)
419 3un1_A Probable oxidoreductase 85.0 0.77 2.6E-05 41.0 4.4 84 34-134 20-106 (260)
420 4g65_A TRK system potassium up 84.9 0.7 2.4E-05 45.4 4.3 69 41-112 2-81 (461)
421 1yg6_A ATP-dependent CLP prote 84.8 0.97 3.3E-05 39.0 4.8 53 223-275 43-96 (193)
422 4fcc_A Glutamate dehydrogenase 84.8 2 6.7E-05 42.3 7.4 128 40-201 233-389 (450)
423 1ur5_A Malate dehydrogenase; o 84.8 1.8 6.3E-05 39.9 7.0 84 43-131 3-118 (309)
424 2egg_A AROE, shikimate 5-dehyd 84.8 0.48 1.6E-05 43.7 2.9 68 41-112 140-217 (297)
425 3doc_A Glyceraldehyde 3-phosph 84.6 1.3 4.3E-05 42.0 5.7 90 42-132 2-124 (335)
426 1t2d_A LDH-P, L-lactate dehydr 84.3 1.9 6.3E-05 40.2 6.8 85 42-131 4-125 (322)
427 3hdj_A Probable ornithine cycl 84.2 1 3.5E-05 42.0 4.9 67 39-110 118-194 (313)
428 3h8v_A Ubiquitin-like modifier 84.1 1.5 5.3E-05 40.5 6.0 37 41-78 35-71 (292)
429 3vtf_A UDP-glucose 6-dehydroge 84.1 3.9 0.00013 40.0 9.2 34 41-76 20-53 (444)
430 1pjq_A CYSG, siroheme synthase 84.1 1.6 5.6E-05 42.6 6.6 82 39-126 9-100 (457)
431 3lvf_P GAPDH 1, glyceraldehyde 84.0 2 7E-05 40.5 6.9 90 42-132 4-124 (338)
432 1y7t_A Malate dehydrogenase; N 83.9 2.8 9.5E-05 38.7 7.8 88 41-131 3-130 (327)
433 1z7e_A Protein aRNA; rossmann 83.9 2.7 9.2E-05 42.7 8.3 89 41-132 314-432 (660)
434 4da9_A Short-chain dehydrogena 83.7 1.2 4E-05 40.3 4.9 84 42-134 29-117 (280)
435 2fwm_X 2,3-dihydro-2,3-dihydro 83.6 3.6 0.00012 36.0 8.1 33 42-75 7-39 (250)
436 3ijr_A Oxidoreductase, short c 83.6 8.4 0.00029 34.6 10.8 83 41-131 46-133 (291)
437 2hq1_A Glucose/ribitol dehydro 83.4 2.6 9E-05 36.4 7.0 30 42-71 5-34 (247)
438 3pqe_A L-LDH, L-lactate dehydr 83.4 1.4 4.8E-05 41.3 5.5 83 41-129 4-119 (326)
439 4dib_A GAPDH, glyceraldehyde 3 83.4 1.3 4.3E-05 42.1 5.2 90 42-132 4-124 (345)
440 2zqz_A L-LDH, L-lactate dehydr 82.9 3.6 0.00012 38.4 8.2 39 36-76 3-43 (326)
441 3v8b_A Putative dehydrogenase, 82.8 2.8 9.7E-05 37.7 7.2 102 16-133 8-114 (283)
442 3vtz_A Glucose 1-dehydrogenase 82.8 2.3 7.8E-05 38.0 6.5 79 39-134 11-91 (269)
443 1mld_A Malate dehydrogenase; o 82.7 3.6 0.00012 38.1 8.0 86 43-131 1-116 (314)
444 3n58_A Adenosylhomocysteinase; 82.7 1.5 5.3E-05 43.1 5.6 65 41-110 246-313 (464)
445 3r1i_A Short-chain type dehydr 82.5 2.6 8.8E-05 37.9 6.8 91 36-134 26-119 (276)
446 1sby_A Alcohol dehydrogenase; 82.2 2.6 8.8E-05 36.9 6.6 82 42-134 5-94 (254)
447 3v2h_A D-beta-hydroxybutyrate 81.9 1.7 5.9E-05 39.1 5.4 85 42-134 25-114 (281)
448 4ffl_A PYLC; amino acid, biosy 81.5 3.5 0.00012 38.3 7.6 80 43-124 2-88 (363)
449 2tmg_A Protein (glutamate dehy 81.3 3 0.0001 40.5 7.1 85 40-128 207-312 (415)
450 2ekp_A 2-deoxy-D-gluconate 3-d 81.2 4.7 0.00016 34.9 7.9 33 43-76 3-35 (239)
451 3rui_A Ubiquitin-like modifier 80.8 4.4 0.00015 38.3 7.9 36 41-77 33-68 (340)
452 3tjr_A Short chain dehydrogena 80.8 4.2 0.00014 36.9 7.7 84 41-134 30-118 (301)
453 1tt5_A APPBP1, amyloid protein 80.7 2.2 7.5E-05 42.8 6.1 36 41-77 31-66 (531)
454 3ek2_A Enoyl-(acyl-carrier-pro 80.7 4.4 0.00015 35.5 7.5 85 40-134 12-102 (271)
455 4e3z_A Putative oxidoreductase 80.5 3.4 0.00012 36.7 6.8 84 42-134 26-114 (272)
456 1bgv_A Glutamate dehydrogenase 80.4 2.5 8.5E-05 41.5 6.2 86 41-128 229-343 (449)
457 3g79_A NDP-N-acetyl-D-galactos 80.1 4.7 0.00016 39.8 8.2 67 41-112 352-427 (478)
458 2eez_A Alanine dehydrogenase; 80.0 0.84 2.9E-05 43.3 2.7 34 42-77 166-199 (369)
459 3awd_A GOX2181, putative polyo 80.0 1.7 5.8E-05 38.0 4.5 34 41-75 12-45 (260)
460 1xq1_A Putative tropinone redu 79.9 4.8 0.00017 35.3 7.6 34 41-75 13-46 (266)
461 1npy_A Hypothetical shikimate 79.9 1.3 4.4E-05 40.4 3.8 104 42-155 119-233 (271)
462 3d0o_A L-LDH 1, L-lactate dehy 79.8 4.4 0.00015 37.5 7.5 87 41-131 5-122 (317)
463 4b7c_A Probable oxidoreductase 79.8 11 0.00036 34.5 10.2 79 41-133 149-227 (336)
464 3viv_A 441AA long hypothetical 79.7 2.9 9.8E-05 37.3 5.9 51 224-275 28-82 (230)
465 3ak4_A NADH-dependent quinucli 79.7 4.1 0.00014 35.9 7.0 80 41-133 11-95 (263)
466 3vot_A L-amino acid ligase, BL 79.7 13 0.00046 35.1 11.1 83 40-125 3-100 (425)
467 4egf_A L-xylulose reductase; s 79.6 2.6 9.1E-05 37.4 5.8 91 34-133 12-107 (266)
468 1o6z_A MDH, malate dehydrogena 79.6 1.8 6.3E-05 39.8 4.8 84 43-131 1-118 (303)
469 3bfp_A Acetyltransferase; LEFT 79.5 2.9 0.0001 35.6 5.7 69 43-125 4-73 (194)
470 3nrc_A Enoyl-[acyl-carrier-pro 79.5 4.6 0.00016 36.1 7.3 83 41-134 25-113 (280)
471 3gem_A Short chain dehydrogena 79.5 2 6.9E-05 38.2 4.9 80 41-133 26-108 (260)
472 4f6l_B AUSA reductase domain p 79.3 0.67 2.3E-05 45.5 1.8 33 41-73 149-181 (508)
473 2d4a_B Malate dehydrogenase; a 79.3 2.3 8E-05 39.3 5.4 82 44-130 1-114 (308)
474 3kvo_A Hydroxysteroid dehydrog 79.2 4.8 0.00017 37.6 7.7 89 41-133 44-138 (346)
475 3tpc_A Short chain alcohol deh 78.9 4.8 0.00017 35.3 7.2 82 42-134 7-91 (257)
476 2b4r_O Glyceraldehyde-3-phosph 78.9 3.1 0.00011 39.4 6.1 88 41-129 10-129 (345)
477 3egc_A Putative ribose operon 78.8 31 0.0011 30.0 12.7 75 180-261 125-206 (291)
478 3ngx_A Bifunctional protein fo 78.8 4 0.00014 37.4 6.7 56 41-110 149-204 (276)
479 4e2x_A TCAB9; kijanose, tetron 78.7 1.2 4.2E-05 42.3 3.4 83 41-127 318-407 (416)
480 2q2v_A Beta-D-hydroxybutyrate 78.7 2.1 7.3E-05 37.6 4.8 80 42-133 4-88 (255)
481 4a26_A Putative C-1-tetrahydro 78.5 4.2 0.00014 37.8 6.8 56 41-110 164-221 (300)
482 2o23_A HADH2 protein; HSD17B10 78.5 3.7 0.00013 35.8 6.3 82 41-133 11-95 (265)
483 4iin_A 3-ketoacyl-acyl carrier 78.4 1.8 6.2E-05 38.5 4.2 85 41-134 28-117 (271)
484 3jyo_A Quinate/shikimate dehyd 78.4 1.4 4.8E-05 40.4 3.5 68 40-111 125-206 (283)
485 1lnq_A MTHK channels, potassiu 78.3 1.5 5.2E-05 40.5 3.8 78 43-125 116-204 (336)
486 1sny_A Sniffer CG10964-PA; alp 78.2 2.6 8.9E-05 37.0 5.2 84 41-134 20-112 (267)
487 3m1a_A Putative dehydrogenase; 78.2 5.1 0.00017 35.5 7.2 79 42-133 5-88 (281)
488 3p7m_A Malate dehydrogenase; p 78.2 4.3 0.00015 37.8 6.9 85 42-131 5-121 (321)
489 3qwd_A ATP-dependent CLP prote 78.1 2.4 8.1E-05 37.1 4.8 65 210-275 29-97 (203)
490 3pid_A UDP-glucose 6-dehydroge 78.0 1.3 4.6E-05 43.2 3.4 69 42-113 332-409 (432)
491 3gvi_A Malate dehydrogenase; N 77.7 5.8 0.0002 37.0 7.6 86 41-131 6-123 (324)
492 3ftp_A 3-oxoacyl-[acyl-carrier 77.7 2.4 8.2E-05 37.9 4.9 85 42-134 28-115 (270)
493 3aog_A Glutamate dehydrogenase 77.6 2.1 7E-05 42.0 4.6 35 40-75 233-267 (440)
494 3phh_A Shikimate dehydrogenase 77.5 1.5 5.1E-05 40.1 3.4 102 42-155 118-228 (269)
495 3qiv_A Short-chain dehydrogena 77.4 8.2 0.00028 33.5 8.2 84 41-134 8-96 (253)
496 3sc4_A Short chain dehydrogena 77.3 3.5 0.00012 37.0 5.9 87 42-133 9-102 (285)
497 2dtx_A Glucose 1-dehydrogenase 77.2 5.6 0.00019 35.2 7.2 73 42-133 8-83 (264)
498 3d7l_A LIN1944 protein; APC893 77.1 1.8 6.3E-05 36.3 3.7 32 43-76 4-35 (202)
499 1yb1_A 17-beta-hydroxysteroid 76.9 2.3 7.9E-05 37.8 4.5 84 42-134 31-118 (272)
500 3l77_A Short-chain alcohol deh 76.8 3.7 0.00013 35.3 5.7 83 43-134 3-90 (235)
No 1
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=100.00 E-value=2.3e-70 Score=520.94 Aligned_cols=300 Identities=69% Similarity=1.137 Sum_probs=271.2
Q ss_pred CCCCCCCCcccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEE
Q 020101 26 SFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAI 105 (331)
Q Consensus 26 ~~~~~~~~l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii 105 (331)
+|+++. +..+|.|+++. +|+|+||++|+.++++++++||+++++|||+..|+++.|+|+|++++|+++++++|++++
T Consensus 1 ~~~~~~--~~~l~~~~sia-VV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI 77 (305)
T 2fp4_A 1 SYTASR--KHLYVDKNTKV-ICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVI 77 (305)
T ss_dssp CTGGGG--GGGCCCTTCEE-EEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEE
T ss_pred CchhhH--HHHHhCCCcEE-EEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEE
Confidence 366664 66677776643 334999999999999999999998889999976668999999999999998667999999
Q ss_pred ecChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccC-CcEEEccCCCCcccCCCcccccCCCCCCCCCCEE
Q 020101 106 YVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQS-KTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIG 184 (331)
Q Consensus 106 ~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~-gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~va 184 (331)
++|++.+++++++|+++|++.+|+|++|+++++++++.+.+ +++ |++++||||+|+++|.....+++|...+++|+||
T Consensus 78 ~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a-~~~~gi~liGPnc~Gii~p~~~~~~~~~~~~~~~G~va 156 (305)
T 2fp4_A 78 YVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRL-LRQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIG 156 (305)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHH-TTCSSCEEECSSSCEEEETTTEEEESSCGGGCCEEEEE
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHH-HhcCCcEEEeCCCCeEecccccceeeccccCCCCCCEE
Confidence 99999999999999999999999999999988888888888 888 9999999999999998433456666667899999
Q ss_pred EEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC---
Q 020101 185 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG--- 261 (331)
Q Consensus 185 lisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r--- 261 (331)
+|||||+++.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|+.+.++++|+++++
T Consensus 157 ~vSqSG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E~~g~~e~~~~~f~~~~~~~~ 236 (305)
T 2fp4_A 157 IVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGP 236 (305)
T ss_dssp EEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSCST
T ss_pred EEecchHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEecCCchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999877999999999999999999999999999998899999999876
Q ss_pred CCCCEEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHHhcCC
Q 020101 262 TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFKQRGL 329 (331)
Q Consensus 262 ~~KPVvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~~~~~~ 329 (331)
++||||+||+||+++.|+++||||++++...|++++++++|||+|+++++|++||+++++++|+..++
T Consensus 237 ~~KPVv~~k~G~s~~~g~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~~~~ 304 (305)
T 2fp4_A 237 KSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEKRKM 304 (305)
T ss_dssp TCCCEEEEEECTTCCTTCCCSSTTCCCBTTBCCHHHHHHHHHHTTCEECSSTTCHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEecCCccccccccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHHHhccC
Confidence 59999999999999547779999999976678999999999999999999999999999999987654
No 2
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=100.00 E-value=1.6e-70 Score=518.17 Aligned_cols=286 Identities=53% Similarity=0.890 Sum_probs=249.2
Q ss_pred ccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 37 ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
+|.++.++|+|+|+||++|+.++++++++||+++++|||+..|+++.|+|+|++++|+++++++|++++|+|++.+++++
T Consensus 2 ~~~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~ 81 (288)
T 1oi7_A 2 ILVNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAA 81 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHH
T ss_pred eecCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 56688899999999999999999999999999888999998667899999999999999866799999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEEEecChHHHHHH
Q 020101 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEA 196 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~valisQSG~~~~~~ 196 (331)
++|+++|++.+|++|+||++++.+++.+.+ ++++++++||||+|+++|.....+++|...+++|+||+|||||+++.++
T Consensus 82 ~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a-~~~gi~vigPNc~Gii~~~~~~~~~~~~~~~~~G~va~vsqSG~l~~~~ 160 (288)
T 1oi7_A 82 LEAAHAGIPLIVLITEGIPTLDMVRAVEEI-KALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEA 160 (288)
T ss_dssp HHHHHTTCSEEEECCSCCCHHHHHHHHHHH-HHHTCEEEESSSCEEEETTTEEEESSCGGGCCEEEEEEEESCHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEeCCCCeEEcCCCceeEEcccCCCCCCCEEEEECCHHHHHHH
Confidence 999999999989999999999888998888 7899999999999999998333344555567899999999999999999
Q ss_pred HHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEeCCCCC
Q 020101 197 VFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAP 276 (331)
Q Consensus 197 ~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvv~k~Grs~~ 276 (331)
++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|+++.++++|+++ +++||||+||+||+++
T Consensus 161 ~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~-~~~KPVv~~k~G~~~~ 239 (288)
T 1oi7_A 161 AAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD-HMKKPVVGFIGGRSAP 239 (288)
T ss_dssp HHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH-HCCSCEEEEESCC---
T ss_pred HHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-cCCCCEEEEEecCCCC
Confidence 999999999999999999998778999999999999999999999999999888889999987 6799999999999995
Q ss_pred CCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHH
Q 020101 277 PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVF 324 (331)
Q Consensus 277 ~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~ 324 (331)
.++++||||++++...|++++++++|||+|+++++|++||+++++++|
T Consensus 240 ~~~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 240 KGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp ---------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred ccccCcchhhcccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 477799999999766789999999999999999999999999999876
No 3
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=100.00 E-value=2.2e-70 Score=519.44 Aligned_cols=290 Identities=52% Similarity=0.898 Sum_probs=247.0
Q ss_pred cccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCC-CCEEEEecChhhH
Q 020101 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETK-ANASAIYVPPPFA 112 (331)
Q Consensus 34 l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~-iDlaii~vp~~~~ 112 (331)
++.+| ++.++|+|+|+||++|+.++++++++||+++++|||+..|+++.|+|+|+|++|++++++ +|++++|+|++.+
T Consensus 6 ~~~l~-~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~ 84 (297)
T 2yv2_A 6 MAVLV-DSETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAPFA 84 (297)
T ss_dssp ---CC-STTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGGGH
T ss_pred hhHhh-CCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHHHH
Confidence 44555 456677888999999999999999999998889999976678999999999999997544 9999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEEEecChHH
Q 020101 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTL 192 (331)
Q Consensus 113 ~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~valisQSG~~ 192 (331)
++++++|+++|++.+|++|+||++++.+++.+++ +++|++++||||+|+++|.....+++|...+++|+||+|||||++
T Consensus 85 ~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A-~~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSqSG~l 163 (297)
T 2yv2_A 85 PDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYA-RQKGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTL 163 (297)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHH-HHHTCEEECSSSCEEEETTTEEEESCCGGGCCEEEEEEEESCHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEcCCCCeeEcccccceeecccCCCCCCCEEEEECCHHH
Confidence 9999999999999889999999999888999988 789999999999999999843344455556789999999999999
Q ss_pred HHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEeC
Q 020101 193 TYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAG 272 (331)
Q Consensus 193 ~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvv~k~G 272 (331)
+.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|+++.++++|+++.+++||||+||+|
T Consensus 164 ~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~~~~~KPVv~~k~G 243 (297)
T 2yv2_A 164 TYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKGEFTKPVIAYIAG 243 (297)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHTTSCCSCEEEEESC
T ss_pred HHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhccCCCCEEEEEeC
Confidence 99999999999999999999999987788999999999999999999999999999888999999987789999999999
Q ss_pred CCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHH
Q 020101 273 LTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFK 325 (331)
Q Consensus 273 rs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~~ 325 (331)
|+++.++++||||++++.+.|++++++++|||+|+++++|++||+++++++|+
T Consensus 244 ~s~~~~~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 296 (297)
T 2yv2_A 244 RTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296 (297)
T ss_dssp CC------------------CSHHHHHHHHHTTTCEEESSGGGHHHHHHHHC-
T ss_pred CCCccccccCCccccccCCCCCHHHHHHHHHHcCCeEeCCHHHHHHHHHHHhh
Confidence 99954777999999997667899999999999999999999999999998763
No 4
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=7.6e-70 Score=515.00 Aligned_cols=288 Identities=49% Similarity=0.838 Sum_probs=245.8
Q ss_pred cccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 34 l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
|..+|.| .++++|+|+||++|+.++++++++||+++++|||+..++++.|+|+|++++|+++++++|++++|+|++.++
T Consensus 6 l~~l~~~-~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~ 84 (294)
T 2yv1_A 6 KMILLDE-NTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAK 84 (294)
T ss_dssp -CCSSCT-TCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHH
T ss_pred HHHHhCC-CCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHHHH
Confidence 6677755 456778899999999999999999999888999997657899999999999999855799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEEEecChHHH
Q 020101 114 AAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLT 193 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~valisQSG~~~ 193 (331)
+++++|+++|++.+|++|+||++++.+++.+++ +++|++++||||+|+++|.....+++|...+++|+||+|||||+++
T Consensus 85 ~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A-~~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSqSG~l~ 163 (294)
T 2yv1_A 85 DAVFEAIDAGIELIVVITEHIPVHDTMEFVNYA-EDVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLT 163 (294)
T ss_dssp HHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHH-HHHTCEEECSSCCEEEETTTEEEECCCGGGCCEEEEEEEESCSHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEcCCCceeeccCcceeeecccCCCCCCCEEEEECCHHHH
Confidence 999999999999889999999999988999988 8899999999999999998433445555567899999999999999
Q ss_pred HHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEeCC
Q 020101 194 YEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGL 273 (331)
Q Consensus 194 ~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvv~k~Gr 273 (331)
.++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++ ++||||+||+||
T Consensus 164 ~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~~~~~~~--~~KPVv~~k~G~ 241 (294)
T 2yv1_A 164 YEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK--MKKPVIGYIAGQ 241 (294)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEESSSSHHHHHHHHHTT--CSSCEEEEEECC
T ss_pred HHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh--CCCCEEEEEecC
Confidence 999999999999999999999998778999999999999999999999999999888888888876 689999999999
Q ss_pred CCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHH
Q 020101 274 TAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFK 325 (331)
Q Consensus 274 s~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~~ 325 (331)
+++.++++||||++++...|++++++++|||+|+++++|++||+++++++|+
T Consensus 242 ~~~~g~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~~ 293 (294)
T 2yv1_A 242 SAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILG 293 (294)
T ss_dssp -------------------CCHHHHHHHHHHHTCEECSSTTHHHHHHHHHHC
T ss_pred CCCccccCCchhhhccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHhc
Confidence 9954777999999997667899999999999999999999999999998774
No 5
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=6.1e-69 Score=507.46 Aligned_cols=286 Identities=66% Similarity=1.088 Sum_probs=264.7
Q ss_pred ccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 37 ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
+|.++.++|+|+|+||++|+.++++++++|++++++|||+..|+++.|+|+|++++|+++++++|++++|+|++.+++++
T Consensus 2 ~~~~~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~ 81 (288)
T 2nu8_A 2 ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSI 81 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHH
T ss_pred eecCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 56788899999999999999999999999999999999986456789999999999999755799999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEEEecChHHHHHH
Q 020101 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEA 196 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~valisQSG~~~~~~ 196 (331)
++|+++|++.+|++|+|+++++.+++.+.+ +++|++++||||+|++||.....+++|...+++|+||+|||||+++.++
T Consensus 82 ~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A-~~~gv~liGPNc~Gi~~p~~~~~~~~~~~~~~~G~i~~vsqSG~l~~~~ 160 (288)
T 2nu8_A 82 LEAIDAGIKLIITITEGIPTLDMLTVKVKL-DEAGVRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEA 160 (288)
T ss_dssp HHHHHTTCSEEEECCCCCCHHHHHHHHHHH-HHHTCEEECSSCCEEEETTTEEEESSCTTSCCEEEEEEEESCHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEecCCcceecCCcceeEecccCCCCCCCEEEEECcHHHHHHH
Confidence 999999999989999999999888999888 8899999999999999998333446676668899999999999999999
Q ss_pred HHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhCCCCCEEEEEeCCCCC
Q 020101 197 VFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAP 276 (331)
Q Consensus 197 ~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r~~KPVvv~k~Grs~~ 276 (331)
++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|+||+|++|++++++++|+++ +++||||+||+||+++
T Consensus 161 ~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~-~~~KPVv~~k~G~~~~ 239 (288)
T 2nu8_A 161 VKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE-HVTKPVVGYIAGVTAP 239 (288)
T ss_dssp HHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH-HCCSCEEEEEECTTCC
T ss_pred HHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-cCCCCEEEEEeCCCCc
Confidence 999999999999999999998779999999999999999999999999999999999999998 6799999999999995
Q ss_pred CCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHH
Q 020101 277 PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVF 324 (331)
Q Consensus 277 ~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~ 324 (331)
.|+++||||++++...|++++++++|||+|+++++|++||+++++.+|
T Consensus 240 ~g~~~~Htga~~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 240 KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp TTCCCSSTTCCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC
T ss_pred ccccccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 477799999999777789999999999999999999999999999765
No 6
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00 E-value=3.8e-63 Score=475.09 Aligned_cols=283 Identities=29% Similarity=0.480 Sum_probs=232.7
Q ss_pred ccCCCCeEEEEEcCCCCCCcHHHHHHHHc-------CCeEEEEeCCCCCC--cee------cCcccccCHHHhhhcC-CC
Q 020101 37 VFVDKNTRVICQGITGKNGTFHTEQAIEY-------GTKMVGGVTPKKGG--TEH------LGLPVFNTVAEAKAET-KA 100 (331)
Q Consensus 37 ll~~k~~~VaIvGasgk~G~~~~~~l~~~-------g~~iv~~VnP~~~g--~~i------~G~p~y~sl~dl~~~~-~i 100 (331)
.|.++++||+|.|++|| ..+++.++ +.+++++|||+..| +++ .|+|+|+|++|+++++ ++
T Consensus 5 ~l~~~~tkviV~G~~Gk----~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p~~ 80 (334)
T 3mwd_B 5 TLFSRHTKAIVWGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEV 80 (334)
T ss_dssp CCCCTTCCEEEESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTC
T ss_pred cccCCCCeEEEECCchH----HHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccCCceeeCCHHHHhhcCCCC
Confidence 45578899999999876 34555554 47799999999864 444 3899999999998764 58
Q ss_pred CEEEEecChhhHHHHHHHHHH-cCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccc--------
Q 020101 101 NASAIYVPPPFAAAAILEAME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIG-------- 171 (331)
Q Consensus 101 Dlaii~vp~~~~~~~v~~~~~-~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~-------- 171 (331)
|++|+|+|++.+.+.+.++++ +|++.++++|+||+|++++++.+++ +++|+|++||||+|++||..+.++
T Consensus 81 DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a-~~~g~rliGPNc~Gii~p~~~~ig~~~~~~~a 159 (334)
T 3mwd_B 81 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKA-DQKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 159 (334)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHH-HHHTCEEECSSCCCEEETTTEECTTTTCSHHH
T ss_pred cEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HHcCCEEEccCCccccCcchhhcccccccccc
Confidence 999999999999877766666 9999999999999999988999888 899999999999999999732222
Q ss_pred cCCCCCCCCCCEEEEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHH
Q 020101 172 IMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEE 251 (331)
Q Consensus 172 ~~~~~~~~~G~valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~ 251 (331)
.+|...+++|+||+|||||+++.++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+|++|+||+|..|. .
T Consensus 160 ~~~~~~~~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~--~ 237 (334)
T 3mwd_B 160 ILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGT--E 237 (334)
T ss_dssp HHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSS--H
T ss_pred cccccCCCCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCCh--H
Confidence 23445689999999999999999999999999999999999999955599999999999999999999999887664 4
Q ss_pred HHHHHHHHhC---CCCCEEEEEeCCCCCC---CCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHH
Q 020101 252 DAAALIKESG---TEKPIVAFIAGLTAPP---GRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFK 325 (331)
Q Consensus 252 ~~~~f~~a~r---~~KPVvv~k~Grs~~~---g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~~ 325 (331)
+ ++|++++| ++||||+||+||+++. ++++|||||+++.+.|++++++++|||+|+++++|++||+++++++|+
T Consensus 238 e-~~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 316 (334)
T 3mwd_B 238 E-YKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYE 316 (334)
T ss_dssp H-HHHHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHH
T ss_pred H-HHHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHH
Confidence 5 78888775 8999999999999972 445899999996555666699999999999999999999999999987
Q ss_pred hc
Q 020101 326 QR 327 (331)
Q Consensus 326 ~~ 327 (331)
+|
T Consensus 317 ~l 318 (334)
T 3mwd_B 317 DL 318 (334)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 7
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=1.3e-61 Score=483.93 Aligned_cols=270 Identities=21% Similarity=0.335 Sum_probs=230.3
Q ss_pred CcccccCCCCeEEEEEcCCCCC---CcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 33 PAPAVFVDKNTRVICQGITGKN---GTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 33 ~l~~ll~~k~~~VaIvGasgk~---G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
+|+.+|.|++ |+|||+|+++ |+.++++++++|...+++|||+. +++.|+|||+|++|+|+ .+|++++++|+
T Consensus 1 ~l~~l~~p~s--iAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~--~~i~G~~~y~sl~~lp~--~~Dlavi~vp~ 74 (457)
T 2csu_A 1 MLDYFFNPKG--IAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE--EEVQGVKAYKSVKDIPD--EIDLAIIVVPK 74 (457)
T ss_dssp CCCTTTSCSE--EEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC--SEETTEECBSSTTSCSS--CCSEEEECSCH
T ss_pred ChhHhcCCCe--EEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCC--CeECCEeccCCHHHcCC--CCCEEEEecCH
Confidence 3788998766 5679999765 67788899888622445999996 89999999999999998 79999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhH------HHHHHHHHhccCCcEEEccCCCCcccCC-CcccccCCCCCCCCCC
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALNNQSKTRLVGPNCPGVIKPG-ECKIGIMPGYIHKPGR 182 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~------~~~l~~~a~~~~gi~viGPnc~Gi~~p~-~~~~~~~~~~~~~~G~ 182 (331)
+.+++++++|+++|+|.+|++++||+|.+ .+++.+++ +++|++++||||+|+++|. +++++|.|.. ++ |+
T Consensus 75 ~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a-~~~g~~viGPnc~Gv~~~~~~~~~~~~~~~-~~-G~ 151 (457)
T 2csu_A 75 RFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIA-HKYGMRIIGPNCVGIMNTHVDLNATFITVA-KK-GN 151 (457)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHH-HHHTCEEECSSCCEEEEGGGTEEEESSCCC-EE-CS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHH-HHcCCEEEcCCcceEEccCCCceeeecCCC-CC-CC
Confidence 99999999999999999999999998732 45777777 8999999999999999999 7999998764 34 99
Q ss_pred EEEEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-
Q 020101 183 IGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG- 261 (331)
Q Consensus 183 valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r- 261 (331)
||+|||||+++.++++|+.++|+|||++||+||++ |+++.|+|+||.+||+|++|++|+|++ .|+++|++++|
T Consensus 152 v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~~~--~~~~~d~l~~~~~D~~t~~I~l~~E~i----~~~~~f~~~a~~ 225 (457)
T 2csu_A 152 VAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIEGV----RNGKKFMEVAKR 225 (457)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEESCC----SCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCCcC--CCCHHHHHHHHhcCCCCCEEEEEEecC----CCHHHHHHHHHH
Confidence 99999999999999999999999999999999997 999999999999999999999999985 47899999887
Q ss_pred --CCCCEEEEEeCCCCCCCCC--CCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHH
Q 020101 262 --TEKPIVAFIAGLTAPPGRR--MGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLE 322 (331)
Q Consensus 262 --~~KPVvv~k~Grs~~~g~~--~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a 322 (331)
++||||++|+||+++ |++ +||||+++ |++++++++|||+|++++++++|+.++.+.
T Consensus 226 ~~~~KPVv~~k~G~~~~-g~~aa~~Htgala----g~~~~~~AafRqaGv~~v~~~~El~~~~~~ 285 (457)
T 2csu_A 226 VTKKKPIIALKAGKSES-GARAASSHTGSLA----GSWKIYEAAFKQSGVLVANTIDEMLSMARA 285 (457)
T ss_dssp HHHHSCEEEEECC-----------------------CHHHHHHHHHHTTCEEESSHHHHHHHHTT
T ss_pred hcCCCCEEEEEcCCCcc-ccchhhcccCccC----CcHHHHHHHHHhCCCeEECCHHHHHHHHHH
Confidence 789999999999999 776 79999999 899999999999999999999999998775
No 8
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-59 Score=488.17 Aligned_cols=286 Identities=30% Similarity=0.478 Sum_probs=237.9
Q ss_pred ccCCCCeEEEEEcCCCCCCcHHHHHHHHcC-------CeEEEEeCCCCCC--cee------cCcccccCHHHhhhcC-CC
Q 020101 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKGG--TEH------LGLPVFNTVAEAKAET-KA 100 (331)
Q Consensus 37 ll~~k~~~VaIvGasgk~G~~~~~~l~~~g-------~~iv~~VnP~~~g--~~i------~G~p~y~sl~dl~~~~-~i 100 (331)
.|.++++||+|.|++|+ +.++++++| .+++++|||...| .++ .|+|||+|++|+++++ ++
T Consensus 491 ~l~~~~trviV~G~tg~----~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~y~sv~ea~~~~p~~ 566 (829)
T 3pff_A 491 TLFSRHTKAIVWGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEV 566 (829)
T ss_dssp CCCCTTCCEEEESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTC
T ss_pred eeecCCCeEEEECCcHH----HHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCcccCCcHHHHhhccCCC
Confidence 45588899999999865 677777765 5699999999864 233 4799999999998763 58
Q ss_pred CEEEEecChhhHHHHHHHHHH-cCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccc--------
Q 020101 101 NASAIYVPPPFAAAAILEAME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIG-------- 171 (331)
Q Consensus 101 Dlaii~vp~~~~~~~v~~~~~-~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~-------- 171 (331)
|++|+++|++.+++++++|++ +|++.++++|+||+|.++++|.++| +++|+|++||||+|+++|....++
T Consensus 567 DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A-~~~g~rliGPNc~Gii~p~~~~ig~~~g~lna 645 (829)
T 3pff_A 567 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKA-DQKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 645 (829)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHH-HHHTCEEECSSCCCEEETTTEECTTTTCSHHH
T ss_pred cEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHH-HHcCCEEEcCCCcccCcccccccccccccccc
Confidence 999999999999999999999 9999999999999999888999988 899999999999999999843333
Q ss_pred cCCCCCCCCCCEEEEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHH
Q 020101 172 IMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEE 251 (331)
Q Consensus 172 ~~~~~~~~~G~valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~ 251 (331)
++|...+++|+||+|||||+++.++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+|++|+||+|..|+.+.
T Consensus 646 ~~~~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~Ei~g~~f~ 725 (829)
T 3pff_A 646 ILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 725 (829)
T ss_dssp HHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHH
T ss_pred ccccccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEEecCchHHH
Confidence 34555689999999999999999999999999999999999999966699999999999999999999999996555444
Q ss_pred HHHHHHHHhCCCCCEEEEEeCCCCCC---CCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHHHHHhc
Q 020101 252 DAAALIKESGTEKPIVAFIAGLTAPP---GRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFKQR 327 (331)
Q Consensus 252 ~~~~f~~a~r~~KPVvv~k~Grs~~~---g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a~~~~~ 327 (331)
++.+++++.+++||||+||+|||++. ++++|||||+++++.|++++++++|||+|+++++|++||+++++.+|++|
T Consensus 726 ~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~~~~~~~~l 804 (829)
T 3pff_A 726 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL 804 (829)
T ss_dssp HHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHH
Confidence 44444433247899999999999983 45689999999666667779999999999999999999999999998754
No 9
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=100.00 E-value=4.7e-46 Score=371.62 Aligned_cols=210 Identities=21% Similarity=0.318 Sum_probs=185.3
Q ss_pred cCccccc---CHHHhhhcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCC
Q 020101 83 LGLPVFN---TVAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC 159 (331)
Q Consensus 83 ~G~p~y~---sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc 159 (331)
.++|+|+ ++.++++ .+|++||++|++.+++++++|+++|++ ++++|+||+.++++++.+.| +++|+|++||||
T Consensus 19 ~~~Pv~~~~~~~~~~p~--~~DlavI~vPa~~v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~~~A-~~~g~rliGPNc 94 (480)
T 3dmy_A 19 QALTQVRRWDSACQKLP--DANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRA-REKGLLVMGPDC 94 (480)
T ss_dssp -CCEEESSHHHHHHHST--TCCEEEECSCHHHHHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHH-HHTTCCEECSSC
T ss_pred CCCcccchHHHHHhcCC--CCCEEEEecCHHHHHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHHH-HHcCCEEEecCc
Confidence 3566655 4555565 799999999999999999999999999 78899999988888899888 899999999999
Q ss_pred CCcccCCCcccccCCCCCCCCCCEEEEecChHHHHHHHHHHHhCCCCceEEEecCCCC----CCCCCHHHHHHHhhcCCC
Q 020101 160 PGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDP----FNGTNFVDCVTKFIADPQ 235 (331)
Q Consensus 160 ~Gi~~p~~~~~~~~~~~~~~~G~valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~----~~~v~~~d~l~~l~~Dp~ 235 (331)
|++++.+++++|.+. +++|+||+|||||+++.++++|+.++|+|||++||+||+. +.|+++.|+|+||.+||+
T Consensus 95 -G~~~~~~~~~~f~~~--~~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~ 171 (480)
T 3dmy_A 95 -GTSMIAGTPLAFANV--MPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEK 171 (480)
T ss_dssp -CEEEETTEEEESCCC--CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTT
T ss_pred -cccccCCccccccCC--CCCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCC
Confidence 888877677777653 5699999999999999999999999999999999999991 149999999999999999
Q ss_pred ccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHh
Q 020101 236 TEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPA 314 (331)
Q Consensus 236 T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~ 314 (331)
|++|++|+|++. +...++|++++| ++||||++|+||++. | |||+|+++++|++
T Consensus 172 T~~I~ly~E~~~--e~~~~~f~~~ar~~~KPVV~~k~Grs~~----------------g--------~r~~Gvirv~~~~ 225 (480)
T 3dmy_A 172 SEVLAFVSKPPA--EAVRLKIVNAMKATGKPTVALFLGYTPA----------------V--------ARDENVWFASSLD 225 (480)
T ss_dssp CCEEEEEESCCC--HHHHHHHHHHHHHHCSCEEEEETTCCCS----------------S--------SEETTEEEESSHH
T ss_pred CCEEEEEEecCC--cHHHHHHHHHHHhCCCCEEEEEeCCCCc----------------c--------cccCCEEEECCHH
Confidence 999999999842 334589999986 899999999999988 3 8999999999999
Q ss_pred HHHHHHHHHHH
Q 020101 315 KIGAAMLEVFK 325 (331)
Q Consensus 315 el~~~~~a~~~ 325 (331)
||+++++++..
T Consensus 226 el~~~a~~l~~ 236 (480)
T 3dmy_A 226 EAARLACLLSR 236 (480)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999997654
No 10
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.90 E-value=1.4e-24 Score=183.67 Aligned_cols=123 Identities=20% Similarity=0.267 Sum_probs=105.1
Q ss_pred ccccc-CCCCeEEEEEcCC---CCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 34 APAVF-VDKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 34 l~~ll-~~k~~~VaIvGas---gk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
|+.+| .|++ |+|||+| +++|+.++++|++.||+ +++|||+..++++.|+++|+|++|+++ ++|++++++|+
T Consensus 6 l~~ll~~p~~--vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vnp~~~~~~i~G~~~~~sl~el~~--~vDlavi~vp~ 80 (140)
T 1iuk_A 6 LRAYLSQAKT--IAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNPRFQGEELFGEEAVASLLDLKE--PVDILDVFRPP 80 (140)
T ss_dssp HHHHHHHCCE--EEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECGGGTTSEETTEECBSSGGGCCS--CCSEEEECSCH
T ss_pred HHHHHcCCCE--EEEECCCCCCCChHHHHHHHHHHCCCE-EEEeCCCcccCcCCCEEecCCHHHCCC--CCCEEEEEeCH
Confidence 78889 6655 6779999 45677888999999998 459999943489999999999999998 89999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~ 166 (331)
+.+++++++|.++|++.+|+ ++|+.+ +++.+.+ +++|++++||||+|+++|.
T Consensus 81 ~~~~~v~~~~~~~gi~~i~~-~~g~~~---~~~~~~a-~~~Gir~vgpnc~g~~~~~ 132 (140)
T 1iuk_A 81 SALMDHLPEVLALRPGLVWL-QSGIRH---PEFEKAL-KEAGIPVVADRCLMVEHKR 132 (140)
T ss_dssp HHHTTTHHHHHHHCCSCEEE-CTTCCC---HHHHHHH-HHTTCCEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEE-cCCcCH---HHHHHHH-HHcCCEEEcCCccceEChh
Confidence 99999999999999999775 667654 3455566 7899999999999999986
No 11
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.89 E-value=9e-24 Score=179.72 Aligned_cols=124 Identities=15% Similarity=0.201 Sum_probs=107.0
Q ss_pred CcccccC-CCCeEEEEEcCC---CCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecC
Q 020101 33 PAPAVFV-DKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 33 ~l~~ll~-~k~~~VaIvGas---gk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp 108 (331)
+|+.+|. |++ |+|||+| |++|+.++++|++.||++ ++|||+..|+++.|.++|+|++|+++ ++|++++++|
T Consensus 5 ~l~~ll~~p~~--IavIGas~~~g~~G~~~~~~L~~~G~~v-~~vnp~~~g~~i~G~~~~~sl~el~~--~~Dlvii~vp 79 (145)
T 2duw_A 5 DIAGILTSTRT--IALVGASDKPDRPSYRVMKYLLDQGYHV-IPVSPKVAGKTLLGQQGYATLADVPE--KVDMVDVFRN 79 (145)
T ss_dssp SHHHHHHHCCC--EEEESCCSCTTSHHHHHHHHHHHHTCCE-EEECSSSTTSEETTEECCSSTTTCSS--CCSEEECCSC
T ss_pred HHHHHHhCCCE--EEEECcCCCCCChHHHHHHHHHHCCCEE-EEeCCcccccccCCeeccCCHHHcCC--CCCEEEEEeC
Confidence 3889995 766 6779998 567788899999999985 49999986678999999999999997 7999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC
Q 020101 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~ 166 (331)
++.+++++++|+++|++.+|+.+..+ .+++.+.+ +++|++++||||+|+++|.
T Consensus 80 ~~~v~~v~~~~~~~g~~~i~i~~~~~----~~~l~~~a-~~~Gi~~igpnc~g~~~~~ 132 (145)
T 2duw_A 80 SEAAWGVAQEAIAIGAKTLWLQLGVI----NEQAAVLA-REAGLSVVMDRCPAIELPR 132 (145)
T ss_dssp STHHHHHHHHHHHHTCCEEECCTTCC----CHHHHHHH-HTTTCEEECSCCHHHHSTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCChH----HHHHHHHH-HHcCCEEEcCCeeeEEccc
Confidence 99999999999999999988765444 34555666 7999999999999999997
No 12
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.89 E-value=2.5e-23 Score=175.60 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=99.3
Q ss_pred cccCCCCeEEEEEcCC---CCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 36 AVFVDKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 36 ~ll~~k~~~VaIvGas---gk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
.+|.|+ +|+|||+| |++|+.+++++++.||++ ++|||+. +++.|.++|+|++|+++ ++|++++++|++.+
T Consensus 10 ~l~~p~--~IavIGaS~~~g~~G~~~~~~L~~~G~~V-~~vnp~~--~~i~G~~~~~s~~el~~--~vDlvii~vp~~~v 82 (138)
T 1y81_A 10 NSKEFR--KIALVGASKNPAKYGNIILKDLLSKGFEV-LPVNPNY--DEIEGLKCYRSVRELPK--DVDVIVFVVPPKVG 82 (138)
T ss_dssp ----CC--EEEEETCCSCTTSHHHHHHHHHHHTTCEE-EEECTTC--SEETTEECBSSGGGSCT--TCCEEEECSCHHHH
T ss_pred cccCCC--eEEEEeecCCCCCHHHHHHHHHHHCCCEE-EEeCCCC--CeECCeeecCCHHHhCC--CCCEEEEEeCHHHH
Confidence 466554 47789998 566778889999999985 4999997 78999999999999998 79999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC
Q 020101 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (331)
Q Consensus 113 ~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~ 166 (331)
++++++|+++|++.+|++++++ .+++.+.+ +++|++++||||+|+++|.
T Consensus 83 ~~v~~~~~~~g~~~i~~~~~~~----~~~l~~~a-~~~Gi~~igpnc~g~~~~~ 131 (138)
T 1y81_A 83 LQVAKEAVEAGFKKLWFQPGAE----SEEIRRFL-EKAGVEYSFGRCIMVETSN 131 (138)
T ss_dssp HHHHHHHHHTTCCEEEECTTSC----CHHHHHHH-HHHTCEEECSCCHHHHC--
T ss_pred HHHHHHHHHcCCCEEEEcCccH----HHHHHHHH-HHCCCEEEcCCcceEEccC
Confidence 9999999999999999877665 24556666 7889999999999999986
No 13
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=99.89 E-value=1.5e-23 Score=178.13 Aligned_cols=121 Identities=15% Similarity=0.217 Sum_probs=104.4
Q ss_pred cccccC-CCCeEEEEEcCC---CCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 34 APAVFV-DKNTRVICQGIT---GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 34 l~~ll~-~k~~~VaIvGas---gk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
|+.+|. |+ +|+|||+| +++|+.++++|++.||++ ++|||+. +++.|+++|++++|+++ ++|++++++|+
T Consensus 15 l~~ll~~p~--~iaVVGas~~~g~~G~~~~~~l~~~G~~v-~~Vnp~~--~~i~G~~~y~sl~~l~~--~vDlvvi~vp~ 87 (144)
T 2d59_A 15 IREILTRYK--KIALVGASPKPERDANIVMKYLLEHGYDV-YPVNPKY--EEVLGRKCYPSVLDIPD--KIEVVDLFVKP 87 (144)
T ss_dssp HHHHHHHCC--EEEEETCCSCTTSHHHHHHHHHHHTTCEE-EEECTTC--SEETTEECBSSGGGCSS--CCSEEEECSCH
T ss_pred HHHHHcCCC--EEEEEccCCCCCchHHHHHHHHHHCCCEE-EEECCCC--CeECCeeccCCHHHcCC--CCCEEEEEeCH
Confidence 888994 65 46789998 466778889999999985 5999997 78999999999999998 79999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG 166 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~ 166 (331)
+.+++++++|+++|++.+| +++|+.+ +++.+.+ +++|++++||||+|+++|.
T Consensus 88 ~~~~~vv~~~~~~gi~~i~-~~~g~~~---~~l~~~a-~~~Gi~vvGpnc~gv~~~~ 139 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAKVVW-FQYNTYN---REASKKA-DEAGLIIVANRCMMREHER 139 (144)
T ss_dssp HHHHHHHHHHHHHTCSEEE-ECTTCCC---HHHHHHH-HHTTCEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEE-ECCCchH---HHHHHHH-HHcCCEEEcCCchhhcchh
Confidence 9999999999999999976 6777753 3455666 7899999999999999874
No 14
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=99.88 E-value=3.3e-23 Score=171.45 Aligned_cols=109 Identities=17% Similarity=0.265 Sum_probs=94.6
Q ss_pred EEEEEcCCCCC---CcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHH
Q 020101 44 RVICQGITGKN---GTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 44 ~VaIvGasgk~---G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~ 120 (331)
+|+|||||.++ |+.++++|++.||+++ ||||+. +++.|.++|+|++|+|+ +|++++++|++.+++++++|.
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g~~V~-pVnP~~--~~i~G~~~y~sl~dlp~---vDlavi~~p~~~v~~~v~e~~ 79 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHGHEFI-PVGRKK--GEVLGKTIINERPVIEG---VDTVTLYINPQNQLSEYNYIL 79 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHTCCEE-EESSSC--SEETTEECBCSCCCCTT---CCEEEECSCHHHHGGGHHHHH
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCCCeEE-EECCCC--CcCCCeeccCChHHCCC---CCEEEEEeCHHHHHHHHHHHH
Confidence 46679999765 5567889999999876 999998 89999999999999985 899999999999999999999
Q ss_pred HcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCccc
Q 020101 121 EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIK 164 (331)
Q Consensus 121 ~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~ 164 (331)
++|+|.+| +++||.++ ++.+.| +++||+++| ||+|++.
T Consensus 80 ~~g~k~v~-~~~G~~~~---e~~~~a-~~~Girvv~-nC~gv~l 117 (122)
T 3ff4_A 80 SLKPKRVI-FNPGTENE---ELEEIL-SENGIEPVI-GCTLVML 117 (122)
T ss_dssp HHCCSEEE-ECTTCCCH---HHHHHH-HHTTCEEEE-SCHHHHH
T ss_pred hcCCCEEE-ECCCCChH---HHHHHH-HHcCCeEEC-CcCeEEe
Confidence 99999855 89999654 445556 789999996 9999875
No 15
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.47 E-value=1.5e-13 Score=128.90 Aligned_cols=116 Identities=12% Similarity=0.099 Sum_probs=96.0
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCC---CCce--------ecCcccccCHHHhhhcCCCCEEEEe
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK---GGTE--------HLGLPVFNTVAEAKAETKANASAIY 106 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~---~g~~--------i~G~p~y~sl~dl~~~~~iDlaii~ 106 (331)
.++++||+|+||+|+||+.+++.+.+. ++++++.++++. .|.+ ..|+|+|.+++++.. ++|++|+|
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~--~aDVvIDF 95 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS--NTEGILDF 95 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT--SCSEEEEC
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc--CCCEEEEc
Confidence 567899999999999999999998864 899998888753 2222 258899999999987 79999999
Q ss_pred cChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCC
Q 020101 107 VPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC 159 (331)
Q Consensus 107 vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc 159 (331)
++|+.+.+.++.|+++|++. |+.|+|+++++.++|.++| ++.+ .++.||.
T Consensus 96 T~p~a~~~~~~~~l~~Gv~v-ViGTTG~~~e~~~~L~~aa-~~~~-~~~a~N~ 145 (288)
T 3ijp_A 96 SQPQASVLYANYAAQKSLIH-IIGTTGFSKTEEAQIADFA-KYTT-IVKSGNM 145 (288)
T ss_dssp SCHHHHHHHHHHHHHHTCEE-EECCCCCCHHHHHHHHHHH-TTSE-EEECSCC
T ss_pred CCHHHHHHHHHHHHHcCCCE-EEECCCCCHHHHHHHHHHh-CcCC-EEEECCC
Confidence 99999999999999999997 5689999998888888887 5543 3788884
No 16
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.39 E-value=1.2e-12 Score=122.02 Aligned_cols=114 Identities=17% Similarity=0.270 Sum_probs=94.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCC---CCce-------ecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK---GGTE-------HLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~---~g~~-------i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
+.+||+|+||+|+||+.+++.+.+. ++++++.++++. .|.. ..|+++|.+++++.+ ++|++|+|++|
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~--~~DVVIDfT~p 83 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA--EADYLIDFTLP 83 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH--HCSEEEECSCH
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc--CCCEEEEcCCH
Confidence 3589999999999999999988875 789998888653 1211 127899999999987 69999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCC
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC 159 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc 159 (331)
+.+.+.++.|+++|++. |+.|+|+++++.++|.++| ++.+ .++.||.
T Consensus 84 ~a~~~~~~~al~~G~~v-VigTTG~s~~~~~~L~~aa-~~~~-vv~a~N~ 130 (272)
T 4f3y_A 84 EGTLVHLDAALRHDVKL-VIGTTGFSEPQKAQLRAAG-EKIA-LVFSANM 130 (272)
T ss_dssp HHHHHHHHHHHHHTCEE-EECCCCCCHHHHHHHHHHT-TTSE-EEECSCC
T ss_pred HHHHHHHHHHHHcCCCE-EEECCCCCHHHHHHHHHHh-ccCC-EEEECCC
Confidence 99999999999999997 5689999998888888877 5544 4778884
No 17
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.24 E-value=1.3e-11 Score=113.26 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=89.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAME 121 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~ 121 (331)
.+||+|+|+ |+||+.+.+.+.+.+.++++.+++.. ....|+++|.+++++. ++|++|+|++|+.+.+.++ ++
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~--~~~~gv~v~~dl~~l~---~~DVvIDft~p~a~~~~~~--l~ 74 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP--KATTPYQQYQHIADVK---GADVAIDFSNPNLLFPLLD--ED 74 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC--C--CCSCBCSCTTTCT---TCSEEEECSCHHHHHHHHT--SC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc--cccCCCceeCCHHHHh---CCCEEEEeCChHHHHHHHH--Hh
Confidence 478999999 99999999998886449998899876 4457999999999986 5899999999999999987 88
Q ss_pred cCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCC
Q 020101 122 AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC 159 (331)
Q Consensus 122 ~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc 159 (331)
+|++. |+.|+|+++++.++|.+++ ++.++ ++.||.
T Consensus 75 ~g~~v-VigTTG~s~e~~~~l~~aa-~~~~v-~~a~N~ 109 (243)
T 3qy9_A 75 FHLPL-VVATTGEKEKLLNKLDELS-QNMPV-FFSANM 109 (243)
T ss_dssp CCCCE-EECCCSSHHHHHHHHHHHT-TTSEE-EECSSC
T ss_pred cCCce-EeCCCCCCHHHHHHHHHHH-hcCCE-EEECCc
Confidence 99997 5689999988888888877 55443 778885
No 18
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.23 E-value=1.9e-11 Score=113.91 Aligned_cols=118 Identities=18% Similarity=0.239 Sum_probs=94.4
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHH-cCCeEEEEeCCCCC---Cce--------ecCcccccCHHHhhhcCCCCEEEEec
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKG---GTE--------HLGLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~-~g~~iv~~VnP~~~---g~~--------i~G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
.+.+||+|+|++|+||+.+.+.+.+ .++++++.+++... +.. ..+++++.+++++.. ++|++|+|+
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~DvVIDft 80 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFDVFIDFT 80 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCSEEEECS
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCCEEEEcC
Confidence 4668999999999999999998775 47888877776431 111 236778888988876 799999999
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccC-CCCc
Q 020101 108 PPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPN-CPGV 162 (331)
Q Consensus 108 p~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPn-c~Gi 162 (331)
+|+.+.+.++.|+++|++. ++.|+|+++++..+|.+.+ ++.+ .++.|| ++|+
T Consensus 81 ~p~~~~~~~~~a~~~G~~v-VigTtG~~~e~~~~L~~~a-~~~~-vv~a~N~siGv 133 (273)
T 1dih_A 81 RPEGTLNHLAFCRQHGKGM-VIGTTGFDEAGKQAIRDAA-ADIA-IVFAANFSVGV 133 (273)
T ss_dssp CHHHHHHHHHHHHHTTCEE-EECCCCCCHHHHHHHHHHT-TTSC-EEECSCCCHHH
T ss_pred ChHHHHHHHHHHHhCCCCE-EEECCCCCHHHHHHHHHhc-CCCC-EEEEecCcHHH
Confidence 9999999999999999996 6689999998888888776 5554 577888 4444
No 19
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=99.22 E-value=6.9e-12 Score=112.69 Aligned_cols=109 Identities=13% Similarity=0.171 Sum_probs=86.3
Q ss_pred CCCCCCCCC--CCccccc-CCCCeEEEEEcCCCCCCcHHHHHH--HHcCCeEEEEe--CCC-CCCc-eecCccccc--CH
Q 020101 23 QSRSFTTAP--PPAPAVF-VDKNTRVICQGITGKNGTFHTEQA--IEYGTKMVGGV--TPK-KGGT-EHLGLPVFN--TV 91 (331)
Q Consensus 23 ~~~~~~~~~--~~l~~ll-~~k~~~VaIvGasgk~G~~~~~~l--~~~g~~iv~~V--nP~-~~g~-~i~G~p~y~--sl 91 (331)
|.-+|+..+ ..++.+| .++..+|+|+|| |+.|+.+++.+ .+.++++++.+ ||+ ..|. .+.|+|+|. ++
T Consensus 62 ~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL 140 (212)
T 3keo_A 62 RGFGYDVKKLMNFFAEILNDHSTTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTI 140 (212)
T ss_dssp TSSSEEHHHHHHHHHHHTTTTSCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGH
T ss_pred CCCCEEHHHHHHHHHHHhCCCCCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHH
Confidence 444664432 2246667 567789999999 99999988863 34589998874 566 6677 789999996 45
Q ss_pred HHhhhcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 92 AEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 92 ~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+++.++.++|.+++++|...++++++.|.+.||++||+|++
T Consensus 141 ~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 141 NDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp HHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 55556678999999999999999999999999999999998
No 20
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.18 E-value=1.4e-10 Score=106.42 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=84.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAME 121 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~ 121 (331)
+||+|+|++|+||+.+.+.+.+. ++++++.+++. .+++++.. .++|++|+|++|+.+.+.++.|++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~------------~dl~~~~~-~~~DvvIDfT~p~a~~~~~~~a~~ 67 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG------------DPLSLLTD-GNTEVVIDFTHPDVVMGNLEFLID 67 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT------------CCTHHHHH-TTCCEEEECSCTTTHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC------------CCHHHHhc-cCCcEEEEccChHHHHHHHHHHHH
Confidence 47899999999999999988875 89999888864 23556554 268999999999999999999999
Q ss_pred cCCcEEEEecCCCChhHHHHHHHHHhccC-CcE-EEccCC
Q 020101 122 AELDLVVCITEGIPQHDMVRVKAALNNQS-KTR-LVGPNC 159 (331)
Q Consensus 122 ~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~-gi~-viGPnc 159 (331)
+|++. |+.|+|+++++..+|.+++ ++. ++. ++.||.
T Consensus 68 ~g~~~-VigTTG~~~e~~~~l~~aa-~~~~~~~vv~a~N~ 105 (245)
T 1p9l_A 68 NGIHA-VVGTTGFTAERFQQVESWL-VAKPNTSVLIAPNF 105 (245)
T ss_dssp TTCEE-EECCCCCCHHHHHHHHHHH-HTSTTCEEEECSCC
T ss_pred cCCCE-EEcCCCCCHHHHHHHHHHH-HhCCCCCEEEECCc
Confidence 99997 6689999998888888877 544 665 778883
No 21
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=99.04 E-value=7.1e-10 Score=106.16 Aligned_cols=123 Identities=17% Similarity=0.151 Sum_probs=87.9
Q ss_pred cccccC--CCCeEEEEEcCCCCCCcHHHHHHHH--------cCCeEEEEeCCCCCCc----eecCcc-cccCHHHhhhcC
Q 020101 34 APAVFV--DKNTRVICQGITGKNGTFHTEQAIE--------YGTKMVGGVTPKKGGT----EHLGLP-VFNTVAEAKAET 98 (331)
Q Consensus 34 l~~ll~--~k~~~VaIvGasgk~G~~~~~~l~~--------~g~~iv~~VnP~~~g~----~i~G~p-~y~sl~dl~~~~ 98 (331)
.++++. .|.+||+|||+ |.+|+.+++.+.. .+.++++.+|+..... +.+|++ +|.+++++.+++
T Consensus 15 ~~~~~~~~MkkirvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~ 93 (393)
T 4fb5_A 15 TENLYFQSMKPLGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADP 93 (393)
T ss_dssp ---------CCCEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCT
T ss_pred ccCccccCCCCccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCC
Confidence 455553 36789999999 9999988775543 2578998888876321 135764 899999999877
Q ss_pred CCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 99 KANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 99 ~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
++|+|+|+||+..+.+.+.+|+++|.+.++=-.-..+.++.++|.+++ +++|+. .+|.|
T Consensus 94 ~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~l~vg~~ 153 (393)
T 4fb5_A 94 EVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATA-ERSGKVAALGYN 153 (393)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH-HHSSSCEEECCG
T ss_pred CCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhH-HhcCCccccccc
Confidence 899999999999999999999999988633111145667888898888 677754 55544
No 22
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=99.03 E-value=7e-10 Score=105.49 Aligned_cols=112 Identities=15% Similarity=0.212 Sum_probs=91.3
Q ss_pred CCeEEEEEcCCCCCCc-HHHHHHHHc-CCeEEEEeCCCCCCceecCcccccCHHHhhhc-CCCCEEEEecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKANASAIYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~-~~~~~l~~~-g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~-~~iDlaii~vp~~~~~~~v~ 117 (331)
+.+||+|||+ |++|+ .+++.+.+. ++++++.+++.. +..|++.|.+++++.++ +++|+++|++|+..+.+.+.
T Consensus 24 ~~~rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav~d~~~---~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~ 99 (330)
T 4ew6_A 24 SPINLAIVGV-GKIVRDQHLPSIAKNANFKLVATASRHG---TVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAY 99 (330)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHHCTTEEEEEEECSSC---CCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHH
T ss_pred CCceEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEeCCh---hhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 5689999999 99998 688888875 789998898875 34789999999999986 68999999999999999999
Q ss_pred HHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 118 EAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 118 ~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+|+++|++. ++=.+ ..+.++.++|.+.+ +++|+. .++.+
T Consensus 100 ~al~aGkhV-l~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 140 (330)
T 4ew6_A 100 KALVAGKHV-FLEKPPGATLSEVADLEALA-NKQGASLFASWH 140 (330)
T ss_dssp HHHHTTCEE-EECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHcCCcE-EEeCCCCCCHHHHHHHHHHH-HhcCCeEEEEeh
Confidence 999999776 44222 45667888888887 677754 44433
No 23
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=99.02 E-value=1.9e-09 Score=101.82 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=91.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc----eecCcccccCHHHhh--------hcCCCCEEEEecCh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT----EHLGLPVFNTVAEAK--------AETKANASAIYVPP 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~----~i~G~p~y~sl~dl~--------~~~~iDlaii~vp~ 109 (331)
.++|+|||+.|.+|+.+++.+.+.+.++++.+|++.... ...+.++|.+++++. ++.++|+++|+||+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPN 82 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCG
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCc
Confidence 578999999788999999999888889998888775321 134678999999998 45689999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 110 PFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
..+.+.+.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .++.+
T Consensus 83 ~~H~~~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 131 (312)
T 3o9z_A 83 HLHYPQIRMALRLGANA-LSEKPLVLWPEEIARLKELE-ARTGRRVYTVLQ 131 (312)
T ss_dssp GGHHHHHHHHHHTTCEE-EECSSSCSCHHHHHHHHHHH-HHHCCCEEECCG
T ss_pred hhhHHHHHHHHHCCCeE-EEECCCCCCHHHHHHHHHHH-HHcCCEEEEEee
Confidence 99999999999999875 44222 45667888888888 677765 45544
No 24
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.96 E-value=1.5e-09 Score=103.30 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=89.0
Q ss_pred cccCCCCeEEEEEcCCCCCCcHH-HHHHHHc-CCeEEEEeCCCCCC-c---eecCcc-cccCHHHhhhcCCCCEEEEecC
Q 020101 36 AVFVDKNTRVICQGITGKNGTFH-TEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 36 ~ll~~k~~~VaIvGasgk~G~~~-~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p-~y~sl~dl~~~~~iDlaii~vp 108 (331)
.++..+.+||+|||+ |++|+.+ .+.+.+. ++++++.+|++... + +-+|+| +|.+++++.++.++|+++|+||
T Consensus 17 n~~~~~mirigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP 95 (350)
T 4had_A 17 NLYFQSMLRFGIIST-AKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP 95 (350)
T ss_dssp -----CCEEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC
T ss_pred cccccCccEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC
Confidence 444556799999999 9999764 5677765 78999888887521 1 135775 8999999998778999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 109 PPFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+..+.+.+.+|+++|.+. ++=-| ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 96 ~~~H~~~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~~~~l~v~~~ 145 (350)
T 4had_A 96 TSQHIEWSIKAADAGKHV-VCEKPLALKAGDIDAVIAAR-DRNKVVVTEAYM 145 (350)
T ss_dssp GGGHHHHHHHHHHTTCEE-EECSCCCSSGGGGHHHHHHH-HHHTCCEEECCG
T ss_pred CchhHHHHHHHHhcCCEE-EEeCCcccchhhHHHHHHHH-HHcCCceeEeee
Confidence 999999999999999876 44222 45667788888887 666654 55544
No 25
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.96 E-value=6e-09 Score=98.60 Aligned_cols=115 Identities=9% Similarity=0.007 Sum_probs=90.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcc-cccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p-~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ |++|+.+++.+.+. ++++++.+|++... + +..|++ +|.+++++.++.++|++++++|+..+.+
T Consensus 4 ~~~rigiiG~-G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (329)
T 3evn_A 4 SKVRYGVVST-AKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYK 82 (329)
T ss_dssp -CEEEEEEBC-CTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CceEEEEEec-hHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 5689999999 99999999888775 67888777776531 1 235776 8999999998668999999999999999
Q ss_pred HHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 115 AILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+|+++|.+. ++=-+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 83 ~~~~al~aGk~V-l~EKP~a~~~~e~~~l~~~a-~~~~~~~~v~~~ 126 (329)
T 3evn_A 83 VAKAALLAGKHV-LVEKPFTLTYDQANELFALA-ESCNLFLMEAQK 126 (329)
T ss_dssp HHHHHHHTTCEE-EEESSCCSSHHHHHHHHHHH-HHTTCCEEEECS
T ss_pred HHHHHHHCCCeE-EEccCCcCCHHHHHHHHHHH-HHcCCEEEEEEc
Confidence 999999999876 44333 56677888888888 677765 45554
No 26
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.95 E-value=3.4e-09 Score=101.19 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=93.3
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
..+.++|+|||+ |++|+.+++.+.+. ++++++.+|++... + +..|++.|.+++++.++.++|++++++|+..+
T Consensus 10 ~~~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 10 TDRKIRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp CSSCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGH
T ss_pred CCCcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHH
Confidence 356799999999 99999999998876 78899888887521 1 13588999999999876689999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 113 AAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 113 ~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+.+|+++|.+. ++-.+ ..+.++..+|.+.+ +++|+. .+|.+
T Consensus 89 ~~~~~~al~~gk~v-~~EKP~a~~~~~~~~l~~~a-~~~g~~~~v~~~ 134 (354)
T 3q2i_A 89 PTQSIECSEAGFHV-MTEKPMATRWEDGLEMVKAA-DKAKKHLFVVKQ 134 (354)
T ss_dssp HHHHHHHHHTTCEE-EECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHHHHHHCCCCE-EEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEEc
Confidence 99999999999765 54333 56677888888887 666755 45544
No 27
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.94 E-value=2.4e-09 Score=101.75 Aligned_cols=115 Identities=18% Similarity=0.232 Sum_probs=92.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
+.++|+|||+ |++|+.+++.+.+. ++++++.+|++... + +..|.++|.+++++.++.++|++++++|+..+.+.
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 81 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDL 81 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHH
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHH
Confidence 4689999999 99999999998886 78888888876521 1 13578899999999987789999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 82 ~~~al~~gk~v-~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 124 (344)
T 3euw_A 82 ITRAVERGIPA-LCEKPIDLDIEMVRACKEKI-GDGASKVMLGFN 124 (344)
T ss_dssp HHHHHHTTCCE-EECSCSCSCHHHHHHHHHHH-GGGGGGEEECCG
T ss_pred HHHHHHcCCcE-EEECCCCCCHHHHHHHHHHH-HhcCCeEEecch
Confidence 99999999886 44444 66778888888888 677754 44544
No 28
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.94 E-value=1.6e-09 Score=103.51 Aligned_cols=115 Identities=13% Similarity=0.145 Sum_probs=92.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
+.++|+|||+ |++|+.+++.+.+. ++++++.+|++... + +..|++.|.+++++.++.++|++++++|+..+.+.
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 82 (354)
T 3db2_A 4 NPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEV 82 (354)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHH
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 4689999999 99999999999886 78999888887521 1 13588999999999976689999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .+|.|
T Consensus 83 ~~~al~~gk~v-l~EKP~~~~~~~~~~l~~~a-~~~~~~~~v~~~ 125 (354)
T 3db2_A 83 IEQCARSGKHI-YVEKPISVSLDHAQRIDQVI-KETGVKFLCGHS 125 (354)
T ss_dssp HHHHHHTTCEE-EEESSSCSSHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred HHHHHHcCCEE-EEccCCCCCHHHHHHHHHHH-HHcCCeEEEeec
Confidence 99999999876 44344 66778888888887 666654 55544
No 29
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.93 E-value=5.2e-09 Score=99.17 Aligned_cols=115 Identities=8% Similarity=-0.030 Sum_probs=91.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCc-ccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~-p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ |++|+.+++.+.+. ++++++.+|++... + +..|+ .+|.+++++.++.++|++++++|+..+.+
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYS 82 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHH
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHH
Confidence 5689999999 99999999999885 78898888887521 1 13577 48999999988668999999999999999
Q ss_pred HHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 115 AILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+|+++|.+. ++=.+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 83 ~~~~al~~gk~v-l~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (330)
T 3e9m_A 83 AAKLALSQGKPV-LLEKPFTLNAAEAEELFAIA-QEQGVFLMEAQK 126 (330)
T ss_dssp HHHHHHHTTCCE-EECSSCCSSHHHHHHHHHHH-HHTTCCEEECCS
T ss_pred HHHHHHHCCCeE-EEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEEh
Confidence 999999999886 44333 56678888888887 677754 44544
No 30
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.93 E-value=6e-09 Score=98.57 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=91.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc----eecCcccccCHHHhhh---------cCCCCEEEEecC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT----EHLGLPVFNTVAEAKA---------ETKANASAIYVP 108 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~----~i~G~p~y~sl~dl~~---------~~~iDlaii~vp 108 (331)
.++|+|||+.|.+|+.+++.+.+.+.++++.+++..... ...+.++|.+++++.+ +.++|+++|+||
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 578999999789999999999888889998888775321 1246789999999872 458999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 109 PPFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+..+.+.+.+|+++|.+. ++=-+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 83 ~~~H~~~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 132 (318)
T 3oa2_A 83 NYLHYPHIAAGLRLGCDV-ICEKPLVPTPEMLDQLAVIE-RETDKRLYNILQ 132 (318)
T ss_dssp GGGHHHHHHHHHHTTCEE-EECSSCCSCHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred cHHHHHHHHHHHHCCCeE-EEECCCcCCHHHHHHHHHHH-HHhCCEEEEEEh
Confidence 999999999999999875 44222 45667888888887 677765 45544
No 31
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.93 E-value=2.4e-09 Score=102.83 Aligned_cols=115 Identities=19% Similarity=0.302 Sum_probs=92.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCc---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
+.++|+|||+ |++|+.+++.+.+. ++++++.+|++.... ...|+++|.+++++.++.++|++++++|+..+.+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 4 KKYQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred CcCcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 5689999999 99999999988876 788988888765211 136889999999999877899999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .+|.|
T Consensus 83 ~~al~aGkhV-l~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~ 124 (359)
T 3e18_A 83 ISALEAGKHV-VCEKPVTMTSEDLLAIMDVA-KRVNKHFMVHQN 124 (359)
T ss_dssp HHHHHTTCEE-EEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHCCCCE-EeeCCCcCCHHHHHHHHHHH-HHhCCeEEEEee
Confidence 9999999776 44333 56677888888887 666654 45544
No 32
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.93 E-value=8.5e-10 Score=99.05 Aligned_cols=109 Identities=14% Similarity=0.150 Sum_probs=85.0
Q ss_pred cCCCCCCCCCC--CCccccc-CCCCeEEEEEcCCCCCCcHHHHH--HHHcCCeEEEEe--CCCCCCceecCcccc--cCH
Q 020101 21 CGQSRSFTTAP--PPAPAVF-VDKNTRVICQGITGKNGTFHTEQ--AIEYGTKMVGGV--TPKKGGTEHLGLPVF--NTV 91 (331)
Q Consensus 21 ~~~~~~~~~~~--~~l~~ll-~~k~~~VaIvGasgk~G~~~~~~--l~~~g~~iv~~V--nP~~~g~~i~G~p~y--~sl 91 (331)
.++.-+|+..+ ..+..+| .++.++|+|+|+ |++|+.+++. ... |+++++.+ ||...|..+.|+|++ .++
T Consensus 56 G~~g~gY~v~~L~~~~~~~lg~~~~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl 133 (211)
T 2dt5_A 56 GTRGVGYTVPVLKRELRHILGLNRKWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLL 133 (211)
T ss_dssp CCTTTCEEHHHHHHHHHHHHTTTSCEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGH
T ss_pred cCCceeEEhHHHHHHHHHHhCcCCCCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhH
Confidence 45555675421 1134444 466789999999 9999998885 223 88888875 566666778898875 467
Q ss_pred HHhhhcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 92 AEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 92 ~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+++.++ ++|.+++++|...++++++.|.++|++.+|++++
T Consensus 134 ~ell~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 134 PQRVPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp HHHSTT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCc
Confidence 777776 8999999999999999999999999999999887
No 33
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=98.92 E-value=3.5e-09 Score=95.72 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=81.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~ 120 (331)
..++..|+|++||||+.+.+...+.++++++.+++.. . +++ . ++|++|+|+.|+.+.+.++.|+
T Consensus 11 ~~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~--~-----------~~l-~--~~DVvIDFT~P~a~~~~~~~~~ 74 (228)
T 1vm6_A 11 HHMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--V-----------EEL-D--SPDVVIDFSSPEALPKTVDLCK 74 (228)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--E-----------EEC-S--CCSEEEECSCGGGHHHHHHHHH
T ss_pred ccceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCC--c-----------ccc-c--CCCEEEECCCHHHHHHHHHHHH
Confidence 4677889999999999998876667999998888653 1 222 2 5899999999999999999999
Q ss_pred HcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCC-CCc
Q 020101 121 EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC-PGV 162 (331)
Q Consensus 121 ~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc-~Gi 162 (331)
++|++. |+.|+||++++.+++.+++ ++ ---++.||. +|+
T Consensus 75 ~~g~~~-ViGTTG~~~~~~~~l~~~a-~~-~~vv~apNfSlGv 114 (228)
T 1vm6_A 75 KYRAGL-VLGTTALKEEHLQMLRELS-KE-VPVVQAYNFSIGI 114 (228)
T ss_dssp HHTCEE-EECCCSCCHHHHHHHHHHT-TT-SEEEECSCCCHHH
T ss_pred HcCCCE-EEeCCCCCHHHHHHHHHHH-hh-CCEEEeccccHHH
Confidence 999997 6699999998887777765 44 223778885 444
No 34
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.92 E-value=2.7e-09 Score=102.36 Aligned_cols=115 Identities=12% Similarity=0.015 Sum_probs=91.4
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCC--ceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG--TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g--~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
+.++|+|||+ |++|+. +.+.+.+. ++++++.+++.... +...+.++|.+++++.++.++|+++|+||+..+.+.+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (362)
T 3fhl_A 4 EIIKTGLAAF-GMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYA 82 (362)
T ss_dssp CCEEEEESCC-SHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred CceEEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 5689999999 999986 78888776 78999888876521 2234788999999999876799999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .+|.|
T Consensus 83 ~~al~aGkhV-l~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~ 124 (362)
T 3fhl_A 83 GMALEAGKNV-VVEKPFTSTTKQGEELIALA-KKKGLMLSVYQN 124 (362)
T ss_dssp HHHHHTTCEE-EEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHCCCeE-EEecCCCCCHHHHHHHHHHH-HHcCCEEEEEec
Confidence 9999999876 44333 56778888888888 667755 45554
No 35
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.91 E-value=2.6e-09 Score=102.16 Aligned_cols=115 Identities=12% Similarity=0.001 Sum_probs=91.0
Q ss_pred CCCeEEEEEcCCCCCCc-HHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 40 DKNTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~-~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
.+.++|+|||+ |++|+ .+++.+.+. ++++++.+|+.... + +..|++.|.+++++.++.++|+++|++|+..+.
T Consensus 25 m~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 103 (350)
T 3rc1_A 25 ANPIRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHA 103 (350)
T ss_dssp -CCEEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHH
T ss_pred CCceEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHH
Confidence 45689999999 99998 688888886 78898888876421 1 235899999999999766799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEcc
Q 020101 114 AAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGP 157 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGP 157 (331)
+.+.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .+|.
T Consensus 104 ~~~~~al~aGk~V-l~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~ 147 (350)
T 3rc1_A 104 EWIDRALRAGKHV-LAEKPLTTDRPQAERLFAVA-RERGLLLMENF 147 (350)
T ss_dssp HHHHHHHHTTCEE-EEESSSCSSHHHHHHHHHHH-HHTTCCEEEEC
T ss_pred HHHHHHHHCCCcE-EEeCCCCCCHHHHHHHHHHH-HHhCCEEEEEe
Confidence 9999999999885 44333 56778888888888 677765 4443
No 36
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.91 E-value=2.3e-09 Score=103.92 Aligned_cols=115 Identities=20% Similarity=0.349 Sum_probs=91.5
Q ss_pred CCeEEEEEcCCC-CCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITG-KNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasg-k~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ | .+|+.+++.+.+. ++++++.+|+.... + +..|++.|.+++++.++.++|+++++||+..+.+
T Consensus 1 ~~~rigiiG~-G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~ 79 (387)
T 3moi_A 1 MKIRFGICGL-GFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCE 79 (387)
T ss_dssp CCEEEEEECC-SHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHH
T ss_pred CceEEEEEeC-CHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHH
Confidence 3589999999 7 8999999988875 78999888887521 1 1358999999999998767999999999999999
Q ss_pred HHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 115 AILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+|+++|++. ++=.+ ..+.++.++|.+++ +++|+. .+|.+
T Consensus 80 ~~~~al~aGk~V-l~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 123 (387)
T 3moi_A 80 HVVQASEQGLHI-IVEKPLTLSRDEADRMIEAV-ERAGVHLVVGTS 123 (387)
T ss_dssp HHHHHHHTTCEE-EECSCCCSCHHHHHHHHHHH-HHHTCCEEECCC
T ss_pred HHHHHHHCCCce-eeeCCccCCHHHHHHHHHHH-HHhCCeEEEEec
Confidence 999999999775 44333 45677888888887 677754 45554
No 37
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.91 E-value=2.6e-09 Score=102.00 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=92.1
Q ss_pred CCCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCC--ceecCcccccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 40 DKNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG--TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g--~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
.+.++|+|||+ |++|+. +.+.+.+. ++++++.+++.... ....+.++|.+++++.++.++|++++++|+..+.+.
T Consensus 5 ~~~~rvgiiG~-G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 83 (352)
T 3kux_A 5 ADKIKVGLLGY-GYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPL 83 (352)
T ss_dssp TCCEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHH
T ss_pred cCCceEEEECC-CHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 45689999999 999986 78888775 78999888876421 124578899999999987679999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+|+++|++. ++=.+ ..+.++.++|.+++ +++|+. .+|.|
T Consensus 84 ~~~al~aGkhV-~~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (352)
T 3kux_A 84 AQSALAAGKHV-VVDKPFTVTLSQANALKEHA-DDAGLLLSVFHN 126 (352)
T ss_dssp HHHHHHTTCEE-EECSSCCSCHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred HHHHHHCCCcE-EEECCCcCCHHHHHHHHHHH-HHcCCeEEEEee
Confidence 99999999775 54334 56678888888888 677765 44544
No 38
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.91 E-value=5.4e-09 Score=97.76 Aligned_cols=114 Identities=10% Similarity=0.037 Sum_probs=89.2
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHH----cCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIE----YGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~----~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
.+.++|+|||+ |.+|+.+++.+.+ .++++++..+++.. .+..|++ |.+++++.++.++|+++++||+..+.+.
T Consensus 5 ~~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~ 81 (294)
T 1lc0_A 5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-GSLDEVR-QISLEDALRSQEIDVAYICSESSSHEDY 81 (294)
T ss_dssp CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-CEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHH
T ss_pred CCcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchHH-HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHH
Confidence 45689999999 9999998887764 36788888887543 3456777 6899999876689999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+|+++|.+. ++=-+ ..+.++.++|.+.+ +++|+. .+|++
T Consensus 82 ~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~~~~~~~ 124 (294)
T 1lc0_A 82 IRQFLQAGKHV-LVEYPMTLSFAAAQELWELA-AQKGRVLHEEHV 124 (294)
T ss_dssp HHHHHHTTCEE-EEESCSCSCHHHHHHHHHHH-HHTTCCEEEECG
T ss_pred HHHHHHCCCcE-EEeCCCCCCHHHHHHHHHHH-HHhCCEEEEEEh
Confidence 99999999876 44222 44567888888888 677765 55554
No 39
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.90 E-value=2.3e-09 Score=102.34 Aligned_cols=113 Identities=11% Similarity=0.041 Sum_probs=89.9
Q ss_pred CeEEEEEcCCCCCCc-HHHHHHHHc-CCeEEEEeCCCCCCcee------cCcccccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 42 NTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGGTEH------LGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 42 ~~~VaIvGasgk~G~-~~~~~l~~~-g~~iv~~VnP~~~g~~i------~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
.++|+|||+ |.+|+ .+.+.+.+. ++++++.+++.. .+.. .+.++|.+++++.++.++|++++++|+..+.
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~-~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 2 TVKMGFIGF-GKSANRYHLPYVMIRETLEVKTIFDLHV-NEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHY 79 (349)
T ss_dssp CEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECTTC-CHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHH
T ss_pred eeEEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEECCCH-HHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHH
Confidence 378999999 99997 677777765 789998999873 2333 5789999999999876799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 114 AAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+.+|+++|++. ++=-+ ..+.++.++|.+++ +++|+. .++.|
T Consensus 80 ~~~~~al~aGk~V-l~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 124 (349)
T 3i23_A 80 DLAKQAILAGKSV-IVEKPFCDTLEHAEELFALG-QEKGVVVMPYQN 124 (349)
T ss_dssp HHHHHHHHTTCEE-EECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred HHHHHHHHcCCEE-EEECCCcCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 9999999999775 44333 45677888888888 677765 44544
No 40
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.90 E-value=3.4e-09 Score=103.27 Aligned_cols=119 Identities=12% Similarity=0.127 Sum_probs=90.4
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHc---------CCeEEEEeCCCCCC-c---eecCc-ccccCHHHhhhcCCCCEEE
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEY---------GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASA 104 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~---------g~~iv~~VnP~~~g-~---~i~G~-p~y~sl~dl~~~~~iDlai 104 (331)
+.+.+||+|||+ |.+|+.+++.+++. +.++++.+|+.... + +.+|. ++|.+++++.+++++|+++
T Consensus 23 Ms~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~ 101 (412)
T 4gqa_A 23 MSARLNIGLIGS-GFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVD 101 (412)
T ss_dssp --CEEEEEEECC-SHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEE
T ss_pred ccccceEEEEcC-cHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEE
Confidence 456699999999 99999998887653 35799888887521 1 13466 5999999999877899999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcE-EEccCC
Q 020101 105 IYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPNC 159 (331)
Q Consensus 105 i~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~-viGPnc 159 (331)
|+||+..+.+.+.+|+++|.+.++=-.-..+.++.++|.+++ +++|+. .+|.|.
T Consensus 102 I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~~ 156 (412)
T 4gqa_A 102 ITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAA-RRAGVKTMVAFNN 156 (412)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHH-HHHTCCEEEECGG
T ss_pred ECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHH-HHhCCeeeeccce
Confidence 999999999999999999987633222245677888888887 666644 566553
No 41
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.89 E-value=4.5e-09 Score=95.01 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=88.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHHHc
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA 122 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~ 122 (331)
++|+|||+ |+||+.+.+++.+.|+++++..|+.. +. . ..|.+++++.+ .++|++++++|++.+.+.+..++++
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~--~~-~--~~~~~~~~l~~-~~~DvVv~~~~~~~~~~~~~~~l~~ 73 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRG--EH-E--KMVRGIDEFLQ-REMDVAVEAASQQAVKDYAEKILKA 73 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC--CC-T--TEESSHHHHTT-SCCSEEEECSCHHHHHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCc--ch-h--hhcCCHHHHhc-CCCCEEEECCCHHHHHHHHHHHHHC
Confidence 37899999 99999999998888999887888764 11 1 17899999884 3799999999999999999999999
Q ss_pred CCcEEEEecCCCCh-hHH-HHHHHHHhccCCcE-EEccCCCCccc
Q 020101 123 ELDLVVCITEGIPQ-HDM-VRVKAALNNQSKTR-LVGPNCPGVIK 164 (331)
Q Consensus 123 Gi~~ivi~t~G~~e-~~~-~~l~~~a~~~~gi~-viGPnc~Gi~~ 164 (331)
|.+. ++.+++... .+. ++|.+.+ +++|.. ++.+|+.|-+.
T Consensus 74 G~~v-v~~~~~~~~~~~~~~~l~~~a-~~~g~~~~i~~~~~g~~~ 116 (236)
T 2dc1_A 74 GIDL-IVLSTGAFADRDFLSRVREVC-RKTGRRVYIASGAIGGLD 116 (236)
T ss_dssp TCEE-EESCGGGGGSHHHHHHHHHHH-HHHCCCEEECCTTCSCHH
T ss_pred CCcE-EEECcccCChHHHHHHHHHHH-HhcCCeEEecCccccChH
Confidence 9875 667776543 344 6777777 677766 67788776543
No 42
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.89 E-value=1.9e-09 Score=97.03 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=76.4
Q ss_pred cCCCCCCCCCC--CCccccc-CCCCeEEEEEcCCCCCCcHHHHH--HHHcCCeEEEEe--CCCCCCceecCccccc--CH
Q 020101 21 CGQSRSFTTAP--PPAPAVF-VDKNTRVICQGITGKNGTFHTEQ--AIEYGTKMVGGV--TPKKGGTEHLGLPVFN--TV 91 (331)
Q Consensus 21 ~~~~~~~~~~~--~~l~~ll-~~k~~~VaIvGasgk~G~~~~~~--l~~~g~~iv~~V--nP~~~g~~i~G~p~y~--sl 91 (331)
.++.-+|+..+ ..+..+| .++.++|+|+|| |++|+.+++. ....|+++++.+ ||...|..+.|+|++. ++
T Consensus 61 G~~g~gY~v~~L~~~~~~~lg~~~~~rV~IIGA-G~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl 139 (215)
T 2vt3_A 61 GKKGYGYNVDYLLSFFRKTLDQDEMTDVILIGV-GNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDL 139 (215)
T ss_dssp C-----EEHHHHHHHHHHHHHHC---CEEEECC-SHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGH
T ss_pred cCCcceEEhHHHHHHHHHHhCcCCCCEEEEEcc-CHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhH
Confidence 45555665421 1134444 456788999999 9999999984 334589988775 5666667789999775 57
Q ss_pred HHhhhcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 020101 92 AEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (331)
Q Consensus 92 ~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G 133 (331)
+++.++ . |++++++|...++++++.|.+.|++.+|+|++=
T Consensus 140 ~eli~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 140 EQHVKD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHCSS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHHh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 777654 3 999999999999999999999999999999983
No 43
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.88 E-value=3.8e-09 Score=101.32 Aligned_cols=116 Identities=17% Similarity=0.211 Sum_probs=91.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHH-Hc-CCeEEEEeCCCCCCc----eecC--cccccCHHHhhhcCCCCEEEEecChhh
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAI-EY-GTKMVGGVTPKKGGT----EHLG--LPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~-~~-g~~iv~~VnP~~~g~----~i~G--~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
.+.++|+|||+ |++|+.+++.+. +. ++++++.+|+..... +..| .+.|.+++++.++.++|++++++|+..
T Consensus 21 m~~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 21 GMTLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred CCeeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 45689999999 999999999888 43 789998888876311 1245 689999999998667999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcEE--EccC
Q 020101 112 AAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTRL--VGPN 158 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~v--iGPn 158 (331)
+.+.+.+|+++|++. ++=.+ ..+.++.++|.+.+ +++|+.+ +|-+
T Consensus 100 h~~~~~~al~aGk~V-l~EKPla~~~~e~~~l~~~a-~~~g~~~~~v~~~ 147 (357)
T 3ec7_A 100 HADVAVAALNANKYV-FCEKPLAVTAADCQRVIEAE-QKNGKRMVQIGFM 147 (357)
T ss_dssp HHHHHHHHHHTTCEE-EEESSSCSSHHHHHHHHHHH-HHHTSCCEEEECG
T ss_pred HHHHHHHHHHCCCCE-EeecCccCCHHHHHHHHHHH-HHhCCeEEEEeec
Confidence 999999999999775 44334 56677888888887 6777654 4443
No 44
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=5.3e-09 Score=100.58 Aligned_cols=116 Identities=14% Similarity=0.089 Sum_probs=90.7
Q ss_pred CCCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCC--ceecCcccccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 40 DKNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG--TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g--~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
++.++|+|||+ |++|+. +.+.+.+. ++++++.+++.... ....+.++|.+++++.++.++|++++++|+..+.+.
T Consensus 5 ~~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~ 83 (364)
T 3e82_A 5 NNTINIALIGY-GFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPL 83 (364)
T ss_dssp --CEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHH
T ss_pred CCcceEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 35689999999 999985 77888775 78999888876521 124578899999999987789999999999999999
Q ss_pred HHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 116 ILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+|+++|++. ++=.+ ..+.++.++|.+++ +++|+. .+|.|
T Consensus 84 ~~~al~aGk~V-l~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 126 (364)
T 3e82_A 84 ARLALNAGKHV-VVDKPFTLDMQEARELIALA-EEKQRLLSVFHN 126 (364)
T ss_dssp HHHHHHTTCEE-EECSCSCSSHHHHHHHHHHH-HHTTCCEEECCC
T ss_pred HHHHHHCCCcE-EEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEee
Confidence 99999999775 44333 45677888888887 677765 44544
No 45
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.87 E-value=5.7e-09 Score=98.67 Aligned_cols=113 Identities=18% Similarity=0.241 Sum_probs=90.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
.++|+|||+ |++|+.+++.+.+. ++++++.+|+.... + +..|++ |.+++++.+++++|++++++|+..+.+.+
T Consensus 3 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 80 (331)
T 4hkt_A 3 TVRFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLI 80 (331)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHH
Confidence 478999999 99999999998885 78898888886521 1 235888 99999999876899999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 81 ~~al~~gk~v-~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~ 122 (331)
T 4hkt_A 81 ERFARAGKAI-FCEKPIDLDAERVRACLKVV-SDTKAKLMVGFN 122 (331)
T ss_dssp HHHHHTTCEE-EECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred HHHHHcCCcE-EEecCCCCCHHHHHHHHHHH-HHcCCeEEEccc
Confidence 9999999775 54333 56778888888887 677755 44443
No 46
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.87 E-value=8.4e-09 Score=98.78 Aligned_cols=116 Identities=8% Similarity=0.075 Sum_probs=89.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecC----cccccCHHHhhhcCCCCEEEEecChh
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLG----LPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G----~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
++.++|+|||+ |++|+.+++.+.+. ++++++.++++... + +..| .++|.+++++.++.++|++++++|+.
T Consensus 4 ~~~~~vgiiG~-G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 4 ETQIRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 82 (362)
T ss_dssp --CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred CCceEEEEECc-hHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH
Confidence 45689999999 99999999988875 68888888876521 1 1234 47899999998766799999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 111 FAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 111 ~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+.+.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 83 ~h~~~~~~al~aGk~V-~~EKP~a~~~~e~~~l~~~a-~~~g~~~~~~~~ 130 (362)
T 1ydw_A 83 LHVEWAIKAAEKGKHI-LLEKPVAMNVTEFDKIVDAC-EANGVQIMDGTM 130 (362)
T ss_dssp GHHHHHHHHHTTTCEE-EECSSCSSSHHHHHHHHHHH-HTTTCCEEECCC
T ss_pred HHHHHHHHHHHCCCeE-EEecCCcCCHHHHHHHHHHH-HHcCCEEEEEEe
Confidence 9999999999999875 44333 45667888888888 777765 45544
No 47
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.87 E-value=5.3e-09 Score=99.60 Aligned_cols=117 Identities=14% Similarity=0.179 Sum_probs=90.9
Q ss_pred CCCCeEEEEEcCCC-CCCcHHHHHHHHc--CCeEEEEeCCCCCCc----eecCc-ccccCHHHhhhcCCCCEEEEecChh
Q 020101 39 VDKNTRVICQGITG-KNGTFHTEQAIEY--GTKMVGGVTPKKGGT----EHLGL-PVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 39 ~~k~~~VaIvGasg-k~G~~~~~~l~~~--g~~iv~~VnP~~~g~----~i~G~-p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
.++.++|+|||+ | .+|+.+++.+.+. ++++++.+|+..... +..|. ++|.+++++.++.++|+++|+||+.
T Consensus 15 ~~~~irvgiIG~-G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 15 PLRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp -CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred CCCceeEEEEec-CHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 467899999999 7 7898889888875 578988888865211 12465 7899999999876899999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 111 FAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 111 ~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+.+.+|+++|.+. ++=.+ ..+.++.++|.+++ +++|+. .+|.+
T Consensus 94 ~H~~~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 141 (340)
T 1zh8_A 94 LNLPFIEKALRKGVHV-ICEKPISTDVETGKKVVELS-EKSEKTVYIAEN 141 (340)
T ss_dssp GHHHHHHHHHHTTCEE-EEESSSSSSHHHHHHHHHHH-HHCSSCEEEECG
T ss_pred HHHHHHHHHHHCCCcE-EEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 9999999999999875 44333 45667888888888 677754 44544
No 48
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.86 E-value=8e-09 Score=97.06 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=88.2
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-cee-cCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TEH-LGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~~i-~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
++.++|+|||+ |++|+.+++.+.+. ++++++.+|+.... +.. ..++.|.+++++.++.++|++++++|+..+.+.+
T Consensus 8 ~~~~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 86 (315)
T 3c1a_A 8 NSPVRLALIGA-GRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEIT 86 (315)
T ss_dssp -CCEEEEEEEC-TTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHHH
T ss_pred CCcceEEEECC-cHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHHH
Confidence 45689999999 99999999999885 68888787775410 111 1167899999998655799999999999999999
Q ss_pred HHHHHcCCcEEEEec-CCCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCIT-EGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t-~G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++-. ...+.++..+|.+.+ +++|+. .+|.+
T Consensus 87 ~~al~~Gk~v-~~eKP~~~~~~~~~~l~~~a-~~~g~~~~~~~~ 128 (315)
T 3c1a_A 87 LAAIASGKAV-LVEKPLTLDLAEAEAVAAAA-KATGVMVWVEHT 128 (315)
T ss_dssp HHHHHTTCEE-EEESSSCSCHHHHHHHHHHH-HHHCCCEEEECG
T ss_pred HHHHHCCCcE-EEcCCCcCCHHHHHHHHHHH-HHcCCEEEEeec
Confidence 9999999775 4432 345677788888887 666755 55554
No 49
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.86 E-value=1.5e-08 Score=95.96 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=85.9
Q ss_pred CCeEEEEEcCCCCCCc-HHHHHHHHcCCeEEEEeCCCCCCc-----eecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGT-FHTEQAIEYGTKMVGGVTPKKGGT-----EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~-~~~~~l~~~g~~iv~~VnP~~~g~-----~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ |++|. .+++.+...++++++.+|+..... ...+.++|.+++++.++.++|+++++||+..+.+
T Consensus 3 ~~~rvgiiG~-G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (336)
T 2p2s_A 3 KKIRFAAIGL-AHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAE 81 (336)
T ss_dssp -CCEEEEECC-SSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CccEEEEECC-ChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHH
Confidence 4578999999 88875 456667666899988888765311 1226789999999998668999999999999999
Q ss_pred HHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEc
Q 020101 115 AILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVG 156 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viG 156 (331)
.+.+|+++|.+. ++=.+ ..+.++.++|.+.+ +++|+. .+|
T Consensus 82 ~~~~al~aGkhV-l~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~ 123 (336)
T 2p2s_A 82 LALRTLDAGKDF-FTAKPPLTTLEQLDAVQRRV-AETGRKFAVY 123 (336)
T ss_dssp HHHHHHHTTCEE-EECSSCCSCHHHHHHHHHHH-HHHCCCEEEC
T ss_pred HHHHHHHCCCcE-EEeCCCCCCHHHHHHHHHHH-HHcCCEEEEe
Confidence 999999999875 44222 34567788888887 677755 344
No 50
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.86 E-value=1.8e-08 Score=96.81 Aligned_cols=115 Identities=10% Similarity=0.081 Sum_probs=88.0
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHcCCeEEEEeCCCCCC-c---eecC-cccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEYGTKMVGGVTPKKGG-T---EHLG-LPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~g~~iv~~VnP~~~g-~---~i~G-~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ |.++.. +.+.+...++++++.+|+.... + +..| .++|.+++++.++.++|+++|+||+..+.+
T Consensus 25 ~~irvgiiG~-G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~ 103 (361)
T 3u3x_A 25 DELRFAAVGL-NHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAE 103 (361)
T ss_dssp -CCEEEEECC-CSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHH
T ss_pred cCcEEEEECc-CHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 5689999999 888854 5566666789999888887521 1 1234 679999999998767999999999999999
Q ss_pred HHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 115 AILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .+|.|
T Consensus 104 ~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~l~v~~~ 147 (361)
T 3u3x_A 104 LAIRAMQHGKDV-LVDKPGMTSFDQLAKLRRVQ-AETGRIFSILYS 147 (361)
T ss_dssp HHHHHHHTTCEE-EEESCSCSSHHHHHHHHHHH-HTTCCCEEEECH
T ss_pred HHHHHHHCCCeE-EEeCCCCCCHHHHHHHHHHH-HHcCCEEEEech
Confidence 999999999876 44233 55677888898888 677765 44533
No 51
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.84 E-value=1.5e-08 Score=99.94 Aligned_cols=116 Identities=12% Similarity=0.121 Sum_probs=90.4
Q ss_pred CCCeEEEEEcC---CCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-c---eecCcc---cccCHHHhhhcCCCCEEEEec
Q 020101 40 DKNTRVICQGI---TGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLP---VFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 40 ~k~~~VaIvGa---sgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~---~i~G~p---~y~sl~dl~~~~~iDlaii~v 107 (331)
.+.++|+|||+ .|.+|+.+++.+.+. ++++++.+|+.... + +..|++ +|.+++++.++.++|+++|+|
T Consensus 18 m~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~t 97 (438)
T 3btv_A 18 AAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAI 97 (438)
T ss_dssp -CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECS
T ss_pred cCCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeC
Confidence 36799999999 489999999998886 68899888886521 1 134666 899999999866799999999
Q ss_pred ChhhHHHHHHHHHHcCC-----cEEEEecC-CCChhHHHHHHHHHhccCCcE-EEc
Q 020101 108 PPPFAAAAILEAMEAEL-----DLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVG 156 (331)
Q Consensus 108 p~~~~~~~v~~~~~~Gi-----~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viG 156 (331)
|+..+.+.+.+|+++|. +.+++=.+ ..+.++.++|.+++ +++|+. .+|
T Consensus 98 p~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~ 152 (438)
T 3btv_A 98 QVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAA-AERGVQTIIS 152 (438)
T ss_dssp CHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHH-HTTTCEEEEE
T ss_pred CcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHH-HHcCCeEEEe
Confidence 99999999999999992 44455332 45667888888888 777865 444
No 52
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.82 E-value=5.5e-09 Score=99.38 Aligned_cols=114 Identities=18% Similarity=0.239 Sum_probs=90.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHH-H-cCCeEEEEeCCCCCC-c---eecC--cccccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAI-E-YGTKMVGGVTPKKGG-T---EHLG--LPVFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~-~-~g~~iv~~VnP~~~g-~---~i~G--~p~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
.++|+|||+ |++|+.+++.+. + .++++++.+|++... + +..| .+.|.+++++.++.++|++++++|+..+.
T Consensus 2 ~~rigiIG~-G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 80 (344)
T 3mz0_A 2 SLRIGVIGT-GAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE 80 (344)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred eEEEEEECc-cHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHH
Confidence 378999999 999999999988 5 378899888886521 1 1246 67899999999866799999999999999
Q ss_pred HHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcEE--EccC
Q 020101 114 AAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTRL--VGPN 158 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~v--iGPn 158 (331)
+.+.+|+++|.+. ++=.+ ..+.++.++|.+.+ +++|+.+ +|-+
T Consensus 81 ~~~~~al~~Gk~v-l~EKP~a~~~~e~~~l~~~a-~~~g~~~~~v~~~ 126 (344)
T 3mz0_A 81 SSVLKAIKAQKYV-FCEKPLATTAEGCMRIVEEE-IKVGKRLVQVGFM 126 (344)
T ss_dssp HHHHHHHHTTCEE-EECSCSCSSHHHHHHHHHHH-HHHSSCCEEECCG
T ss_pred HHHHHHHHCCCcE-EEcCCCCCCHHHHHHHHHHH-HHHCCEEEEEecc
Confidence 9999999999765 44333 56677888888887 6777654 4443
No 53
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.82 E-value=1.8e-08 Score=95.57 Aligned_cols=116 Identities=20% Similarity=0.358 Sum_probs=88.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHH-Hc-CCeEEEEeCCCCCCc----eecCc-ccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAI-EY-GTKMVGGVTPKKGGT----EHLGL-PVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~-~~-g~~iv~~VnP~~~g~----~i~G~-p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
++.++|+|||+ |++|+.+++.+. +. ++++++.++++.... +..|. ++|.+++++.++.++|++++++|+..+
T Consensus 6 ~~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 6 RKPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp CCCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH
T ss_pred CCcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH
Confidence 45689999999 999999999988 54 788887888765211 12466 689999999875579999999999999
Q ss_pred HHHHHHHHHcCCcEEEEec-CCCChhHHHHHHHHHhccC-CcEE-EccC
Q 020101 113 AAAILEAMEAELDLVVCIT-EGIPQHDMVRVKAALNNQS-KTRL-VGPN 158 (331)
Q Consensus 113 ~~~v~~~~~~Gi~~ivi~t-~G~~e~~~~~l~~~a~~~~-gi~v-iGPn 158 (331)
.+.+.+|+++|.+. ++-. ...+.++.++|.+.+ +++ |+.+ ++.+
T Consensus 85 ~~~~~~al~~G~~v-~~eKp~~~~~~~~~~l~~~a-~~~~~~~~~~~~~ 131 (346)
T 3cea_A 85 PEMTIYAMNAGLNV-FCEKPLGLDFNEVDEMAKVI-KSHPNQIFQSGFM 131 (346)
T ss_dssp HHHHHHHHHTTCEE-EECSCCCSCHHHHHHHHHHH-HTCTTSCEECCCG
T ss_pred HHHHHHHHHCCCEE-EEcCCCCCCHHHHHHHHHHH-HhCCCCeEEEecc
Confidence 99999999999765 4422 245567777888887 677 7664 3443
No 54
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.80 E-value=7.4e-09 Score=99.26 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=90.6
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCC--ceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG--TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g--~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
+.++|+|||+ |++|+. +.+.+.+. ++++++.+++.... +...+.++|.+++++.++.++|++++++|+..+.+.+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (358)
T 3gdo_A 4 DTIKVGILGY-GLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT 82 (358)
T ss_dssp TCEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 5689999999 999985 77877765 78999888876521 1234789999999999877899999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .+|.|
T Consensus 83 ~~al~aGkhV-l~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 124 (358)
T 3gdo_A 83 MACIQAGKHV-VMEKPMTATAEEGETLKRAA-DEKGVLLSVYHN 124 (358)
T ss_dssp HHHHHTTCEE-EEESSCCSSHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHHcCCeE-EEecCCcCCHHHHHHHHHHH-HHcCCeEEEeee
Confidence 9999999775 44333 56677888888888 666654 45544
No 55
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.80 E-value=8.9e-09 Score=97.94 Aligned_cols=113 Identities=16% Similarity=0.257 Sum_probs=89.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcc-cccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p-~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
++|+|||+ |++|+.+++.+.+. ++++++.+|+.... + +..|++ +|.+++++.++.++|++++++|+..+.+.+
T Consensus 3 ~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 81 (344)
T 3ezy_A 3 LRIGVIGL-GRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV 81 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHH
Confidence 68999999 99999999988875 78898888886521 1 135665 899999999876899999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++=.+ ..+.++.++|.+++ +++|+. .+|.+
T Consensus 82 ~~al~~gk~v-~~EKP~~~~~~e~~~l~~~a-~~~g~~~~v~~~ 123 (344)
T 3ezy_A 82 IACAKAKKHV-FCEKPLSLNLADVDRMIEET-KKADVILFTGFN 123 (344)
T ss_dssp HHHHHTTCEE-EEESCSCSCHHHHHHHHHHH-HHHTCCEEEECG
T ss_pred HHHHhcCCeE-EEECCCCCCHHHHHHHHHHH-HHhCCcEEEeec
Confidence 9999999775 44444 67778888888887 666754 44544
No 56
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.80 E-value=6.4e-09 Score=100.83 Aligned_cols=112 Identities=12% Similarity=0.218 Sum_probs=87.3
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhH-
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFA- 112 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~- 112 (331)
.+.+||+|||+ | +|+.+++.+.+. ++++++.++++... + +-+|+|+|.+++++++ ++|+++|+||+..+
T Consensus 5 ~~~~rv~VvG~-G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~--~~D~v~i~~p~~~h~ 80 (372)
T 4gmf_A 5 SPKQRVLIVGA-K-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITG--MPDIACIVVRSTVAG 80 (372)
T ss_dssp --CEEEEEECS-T-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCS--CCSEEEECCC--CTT
T ss_pred CCCCEEEEEeh-H-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhc--CCCEEEEECCCcccc
Confidence 35689999998 7 899988888764 68999889987621 1 2479999999999997 79999999999887
Q ss_pred ---HHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 113 ---AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 113 ---~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+++++|+++|++. ++=-+ ++.++.++|.+.| +++|+. .+|-+
T Consensus 81 ~~~~~~a~~al~aGkhV-l~EKP-l~~~ea~~l~~~A-~~~g~~~~v~~~ 127 (372)
T 4gmf_A 81 GAGTQLARHFLARGVHV-IQEHP-LHPDDISSLQTLA-QEQGCCYWINTF 127 (372)
T ss_dssp SHHHHHHHHHHHTTCEE-EEESC-CCHHHHHHHHHHH-HHHTCCEEEECS
T ss_pred hhHHHHHHHHHHcCCcE-EEecC-CCHHHHHHHHHHH-HHcCCEEEEcCc
Confidence 89999999999987 43333 6778888898888 778865 55544
No 57
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.79 E-value=1.3e-08 Score=95.90 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=86.7
Q ss_pred eEEEEEcCCCCCCcHH-HHHHHHcCCeEEEEeCCCCCCc----eecCcc-cccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 43 TRVICQGITGKNGTFH-TEQAIEYGTKMVGGVTPKKGGT----EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~-~~~l~~~g~~iv~~VnP~~~g~----~i~G~p-~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
++|+|||+ |++|+.+ .+.+.+.++++++.+|++.... +..|.+ +|.+++++.++.++|++++++|+..+.+.+
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 79 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQT 79 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred CeEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHH
Confidence 47899999 9999987 7777777788888888765211 124775 899999998755799999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .+|++
T Consensus 80 ~~al~~Gk~v-~~ekP~~~~~~~~~~l~~~a-~~~g~~~~~~~~ 121 (332)
T 2glx_A 80 LAAIRAGKHV-LCEKPLAMTLEDAREMVVAA-REAGVVLGTNHH 121 (332)
T ss_dssp HHHHHTTCEE-EECSSSCSSHHHHHHHHHHH-HHHTCCEEECCC
T ss_pred HHHHHCCCeE-EEeCCCcCCHHHHHHHHHHH-HHcCCEEEEeeh
Confidence 9999999765 44332 45667778888887 666755 45554
No 58
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.79 E-value=8.2e-09 Score=96.60 Aligned_cols=111 Identities=13% Similarity=0.097 Sum_probs=87.4
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ |++|+. +++.+.+. ++++++.+|+.... + +..|++.|.+++++.+ ++|++++++|+..+.+
T Consensus 5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~--~~D~V~i~tp~~~h~~ 81 (308)
T 3uuw_A 5 KNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAK--KCDCIFLHSSTETHYE 81 (308)
T ss_dssp CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHT--TCSEEEECCCGGGHHH
T ss_pred ccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHh--cCCEEEEeCCcHhHHH
Confidence 4588999999 999986 78888774 78999888887521 1 1358888999999998 8999999999999999
Q ss_pred HHHHHHHcCCcEEEEe-cCCCChhHHHHHHHHHhccCCcE-EEc
Q 020101 115 AILEAMEAELDLVVCI-TEGIPQHDMVRVKAALNNQSKTR-LVG 156 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~-t~G~~e~~~~~l~~~a~~~~gi~-viG 156 (331)
.+.+|+++|.+. ++= ....+.++.++|.+.+ +++|+. .+|
T Consensus 82 ~~~~al~~gk~v-l~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~ 123 (308)
T 3uuw_A 82 IIKILLNLGVHV-YVDKPLASTVSQGEELIELS-TKKNLNLMVG 123 (308)
T ss_dssp HHHHHHHTTCEE-EECSSSSSSHHHHHHHHHHH-HHHTCCEEEC
T ss_pred HHHHHHHCCCcE-EEcCCCCCCHHHHHHHHHHH-HHcCCEEEEe
Confidence 999999999885 432 2245667888888887 677754 444
No 59
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.79 E-value=6.5e-09 Score=98.99 Aligned_cols=114 Identities=10% Similarity=-0.051 Sum_probs=87.4
Q ss_pred CeEEEEEcCCCCCCcH-HHH-HHHH-cCCeEEEEeCCCCCC----ceecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 42 NTRVICQGITGKNGTF-HTE-QAIE-YGTKMVGGVTPKKGG----TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~-~~~-~l~~-~g~~iv~~VnP~~~g----~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
.++|+|||+ |++|+. +.+ .+.. .++++++.+|+.... .+..+.++|.+++++.++.++|++++++|+..+.+
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (345)
T 3f4l_A 2 VINCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFE 80 (345)
T ss_dssp CEEEEEECC-SHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHH
T ss_pred ceEEEEEec-CHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 478999999 999974 777 4344 378999888876531 12357889999999998667999999999999999
Q ss_pred HHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 115 AILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .++.|
T Consensus 81 ~~~~al~aGk~V-l~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~ 124 (345)
T 3f4l_A 81 YAKRALEAGKNV-LVEKPFTPTLAQAKELFALA-KSKGLTVTPYQN 124 (345)
T ss_dssp HHHHHHHTTCEE-EECSSSCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred HHHHHHHcCCcE-EEeCCCCCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 999999999775 44232 45667888888887 667755 44544
No 60
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.79 E-value=2.6e-08 Score=93.60 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=84.9
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCCc----eecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGGT----EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g~----~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|||+ |++|+. +++.+.+. ++++++.+|+..... +..|+++|.+.+++. .++|++++++|+..+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~--~~~D~V~i~tp~~~h~~ 80 (319)
T 1tlt_A 4 KKLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLA--ASCDAVFVHSSTASHFD 80 (319)
T ss_dssp -CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHH--TTCSEEEECSCTTHHHH
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhh--cCCCEEEEeCCchhHHH
Confidence 4589999999 999986 88888764 788888888765321 134788899999883 37999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEE
Q 020101 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~v 154 (331)
.+.+|+++|++.++--....+.++.++|.+.+ +++|+.+
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a-~~~g~~~ 119 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELA-ARKKLTL 119 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH-HHTTCCE
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCeE
Confidence 99999999987643222356677888888887 6777653
No 61
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.78 E-value=1.2e-08 Score=97.88 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=88.9
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHc-CCeEEEEeCCCCCC-----ceecCcccccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEY-GTKMVGGVTPKKGG-----TEHLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~-g~~iv~~VnP~~~g-----~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
+.++|+|||+ |++|+. +++.+.+. ++++++.+|+.... +...+.++|.+++++.++.++|+++|++|+..+.
T Consensus 4 ~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 4 SLIKVGLVGI-GAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 4689999999 999885 77888775 78898888876421 1123678999999999876899999999999999
Q ss_pred HHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 114 AAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+.+|+++|++. ++=-+ ..+.++.++|.+.+ +++|+. .+|.|
T Consensus 83 ~~~~~al~aGkhV-l~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 127 (359)
T 3m2t_A 83 EMGLLAMSKGVNV-FVEKPPCATLEELETLIDAA-RRSDVVSGVGMN 127 (359)
T ss_dssp HHHHHHHHTTCEE-EECSCSCSSHHHHHHHHHHH-HHHTCCEEECCH
T ss_pred HHHHHHHHCCCeE-EEECCCcCCHHHHHHHHHHH-HHcCCEEEEEec
Confidence 9999999999885 44222 45667888888887 666654 44543
No 62
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.77 E-value=1.5e-08 Score=95.87 Aligned_cols=114 Identities=11% Similarity=0.119 Sum_probs=88.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCCCCCC-c---eecCcc-cccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPKKGG-T---EHLGLP-VFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP~~~g-~---~i~G~p-~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
.+||+|||+ |++|+.+++.+.+. ++++++..+++... + +..|++ +|.+++++.++.++|+++++||+..+.
T Consensus 2 ~~rigiiG~-G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 80 (334)
T 3ohs_X 2 ALRWGIVSV-GLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHK 80 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHH
T ss_pred ccEEEEECc-hHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHH
Confidence 378999998 99999998888765 35788888886521 1 135774 899999999877899999999999999
Q ss_pred HHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 114 AAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+.+.+|+++|.+. ++=-+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 81 ~~~~~al~~GkhV-l~EKP~a~~~~e~~~l~~~a-~~~~~~~~v~~~ 125 (334)
T 3ohs_X 81 AAVMLCLAAGKAV-LCEKPMGVNAAEVREMVTEA-RSRGLFLMEAIW 125 (334)
T ss_dssp HHHHHHHHTTCEE-EEESSSSSSHHHHHHHHHHH-HHTTCCEEEECG
T ss_pred HHHHHHHhcCCEE-EEECCCCCCHHHHHHHHHHH-HHhCCEEEEEEh
Confidence 9999999999775 44333 45667888888888 677754 44443
No 63
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.77 E-value=2.5e-08 Score=93.97 Aligned_cols=112 Identities=11% Similarity=0.053 Sum_probs=86.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-c---eecCc-ccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~-p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
++|+|||+ |++|+.+++.+.+. ++++++.++++... + +..|. +.|.+++++. +.++|++++++|+..+.+.+
T Consensus 2 ~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~D~V~i~tp~~~h~~~~ 79 (325)
T 2ho3_A 2 LKLGVIGT-GAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFF-KSSFDLVYIASPNSLHFAQA 79 (325)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHH-TSSCSEEEECSCGGGHHHHH
T ss_pred eEEEEEeC-CHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHh-CCCCCEEEEeCChHHHHHHH
Confidence 68999999 99999999988876 67888888876421 1 12354 6899999998 44899999999999999999
Q ss_pred HHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 117 LEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
.+|+++|.+. ++-.+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 80 ~~al~~gk~V-~~EKP~~~~~~~~~~l~~~a-~~~g~~~~~~~~ 121 (325)
T 2ho3_A 80 KAALSAGKHV-ILEKPAVSQPQEWFDLIQTA-EKNNCFIFEAAR 121 (325)
T ss_dssp HHHHHTTCEE-EEESSCCSSHHHHHHHHHHH-HHTTCCEEEECT
T ss_pred HHHHHcCCcE-EEecCCcCCHHHHHHHHHHH-HHcCCEEEEEEh
Confidence 9999999876 44333 45667788888887 677755 45544
No 64
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.75 E-value=1.1e-08 Score=97.74 Aligned_cols=116 Identities=14% Similarity=0.051 Sum_probs=85.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc--------CCeEEEEeCCCCCC-c---eecCc-ccccCHHHhhhcCCCCEEEEec
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY--------GTKMVGGVTPKKGG-T---EHLGL-PVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~--------g~~iv~~VnP~~~g-~---~i~G~-p~y~sl~dl~~~~~iDlaii~v 107 (331)
+.+||+|||+ |.+|+.+++.+.+. +.++++.+|++... + +..|+ ++|.+++++.+++++|+++|+|
T Consensus 5 ~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 5 TNLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp CEEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECS
T ss_pred CcCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 4589999999 99999888877653 23788888887521 1 13465 4899999999877899999999
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHH---HhccCCcE-EEccC
Q 020101 108 PPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAA---LNNQSKTR-LVGPN 158 (331)
Q Consensus 108 p~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~---a~~~~gi~-viGPn 158 (331)
|+..+.+.+.+|+++|.+.++=-.-..+.++.++|.+. + ++.|+. .+|.+
T Consensus 84 P~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~-~~~g~~~~v~~~ 137 (390)
T 4h3v_A 84 PGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKA-AAGGIRSMVGFT 137 (390)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH-HHTTCCEEEECG
T ss_pred ChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHH-HhcCCceEEEee
Confidence 99999999999999998763322224556677777444 4 456644 55654
No 65
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.74 E-value=3.4e-08 Score=95.96 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=88.2
Q ss_pred CCeEEEEEcCCCC---CCcHHHHHHHHc-CCeEEE-EeCCCCCC-c---eecCc---ccccCHHHhhhc-----CCCCEE
Q 020101 41 KNTRVICQGITGK---NGTFHTEQAIEY-GTKMVG-GVTPKKGG-T---EHLGL---PVFNTVAEAKAE-----TKANAS 103 (331)
Q Consensus 41 k~~~VaIvGasgk---~G~~~~~~l~~~-g~~iv~-~VnP~~~g-~---~i~G~---p~y~sl~dl~~~-----~~iDla 103 (331)
+.++|+|||+ |+ +|+.+...+... ++++++ .+++.... + +..|+ ++|.+++++.++ .++|++
T Consensus 11 ~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 89 (398)
T 3dty_A 11 QPIRWAMVGG-GSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAV 89 (398)
T ss_dssp SCEEEEEEEC-CTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEE
T ss_pred CcceEEEEcC-CccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEE
Confidence 5689999999 88 999999888765 588887 55776421 1 13577 699999999874 359999
Q ss_pred EEecChhhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 104 AIYVPPPFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 104 ii~vp~~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+|+||+..+.+.+.+|+++|.+. ++=-+ ..+.++.++|.+++ +++|+. .+|-|
T Consensus 90 ~i~tp~~~H~~~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~ 144 (398)
T 3dty_A 90 SIATPNGTHYSITKAALEAGLHV-VCEKPLCFTVEQAENLRELS-HKHNRIVGVTYG 144 (398)
T ss_dssp EEESCGGGHHHHHHHHHHTTCEE-EECSCSCSCHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred EECCCcHHHHHHHHHHHHCCCeE-EEeCCCcCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 99999999999999999999875 43122 45667888888888 677755 45544
No 66
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.74 E-value=1.2e-08 Score=100.43 Aligned_cols=117 Identities=15% Similarity=0.217 Sum_probs=89.6
Q ss_pred CCCCeEEEEEcCCCCCCc-HHHHHHHHc-CCeEEEEeCCCCCC-c---eecCcc-----cccCHHHhhhcCCCCEEEEec
Q 020101 39 VDKNTRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGG-T---EHLGLP-----VFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~-~~~~~l~~~-g~~iv~~VnP~~~g-~---~i~G~p-----~y~sl~dl~~~~~iDlaii~v 107 (331)
..+.++|+|||+ |++|+ .+++.+.+. ++++++.+|+.... + +..|++ +|.+++++.++.++|++++++
T Consensus 80 ~~~~irigiIG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 80 EDRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp CCCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred CCCceEEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 346789999999 99997 788888775 67888888876521 1 124654 799999998766799999999
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 108 PPPFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 108 p~~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
|+..+.+.+.+|+++|.+. ++=.+ ..+.++.++|.+.+ +++|+. .+|.+
T Consensus 159 p~~~h~~~~~~al~aGk~V-l~EKPla~~~~e~~~l~~~a-~~~g~~~~v~~~ 209 (433)
T 1h6d_A 159 PNSLHAEFAIRAFKAGKHV-MCEKPMATSVADCQRMIDAA-KAANKKLMIGYR 209 (433)
T ss_dssp CGGGHHHHHHHHHHTTCEE-EECSSCCSSHHHHHHHHHHH-HHHTCCEEECCG
T ss_pred CchhHHHHHHHHHHCCCcE-EEcCCCCCCHHHHHHHHHHH-HHhCCeEEEEec
Confidence 9999999999999999875 44322 45667788888887 666754 55544
No 67
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.73 E-value=1.5e-08 Score=95.38 Aligned_cols=113 Identities=14% Similarity=0.129 Sum_probs=79.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~ 119 (331)
+.++|+|||+ |++|+.+++.+.+. ++++++.+++....-+..|++ |.+++++.+..++|++++++|+..+.+.+..|
T Consensus 8 ~~irv~IIG~-G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~-~~~~~~l~~~~~~DvViiatp~~~h~~~~~~a 85 (304)
T 3bio_A 8 KKIRAAIVGY-GNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQP-FRVVSDIEQLESVDVALVCSPSREVERTALEI 85 (304)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECC-------CCTT-SCEESSGGGSSSCCEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEECC-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCC-cCCHHHHHhCCCCCEEEECCCchhhHHHHHHH
Confidence 4689999999 99999999988874 788887777654211225666 43333333223799999999999999999999
Q ss_pred HHcCCcEEEEecC--CCChhHHHHHHHHHhccCCcE-EEcc
Q 020101 120 MEAELDLVVCITE--GIPQHDMVRVKAALNNQSKTR-LVGP 157 (331)
Q Consensus 120 ~~~Gi~~ivi~t~--G~~e~~~~~l~~~a~~~~gi~-viGP 157 (331)
+++|++.+ +-.+ +.+.++..+|.+.+ ++.|+. +++.
T Consensus 86 l~aG~~Vi-~ekP~~a~~~~~~~~l~~~a-~~~g~~~~v~~ 124 (304)
T 3bio_A 86 LKKGICTA-DSFDIHDGILALRRSLGDAA-GKSGAAAVIAS 124 (304)
T ss_dssp HTTTCEEE-ECCCCGGGHHHHHHHHHHHH-HHHTCEEECSC
T ss_pred HHcCCeEE-ECCCCCCCCHHHHHHHHHHH-HhCCCEEEEeC
Confidence 99998864 4343 44556777888877 666744 5553
No 68
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.70 E-value=4.3e-08 Score=95.97 Aligned_cols=116 Identities=22% Similarity=0.262 Sum_probs=88.7
Q ss_pred CCeEEEEEcCCCC---CCcHHHHHHHHc-CCeEEE-EeCCCCCC-c---eecCc---ccccCHHHhhhc-----CCCCEE
Q 020101 41 KNTRVICQGITGK---NGTFHTEQAIEY-GTKMVG-GVTPKKGG-T---EHLGL---PVFNTVAEAKAE-----TKANAS 103 (331)
Q Consensus 41 k~~~VaIvGasgk---~G~~~~~~l~~~-g~~iv~-~VnP~~~g-~---~i~G~---p~y~sl~dl~~~-----~~iDla 103 (331)
+.++|+|||+ |+ +|+.+.+.+... ++++++ .+++.... + +..|+ ++|.+++++.++ .++|++
T Consensus 36 ~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 36 KRIRLGMVGG-GSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp CCEEEEEESC-C--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred CcceEEEEcC-CCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEE
Confidence 5689999999 88 898888887775 478886 66776421 1 13577 599999999875 569999
Q ss_pred EEecChhhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccCC
Q 020101 104 AIYVPPPFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPNC 159 (331)
Q Consensus 104 ii~vp~~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPnc 159 (331)
+|+||+..+.+.+.+|+++|++. ++=-+ ..+.++.++|.+++ +++|+. .+|-|.
T Consensus 115 ~I~tp~~~H~~~~~~al~aGkhV-l~EKPla~~~~ea~~l~~~a-~~~g~~~~v~~~~ 170 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKEFLKRGIHV-ICDKPLTSTLADAKKLKKAA-DESDALFVLTHNY 170 (417)
T ss_dssp EECSCTTSHHHHHHHHHTTTCEE-EEESSSCSSHHHHHHHHHHH-HHCSSCEEEECGG
T ss_pred EECCCcHHHHHHHHHHHhCCCeE-EEECCCcCCHHHHHHHHHHH-HHcCCEEEEEecc
Confidence 99999999999999999999885 44233 56677888888888 677754 556553
No 69
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.70 E-value=4.8e-08 Score=97.58 Aligned_cols=118 Identities=13% Similarity=0.085 Sum_probs=90.6
Q ss_pred CCCeEEEEEcCC---CCCCcHHHHHHHHc--CCeEEEEeCCCCCC-c---eecCcc---cccCHHHhhhcCCCCEEEEec
Q 020101 40 DKNTRVICQGIT---GKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T---EHLGLP---VFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 40 ~k~~~VaIvGas---gk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~---~i~G~p---~y~sl~dl~~~~~iDlaii~v 107 (331)
.+.++|+|||++ |.+|+.+++.+.+. ++++++.+|+.... + +..|++ +|.+++++.++.++|+++|+|
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~t 116 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSV 116 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECS
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcC
Confidence 356899999995 77888889988875 68899888876521 1 135665 899999999766899999999
Q ss_pred ChhhHHHHHHHHHHcCC-----cEEEEecC-CCChhHHHHHHHHHhccCC-cE-EEccC
Q 020101 108 PPPFAAAAILEAMEAEL-----DLVVCITE-GIPQHDMVRVKAALNNQSK-TR-LVGPN 158 (331)
Q Consensus 108 p~~~~~~~v~~~~~~Gi-----~~ivi~t~-G~~e~~~~~l~~~a~~~~g-i~-viGPn 158 (331)
|+..+.+.+.+|+++|+ +.|++=.+ ..+.++.++|.+++ +++| +. .+|.+
T Consensus 117 p~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a-~~~g~~~~~v~~~ 174 (479)
T 2nvw_A 117 KVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSIS-QQRANLQTIICLQ 174 (479)
T ss_dssp CHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHH-HTCTTCEEEEECG
T ss_pred CcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHH-HHcCCeEEEEEec
Confidence 99999999999999992 44455332 45567788888888 6777 65 44544
No 70
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.69 E-value=2.7e-08 Score=98.14 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=89.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-ce------ecC---ccccc----CHHHhhhcCCCCEEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE------HLG---LPVFN----TVAEAKAETKANASA 104 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~~------i~G---~p~y~----sl~dl~~~~~iDlai 104 (331)
.+.++|+|||+ |.+|+.+++.+.+. ++++++.+|+.... +. ..| .++|. +++++.++.++|+++
T Consensus 18 ~~~~rvgiIG~-G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~ 96 (444)
T 2ixa_A 18 PKKVRIAFIAV-GLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVF 96 (444)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEE
T ss_pred CCCceEEEEec-CHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEE
Confidence 35689999999 99999999988875 78899888876521 11 124 57898 999999866799999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecC-CCChhHHHHHHHHHhccCCcE-EEccCC
Q 020101 105 IYVPPPFAAAAILEAMEAELDLVVCITE-GIPQHDMVRVKAALNNQSKTR-LVGPNC 159 (331)
Q Consensus 105 i~vp~~~~~~~v~~~~~~Gi~~ivi~t~-G~~e~~~~~l~~~a~~~~gi~-viGPnc 159 (331)
|++|+..+.+.+.+|+++|.+. ++=-+ ..+.++.++|.+.+ +++|+. .++.|.
T Consensus 97 i~tp~~~h~~~~~~al~aGkhV-~~EKP~a~~~~ea~~l~~~a-~~~g~~~~v~~~~ 151 (444)
T 2ixa_A 97 VSSPWEWHHEHGVAAMKAGKIV-GMEVSGAITLEECWDYVKVS-EQTGVPLMALENV 151 (444)
T ss_dssp ECCCGGGHHHHHHHHHHTTCEE-EECCCCCSSHHHHHHHHHHH-HHHCCCEEECCGG
T ss_pred EcCCcHHHHHHHHHHHHCCCeE-EEeCCCcCCHHHHHHHHHHH-HHhCCeEEEEecc
Confidence 9999999999999999999875 43222 34567788888887 666754 556553
No 71
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.69 E-value=2.4e-08 Score=94.65 Aligned_cols=113 Identities=12% Similarity=0.015 Sum_probs=85.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~ 119 (331)
+.+||+|+|+ |+||+.+++.+.+. ++++++.+|++...+.-.|+++|.+++++.. ++|++++++|+..+.+.+..|
T Consensus 2 ~~irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~--~~DvViiatp~~~h~~~~~~a 78 (320)
T 1f06_A 2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHAD--DVDVLFLCMGSATDIPEQAPK 78 (320)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTT--TCSEEEECSCTTTHHHHHHHH
T ss_pred CCCEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhc--CCCEEEEcCCcHHHHHHHHHH
Confidence 4689999998 99999999998876 6888888877642111136788899998874 799999999999999999999
Q ss_pred HHcCCcEEEEecC-CCChhHH-HHHHHHHhccCC-cEEEccC
Q 020101 120 MEAELDLVVCITE-GIPQHDM-VRVKAALNNQSK-TRLVGPN 158 (331)
Q Consensus 120 ~~~Gi~~ivi~t~-G~~e~~~-~~l~~~a~~~~g-i~viGPn 158 (331)
+++|++. ++-++ +.+.++. ++|.+.+ ++++ +.++..+
T Consensus 79 l~aG~~V-v~ekp~~~~~~~~~~~l~~~a-~~~~~v~v~~~~ 118 (320)
T 1f06_A 79 FAQFACT-VDTYDNHRDIPRHRQVMNEAA-TAAGNVALVSTG 118 (320)
T ss_dssp HTTTSEE-ECCCCCGGGHHHHHHHHHHHH-HHHTCEEECSCS
T ss_pred HHCCCEE-EECCCCcCCHHHHHHHHHHHH-HhCCCEEEEecC
Confidence 9999876 44444 4555665 7777777 5555 4555543
No 72
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.67 E-value=1.7e-08 Score=97.25 Aligned_cols=118 Identities=12% Similarity=0.074 Sum_probs=86.3
Q ss_pred CCCeEEEEEcCCCCCCcH-HH----HHHHHcC-CeEE---------EEeCCCCCC-c---eecCcc-cccCHHHhhhcCC
Q 020101 40 DKNTRVICQGITGKNGTF-HT----EQAIEYG-TKMV---------GGVTPKKGG-T---EHLGLP-VFNTVAEAKAETK 99 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~-~~----~~l~~~g-~~iv---------~~VnP~~~g-~---~i~G~p-~y~sl~dl~~~~~ 99 (331)
++.++|+|||+.|.+|+. ++ +.+.+.+ ..++ +.+++.... + +..|++ +|.+++++.++.+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~ 83 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKN 83 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCC
Confidence 567999999966999987 77 6666643 3321 456655411 1 136775 8999999998777
Q ss_pred CCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcE-EEccC
Q 020101 100 ANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVGPN 158 (331)
Q Consensus 100 iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~-viGPn 158 (331)
+|++++++|+..+.+.+.+|+++|++.++--.-..+.++..+|.+.+ +++|+. .++.|
T Consensus 84 iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a-~~~~~~~~v~~~ 142 (383)
T 3oqb_A 84 DTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLA-NSKGVKHGTVQD 142 (383)
T ss_dssp CCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHH-HHTTCCEEECCG
T ss_pred CCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHH-HHcCCeEEEEec
Confidence 99999999999999999999999988532112245677888888888 677754 55554
No 73
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.64 E-value=3e-08 Score=94.09 Aligned_cols=109 Identities=12% Similarity=0.132 Sum_probs=82.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC--Ccee------cC--cccccCHHHhhhcCCCCEEEEecChhh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG--GTEH------LG--LPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~--g~~i------~G--~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
.+||+|||+ |.++..+++.+ ..++++++.+++... .+.. .| .++|.+++++.++.++|+++|+||+..
T Consensus 2 ~~rvgiiG~-G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 2 SLKICVIGS-SGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSL 79 (337)
T ss_dssp CEEEEEECS-SSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHH
T ss_pred ceEEEEEcc-chhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcch
Confidence 378999999 77777777777 557899988887541 1111 24 479999999988667999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 112 AAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+.+.+.+|+++|.+.++=-.-..+.++.++|.+++ +++|..
T Consensus 80 H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~ 120 (337)
T 3ip3_A 80 NGKILLEALERKIHAFVEKPIATTFEDLEKIRSVY-QKVRNE 120 (337)
T ss_dssp HHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH-HHHTTT
T ss_pred HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH-HHhCCc
Confidence 99999999999988532112245667888888887 666654
No 74
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.49 E-value=8.7e-08 Score=94.79 Aligned_cols=113 Identities=15% Similarity=0.050 Sum_probs=83.4
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCc-e---ec-C----------------------cccccC
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT-E---HL-G----------------------LPVFNT 90 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~-~---i~-G----------------------~p~y~s 90 (331)
..+.++|+|||+ |++|+.+++.+.+. ++++++..|++.... . .. | .++|.+
T Consensus 20 ~~k~IRVGIIGa-G~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 20 TGKPIRIGLIGA-GEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp TTCCEEEEEECC-SHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred cCCceEEEEECC-hHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 356799999999 99999998887764 788888877764211 0 11 3 457899
Q ss_pred HHHhhhcCCCCEEEEecCh-hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEE
Q 020101 91 VAEAKAETKANASAIYVPP-PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRL 154 (331)
Q Consensus 91 l~dl~~~~~iDlaii~vp~-~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~v 154 (331)
++++.+..++|+++++||. +.+.+.+.+|+++|.+.+ +.......++..+|.+.| +++|+.+
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv-~~nk~l~~~eg~eL~~~A-~e~Gvvl 161 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLV-MMNVEADVTIGPYLKAQA-DKQGVIY 161 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEE-ECCHHHHHHHHHHHHHHH-HHHTCCE
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEE-ecCcccCHHHHHHHHHHH-HHhCCee
Confidence 9999987789999999975 678999999999998874 333333234456777776 6676543
No 75
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.46 E-value=1.3e-05 Score=79.48 Aligned_cols=251 Identities=13% Similarity=0.172 Sum_probs=149.9
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecC----hhhHHHHHHHH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP----PPFAAAAILEA 119 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp----~~~~~~~v~~~ 119 (331)
+|++|.-||.+++.++..+.+.|.-+-..|.-.. + .++..-+-++-+.++++.++++++.- +..-.++++.+
T Consensus 151 ~v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~--~--~~~~~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f~~~a~~~ 226 (457)
T 2csu_A 151 NVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--M--ADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRV 226 (457)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCEESEEEECTT--C--CSSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCC--c--CCCCHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHHHHHh
Confidence 4788999988888888888877654333444433 2 13322222444444456788887753 45566666666
Q ss_pred HHcCCcEEEEecCCCChhHH-------------HHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEEE
Q 020101 120 MEAELDLVVCITEGIPQHDM-------------VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIV 186 (331)
Q Consensus 120 ~~~Gi~~ivi~t~G~~e~~~-------------~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~vali 186 (331)
..+.+. +.+-.|-++... .+....+-|+.|+..+- +---+.. ....+.- ..++-++|+++
T Consensus 227 -~~~KPV-v~~k~G~~~~g~~aa~~Htgalag~~~~~~AafRqaGv~~v~-~~~El~~---~~~~l~~-~~~~g~rvaii 299 (457)
T 2csu_A 227 -TKKKPI-IALKAGKSESGARAASSHTGSLAGSWKIYEAAFKQSGVLVAN-TIDEMLS---MARAFSQ-PLPRGNKVAIM 299 (457)
T ss_dssp -HHHSCE-EEEECC------------------CHHHHHHHHHHTTCEEES-SHHHHHH---HHTTTTS-CCCSSSEEEEE
T ss_pred -cCCCCE-EEEEcCCCccccchhhcccCccCCcHHHHHHHHHhCCCeEEC-CHHHHHH---HHHHhcC-CCCCCCcEEEE
Confidence 345454 556666544321 12222222667764321 1000111 0011111 22456789999
Q ss_pred ecChHHHHHHHHHHHhCCCCc---------------------eEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEcc
Q 020101 187 SRSGTLTYEAVFQTTAVGLGQ---------------------STCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEI 245 (331)
Q Consensus 187 sQSG~~~~~~~~~~~~~g~g~---------------------s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~ 245 (331)
+-||+++...++.+.+.|+-+ ...+-+|..++ .-.+.+.++-+.+||++++|++.+-.
T Consensus 300 tngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~-~~~~~~al~~~l~dp~vd~vlv~~~~ 378 (457)
T 2csu_A 300 TNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASAR-GEDYYRTAKLLLQDPNVDMLIAICVV 378 (457)
T ss_dssp ESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCC-HHHHHHHHHHHHHSTTCSEEEEEEEC
T ss_pred ECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCCCC-HHHHHHHHHHHhcCCCCCEEEEEccc
Confidence 999999999999999888763 23555555431 23467788899999999999987742
Q ss_pred --CC-Cc-HHHHHHHHHHhC---CCCCEEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHH
Q 020101 246 --GG-TA-EEDAAALIKESG---TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGA 318 (331)
Q Consensus 246 --~g-~~-~~~~~~f~~a~r---~~KPVvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~ 318 (331)
.| .. ...+..+.++++ .+|||++...+.+. .+...+.|+++|+...+++++-..
T Consensus 379 ~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~-------------------~~~~~~~L~~~Gip~~~spe~Av~ 439 (457)
T 2csu_A 379 PTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYV-------------------SEKAKELLEKNGIPTYERPEDVAS 439 (457)
T ss_dssp CCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTT-------------------THHHHHHHHTTTCCEESSHHHHHH
T ss_pred cccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcc-------------------hHHHHHHHHhCCCCccCCHHHHHH
Confidence 11 11 233445555443 67999996544221 123466789999999999999998
Q ss_pred HHHHHHH
Q 020101 319 AMLEVFK 325 (331)
Q Consensus 319 ~~~a~~~ 325 (331)
++.++++
T Consensus 440 al~~l~~ 446 (457)
T 2csu_A 440 AAYALVE 446 (457)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887654
No 76
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.41 E-value=5e-07 Score=85.00 Aligned_cols=110 Identities=8% Similarity=0.036 Sum_probs=79.7
Q ss_pred eEEEEEcCCCCCCc-HHHHHHHHc-CCeEEEEeCCCCCCc----eecCccc-ccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 43 TRVICQGITGKNGT-FHTEQAIEY-GTKMVGGVTPKKGGT----EHLGLPV-FNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 43 ~~VaIvGasgk~G~-~~~~~l~~~-g~~iv~~VnP~~~g~----~i~G~p~-y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
++|+|||+ |++|+ .+++.+.+. +++++ .+|++.... +..|++. |.+..++.. .++|++++++|+..+.+.
T Consensus 3 ~~igiIG~-G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~-~~~D~V~i~tp~~~h~~~ 79 (323)
T 1xea_A 3 LKIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATRYRVSATCTDYRDVLQ-YGVDAVMIHAATDVHSTL 79 (323)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHHTTCCCCCSSTTGGGG-GCCSEEEECSCGGGHHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHHcCCCccccCHHHHhh-cCCCEEEEECCchhHHHH
Confidence 68999999 99998 488888775 67888 888765211 1346664 554444442 379999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcE-EEc
Q 020101 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTR-LVG 156 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~-viG 156 (331)
+.+|+++|.+.++--....+.++.++|.+++ +++|+. .+|
T Consensus 80 ~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~ 120 (323)
T 1xea_A 80 AAFFLHLGIPTFVDKPLAASAQECENLYELA-EKHHQPLYVG 120 (323)
T ss_dssp HHHHHHTTCCEEEESCSCSSHHHHHHHHHHH-HHTTCCEEEE
T ss_pred HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHH-HhcCCeEEEe
Confidence 9999999988643222245667778888887 677765 444
No 77
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=98.38 E-value=1.9e-06 Score=82.07 Aligned_cols=158 Identities=15% Similarity=0.050 Sum_probs=103.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc---------CCeEEEEeCCCCCCcee-------------cCccccc--CHHHhhhc
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY---------GTKMVGGVTPKKGGTEH-------------LGLPVFN--TVAEAKAE 97 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~---------g~~iv~~VnP~~~g~~i-------------~G~p~y~--sl~dl~~~ 97 (331)
.++|+|+|+ |++|+.+++.+.+. ++++++..|++. ... ...+.|. +++++.++
T Consensus 2 mirvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~--~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~ 78 (327)
T 3do5_A 2 MIKIAIVGF-GTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKS--SISGDFSLVEALRMKRETGMLRDDAKAIEVVRS 78 (327)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSC--EEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHH
T ss_pred cEEEEEEec-cHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCCh--HhccccCHHHHHhhhccCccccCCCCHHHHhcC
Confidence 478999998 99999998877653 678998888764 211 1134666 89999887
Q ss_pred CCCCEEEEecChhhH----HHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC--Ccccc
Q 020101 98 TKANASAIYVPPPFA----AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECKIG 171 (331)
Q Consensus 98 ~~iDlaii~vp~~~~----~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~--~~~~~ 171 (331)
.++|+++++||++.+ .+.+.+|+++|++. ++-..+.-..+..+|.+.| +++|..+.-..+.|-..|. .++-.
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhV-v~~NKkpla~~~~eL~~~A-~~~g~~~~~ea~v~~g~Pii~~l~~~ 156 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHV-VTSNKGPLVAEFHGLMSLA-ERNGVRLMYEATVGGAMPVVKLAKRY 156 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEE-EECCSHHHHHHHHHHHHHH-HHTTCCEECGGGSSTTSCCHHHHHTT
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeE-EecCchhhHHHHHHHHHHH-HhhCCcEEEEEEeeecCHHHHHHHHH
Confidence 789999999999876 89999999999986 4322132123456787877 7888876644444444444 11111
Q ss_pred cCCCCCCCCCCEEEEe--cChHHHHHHHHHHHhCCCCceEEE
Q 020101 172 IMPGYIHKPGRIGIVS--RSGTLTYEAVFQTTAVGLGQSTCV 211 (331)
Q Consensus 172 ~~~~~~~~~G~valis--QSG~~~~~~~~~~~~~g~g~s~~v 211 (331)
...+.|.-|. .||+... ++....+.|..|+.++
T Consensus 157 ------l~~~~I~~I~GIlnGT~ny-ilt~m~~~g~~f~~~l 191 (327)
T 3do5_A 157 ------LALCEIESVKGIFNGTCNY-ILSRMEEERLPYEHIL 191 (327)
T ss_dssp ------TTTSCEEEEEEECCHHHHH-HHHHHHHHCCCHHHHH
T ss_pred ------hhCCCccEEEEEECCCcCc-chhhcCcCCcCHHHHH
Confidence 2335565554 3777544 5444444577777655
No 78
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.32 E-value=3.7e-07 Score=90.37 Aligned_cols=162 Identities=12% Similarity=0.052 Sum_probs=107.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHH----------cCCeEEEEeCCCCCCc-e-ecCcccccCHHHhhhcCCCCEEEEec
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIE----------YGTKMVGGVTPKKGGT-E-HLGLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~----------~g~~iv~~VnP~~~g~-~-i~G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
.|.++|+|+|+ |++|+.+++.+.+ .++++++.+|++.... . ..+.+.|.+++++.++.++|++++++
T Consensus 8 Mk~irIgIIG~-G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 8 MKPIHVGLLGL-GTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp CSCEEEEEECC-HHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECC
T ss_pred hCcccEEEECC-CHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcC
Confidence 46799999998 9999888766542 3567888888765211 1 23567899999999877899999999
Q ss_pred Ch-hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC--CcccccCCCCCCCCCCEE
Q 020101 108 PP-PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECKIGIMPGYIHKPGRIG 184 (331)
Q Consensus 108 p~-~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~--~~~~~~~~~~~~~~G~va 184 (331)
|+ +.+.+.+.+|+++|.+. ++-.+....++..+|.+.| +++|+.+.-..+.|-..|. .++- ....|.|+
T Consensus 87 p~~~~h~~~~~~AL~aGKhV-vtenkal~a~~~~eL~~~A-~~~gv~l~~Ea~V~~giPii~~Lre------lL~~~~Ig 158 (444)
T 3mtj_A 87 GGLEPARELVMQAIANGKHV-VTANKHLVAKYGNEIFAAA-QAKGVMVTFEAAVAGGIPIIKALRE------GLTANRIE 158 (444)
T ss_dssp CSSTTHHHHHHHHHHTTCEE-EECCHHHHHHHHHHHHHHH-HHHTCCEECGGGSSTTSCHHHHHHT------TTTTSCEE
T ss_pred CCchHHHHHHHHHHHcCCEE-EECCcccCHHHHHHHHHHH-HHhCCeEEEEEeeeCChHHHHHHHH------HHhCCCCc
Confidence 96 89999999999999886 4333333334567888887 7888776422222222332 1111 12345566
Q ss_pred EEe--cChHHHHHHHHHHHhCCCCceEEE
Q 020101 185 IVS--RSGTLTYEAVFQTTAVGLGQSTCV 211 (331)
Q Consensus 185 lis--QSG~~~~~~~~~~~~~g~g~s~~v 211 (331)
=|. -||+... ++....+.|..|+.++
T Consensus 159 ~I~GIlnGT~ny-ilt~m~~~g~~f~~~l 186 (444)
T 3mtj_A 159 WLAGIINGTSNF-ILSEMRDKGAAFDDVL 186 (444)
T ss_dssp EEEEECCHHHHH-HHHHHHHHCCCHHHHH
T ss_pred eEEEEEcCCccc-ccccCCCCCCCHHHHH
Confidence 554 3666554 3344444577777665
No 79
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.16 E-value=3.6e-06 Score=77.28 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=86.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~ 119 (331)
...++|+++|. |++|+.+++. . ++++++..+ ... .++ |+.+..+++++.. ++|+++-+.+++.+.+.+..+
T Consensus 10 ~~~~rV~i~G~-GaIG~~v~~~--~-~leLv~v~~-~k~-gel-gv~a~~d~d~lla--~pD~VVe~A~~~av~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGM-GNIGKKLVEL--G-NFEKIYAYD-RIS-KDI-PGVVRLDEFQVPS--DVSTVVECASPEAVKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECC-SHHHHHHHHH--S-CCSEEEEEC-SSC-CCC-SSSEECSSCCCCT--TCCEEEECSCHHHHHHHHHHH
T ss_pred cccceEEEECc-CHHHHHHHhc--C-CcEEEEEEe-ccc-ccc-CceeeCCHHHHhh--CCCEEEECCCHHHHHHHHHHH
Confidence 46789999999 9999999988 4 899887777 433 244 8888899999985 899999999999999999999
Q ss_pred HHcCCcEEEEecCC-CChhH-HHHHHHHHhccCCcEEEccC
Q 020101 120 MEAELDLVVCITEG-IPQHD-MVRVKAALNNQSKTRLVGPN 158 (331)
Q Consensus 120 ~~~Gi~~ivi~t~G-~~e~~-~~~l~~~a~~~~gi~viGPn 158 (331)
+++|+.. ++.+.| +.+.+ .++|.++| +++|-++..|.
T Consensus 81 L~aG~dv-v~~S~gaLad~~l~~~L~~aA-~~gg~~l~vpS 119 (253)
T 1j5p_A 81 LKNPVNY-IIISTSAFADEVFRERFFSEL-KNSPARVFFPS 119 (253)
T ss_dssp TTSSSEE-EECCGGGGGSHHHHHHHHHHH-HTCSCEEECCC
T ss_pred HHCCCCE-EEcChhhhcCHHHHHHHHHHH-HHCCCeEEecC
Confidence 9999997 446776 44333 46777777 88888886654
No 80
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=98.16 E-value=3.2e-06 Score=80.49 Aligned_cols=159 Identities=14% Similarity=0.000 Sum_probs=99.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc--------CCeEEEEeCCCCCC-ce-e-----------cCcc-ccc---CHHHhh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY--------GTKMVGGVTPKKGG-TE-H-----------LGLP-VFN---TVAEAK 95 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~--------g~~iv~~VnP~~~g-~~-i-----------~G~p-~y~---sl~dl~ 95 (331)
+.++|+|+|+ |++|+.+++.+.+. ++++++..|++... +. + .+++ .|. +++++.
T Consensus 5 ~~irvgIiG~-G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll 83 (331)
T 3c8m_A 5 KTINLSIFGL-GNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL 83 (331)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH
T ss_pred cEEeEEEEec-CHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh
Confidence 4689999999 99999998887653 36788888876521 01 1 1332 555 899988
Q ss_pred hcCCCCEEEEecChh----hHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC--Ccc
Q 020101 96 AETKANASAIYVPPP----FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECK 169 (331)
Q Consensus 96 ~~~~iDlaii~vp~~----~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~--~~~ 169 (331)
+.++|++++++|+. .+.+.+.+|+++|.+. ++...+.-.++..+|.+.| +++|+.+.-..+.|--.|. .+.
T Consensus 84 -~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhV-vtanK~pla~~~~eL~~~A-~~~gv~~~~ea~vg~giPii~~l~ 160 (331)
T 3c8m_A 84 -ARDFDIVVDATPASADGKKELAFYKETFENGKDV-VTANKSGLANFWPEIMEYA-RSNNRRIRYEATVAGGVPLFSFID 160 (331)
T ss_dssp -HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEE-EECCCHHHHHHHHHHHHHH-HHHTCCEECGGGSSTTSCCHHHHH
T ss_pred -CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeE-EecCchhhHHHHHHHHHHH-HHcCCEEEEEeecccccHHHHHHH
Confidence 66899999999995 8899999999999886 4322222124556777777 7788766433333333343 111
Q ss_pred cccCCCCCCCCCCEEEE--ecChHHHHHHHHHHHhCCCCceEEE
Q 020101 170 IGIMPGYIHKPGRIGIV--SRSGTLTYEAVFQTTAVGLGQSTCV 211 (331)
Q Consensus 170 ~~~~~~~~~~~G~vali--sQSG~~~~~~~~~~~~~g~g~s~~v 211 (331)
-.. ..+.|.-| -.+|+.. .+++.. +.|..|+.++
T Consensus 161 ~~l------~g~~I~~I~GI~nGT~n-yil~~m-~~g~~f~~~l 196 (331)
T 3c8m_A 161 YSV------LPSRIKKFRGIVSLTIN-YFIREL-ANKREFDDVL 196 (331)
T ss_dssp HHS------TTCCCCEEEEECCHHHH-HHHHHH-HTTCCHHHHH
T ss_pred HHh------hcCcccEEEEEEeccce-eEecch-hcCCCHHHHH
Confidence 111 22344443 2366664 344333 4566666554
No 81
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=98.11 E-value=5.4e-06 Score=68.16 Aligned_cols=89 Identities=10% Similarity=0.148 Sum_probs=67.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCC--CCceecCccccc--CHHHhhhcCCCCEEEEecChh---h
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK--GGTEHLGLPVFN--TVAEAKAETKANASAIYVPPP---F 111 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~--~g~~i~G~p~y~--sl~dl~~~~~iDlaii~vp~~---~ 111 (331)
++..+++|+|+ |..|+.+++.+.+. ||++++.+++.. .|..+.|+|++. ++.++.++.++|.+++++|.. .
T Consensus 2 ~~~~~vlIiGa-G~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~~~~~ 80 (141)
T 3nkl_A 2 NAKKKVLIYGA-GSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSASQVQ 80 (141)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCCCHHH
Confidence 35678999999 88999999988875 899998887654 345688999987 344443445799999999854 3
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 020101 112 AAAAILEAMEAELDLVVC 129 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~~ivi 129 (331)
..++++.|.+.|++..++
T Consensus 81 ~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 81 KKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp HHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHcCCeEEEC
Confidence 478889999999997543
No 82
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.06 E-value=1.9e-05 Score=74.37 Aligned_cols=112 Identities=11% Similarity=0.073 Sum_probs=76.4
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAA 115 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~ 115 (331)
++..+|+|||+ |+||..+.+.|.+.|++++ .+|+.... +. -.|+..+.+++++.+ +.|++++++|.. .+.++
T Consensus 29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~l~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~v 104 (320)
T 4dll_A 29 PYARKITFLGT-GSMGLPMARRLCEAGYALQ-VWNRTPARAASLAALGATIHEQARAAAR--DADIVVSMLENGAVVQDV 104 (320)
T ss_dssp CCCSEEEEECC-TTTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTTCEEESSHHHHHT--TCSEEEECCSSHHHHHHH
T ss_pred cCCCEEEEECc-cHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHCCCEeeCCHHHHHh--cCCEEEEECCCHHHHHHH
Confidence 34568999999 9999999999999999876 77776411 11 237788889999887 789999999964 55555
Q ss_pred HH--HHHH-cCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 116 IL--EAME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 116 v~--~~~~-~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+. ...+ ..-..+++-.+..+....+++.+.+ ++.|+.++.
T Consensus 105 ~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~-~~~g~~~~~ 147 (320)
T 4dll_A 105 LFAQGVAAAMKPGSLFLDMASITPREARDHAARL-GALGIAHLD 147 (320)
T ss_dssp HTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred HcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHH-HHcCCEEEe
Confidence 53 3333 2223334434444455555666655 567877664
No 83
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.05 E-value=5e-06 Score=79.06 Aligned_cols=159 Identities=17% Similarity=0.135 Sum_probs=100.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-------CCeEEEEeCCCCCC--ce-----------ecC-cc--cccCHHHhhhc
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-------GTKMVGGVTPKKGG--TE-----------HLG-LP--VFNTVAEAKAE 97 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-------g~~iv~~VnP~~~g--~~-----------i~G-~p--~y~sl~dl~~~ 97 (331)
|.++|+|+|+ |++|+.+++.+.+. ++++++..|.+... +. -.| ++ .| +..++..+
T Consensus 3 k~irVgIiG~-G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~ 80 (325)
T 3ing_A 3 KEIRIILMGT-GNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMG 80 (325)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTT
T ss_pred ceEEEEEEcC-cHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcC
Confidence 5689999998 99999999887763 46788887765410 00 012 22 23 66777766
Q ss_pred CCCCEEEEecChhh----HHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCC--Ccccc
Q 020101 98 TKANASAIYVPPPF----AAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPG--ECKIG 171 (331)
Q Consensus 98 ~~iDlaii~vp~~~----~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~--~~~~~ 171 (331)
.++|++++++|+.. +.+.+.+|+++|++. +.-..+.-.++..+|.+.| +++|..+.=.-+.|--.|- .++-.
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhV-VtaNK~~la~~~~eL~~lA-~~~g~~~~~Ea~vg~giPii~~l~~~ 158 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFESGMNV-VTANKSGLANKWHDIMDSA-NQNSKYIRYEATVAGGVPLFSVLDYS 158 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEE-EECCCHHHHHHHHHHHHHH-HHHTCCEECGGGSSTTSCCHHHHHHT
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHHCCCeE-EEcCchhHHHHHHHHHHHH-HHcCCeEEEEeeecccCHHHHHHHHH
Confidence 68999999999753 368899999999987 4333333235566788877 7888776544444433443 11111
Q ss_pred cCCCCCCCCCCEEEEe--cChHHHHHHHHHHHhCCCCceEEE
Q 020101 172 IMPGYIHKPGRIGIVS--RSGTLTYEAVFQTTAVGLGQSTCV 211 (331)
Q Consensus 172 ~~~~~~~~~G~valis--QSG~~~~~~~~~~~~~g~g~s~~v 211 (331)
...+.|.-|. .||+... +++.. +.|..|+.++
T Consensus 159 ------l~g~~I~~i~Gi~nGT~ny-il~~m-~~g~~f~~~l 192 (325)
T 3ing_A 159 ------ILPSKVKRFRGIVSSTINY-VIRNM-ANGRSLRDVV 192 (325)
T ss_dssp ------CTTCCEEEEEEECCHHHHH-HHHHH-HTTCCHHHHH
T ss_pred ------hhCCCeeEEEEEEEeeeeE-Eeecc-cCCCCHHHHH
Confidence 2235566654 5777543 44444 5666665444
No 84
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.99 E-value=1.7e-05 Score=73.20 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=76.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecC-hhhHHHHH--
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAI-- 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp-~~~~~~~v-- 116 (331)
++|+|||+ |+||..+.++|.+.|++++ .+|++...-+ -.|+..+.+++++.+ +.|++++++| +..+.+++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v~~~ 77 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVT-IWNRSPEKAEELAALGAERAATPCEVVE--SCPVTFAMLADPAAAEEVCFG 77 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSGGGGHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEE-EEcCCHHHHHHHHHCCCeecCCHHHHHh--cCCEEEEEcCCHHHHHHHHcC
Confidence 57899999 9999999999999999876 7777652111 247788889999887 6899999999 56677776
Q ss_pred -HHHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 -LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 -~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
++..+. .-..+++-.++.+....+++.+.+ ++.|+.++.
T Consensus 78 ~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~-~~~g~~~~~ 118 (287)
T 3pef_A 78 KHGVLEGIGEGRGYVDMSTVDPATSQRIGVAV-VAKGGRFLE 118 (287)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred cchHhhcCCCCCEEEeCCCCCHHHHHHHHHHH-HHhCCEEEE
Confidence 444432 222334444555566666666665 566777664
No 85
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.95 E-value=2e-05 Score=73.79 Aligned_cols=113 Identities=15% Similarity=0.120 Sum_probs=77.5
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChh-hHHH
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAA 114 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~ 114 (331)
..+..+|+|||+ |+||..+.++|.+.|++++ ..|++...-+ -.|+..+.+++++.+ +.|++++++|.. .+.+
T Consensus 18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~l~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~ 93 (310)
T 3doj_A 18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGFKVT-VWNRTLSKCDELVEHGASVCESPAEVIK--KCKYTIAMLSDPCAALS 93 (310)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSGGGGHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHH
T ss_pred cccCCEEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCeEcCCHHHHHH--hCCEEEEEcCCHHHHHH
Confidence 445678999999 9999999999999999876 6777652111 247788889999887 689999999975 4555
Q ss_pred HH---HHHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 115 AI---LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 115 ~v---~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
++ +.+... .-..+++-.+..+....+++.+.+ ++.|+.++.
T Consensus 94 v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~-~~~g~~~v~ 138 (310)
T 3doj_A 94 VVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAI-TGKGGRFVE 138 (310)
T ss_dssp HHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred HHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEe
Confidence 55 333322 222334444455555556666655 566877765
No 86
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.90 E-value=7.3e-05 Score=69.88 Aligned_cols=112 Identities=18% Similarity=0.173 Sum_probs=75.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHH--H
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAI--L 117 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v--~ 117 (331)
.||.+||. |+||....++|.+.||+++ +.|++...-+ -.|.....|+.|+.+ +.|++++++|++.+.+.+ .
T Consensus 6 ~kIgfIGL-G~MG~~mA~~L~~~G~~V~-v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~~dvvi~~l~~~~~~~~v~~~ 81 (297)
T 4gbj_A 6 EKIAFLGL-GNLGTPIAEILLEAGYELV-VWNRTASKAEPLTKLGATVVENAIDAIT--PGGIVFSVLADDAAVEELFSM 81 (297)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EC-------CTTTTTTCEECSSGGGGCC--TTCEEEECCSSHHHHHHHSCH
T ss_pred CcEEEEec-HHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHcCCeEeCCHHHHHh--cCCceeeeccchhhHHHHHHH
Confidence 36899999 9999999999999999976 5555431111 257788889999987 789999999987665432 2
Q ss_pred HHH-HcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE-ccCC
Q 020101 118 EAM-EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV-GPNC 159 (331)
Q Consensus 118 ~~~-~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi-GPnc 159 (331)
+.. ..+-..+|+-.+-.+.+..+++.+.+ +++|++++ .|-+
T Consensus 82 ~~~~~~~~~~iiid~sT~~p~~~~~~~~~~-~~~g~~~ldapVs 124 (297)
T 4gbj_A 82 ELVEKLGKDGVHVSMSTISPETSRQLAQVH-EWYGAHYVGAPIF 124 (297)
T ss_dssp HHHHHHCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEECCEE
T ss_pred HHHhhcCCCeEEEECCCCChHHHHHHHHHH-HhcCCceecCCcC
Confidence 222 22333345444445566677777776 67888876 4443
No 87
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.90 E-value=3.1e-05 Score=74.50 Aligned_cols=113 Identities=13% Similarity=0.118 Sum_probs=78.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhc-CCCCEEEEecChhhHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAE-TKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~-~~iDlaii~vp~~~~~~~v 116 (331)
+..+|+|||. |+||..+.++|.+.|++++ .+|++... +. -.|+..+.+++++.+. ..+|++++++|+..+.+++
T Consensus 21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~-v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 21 QSMQIGMIGL-GRMGADMVRRLRKGGHECV-VYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 4578999998 9999999999999999876 77776410 01 2477788899998763 2459999999999888888
Q ss_pred HHHHHcC-CcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 LEAMEAE-LDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 ~~~~~~G-i~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+.+...- -..+|+-.+.....+..++.+.+ ++.|+.+++
T Consensus 99 ~~l~~~l~~g~iiId~st~~~~~~~~~~~~l-~~~g~~~vd 138 (358)
T 4e21_A 99 QRMTPLLAANDIVIDGGNSHYQDDIRRADQM-RAQGITYVD 138 (358)
T ss_dssp HHHGGGCCTTCEEEECSSCCHHHHHHHHHHH-HTTTCEEEE
T ss_pred HHHHhhCCCCCEEEeCCCCChHHHHHHHHHH-HHCCCEEEe
Confidence 7765532 23334333333444555555555 577887764
No 88
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=97.89 E-value=0.00047 Score=68.72 Aligned_cols=256 Identities=16% Similarity=0.107 Sum_probs=141.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC--CceecCcccccCHHHhhhcCCCCEEEEecC---hhhHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG--GTEHLGLPVFNTVAEAKAETKANASAIYVP---PPFAAAAI 116 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~--g~~i~G~p~y~sl~dl~~~~~iDlaii~vp---~~~~~~~v 116 (331)
.=+|++|.-||.+++.++..+.+.|.-+-..|.-... .+++.++..-+-++-+.++++.++++++.- .....+.+
T Consensus 112 ~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~e~~~~~f~ 191 (480)
T 3dmy_A 112 EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIV 191 (480)
T ss_dssp EEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHHHHHH
T ss_pred CCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCCcHHHHHHH
Confidence 3468899999999998888887765443334443220 012445443333444445567888888872 12224455
Q ss_pred HHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCC-----CCCCCCCCEEEEecChH
Q 020101 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMP-----GYIHKPGRIGIVSRSGT 191 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~-----~~~~~~G~valisQSG~ 191 (331)
+.+-+.+.+. +++-.|-++.. . ++.|+..+- +.--+++...+ +...+ ...++-.++++||-||+
T Consensus 192 ~~ar~~~KPV-V~~k~Grs~~g-------~-r~~Gvirv~-~~~el~~~a~~-l~~~~~~~~~qp~~~G~rvaivtn~Gg 260 (480)
T 3dmy_A 192 NAMKATGKPT-VALFLGYTPAV-------A-RDENVWFAS-SLDEAARLACL-LSRVTARRNAIAPVSSGFICGLYTGGT 260 (480)
T ss_dssp HHHHHHCSCE-EEEETTCCCSS-------S-EETTEEEES-SHHHHHHHHHH-HHHHHHHHHHHCCCSCCEEEEEESCHH
T ss_pred HHHHhCCCCE-EEEEeCCCCcc-------c-ccCCEEEEC-CHHHHHHHHHH-HhcCccccccCCCCCCCeEEEEECCHH
Confidence 5554566554 55667765433 1 222221110 00000000000 00000 01134446999999999
Q ss_pred HHHHHHHHHHhCCCCce----------------EEEe-------cCCCCCC--CCCHHHHHHHhhcCCCccEEEE-EEcc
Q 020101 192 LTYEAVFQTTAVGLGQS----------------TCVG-------IGGDPFN--GTNFVDCVTKFIADPQTEGIIL-IGEI 245 (331)
Q Consensus 192 ~~~~~~~~~~~~g~g~s----------------~~vs-------~Gn~~~~--~v~~~d~l~~l~~Dp~T~~I~l-y~E~ 245 (331)
++....+.+.+ |+++. .... .||-.+. .-.+.+.++-+.+||++.+|++ |+-+
T Consensus 261 ~gvlaaD~~~~-gl~l~~ls~~t~~~l~~~~~~~l~~~lp~~~s~~NPvD~~d~~~~~~al~~~l~D~~vd~vlv~~v~~ 339 (480)
T 3dmy_A 261 LAAEAAGLLAG-HLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIG 339 (480)
T ss_dssp HHHHHHHHHHH-HTTCC---CCGGGEEEEETTEEEEETTSHHHHTTSCCTTTCCHHHHHHHHHGGGCTTEEEEEEEEECS
T ss_pred HHHHHHHHHHh-CCCCCCCCHHHHhhhhhhhhccHHHhCcchhhccCCcCCCCHHHHHHHHHHHhcCCCCCEEEEEeecC
Confidence 99999998877 66553 3333 4454310 1136788889999999998877 2311
Q ss_pred CC---Cc-HHHHHHHHHHhC-C--CCC--EEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHH
Q 020101 246 GG---TA-EEDAAALIKESG-T--EKP--IVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKI 316 (331)
Q Consensus 246 ~g---~~-~~~~~~f~~a~r-~--~KP--Vvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el 316 (331)
.+ ++ ..-++.+.++.+ . +|| ++++-.|.... . ...+.-.+.|+++|+..-+++++-
T Consensus 340 ~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~-~--------------~~~~~~~~~L~~aGIp~f~spe~A 404 (480)
T 3dmy_A 340 FGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERD-P--------------QCRSQQIATLEDAGIAVVSSLPEA 404 (480)
T ss_dssp TTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTS-T--------------TCHHHHHHHHHHTTCEECSSHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccc-h--------------hhHHHHHHHHHhCCCcccCCHHHH
Confidence 11 11 122233333333 3 799 44555554311 0 112234578999999999999998
Q ss_pred HHHHHHHH
Q 020101 317 GAAMLEVF 324 (331)
Q Consensus 317 ~~~~~a~~ 324 (331)
..++..++
T Consensus 405 v~a~~~l~ 412 (480)
T 3dmy_A 405 TLLAAALI 412 (480)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 88887665
No 89
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.89 E-value=1.8e-05 Score=76.13 Aligned_cols=112 Identities=12% Similarity=0.036 Sum_probs=79.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc----CCeEEEEeCCCCCCcee---c-CcccccCHHHhhhcC-----C-------
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY----GTKMVGGVTPKKGGTEH---L-GLPVFNTVAEAKAET-----K------- 99 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~----g~~iv~~VnP~~~g~~i---~-G~p~y~sl~dl~~~~-----~------- 99 (331)
++.++|+|+|+ |.+|+.+++.+.+. ++++++..|.+. ... + |++.|.+++++.++. +
T Consensus 2 ~k~i~vgIiG~-G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~ 78 (358)
T 1ebf_A 2 TKVVNVAVIGA-GVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAH 78 (358)
T ss_dssp CSEEEEEEECC-SHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHH
T ss_pred CceEEEEEEec-CHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHH
Confidence 45689999999 99999999998875 257887888543 222 1 677777777766532 2
Q ss_pred ------CCEEEEecChhhHHHHHHHHHHcCCcEEEEecCC-CC--hhHHHHHHHHHhccCCcEEEcc
Q 020101 100 ------ANASAIYVPPPFAAAAILEAMEAELDLVVCITEG-IP--QHDMVRVKAALNNQSKTRLVGP 157 (331)
Q Consensus 100 ------iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G-~~--e~~~~~l~~~a~~~~gi~viGP 157 (331)
+|+++++||...+.+...+|+++|.+. ++...+ ++ .++..+|. .| +++|+.+.=.
T Consensus 79 ~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhV-VtaNkkpla~~~~~~~eL~-~A-~~~gv~~~~E 142 (358)
T 1ebf_A 79 LKTSPKPVILVDNTSSAYIAGFYTKFVENGISI-ATPNKKAFSSDLATWKALF-SN-KPTNGFVYHE 142 (358)
T ss_dssp HTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEE-ECCCCGGGSSCHHHHHHHT-CC-CTTCCCEECG
T ss_pred hhhccCCcEEEEcCCChHHHHHHHHHHHCCCeE-EecCcccccCCHHHHHHHH-HH-HHcCCEEEEc
Confidence 379999999887777778999999886 432233 32 35566777 66 7888776433
No 90
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.88 E-value=8.4e-06 Score=78.12 Aligned_cols=114 Identities=13% Similarity=0.204 Sum_probs=72.8
Q ss_pred ccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEE-EEeCCCCCC---c--eecCccc--ccCHHHhhhcCCCCEEEEecC
Q 020101 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMV-GGVTPKKGG---T--EHLGLPV--FNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 37 ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv-~~VnP~~~g---~--~i~G~p~--y~sl~dl~~~~~iDlaii~vp 108 (331)
.+.-+++||+|+|| |.+|+.+++.|.+ .+++. +.++++... + ....+.+ ..++.++.. +.|++|.++|
T Consensus 11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~p 86 (365)
T 3abi_A 11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK--EFELVIGALP 86 (365)
T ss_dssp -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT--TCSEEEECCC
T ss_pred cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHh--CCCEEEEecC
Confidence 34456789999999 9999999988865 35543 234432100 0 1111122 234666665 7899999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCC
Q 020101 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNC 159 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc 159 (331)
+..+..+++.|+++|++. +-++ +..++..++.+.+ +++|+.++ |.|
T Consensus 87 ~~~~~~v~~~~~~~g~~y-vD~s--~~~~~~~~l~~~a-~~~g~~~i-~~~ 132 (365)
T 3abi_A 87 GFLGFKSIKAAIKSKVDM-VDVS--FMPENPLELRDEA-EKAQVTIV-FDA 132 (365)
T ss_dssp GGGHHHHHHHHHHHTCEE-EECC--CCSSCGGGGHHHH-HHTTCEEE-CCC
T ss_pred CcccchHHHHHHhcCcce-Eeee--ccchhhhhhhhhh-ccCCceee-ecC
Confidence 999999999999999997 3333 3333344555666 78888877 454
No 91
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.86 E-value=6.6e-05 Score=69.47 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=72.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC---eEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT---KMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~---~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
..+|+|||+ |+||+.+.+.+.+.|+ +++ ..|++... + +..|+.++.+..++.+ +.|++++++|++...+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~-v~dr~~~~~~~l~~~~gi~~~~~~~~~~~--~aDvVilav~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRIC-VTNRSLDKLDFFKEKCGVHTTQDNRQGAL--NADVVVLAVKPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEE-EECSSSHHHHHHHHTTCCEEESCHHHHHS--SCSEEEECSCGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEE-EEeCCHHHHHHHHHHcCCEEeCChHHHHh--cCCeEEEEeCHHHHHH
Confidence 356889999 9999999999999888 665 77876521 0 1248888888888876 7899999999999999
Q ss_pred HHHHHHHc--CCc-EEEEecCCCChhHHH
Q 020101 115 AILEAMEA--ELD-LVVCITEGIPQHDMV 140 (331)
Q Consensus 115 ~v~~~~~~--Gi~-~ivi~t~G~~e~~~~ 140 (331)
+++++... .-+ .++-.+.|++.+..+
T Consensus 79 vl~~l~~~~l~~~~iiiS~~agi~~~~l~ 107 (280)
T 3tri_A 79 VCEELKDILSETKILVISLAVGVTTPLIE 107 (280)
T ss_dssp HHHHHHHHHHTTTCEEEECCTTCCHHHHH
T ss_pred HHHHHHhhccCCCeEEEEecCCCCHHHHH
Confidence 99887653 334 555567899755443
No 92
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.84 E-value=5.6e-05 Score=70.07 Aligned_cols=110 Identities=12% Similarity=0.138 Sum_probs=73.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAIL 117 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v~ 117 (331)
..+|+|||+ |+||..+.+.|.+.|++++ .+|++... +. -.|+..+.+++++.+ +.|++++++|.. .+.+++.
T Consensus 3 m~~I~iiG~-G~mG~~~a~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v~~ 78 (302)
T 2h78_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLN-VFDLVQSAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGLYL 78 (302)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHTTCEECSSHHHHHT--TCSEEEECCSCHHHHHHHHH
T ss_pred CCEEEEEee-cHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHCCCeEcCCHHHHHh--CCCeEEEECCCHHHHHHHHc
Confidence 467999999 9999999999999999876 77776410 01 247888889999887 789999999854 4555554
Q ss_pred ---HHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 118 ---EAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 118 ---~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+..+. .-..+++-.+.......+++.+.+ ++.|+.++.
T Consensus 79 ~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~-~~~g~~~~~ 120 (302)
T 2h78_A 79 DDDGLLAHIAPGTLVLECSTIAPTSARKIHAAA-RERGLAMLD 120 (302)
T ss_dssp SSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHH-HHTTCCEEE
T ss_pred CchhHHhcCCCCcEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 33332 223334433444445555566655 456766553
No 93
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.84 E-value=8.4e-05 Score=69.06 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=75.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecCh-hhHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAIL 117 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~-~~~~~~v~ 117 (331)
..+|+|||+ |+||..+.++|.+.|++++ .+|++... +. -.|+....+++++.+ .|++++++|. ..+.++++
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~ 89 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVT-VYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVG 89 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEE-EECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHH
Confidence 356899999 9999999999999999876 66665421 11 247788889999874 7999999995 46666776
Q ss_pred HHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 118 EAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 118 ~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+..+. .-..+++-.+..+....+++.+.+ ++.|+.++.
T Consensus 90 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~-~~~g~~~~~ 128 (296)
T 3qha_A 90 ELAGHAKPGTVIAIHSTISDTTAVELARDL-KARDIHIVD 128 (296)
T ss_dssp HHHTTCCTTCEEEECSCCCHHHHHHHHHHH-GGGTCEEEE
T ss_pred HHHHhcCCCCEEEEeCCCCHHHHHHHHHHH-HHcCCEEEe
Confidence 66553 223334444445555556666665 566777664
No 94
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.83 E-value=3.1e-05 Score=72.69 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=78.0
Q ss_pred cCCCCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCC--CCc---eecCcccccCHHHhhhcCCCCEEEEecChhh
Q 020101 38 FVDKNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKK--GGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 38 l~~k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~--~g~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
+.++..+|+|||+ |+||..+.+.|.+.|+ +++ .+|++. ... ...|+..+.+++++.+ +.|++++++|+..
T Consensus 20 ~~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~-~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 20 FQSNAMKLGFIGF-GEAASAIASGLRQAGAIDMA-AYDAASAESWRPRAEELGVSCKASVAEVAG--ECDVIFSLVTAQA 95 (312)
T ss_dssp -----CEEEEECC-SHHHHHHHHHHHHHSCCEEE-EECSSCHHHHHHHHHHTTCEECSCHHHHHH--HCSEEEECSCTTT
T ss_pred ccCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEE-EEcCCCCHHHHHHHHHCCCEEeCCHHHHHh--cCCEEEEecCchh
Confidence 3455678999999 9999999999999999 665 777741 101 1247788889999877 6899999999999
Q ss_pred HHHHHHHHHHcC-CcEEEEecCCCChhHHHHHHHHHhccC--CcEEEcc
Q 020101 112 AAAAILEAMEAE-LDLVVCITEGIPQHDMVRVKAALNNQS--KTRLVGP 157 (331)
Q Consensus 112 ~~~~v~~~~~~G-i~~ivi~t~G~~e~~~~~l~~~a~~~~--gi~viGP 157 (331)
..+++++....- -..+++-.+..+....+++.+.+ ++. |+.++.+
T Consensus 96 ~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~-~~~~~g~~~vd~ 143 (312)
T 3qsg_A 96 ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVI-SRHRPSAQYAAV 143 (312)
T ss_dssp HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHH-HHHCTTCEEEEE
T ss_pred HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHH-HhhcCCCeEEec
Confidence 998887776532 23344444455555555555544 344 6676643
No 95
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.81 E-value=3.6e-05 Score=71.99 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=74.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAIL 117 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v~ 117 (331)
..+|+|||+ |+||..+.++|.+.|++++ ..|++... +. -.|...+.+++++.+ +.|++++++|... +.+++.
T Consensus 9 ~~~IgiIG~-G~mG~~~A~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 9 EFDVSVIGL-GAMGTIMAQVLLKQGKRVA-IWNRSPGKAAALVAAGAHLCESVKAALS--ASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp SCSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTCEECSSHHHHHH--HSSEEEECCSSHHHHHHHHT
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHCCCeecCCHHHHHh--cCCEEEEEeCCHHHHHHHhc
Confidence 456889999 9999999999999999876 67776410 01 247778889999887 6899999999765 555553
Q ss_pred --HHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 118 --EAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 118 --~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
.+....-..+++-.+..+....+++.+.+ ++.|+.++.
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~-~~~g~~~vd 124 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLV-NQAGGHYVK 124 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHH-HHTTCEEEE
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHH-HHcCCeEEe
Confidence 22222222334434444455556666655 567877664
No 96
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.81 E-value=3.7e-05 Score=69.56 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=69.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC----CeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG----TKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g----~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
.+|+|||+ |+||+.+.+.|.+.| ++++ .+|++. +. .|+.++.+.+++.+ +.|++++++|+..+.+++++
T Consensus 5 m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~-~~~~~~--~~-~g~~~~~~~~~~~~--~~D~vi~~v~~~~~~~v~~~ 77 (262)
T 2rcy_A 5 IKLGFMGL-GQMGSALAHGIANANIIKKENLF-YYGPSK--KN-TTLNYMSSNEELAR--HCDIIVCAVKPDIAGSVLNN 77 (262)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHTSSCGGGEE-EECSSC--CS-SSSEECSCHHHHHH--HCSEEEECSCTTTHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCCCCCeEE-EEeCCc--cc-CceEEeCCHHHHHh--cCCEEEEEeCHHHHHHHHHH
Confidence 46899999 999999999998888 5665 777765 23 68888888888776 68999999999999998887
Q ss_pred HHHc-CCcEEEEecCCCChhH
Q 020101 119 AMEA-ELDLVVCITEGIPQHD 138 (331)
Q Consensus 119 ~~~~-Gi~~ivi~t~G~~e~~ 138 (331)
+... .-+.++..+.|++.+.
T Consensus 78 l~~~l~~~~vv~~~~gi~~~~ 98 (262)
T 2rcy_A 78 IKPYLSSKLLISICGGLNIGK 98 (262)
T ss_dssp SGGGCTTCEEEECCSSCCHHH
T ss_pred HHHhcCCCEEEEECCCCCHHH
Confidence 6543 2345666778887654
No 97
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.78 E-value=0.00012 Score=67.32 Aligned_cols=107 Identities=15% Similarity=0.120 Sum_probs=70.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChhhH-HHHHH-
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFA-AAAIL- 117 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~-~~~v~- 117 (331)
++|+|||+ |++|+.+.+.|.+.|++++ .+| +... +. -.|+..+.+++++.+ +.|++++++|.... ..++.
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~-~~~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~vp~~~~~~~v~~~ 78 (295)
T 1yb4_A 4 MKLGFIGL-GIMGSPMAINLARAGHQLH-VTT-IGPVADELLSLGAVNVETARQVTE--FADIIFIMVPDTPQVEDVLFG 78 (295)
T ss_dssp CEEEECCC-STTHHHHHHHHHHTTCEEE-ECC-SSCCCHHHHTTTCBCCSSHHHHHH--TCSEEEECCSSHHHHHHHHHS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCEEE-EEc-CHHHHHHHHHcCCcccCCHHHHHh--cCCEEEEECCCHHHHHHHHhC
Confidence 57899998 9999999999998899865 566 4311 11 137778889999877 79999999988774 45554
Q ss_pred --HHHH-cCCcE-EEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 118 --EAME-AELDL-VVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 118 --~~~~-~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+... ..-.. ++..+++ .....+++.+.+ ++.+++++.
T Consensus 79 ~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~-~~~g~~~~~ 119 (295)
T 1yb4_A 79 EHGCAKTSLQGKTIVDMSSI-SPIETKRFAQRV-NEMGADYLD 119 (295)
T ss_dssp TTSSTTSCCTTEEEEECSCC-CHHHHHHHHHHH-HTTTEEEEE
T ss_pred chhHhhcCCCCCEEEECCCC-CHHHHHHHHHHH-HHcCCeEEE
Confidence 2222 12223 3334555 334445566655 456777763
No 98
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.76 E-value=2.6e-05 Score=70.68 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=68.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL 117 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~ 117 (331)
.++|+|||+ |+||+.+.+.+.+.|+++. .+|++... +. ..|+..+.+++++.+ ++|++++++|++.+.++++
T Consensus 3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~D~Vi~~v~~~~~~~v~~ 78 (259)
T 2ahr_A 3 AMKIGIIGV-GKMASAIIKGLKQTPHELI-ISGSSLERSKEIAEQLALPYAMSHQDLID--QVDLVILGIKPQLFETVLK 78 (259)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTSSCEEE-EECSSHHHHHHHHHHHTCCBCSSHHHHHH--TCSEEEECSCGGGHHHHHT
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEE-EECCCHHHHHHHHHHcCCEeeCCHHHHHh--cCCEEEEEeCcHhHHHHHH
Confidence 468999998 9999999999988887654 77776411 11 237888889999877 7999999999998888887
Q ss_pred HHHHcCCcEEEEecCCCChhHH
Q 020101 118 EAMEAELDLVVCITEGIPQHDM 139 (331)
Q Consensus 118 ~~~~~Gi~~ivi~t~G~~e~~~ 139 (331)
++. .|. .++..+.|++.+..
T Consensus 79 ~l~-~~~-~vv~~~~~~~~~~l 98 (259)
T 2ahr_A 79 PLH-FKQ-PIISMAAGISLQRL 98 (259)
T ss_dssp TSC-CCS-CEEECCTTCCHHHH
T ss_pred Hhc-cCC-EEEEeCCCCCHHHH
Confidence 653 443 44445568876543
No 99
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.75 E-value=6.2e-05 Score=69.39 Aligned_cols=109 Identities=15% Similarity=0.085 Sum_probs=73.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH--
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI-- 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v-- 116 (331)
.+|+|||+ |+||..+.++|.+.|++++ ..|++...-+ -.|.....+++++.+ +.|++++++|.. .+.+++
T Consensus 2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~~~~--~advvi~~v~~~~~~~~v~~~ 77 (287)
T 3pdu_A 2 TTYGFLGL-GIMGGPMAANLVRAGFDVT-VWNRNPAKCAPLVALGARQASSPAEVCA--ACDITIAMLADPAAAREVCFG 77 (287)
T ss_dssp CCEEEECC-STTHHHHHHHHHHHTCCEE-EECSSGGGGHHHHHHTCEECSCHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCeEE-EEcCCHHHHHHHHHCCCeecCCHHHHHH--cCCEEEEEcCCHHHHHHHHcC
Confidence 35889998 9999999999999999876 6676652111 247778889999887 689999999986 555555
Q ss_pred -HHHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 -LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 -~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+...+. .-..+++-++..+....+++.+.+ ++.|+.++.
T Consensus 78 ~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~-~~~g~~~~~ 118 (287)
T 3pdu_A 78 ANGVLEGIGGGRGYIDMSTVDDETSTAIGAAV-TARGGRFLE 118 (287)
T ss_dssp TTCGGGTCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred chhhhhcccCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 333332 122334434444555555666655 566777664
No 100
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.74 E-value=4.2e-05 Score=72.22 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=69.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHH-c-CCeEEEEeCCCCCC--ce---ecCccc-ccCHHHhhhc---CCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIE-Y-GTKMVGGVTPKKGG--TE---HLGLPV-FNTVAEAKAE---TKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~-~-g~~iv~~VnP~~~g--~~---i~G~p~-y~sl~dl~~~---~~iDlaii~vp~ 109 (331)
+.++|+|||+ |.+|+.+++.+.+ . +.++++.+++.... .. ..|.+. +.+++++.++ .++|++++++|+
T Consensus 3 ~~irVaIIG~-G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 3 QKLKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp SCEEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 4689999996 9999999998865 4 67888777766421 12 356664 5678888653 469999999999
Q ss_pred hhHHHHHHHHHHc--CCcEEEEecC
Q 020101 110 PFAAAAILEAMEA--ELDLVVCITE 132 (331)
Q Consensus 110 ~~~~~~v~~~~~~--Gi~~ivi~t~ 132 (331)
+.+.+.+.+++++ |.+. ++.++
T Consensus 82 ~~h~~~a~~al~a~~Gk~V-i~ekp 105 (312)
T 1nvm_B 82 SAHVQNEALLRQAKPGIRL-IDLTP 105 (312)
T ss_dssp HHHHHHHHHHHHHCTTCEE-EECST
T ss_pred HHHHHHHHHHHHhCCCCEE-EEcCc
Confidence 9999999999999 9886 54444
No 101
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.74 E-value=3.7e-05 Score=69.89 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=69.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
++|+|||+ |+||+.+.+.+.+.|++++..+|++... + +..|+..+.+++++.+ +.|++++++|+..+.+++++
T Consensus 11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~Dvvi~av~~~~~~~v~~~ 87 (266)
T 3d1l_A 11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNP--YAKLYIVSLKDSAFAELLQG 87 (266)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCS--CCSEEEECCCHHHHHHHHHH
T ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhc--CCCEEEEecCHHHHHHHHHH
Confidence 57899999 9999999999988899855578876410 0 1137778888888776 79999999999998888887
Q ss_pred HHHc--CCcEEEEecCCCChhH
Q 020101 119 AMEA--ELDLVVCITEGIPQHD 138 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G~~e~~ 138 (331)
+... .=+.++..++|++.+.
T Consensus 88 l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp HHTTCCTTCEEEECCTTSCGGG
T ss_pred HHhhcCCCcEEEECCCCCchHH
Confidence 7652 1134555777887554
No 102
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.73 E-value=0.00011 Score=67.69 Aligned_cols=107 Identities=12% Similarity=0.194 Sum_probs=71.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecC-hhhHHHHH--
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAI-- 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp-~~~~~~~v-- 116 (331)
++|+|||+ |.+|+.+.+.+.+.|++++ .+|++... +. -.|+..+.+++++.+ +.|++++++| +.....++
T Consensus 6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~v~~~~~~~~~~~~ 81 (299)
T 1vpd_A 6 MKVGFIGL-GIMGKPMSKNLLKAGYSLV-VSDRNPEAIADVIAAGAETASTAKAIAE--QCDVIITMLPNSPHVKEVALG 81 (299)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred ceEEEECc-hHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHCCCeecCCHHHHHh--CCCEEEEECCCHHHHHHHHhC
Confidence 47999998 9999999999999899865 77765410 11 137778889988776 6899999999 45555555
Q ss_pred -HHHH---HcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 -LEAM---EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 -~~~~---~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
++.. ..| +.++..++|.+ ...+++.+.+ .+.|+.++.
T Consensus 82 ~~~l~~~l~~~-~~vv~~s~~~~-~~~~~l~~~~-~~~g~~~~~ 122 (299)
T 1vpd_A 82 ENGIIEGAKPG-TVLIDMSSIAP-LASREISDAL-KAKGVEMLD 122 (299)
T ss_dssp TTCHHHHCCTT-CEEEECSCCCH-HHHHHHHHHH-HTTTCEEEE
T ss_pred cchHhhcCCCC-CEEEECCCCCH-HHHHHHHHHH-HHcCCeEEE
Confidence 2332 233 24454555653 3344555555 456777664
No 103
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=97.73 E-value=0.00018 Score=70.14 Aligned_cols=123 Identities=21% Similarity=0.295 Sum_probs=93.7
Q ss_pred CCCCEEEEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccC-CCcHHHHHHHH
Q 020101 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIG-GTAEEDAAALI 257 (331)
Q Consensus 179 ~~G~valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~-g~~~~~~~~f~ 257 (331)
..|+|++|+-+|+++...++.+...|.....++-+|+.+. .-.+.+.++-+.+||++++|++.+=+. -+...-++...
T Consensus 246 l~g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~-~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~ 324 (397)
T 3ufx_B 246 LDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGAK-ADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVI 324 (397)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCCC-HHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHH
T ss_pred CCCcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCCC-HHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 4699999999999999999999999999999999999862 446788888899999999999865432 11133455666
Q ss_pred HHhC---CCCCEEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEeCCHhHHHHHHHH
Q 020101 258 KESG---TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLE 322 (331)
Q Consensus 258 ~a~r---~~KPVvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v~~~~el~~~~~a 322 (331)
++++ .+||||+.-.|.. .+.-...|++.|+...+|+++-..++.+
T Consensus 325 ~a~~~~~~~kPvvv~~~G~~--------------------~~~~~~~l~~~gip~~~~~e~Aa~~~~~ 372 (397)
T 3ufx_B 325 RALEEGLLTKPVVMRVAGTA--------------------EEEAKKLLEGKPVYMYPTSIEAAKVTVA 372 (397)
T ss_dssp HHHTTTCCCSCEEEEEEEEC--------------------HHHHHHHTTTSSEEECSSHHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEEccCCC--------------------HHHHHHHHHhCCCcccCCHHHHHHHHHH
Confidence 6666 3799999887741 2233457888998888888776666544
No 104
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.71 E-value=8.2e-05 Score=68.43 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=72.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-ce--ecCc--ccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-TE--HLGL--PVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~~--i~G~--p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
..+|+|||+ |+||..+.+.+.+. +++++ .+|++... +. -.|. ..+.+++++.+ +.|++++++|+....+
T Consensus 6 ~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~--~aDvVilavp~~~~~~ 81 (290)
T 3b1f_A 6 EKTIYIAGL-GLIGASLALGIKRDHPHYKIV-GYNRSDRSRDIALERGIVDEATADFKVFAA--LADVIILAVPIKKTID 81 (290)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEE-EECSSHHHHHHHHHTTSCSEEESCTTTTGG--GCSEEEECSCHHHHHH
T ss_pred cceEEEEee-CHHHHHHHHHHHhCCCCcEEE-EEcCCHHHHHHHHHcCCcccccCCHHHhhc--CCCEEEEcCCHHHHHH
Confidence 357999998 99999999998876 56765 77775410 11 1344 34567777665 6899999999999999
Q ss_pred HHHHHHHc--CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 115 AILEAMEA--ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 115 ~v~~~~~~--Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+++++... .-..+++..++......+++.+.. .+.++++++
T Consensus 82 v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l-~~~~~~~v~ 124 (290)
T 3b1f_A 82 FIKILADLDLKEDVIITDAGSTKYEIVRAAEYYL-KDKPVQFVG 124 (290)
T ss_dssp HHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHH-TTSSCEEEE
T ss_pred HHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhc-cccCCEEEE
Confidence 98887654 234445433444333334555544 334678775
No 105
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.71 E-value=5.4e-05 Score=71.97 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=66.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCc----eec------------------CcccccCHHHhhhcCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT----EHL------------------GLPVFNTVAEAKAETK 99 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~----~i~------------------G~p~y~sl~dl~~~~~ 99 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..++..... +.. ++++|.+.+++.. +
T Consensus 3 irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~--~ 79 (334)
T 2czc_A 3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE--K 79 (334)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT--T
T ss_pred cEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc--C
Confidence 78999999 99999999998875 678887665532100 011 2356778899886 8
Q ss_pred CCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 020101 100 ANASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 100 iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~ 134 (331)
+|++++++|+..+.+.++.++++|.+. + ++...
T Consensus 80 vDvV~~aTp~~~h~~~a~~~l~aGk~V-i-~sap~ 112 (334)
T 2czc_A 80 VDIIVDATPGGIGAKNKPLYEKAGVKA-I-FQGGE 112 (334)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCEE-E-ECTTS
T ss_pred CCEEEECCCccccHHHHHHHHHcCCce-E-eeccc
Confidence 999999999999999999999999763 4 44443
No 106
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.70 E-value=0.00015 Score=68.34 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=70.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCCCce-----ecCc--ccccCHHH-hhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTE-----HLGL--PVFNTVAE-AKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~g~~-----i~G~--p~y~sl~d-l~~~~~iDlaii~vp~~ 110 (331)
...+|+|||+ |+||..+.+.+.+.|+ +++ ++|++. +. -.|. ..+.++++ +.. +.|++++++|+.
T Consensus 32 ~~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~-~~dr~~--~~~~~a~~~G~~~~~~~~~~~~~~~--~aDvVilavp~~ 105 (314)
T 3ggo_A 32 SMQNVLIVGV-GFMGGSFAKSLRRSGFKGKIY-GYDINP--ESISKAVDLGIIDEGTTSIAKVEDF--SPDFVMLSSPVR 105 (314)
T ss_dssp SCSEEEEESC-SHHHHHHHHHHHHTTCCSEEE-EECSCH--HHHHHHHHTTSCSEEESCTTGGGGG--CCSEEEECSCGG
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCCCEEE-EEECCH--HHHHHHHHCCCcchhcCCHHHHhhc--cCCEEEEeCCHH
Confidence 3467999998 9999999999999998 766 778765 22 1344 34667887 666 799999999999
Q ss_pred hHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHHH
Q 020101 111 FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 111 ~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a 146 (331)
...++++++... .-..+++-.++......+++.+..
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhc
Confidence 999998887763 344444433444433344444443
No 107
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.69 E-value=0.00015 Score=66.83 Aligned_cols=109 Identities=11% Similarity=0.155 Sum_probs=72.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v 116 (331)
+..+|+|||+ |++|+.+.+.+.+.|++++ .+|++... +. -.|+..+.+++++.. +.|++++++|... ...++
T Consensus 3 ~~~~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~vp~~~~~~~v~ 78 (301)
T 3cky_A 3 KSIKIGFIGL-GAMGKPMAINLLKEGVTVY-AFDLMEANVAAVVAQGAQACENNQKVAA--ASDIIFTSLPNAGIVETVM 78 (301)
T ss_dssp -CCEEEEECC-CTTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHTTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHCCCeecCCHHHHHh--CCCEEEEECCCHHHHHHHH
Confidence 3468999998 9999999999998899866 67765410 01 137778889988876 6899999998655 45555
Q ss_pred H---HHH---HcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 L---EAM---EAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 ~---~~~---~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
. +.. ..| +.++..++|.+ ...+++.+.+ ++.+++++.
T Consensus 79 ~~~~~l~~~l~~~-~~vv~~~~~~~-~~~~~l~~~~-~~~g~~~~~ 121 (301)
T 3cky_A 79 NGPGGVLSACKAG-TVIVDMSSVSP-SSTLKMAKVA-AEKGIDYVD 121 (301)
T ss_dssp HSTTCHHHHSCTT-CEEEECCCCCH-HHHHHHHHHH-HHTTCEEEE
T ss_pred cCcchHhhcCCCC-CEEEECCCCCH-HHHHHHHHHH-HHcCCeEEE
Confidence 3 332 223 34455666653 3344555555 445777663
No 108
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.66 E-value=5.1e-05 Score=67.51 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=67.3
Q ss_pred cccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 34 l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
+..++..+.++|+|||+ |+||+.+.+.|.+.|++++..++++... +. ..|...+.+..+..+ +.|++++++|+
T Consensus 15 ~~~~~~m~mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~--~aDvVilavp~ 91 (220)
T 4huj_A 15 TENLYFQSMTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDAL--QADVVILAVPY 91 (220)
T ss_dssp --CTTGGGSCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHT--TSSEEEEESCG
T ss_pred ccchhhhcCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHh--cCCEEEEeCCh
Confidence 44555445578999998 9999999999999999877447766421 11 235555555444444 68999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
+.+.++++++....-+.++-.+.|+.
T Consensus 92 ~~~~~v~~~l~~~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 92 DSIADIVTQVSDWGGQIVVDASNAID 117 (220)
T ss_dssp GGHHHHHTTCSCCTTCEEEECCCCBC
T ss_pred HHHHHHHHHhhccCCCEEEEcCCCCC
Confidence 99999887764322235555666763
No 109
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.65 E-value=3.2e-05 Score=73.69 Aligned_cols=104 Identities=11% Similarity=0.076 Sum_probs=73.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc---------CCeEEEEeCCCCCCc-eecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY---------GTKMVGGVTPKKGGT-EHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~---------g~~iv~~VnP~~~g~-~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+.++|+|+|+ |.+|+.+++.+.+. ++++++..+.+.... .+.....|.+++++. ++|++++++|..
T Consensus 2 k~irvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll---~iDvVve~t~~~ 77 (332)
T 2ejw_A 2 EALKIALLGG-GTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL---EADLVVEAMGGV 77 (332)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT---TCSEEEECCCCS
T ss_pred CeeEEEEEcC-CHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh---CCCEEEECCCCc
Confidence 3588999999 99999999887764 467887777654211 122234677888887 599999999976
Q ss_pred -hHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccC
Q 020101 111 -FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQS 150 (331)
Q Consensus 111 -~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~ 150 (331)
.+.+.+++|+++|.+. ++-..+.-.++..+|.+.| +++
T Consensus 78 ~~a~~~~~~AL~aGKhV-VtaNkkpla~~~~eL~~~A-~~~ 116 (332)
T 2ejw_A 78 EAPLRLVLPALEAGIPL-ITANKALLAEAWESLRPFA-EEG 116 (332)
T ss_dssp HHHHHHHHHHHHTTCCE-EECCHHHHHHSHHHHHHHH-HTT
T ss_pred HHHHHHHHHHHHcCCeE-EECCchhHHHHHHHHHHHH-HhC
Confidence 5788999999999997 4321221114456777777 555
No 110
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.65 E-value=0.00013 Score=67.05 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=71.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHHHHH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAILEA 119 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v~~~ 119 (331)
+|+|||+ |+||+.+.+.+.+.|++++ .+|++... +. -.|+.++.+++++.. +.|++++++|.. ...+++.+.
T Consensus 2 ~i~iiG~-G~mG~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~Dvvi~~vp~~~~~~~v~~~~ 77 (296)
T 2gf2_A 2 PVGFIGL-GNMGNPMAKNLMKHGYPLI-IYDVFPDACKEFQDAGEQVVSSPADVAE--KADRIITMLPTSINAIEAYSGA 77 (296)
T ss_dssp CEEEECC-STTHHHHHHHHHHTTCCEE-EECSSTHHHHHHHTTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHHST
T ss_pred eEEEEec-cHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCeecCCHHHHHh--cCCEEEEeCCCHHHHHHHHhCc
Confidence 5789999 9999999999999899866 77775410 11 147778889988776 689999999754 555555542
Q ss_pred ---HH-cCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 120 ---ME-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 120 ---~~-~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
.. ..-..+++-+.|.+.+..+++.+.+ .+.+..++
T Consensus 78 ~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~-~~~g~~~~ 116 (296)
T 2gf2_A 78 NGILKKVKKGSLLIDSSTIDPAVSKELAKEV-EKMGAVFM 116 (296)
T ss_dssp TSGGGTCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEE
T ss_pred hhHHhcCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEE
Confidence 11 1222334447788777666665555 33454443
No 111
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.63 E-value=0.00019 Score=56.10 Aligned_cols=86 Identities=15% Similarity=0.078 Sum_probs=62.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCC-ce--ecCcccc-------cCHHHhhhcCCCCEEEEecChh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGG-TE--HLGLPVF-------NTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g-~~--i~G~p~y-------~sl~dl~~~~~iDlaii~vp~~ 110 (331)
..+|+|+|+ |.+|+.+.+.+.+.| ++++ .++.+... +. ..++..+ .+++++.+ ++|+++.++|..
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~~~~~ 80 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVT-VADHDLAALAVLNRMGVATKQVDAKDEAGLAKALG--GFDAVISAAPFF 80 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEE-EEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTT--TCSEEEECSCGG
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHc--CCCEEEECCCch
Confidence 467899999 999999999999998 7765 55554310 01 1122221 23445554 799999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.+. +++
T Consensus 81 ~~~~~~~~~~~~g~~~~~-~~~ 101 (118)
T 3ic5_A 81 LTPIIAKAAKAAGAHYFD-LTE 101 (118)
T ss_dssp GHHHHHHHHHHTTCEEEC-CCS
T ss_pred hhHHHHHHHHHhCCCEEE-ecC
Confidence 999999999999999743 443
No 112
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.62 E-value=0.00013 Score=68.00 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=71.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-e--ecCcccccCHHHhhhcCCCCEEEEecC-hhhHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-E--HLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAILE 118 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~--i~G~p~y~sl~dl~~~~~iDlaii~vp-~~~~~~~v~~ 118 (331)
.+|+|||+ |+||..+.+.+.+.|++++ .+|++.... . -.|..++.+++++.+ +.|++++++| +....+++.+
T Consensus 31 ~~I~iIG~-G~mG~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~DvVi~av~~~~~~~~v~~~ 106 (316)
T 2uyy_A 31 KKIGFLGL-GLMGSGIVSNLLKMGHTVT-VWNRTAEKCDLFIQEGARLGRTPAEVVS--TCDITFACVSDPKAAKDLVLG 106 (316)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSGGGGHHHHHTTCEECSCHHHHHH--HCSEEEECCSSHHHHHHHHHS
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHHcCCEEcCCHHHHHh--cCCEEEEeCCCHHHHHHHHcC
Confidence 56899998 9999999999998899865 677654211 1 146777888888776 6899999999 6777776654
Q ss_pred HH---H-cCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 119 AM---E-AELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 119 ~~---~-~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
.. + ..-..+++-.+..+....+++.+.+ .+.++++++
T Consensus 107 ~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~-~~~~~~~v~ 147 (316)
T 2uyy_A 107 PSGVLQGIRPGKCYVDMSTVDADTVTELAQVI-VSRGGRFLE 147 (316)
T ss_dssp TTCGGGGCCTTCEEEECSCCCHHHHHHHHHHH-HHTTCEEEE
T ss_pred chhHhhcCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 21 1 1222333323334444455565555 445777764
No 113
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.61 E-value=0.00022 Score=66.85 Aligned_cols=108 Identities=11% Similarity=0.146 Sum_probs=76.2
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~ 119 (331)
.||.+||. |+||....++|.+.||+++ +.|.+...-+ -.|....+|++|+.+ ..|+++.++|...+.+.+-.-
T Consensus 4 ~kIgfIGl-G~MG~~mA~~L~~~G~~v~-v~dr~~~~~~~l~~~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~v~~V~~~ 79 (300)
T 3obb_A 4 KQIAFIGL-GHMGAPMATNLLKAGYLLN-VFDLVQSAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGLYLD 79 (300)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHTTCEECSSHHHHHT--TCSEEEECCSCHHHHHHHHHS
T ss_pred CEEEEeee-hHHHHHHHHHHHhCCCeEE-EEcCCHHHHHHHHHcCCEEcCCHHHHHh--cCCceeecCCchHHHHHHHhc
Confidence 47899999 9999999999999999976 6676541011 257888899999987 799999999987665544321
Q ss_pred ----HHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 120 ----MEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 120 ----~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
.+. .-..+||-.+-.+.++.+++.+.+ +++|+.++
T Consensus 80 ~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~-~~~G~~~l 119 (300)
T 3obb_A 80 DDGLLAHIAPGTLVLECSTIAPTSARKIHAAA-RERGLAML 119 (300)
T ss_dssp SSSSTTSCCC-CEEEECSCCCHHHHHHHHHHH-HTTTCEEE
T ss_pred hhhhhhcCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEE
Confidence 111 112334433344566777777777 78898877
No 114
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.60 E-value=0.00018 Score=65.13 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=69.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-----ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-----i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
+|.|||+ |+||..+.+.|.+.|++++ ..|+....+. -.|+. .+++++.+ +.|++++++|+....+.+.+
T Consensus 2 ~I~iIG~-G~mG~~la~~l~~~g~~V~-~~~~~~~~~~~~~~~~~g~~--~~~~~~~~--~aDvvi~~v~~~~~~~~~~~ 75 (264)
T 1i36_A 2 RVGFIGF-GEVAQTLASRLRSRGVEVV-TSLEGRSPSTIERARTVGVT--ETSEEDVY--SCPVVISAVTPGVALGAARR 75 (264)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCEEE-ECCTTCCHHHHHHHHHHTCE--ECCHHHHH--TSSEEEECSCGGGHHHHHHH
T ss_pred eEEEEec-hHHHHHHHHHHHHCCCeEE-EeCCccCHHHHHHHHHCCCc--CCHHHHHh--cCCEEEEECCCHHHHHHHHH
Confidence 6889999 9999999999999999877 4677321011 13554 67777766 78999999999887777776
Q ss_pred HHHcCCcEEEEecCCCChhHHHHHHHHHhccCC
Q 020101 119 AMEAELDLVVCITEGIPQHDMVRVKAALNNQSK 151 (331)
Q Consensus 119 ~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~g 151 (331)
..+.--+ +++-.++.+....+++.+.+ .+.|
T Consensus 76 ~~~~~~~-~vi~~s~~~~~~~~~l~~~~-~~~g 106 (264)
T 1i36_A 76 AGRHVRG-IYVDINNISPETVRMASSLI-EKGG 106 (264)
T ss_dssp HHTTCCS-EEEECSCCCHHHHHHHHHHC-SSSE
T ss_pred HHHhcCc-EEEEccCCCHHHHHHHHHHH-hhCC
Confidence 6654333 45445566655556666655 4443
No 115
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.60 E-value=7.2e-05 Score=74.57 Aligned_cols=118 Identities=9% Similarity=0.097 Sum_probs=79.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc------CCeEEEEeCCCCCCc---eecCcccc----cCHHHhhhcCCCCEEEEecCh
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY------GTKMVGGVTPKKGGT---EHLGLPVF----NTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~------g~~iv~~VnP~~~g~---~i~G~p~y----~sl~dl~~~~~iDlaii~vp~ 109 (331)
.+|+|||. |+||..++++|++. |++++...+...... .-.|+... .+++|+.+ +.|++++++|+
T Consensus 55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~--~ADVVILaVP~ 131 (525)
T 3fr7_A 55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVS--GSDLVLLLISD 131 (525)
T ss_dssp SEEEEECC-TTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHH--HCSEEEECSCH
T ss_pred CEEEEEeE-hHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHh--cCCEEEECCCh
Confidence 57889999 99999999999998 998664555432111 13576652 57888877 68999999999
Q ss_pred hhHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcc
Q 020101 110 PFAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVI 163 (331)
Q Consensus 110 ~~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~ 163 (331)
....+++++...+ .-..+|.++.||+-...++-.....+...+-.+.||+.|..
T Consensus 132 ~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 132 AAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPS 186 (525)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHH
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchh
Confidence 9888888775542 33456789999964433210001101223446679998875
No 116
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.59 E-value=0.00012 Score=70.09 Aligned_cols=91 Identities=13% Similarity=0.045 Sum_probs=65.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCceec-------C--cccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHL-------G--LPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i~-------G--~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+.+||+|+||+|.+|+.+++.|.+. .+++++..+....|..+. | -..+.+++++ . ++|+++.++|..
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~~-~--~vDvV~~a~g~~ 79 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEKL-E--PADILVLALPHG 79 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGGC-C--CCSEEEECCCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhHh-c--CCCEEEEcCCcH
Confidence 3578999999999999999998876 468886665443333221 1 0112233332 3 799999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 111 FAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 111 ~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
.+.+.+..+.++|++. |..+.-|.
T Consensus 80 ~s~~~a~~~~~aG~~V-Id~Sa~~r 103 (345)
T 2ozp_A 80 VFAREFDRYSALAPVL-VDLSADFR 103 (345)
T ss_dssp HHHHTHHHHHTTCSEE-EECSSTTS
T ss_pred HHHHHHHHHHHCCCEE-EEcCcccc
Confidence 9999999999999984 55666553
No 117
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.59 E-value=7.5e-05 Score=71.88 Aligned_cols=107 Identities=12% Similarity=0.178 Sum_probs=73.1
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee---cC-----cccccCHHHhhhcCCCCEEEEecChh
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LG-----LPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i---~G-----~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
-+..+|+|+|+ |.+|+.+++.|.+. +++. ..|.+... +.. .+ +.-+.+++++.+ ++|++|.++|+.
T Consensus 14 ~~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~-V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~--~~DvVIn~~P~~ 88 (365)
T 2z2v_A 14 GRHMKVLILGA-GNIGRAIAWDLKDE-FDVY-IGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK--EFELVIGALPGF 88 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTTT-SEEE-EEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT--TCSCEEECCCHH
T ss_pred CCCCeEEEEcC-CHHHHHHHHHHHcC-CeEE-EEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHh--CCCEEEECCChh
Confidence 46778999999 99999999998877 7654 65654310 011 11 112345777776 799999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 111 FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 111 ~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
.+.++++.|++.|++. +-++. .++ +..++.+.| +++|+.++
T Consensus 89 ~~~~v~~a~l~~G~~~-vD~s~-~~~-~~~~l~~~A-k~aG~~~l 129 (365)
T 2z2v_A 89 LGFKSIKAAIKSKVDM-VDVSF-MPE-NPLELRDEA-EKAQVTIV 129 (365)
T ss_dssp HHHHHHHHHHHTTCCE-EECCC-CSS-CGGGGHHHH-HHTTCEEE
T ss_pred hhHHHHHHHHHhCCeE-EEccC-CcH-HHHHHHHHH-HHcCCEEE
Confidence 9999999999999997 43443 222 233455556 67888876
No 118
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.00021 Score=71.52 Aligned_cols=111 Identities=13% Similarity=0.086 Sum_probs=74.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce-e------cCcccccCHHHhhhc-CCCCEEEEecCh-hh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE-H------LGLPVFNTVAEAKAE-TKANASAIYVPP-PF 111 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~-i------~G~p~y~sl~dl~~~-~~iDlaii~vp~-~~ 111 (331)
+.+|+|||+ |.||..+.++|.+.|++++ ..|+.... +. . .|+....+++++.+. .++|++++++|+ ..
T Consensus 10 ~~~IgvIGl-G~MG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 87 (497)
T 2p4q_A 10 SADFGLIGL-AVMGQNLILNAADHGFTVC-AYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAP 87 (497)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHH
T ss_pred CCCEEEEee-HHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHH
Confidence 346889999 9999999999999999876 77765411 11 1 367778889988762 138999999999 57
Q ss_pred HHHHHHHHHHc-CC-cEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 112 AAAAILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 112 ~~~~v~~~~~~-Gi-~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+.++++++... .- +.+|..+++. ..+..++.+.+ ++.|+.+++
T Consensus 88 v~~vl~~l~~~l~~g~iIId~s~~~-~~~~~~l~~~l-~~~g~~~v~ 132 (497)
T 2p4q_A 88 VDALINQIVPLLEKGDIIIDGGNSH-FPDSNRRYEEL-KKKGILFVG 132 (497)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHH-HHTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCC-hhHHHHHHHHH-HHcCCceeC
Confidence 77788766543 12 2334355554 33444455554 456777664
No 119
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.53 E-value=0.00011 Score=68.34 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=73.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCccc-ccCHHHhhhcCCCCEEEEecChhh-HHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPV-FNTVAEAKAETKANASAIYVPPPF-AAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~-y~sl~dl~~~~~iDlaii~vp~~~-~~~~ 115 (331)
+..+|+|||+ |+||..+.+.|.+.|++++ .+|++... +. -.|... ..+++++.+ +.|++++++|... +..+
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~~e~~~--~aDvvi~~vp~~~~~~~v 81 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTW-GADLNPQACANLLAEGACGAAASAREFAG--VVDALVILVVNAAQVRQV 81 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCSEEESSSTTTTT--TCSEEEECCSSHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHcCCccccCCHHHHHh--cCCEEEEECCCHHHHHHH
Confidence 4567999999 9999999999999999876 77776410 01 136655 778888876 7899999999864 4444
Q ss_pred H---HHHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 116 I---LEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 116 v---~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+ ++.... .-..+++-.+..+....+++.+.+ ++.|+.++.
T Consensus 82 ~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~-~~~g~~~~~ 125 (303)
T 3g0o_A 82 LFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAAL-TALNLNMLD 125 (303)
T ss_dssp HC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHH-HTTTCEEEE
T ss_pred HhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHH-HHcCCeEEe
Confidence 4 333221 122334444445555556666655 567777664
No 120
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.48 E-value=0.00033 Score=63.99 Aligned_cols=106 Identities=10% Similarity=-0.068 Sum_probs=67.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--cCcccccCHHHhhhcCCCCEEEEecChhh-HHHHHHHH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAILEA 119 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v~~~ 119 (331)
+|+|||+ |++|+.+.+.+.+ |++++ .+|++... +.. .|+..+. ++++.. +.|++++++|... ..+++++.
T Consensus 3 ~i~iiG~-G~~G~~~a~~l~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~--~~D~vi~~v~~~~~~~~v~~~l 76 (289)
T 2cvz_A 3 KVAFIGL-GAMGYPMAGHLAR-RFPTL-VWNRTFEKALRHQEEFGSEAV-PLERVA--EARVIFTCLPTTREVYEVAEAL 76 (289)
T ss_dssp CEEEECC-STTHHHHHHHHHT-TSCEE-EECSSTHHHHHHHHHHCCEEC-CGGGGG--GCSEEEECCSSHHHHHHHHHHH
T ss_pred eEEEEcc-cHHHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHCCCcccC-HHHHHh--CCCEEEEeCCChHHHHHHHHHH
Confidence 5889999 9999999999999 99865 77765410 111 2555555 666655 6899999999775 66666555
Q ss_pred HHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 120 MEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 120 ~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
... .-..+++..+.......+++.+.+ ++.++.++.
T Consensus 77 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~-~~~g~~~~~ 113 (289)
T 2cvz_A 77 YPYLREGTYWVDATSGEPEASRRLAERL-REKGVTYLD 113 (289)
T ss_dssp TTTCCTTEEEEECSCCCHHHHHHHHHHH-HTTTEEEEE
T ss_pred HhhCCCCCEEEECCCCCHHHHHHHHHHH-HHcCCEEEE
Confidence 432 223434333333444455566665 455766653
No 121
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.48 E-value=0.00021 Score=68.15 Aligned_cols=92 Identities=11% Similarity=0.084 Sum_probs=67.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCC---CCCceec-------C---ccccc--CHHHhhhcCCCCEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK---KGGTEHL-------G---LPVFN--TVAEAKAETKANASA 104 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~---~~g~~i~-------G---~p~y~--sl~dl~~~~~iDlai 104 (331)
..++|+|+||+|..|+.+++.|.++ .+++++....+ ..|+.+. | .++.+ +.+++.+ ++|+++
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~--~~Dvvf 80 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSP--GVDVVF 80 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCT--TCSEEE
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhc--CCCEEE
Confidence 3578999999999999999998885 67877554433 3344322 2 12211 3444433 799999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 105 IYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 105 i~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
.++|.....+.+.++.++|++. |-.++-|.
T Consensus 81 ~a~p~~~s~~~~~~~~~~g~~v-IDlSa~fR 110 (337)
T 3dr3_A 81 LATAHEVSHDLAPQFLEAGCVV-FDLSGAFR 110 (337)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEE-EECSSTTS
T ss_pred ECCChHHHHHHHHHHHHCCCEE-EEcCCccc
Confidence 9999999999999999999986 55777764
No 122
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.48 E-value=0.00017 Score=68.90 Aligned_cols=112 Identities=15% Similarity=0.103 Sum_probs=74.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc---eecCcccccCHHHhhhc--CCCCEEEEecChhhHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAE--TKANASAIYVPPPFAAA 114 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~---~i~G~p~y~sl~dl~~~--~~iDlaii~vp~~~~~~ 114 (331)
|...+|+|||+ |+||..+.+.|.+.|++++ +.|++...- .-.|+..+.+++++..+ .+.|++++++|+....+
T Consensus 6 ~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~-~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~ 83 (341)
T 3ktd_A 6 DISRPVCILGL-GLIGGSLLRDLHAANHSVF-GYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDS 83 (341)
T ss_dssp CCSSCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred CCCCEEEEEee-cHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHH
Confidence 34456889998 9999999999999999877 778764100 12466667788776541 14799999999999898
Q ss_pred HHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 115 AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
++++.....-..+++-..+....-.+++.+.. .+.++++
T Consensus 84 vl~~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~---~~~~~v~ 122 (341)
T 3ktd_A 84 LLDAVHTHAPNNGFTDVVSVKTAVYDAVKARN---MQHRYVG 122 (341)
T ss_dssp HHHHHHHHCTTCCEEECCSCSHHHHHHHHHTT---CGGGEEC
T ss_pred HHHHHHccCCCCEEEEcCCCChHHHHHHHHhC---CCCcEec
Confidence 88887765444444334445443333433221 1356665
No 123
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.47 E-value=0.00014 Score=69.39 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=62.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCc----eecCcccccC-----------------HHHhhhcCCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT----EHLGLPVFNT-----------------VAEAKAETKA 100 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~----~i~G~p~y~s-----------------l~dl~~~~~i 100 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..++..... ...|++.|.+ ++++.+ ++
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~--~v 78 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK--TS 78 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH--HC
T ss_pred eEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc--CC
Confidence 68999999 99999999998876 678887766543100 0124555533 334433 68
Q ss_pred CEEEEecChhhHHHHHHHHHHcCCcEEE
Q 020101 101 NASAIYVPPPFAAAAILEAMEAELDLVV 128 (331)
Q Consensus 101 Dlaii~vp~~~~~~~v~~~~~~Gi~~iv 128 (331)
|++++|+|+....+..+.++++|++.+.
T Consensus 79 DvV~~aTp~~~s~~~a~~~~~aG~kvV~ 106 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPIYLQLQRNAIF 106 (340)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECCCCchhHHHHHHHHHcCCeEEE
Confidence 9999999999999999999999999754
No 124
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.47 E-value=0.00018 Score=71.71 Aligned_cols=110 Identities=15% Similarity=0.085 Sum_probs=74.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--c----CcccccCHHHhhhc-CCCCEEEEecCh-hhHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L----GLPVFNTVAEAKAE-TKANASAIYVPP-PFAA 113 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~----G~p~y~sl~dl~~~-~~iDlaii~vp~-~~~~ 113 (331)
.+|+|||+ |.||+.+.++|.+.|++++ ..|++... +.+ . |+....+++++.+. .++|++++++|+ ..+.
T Consensus 16 ~~IgvIGl-G~MG~~lA~~La~~G~~V~-v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 93 (480)
T 2zyd_A 16 QQIGVVGM-AVMGRNLALNIESRGYTVS-IFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTD 93 (480)
T ss_dssp BSEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHH
T ss_pred CeEEEEcc-HHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHH
Confidence 45889999 9999999999999999876 77775410 111 1 67778899988762 138999999999 5778
Q ss_pred HHHHHHHHcC-C-cEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 114 AAILEAMEAE-L-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 114 ~~v~~~~~~G-i-~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
++++++...- - ..+|..+.|.+ .+..++.+.+ ++.|+++++
T Consensus 94 ~vl~~l~~~l~~g~iIId~s~g~~-~~t~~l~~~l-~~~g~~~v~ 136 (480)
T 2zyd_A 94 AAIDSLKPYLDKGDIIIDGGNTFF-QDTIRRNREL-SAEGFNFIG 136 (480)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHH-HHTTCEEEE
T ss_pred HHHHHHHhhcCCCCEEEECCCCCH-HHHHHHHHHH-HHCCCCeeC
Confidence 8887765431 1 24444566653 3334445554 456777663
No 125
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.46 E-value=0.00029 Score=70.02 Aligned_cols=110 Identities=16% Similarity=0.127 Sum_probs=73.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--c----CcccccCHHHhhhc-CCCCEEEEecChh-hHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L----GLPVFNTVAEAKAE-TKANASAIYVPPP-FAA 113 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~----G~p~y~sl~dl~~~-~~iDlaii~vp~~-~~~ 113 (331)
.+|+|||+ |.||+.+.++|.+.|+++. .+|+.... +.+ . |+..+.+++++.+. .++|++++++|+. .+.
T Consensus 6 ~~IgvIG~-G~mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~ 83 (474)
T 2iz1_A 6 ANFGVVGM-AVMGKNLALNVESRGYTVA-IYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD 83 (474)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHH
T ss_pred CcEEEEee-HHHHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHH
Confidence 46889999 9999999999999999865 77775410 111 1 67778899998762 1389999999994 667
Q ss_pred HHHHHHHHc-CC-cEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 114 AAILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 114 ~~v~~~~~~-Gi-~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
++++++... .- +.++..+.+. ..+..++.+.+ ++.|+.+++
T Consensus 84 ~vl~~l~~~l~~g~iiId~s~~~-~~~~~~l~~~l-~~~g~~~v~ 126 (474)
T 2iz1_A 84 ATIKSLLPLLDIGDILIDGGNTH-FPDTMRRNAEL-ADSGINFIG 126 (474)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHT-TTSSCEEEE
T ss_pred HHHHHHHhhCCCCCEEEECCCCC-HHHHHHHHHHH-HHCCCeEEC
Confidence 777665432 11 2344445554 33444555555 566777663
No 126
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.43 E-value=0.00029 Score=66.29 Aligned_cols=108 Identities=13% Similarity=0.044 Sum_probs=75.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCC--C--ce------ecCccccc-CHHHhhhcCCCCEEEEecCh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKG--G--TE------HLGLPVFN-TVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~--g--~~------i~G~p~y~-sl~dl~~~~~iDlaii~vp~ 109 (331)
..+|+|||+ |+||..+.+.|.+.| ++++ .+|++.. . ++ -.|+ .. +++++.+ +.|++++++|+
T Consensus 24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~-~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~--~aDvVi~avp~ 97 (317)
T 4ezb_A 24 MTTIAFIGF-GEAAQSIAGGLGGRNAARLA-AYDLRFNDPAASGALRARAAELGV--EPLDDVAGIA--CADVVLSLVVG 97 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCSEEE-EECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGG--GCSEEEECCCG
T ss_pred CCeEEEECc-cHHHHHHHHHHHHcCCCeEE-EEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHh--cCCEEEEecCC
Confidence 357899998 999999999999999 8876 6665530 0 01 1355 66 7888776 68999999999
Q ss_pred hhHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 110 PFAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 110 ~~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
....+.+++.... .-..+++-.++.+....+++.+.. ++.|+.++.
T Consensus 98 ~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l-~~~g~~~~d 144 (317)
T 4ezb_A 98 AATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAI-ATGKGSFVE 144 (317)
T ss_dssp GGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHH-HTSSCEEEE
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHH-HHcCCeEEe
Confidence 9999888776553 223445444566666666666665 566776553
No 127
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.43 E-value=0.00023 Score=68.10 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=63.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeC-CCCCCcee---cC-----------cc-ccc--CHHHhhhcCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVT-PKKGGTEH---LG-----------LP-VFN--TVAEAKAETKAN 101 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~Vn-P~~~g~~i---~G-----------~p-~y~--sl~dl~~~~~iD 101 (331)
+.++|+|+||+|.+|+.+++.|.+. .+++++..+ ....|+.+ .+ .. .+. +.+++ + ++|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~vD 79 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-K--DVD 79 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-T--TCS
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-c--CCC
Confidence 4589999999999999999988876 567875542 32222322 11 11 122 23333 3 799
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 020101 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 102 laii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~ 134 (331)
++++++|...+.+.+..+.++|++. |-.++-|
T Consensus 80 vVf~atp~~~s~~~a~~~~~aG~~V-Id~s~~~ 111 (350)
T 2ep5_A 80 VVLSALPNELAESIELELVKNGKIV-VSNASPF 111 (350)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEE-EECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEE-EECCccc
Confidence 9999999999999999999999994 5455544
No 128
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.40 E-value=2.3e-05 Score=76.55 Aligned_cols=87 Identities=14% Similarity=0.060 Sum_probs=66.6
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC--CCCCCceecCcccccCHHHhhh--cCCCCEEEEecChhhHHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT--PKKGGTEHLGLPVFNTVAEAKA--ETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn--P~~~g~~i~G~p~y~sl~dl~~--~~~iDlaii~vp~~~~~~~ 115 (331)
.+..+|+|+|| |..|+.+++.+.+.|+++++.+| |...|..+.|+|++.. +++++ +.+++.+++++ ....++
T Consensus 50 ~~~~~v~IiGA-G~~G~~l~~~l~~~g~~ivgfiDdd~~~~g~~i~GipV~~~-~~l~~~~~~~~~~viiai--~~r~~i 125 (409)
T 2py6_A 50 GNATRLVILGT-KGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYYGLPIIST-DRFTELATHDRDLVALNT--CRYDGP 125 (409)
T ss_dssp GGGCEEEEECS-SSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEETTEEEECH-HHHHHHHHTCTTEEEEEC--CCSHHH
T ss_pred CCCCeEEEEeC-CHHHHHHHHHHHHCCCEEEEEEeCCcccccCEECCEEEECH-HHHHHHHhCCCCEEEEec--cHHHHH
Confidence 55678999999 99999999877777899998877 5555678999999974 44443 45678888888 344678
Q ss_pred HHHHHHcCCcEEEEe
Q 020101 116 ILEAMEAELDLVVCI 130 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~ 130 (331)
++.+.+.|++.+|.|
T Consensus 126 ~~~l~~~g~~~il~f 140 (409)
T 2py6_A 126 KRFFDQICRTHGIPH 140 (409)
T ss_dssp HHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCCEEEec
Confidence 888887777766655
No 129
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.39 E-value=6.5e-05 Score=70.85 Aligned_cols=91 Identities=19% Similarity=0.232 Sum_probs=64.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--cC-----------cccccCHHHhhhcCCCCEEEEec
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LG-----------LPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~G-----------~p~y~sl~dl~~~~~iDlaii~v 107 (331)
..+|+|||+ |+||......|.+.|+++. .+|+.... +.+ .| +.+..+.++ .+ +.|++++++
T Consensus 14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~--~aDvVil~v 88 (335)
T 1z82_A 14 EMRFFVLGA-GSWGTVFAQMLHENGEEVI-LWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IK--KEDILVIAI 88 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CC--TTEEEEECS
T ss_pred CCcEEEECc-CHHHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hc--CCCEEEEEC
Confidence 467899999 9999999999999999876 67764310 111 12 355667777 44 689999999
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEecCCCChhH
Q 020101 108 PPPFAAAAILEAMEAELDLVVCITEGIPQHD 138 (331)
Q Consensus 108 p~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~ 138 (331)
|+..+.++++++.. .=+.++.++.|++.++
T Consensus 89 k~~~~~~v~~~l~~-~~~~vv~~~nGi~~~~ 118 (335)
T 1z82_A 89 PVQYIREHLLRLPV-KPSMVLNLSKGIEIKT 118 (335)
T ss_dssp CGGGHHHHHTTCSS-CCSEEEECCCCCCTTT
T ss_pred CHHHHHHHHHHhCc-CCCEEEEEeCCCCCCc
Confidence 99888888866433 2245666777886543
No 130
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.39 E-value=0.00016 Score=68.76 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=69.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH----
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI---- 116 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v---- 116 (331)
..+|.|||+ |++|+.+++.+...|++++ ..|+.. +...|...+.+++++.. +.|++++++|.. ....++
T Consensus 164 g~~vgIIG~-G~iG~~vA~~l~~~G~~V~-~~dr~~--~~~~g~~~~~~l~ell~--~aDvVil~vP~~~~t~~li~~~~ 237 (333)
T 3ba1_A 164 GKRVGIIGL-GRIGLAVAERAEAFDCPIS-YFSRSK--KPNTNYTYYGSVVELAS--NSDILVVACPLTPETTHIINREV 237 (333)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSC--CTTCCSEEESCHHHHHH--TCSEEEECSCCCGGGTTCBCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EECCCc--hhccCceecCCHHHHHh--cCCEEEEecCCChHHHHHhhHHH
Confidence 346888999 9999999999999999977 677765 33346666788999887 789999999974 233332
Q ss_pred HHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 ~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
....+.| ..+++.+.|.. .+..+|.+.. ++.++.-.|
T Consensus 238 l~~mk~g-ailIn~srG~~-vd~~aL~~aL-~~g~i~ga~ 274 (333)
T 3ba1_A 238 IDALGPK-GVLINIGRGPH-VDEPELVSAL-VEGRLGGAG 274 (333)
T ss_dssp HHHHCTT-CEEEECSCGGG-BCHHHHHHHH-HHTSSCEEE
T ss_pred HhcCCCC-CEEEECCCCch-hCHHHHHHHH-HcCCCeEEE
Confidence 1223333 24455666643 2333455544 454454444
No 131
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.38 E-value=0.00039 Score=65.33 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=68.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC----CeEEEEeCCCCC--C-ce--ecCcccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG----TKMVGGVTPKKG--G-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g----~~iv~~VnP~~~--g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
.++|+|||+ |+||..+...|.+.| ++++ .+|++.. . +. ..|+.+..+..++.+ +.|++++++|+..+
T Consensus 22 ~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~-v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~--~aDvVilav~~~~~ 97 (322)
T 2izz_A 22 SMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIM-ASSPDMDLATVSALRKMGVKLTPHNKETVQ--HSDVLFLAVKPHII 97 (322)
T ss_dssp CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEE-EECSCTTSHHHHHHHHHTCEEESCHHHHHH--HCSEEEECSCGGGH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCcceEE-EECCCccHHHHHHHHHcCCEEeCChHHHhc--cCCEEEEEeCHHHH
Confidence 356899999 999999999999888 6665 7777642 0 11 247777778877776 68999999999999
Q ss_pred HHHHHHHHHc-CC-cEEEEecCCCChhHH
Q 020101 113 AAAILEAMEA-EL-DLVVCITEGIPQHDM 139 (331)
Q Consensus 113 ~~~v~~~~~~-Gi-~~ivi~t~G~~e~~~ 139 (331)
.+++++.... .- +.++.++.|++.+..
T Consensus 98 ~~vl~~l~~~l~~~~ivvs~s~gi~~~~l 126 (322)
T 2izz_A 98 PFILDEIGADIEDRHIVVSCAAGVTISSI 126 (322)
T ss_dssp HHHHHHHGGGCCTTCEEEECCTTCCHHHH
T ss_pred HHHHHHHHhhcCCCCEEEEeCCCCCHHHH
Confidence 9998876542 22 344556678875543
No 132
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.38 E-value=0.00067 Score=62.99 Aligned_cols=97 Identities=11% Similarity=0.151 Sum_probs=67.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHHHc
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA 122 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~ 122 (331)
.+|+|||+.|+||..+.+.+.+.|++++ .+|++. + .+.++... +.|++++++|+....+++++....
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~-~~~~~~--~--------~~~~~~~~--~aDvVilavp~~~~~~vl~~l~~~ 88 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPIS-ILDRED--W--------AVAESILA--NADVVIVSVPINLTLETIERLKPY 88 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEE-EECTTC--G--------GGHHHHHT--TCSEEEECSCGGGHHHHHHHHGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEE-EEECCc--c--------cCHHHHhc--CCCEEEEeCCHHHHHHHHHHHHhh
Confidence 4688999339999999999999999876 778765 2 24666665 789999999999999999887542
Q ss_pred -CCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 123 -ELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 123 -Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
.-..+|+..++......+++.+. .+.++++
T Consensus 89 l~~~~iv~~~~svk~~~~~~~~~~----~~~~~v~ 119 (298)
T 2pv7_A 89 LTENMLLADLTSVKREPLAKMLEV----HTGAVLG 119 (298)
T ss_dssp CCTTSEEEECCSCCHHHHHHHHHH----CSSEEEE
T ss_pred cCCCcEEEECCCCCcHHHHHHHHh----cCCCEEe
Confidence 22334544556654444444332 2356664
No 133
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.36 E-value=0.00042 Score=65.99 Aligned_cols=86 Identities=16% Similarity=0.168 Sum_probs=61.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCc---------ee-------------cCcccccCHHHhhhcCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT---------EH-------------LGLPVFNTVAEAKAETK 99 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~---------~i-------------~G~p~y~sl~dl~~~~~ 99 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..+...... .+ .++++..+.+++.. +
T Consensus 2 ikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~--~ 78 (337)
T 1cf2_P 2 KAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD--E 78 (337)
T ss_dssp EEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH--T
T ss_pred eEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc--C
Confidence 68999999 99999999998874 788886655432100 01 01222234556655 7
Q ss_pred CCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 100 ANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 100 iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+|+++.++|...+.+.+..++++|++. +..++
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~aG~~V-Id~sp 110 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKEKGIKA-IFQGG 110 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCCE-EECTT
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCEE-EEecC
Confidence 999999999999999999999999884 44343
No 134
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.36 E-value=0.00049 Score=62.70 Aligned_cols=95 Identities=11% Similarity=0.102 Sum_probs=65.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcc--cccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLP--VFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p--~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
+|+|||+ |+||+.+.+.+.+.|++++ .+|++... +. -.|.+ .+.+++++ . +.|++++++|+..+.+++++
T Consensus 2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~D~vi~av~~~~~~~~~~~ 76 (279)
T 2f1k_A 2 KIGVVGL-GLIGASLAGDLRRRGHYLI-GVSRQQSTCEKAVERQLVDEAGQDLSLL-Q--TAKIIFLCTPIQLILPTLEK 76 (279)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTSCSEEESCGGGG-T--TCSEEEECSCHHHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHhCCCCccccCCHHHh-C--CCCEEEEECCHHHHHHHHHH
Confidence 6889998 9999999999999999866 67775410 01 12443 46678887 5 79999999999999998887
Q ss_pred HHHc-CCcEEEEecCCCChhHHHHHH
Q 020101 119 AMEA-ELDLVVCITEGIPQHDMVRVK 143 (331)
Q Consensus 119 ~~~~-Gi~~ivi~t~G~~e~~~~~l~ 143 (331)
+... .-..+++-..+.+....+++.
T Consensus 77 l~~~~~~~~~vv~~~~~~~~~~~~~~ 102 (279)
T 2f1k_A 77 LIPHLSPTAIVTDVASVKTAIAEPAS 102 (279)
T ss_dssp HGGGSCTTCEEEECCSCCHHHHHHHH
T ss_pred HHhhCCCCCEEEECCCCcHHHHHHHH
Confidence 7543 223344434555544444443
No 135
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.35 E-value=0.00017 Score=64.93 Aligned_cols=93 Identities=19% Similarity=0.241 Sum_probs=66.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCC----eEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGT----KMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~----~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
.+|+|||+ |+||+.+.+.|.+.|+ +++ .+|++... + +..|+..+.+.+++.+ +.|++++++|++...+
T Consensus 3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~-~~~r~~~~~~~~~~~~g~~~~~~~~e~~~--~aDvVilav~~~~~~~ 78 (247)
T 3gt0_A 3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQII-CSDLNTANLKNASEKYGLTTTTDNNEVAK--NADILILSIKPDLYAS 78 (247)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEE-EECSCHHHHHHHHHHHCCEECSCHHHHHH--HCSEEEECSCTTTHHH
T ss_pred CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEE-EEeCCHHHHHHHHHHhCCEEeCChHHHHH--hCCEEEEEeCHHHHHH
Confidence 46889998 9999999999999987 665 77776411 1 1248888889988877 6899999999999999
Q ss_pred HHHHHHHc-CCc-EEEEecCCCChhHH
Q 020101 115 AILEAMEA-ELD-LVVCITEGIPQHDM 139 (331)
Q Consensus 115 ~v~~~~~~-Gi~-~ivi~t~G~~e~~~ 139 (331)
+++++... .-. .++-.+.|++.+..
T Consensus 79 v~~~l~~~l~~~~~vvs~~~gi~~~~l 105 (247)
T 3gt0_A 79 IINEIKEIIKNDAIIVTIAAGKSIEST 105 (247)
T ss_dssp HC---CCSSCTTCEEEECSCCSCHHHH
T ss_pred HHHHHHhhcCCCCEEEEecCCCCHHHH
Confidence 98776542 122 33436788875543
No 136
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.34 E-value=0.00051 Score=68.57 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=73.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee-----cCcc--cccCHHHhhhc-CCCCEEEEecChh-h
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-----LGLP--VFNTVAEAKAE-TKANASAIYVPPP-F 111 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i-----~G~p--~y~sl~dl~~~-~~iDlaii~vp~~-~ 111 (331)
..+|+|||+ |+||..+.++|.+.|++++ ..|++... +.. .|.. .+.+++|+.+. .++|++++++|+. .
T Consensus 4 ~~kIgiIGl-G~MG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 81 (484)
T 4gwg_A 4 QADIALIGL-AVMGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQA 81 (484)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHH
T ss_pred CCEEEEECh-hHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHH
Confidence 456899999 9999999999999999876 67776521 011 1322 35789888762 2489999999995 6
Q ss_pred HHHHHHHHHHcC-C-cEEEEecCCCChhHHHHHHHHHhccCCcEEEcc
Q 020101 112 AAAAILEAMEAE-L-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVGP 157 (331)
Q Consensus 112 ~~~~v~~~~~~G-i-~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGP 157 (331)
+.++++++...= - ..++..+++. ..+..++.+.+ ++.|+.+++.
T Consensus 82 v~~vl~~l~~~L~~g~iIId~st~~-~~~t~~~~~~l-~~~Gi~fvd~ 127 (484)
T 4gwg_A 82 VDDFIEKLVPLLDTGDIIIDGGNSE-YRDTTRRCRDL-KAKGILFVGS 127 (484)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHH-HHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCC-chHHHHHHHHH-HhhccccccC
Confidence 667777665531 2 2333334443 34444444444 5678887753
No 137
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=97.32 E-value=0.0027 Score=61.78 Aligned_cols=122 Identities=15% Similarity=0.154 Sum_probs=87.0
Q ss_pred CCCCEEEEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEcc-CCCcHHHHHHHH
Q 020101 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEI-GGTAEEDAAALI 257 (331)
Q Consensus 179 ~~G~valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~-~g~~~~~~~~f~ 257 (331)
..|+|++++-+|+++...++.....|.-...++-+|+.++ .-.+.+.++.+..||++++|++-+=+ +=+-..-++..+
T Consensus 262 l~G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a~-~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii 340 (395)
T 2fp4_B 262 LDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVK-ESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGIT 340 (395)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCC-HHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHH
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCCC-HHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHH
Confidence 4699999999999999999999999988889999998762 34566778889999999999985422 211122334455
Q ss_pred HHhC---CCCCEEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEe--CCHhHHHHHHH
Q 020101 258 KESG---TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVV--ESPAKIGAAML 321 (331)
Q Consensus 258 ~a~r---~~KPVvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v--~~~~el~~~~~ 321 (331)
++++ .+||||+-..|. +.+.-.+.|+++|+-.. +|++|-...+.
T Consensus 341 ~a~~~~~~~~Pivvrl~G~--------------------n~~~g~~~L~~~gl~~~~~~~~~~Aa~~~v 389 (395)
T 2fp4_B 341 KACRELELKVPLVVRLEGT--------------------NVHEAQNILTNSGLPITSAVDLEDAAKKAV 389 (395)
T ss_dssp HHHHHHTCCSCEEEEEEET--------------------THHHHHHHHHHTCSCCEECSSHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEcCCC--------------------CHHHHHHHHHHCCCceEeCCCHHHHHHHHH
Confidence 5554 689999966553 23345678888996555 66655554443
No 138
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.31 E-value=0.00065 Score=67.59 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=72.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee-------cCcccccCHHHhhhc-CCCCEEEEecChh-hH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-------LGLPVFNTVAEAKAE-TKANASAIYVPPP-FA 112 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i-------~G~p~y~sl~dl~~~-~~iDlaii~vp~~-~~ 112 (331)
.+|+|||+ |.||+.+..+|.+.|+++. .+|+.... +.+ .|+..+.+++++.+. .++|++++++|+. .+
T Consensus 3 m~IgvIG~-G~mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v 80 (482)
T 2pgd_A 3 ADIALIGL-AVMGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV 80 (482)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred CeEEEECh-HHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHH
Confidence 45889999 9999999999999999865 77775410 011 356677889887631 2689999999995 67
Q ss_pred HHHHHHHHHc-CC-cEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 113 AAAILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 113 ~~~v~~~~~~-Gi-~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
.++++++... .- +.++..+.+.. .+..++.+.+ ++.|+.+++
T Consensus 81 ~~vl~~l~~~l~~g~iII~~s~~~~-~~~~~l~~~l-~~~g~~~v~ 124 (482)
T 2pgd_A 81 DNFIEKLVPLLDIGDIIIDGGNSEY-RDTMRRCRDL-KDKGILFVG 124 (482)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCH-HHHHHHHHHH-HHTTCEEEE
T ss_pred HHHHHHHHhhcCCCCEEEECCCCCH-HHHHHHHHHH-HHcCCeEeC
Confidence 7777765542 21 34444555654 3333444444 455777653
No 139
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00061 Score=65.05 Aligned_cols=105 Identities=14% Similarity=0.171 Sum_probs=59.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecCh-hhHHHHH-HH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAI-LE 118 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~-~~~~~~v-~~ 118 (331)
+..+|.|||. |++|+.+++.+..+|++++ ..||.. +...+...+.+++++.+ +.|++++++|. +....++ ++
T Consensus 170 ~gktiGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~sl~ell~--~aDvVil~vP~t~~t~~li~~~ 243 (340)
T 4dgs_A 170 KGKRIGVLGL-GQIGRALASRAEAFGMSVR-YWNRST--LSGVDWIAHQSPVDLAR--DSDVLAVCVAASAATQNIVDAS 243 (340)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSC--CTTSCCEECSSHHHHHH--TCSEEEECC----------CHH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCc--ccccCceecCCHHHHHh--cCCEEEEeCCCCHHHHHHhhHH
Confidence 4567899999 9999999999999999977 778765 23345556779999988 79999999994 3344444 22
Q ss_pred HH-HcCCc-EEEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 119 AM-EAELD-LVVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 119 ~~-~~Gi~-~ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
.. ..+-. .+|+.+.|-. -+.+.|.+.. ++..+.
T Consensus 244 ~l~~mk~gailIN~aRG~v-vde~aL~~aL-~~g~i~ 278 (340)
T 4dgs_A 244 LLQALGPEGIVVNVARGNV-VDEDALIEAL-KSGTIA 278 (340)
T ss_dssp HHHHTTTTCEEEECSCC----------------CCSS
T ss_pred HHhcCCCCCEEEECCCCcc-cCHHHHHHHH-HcCCce
Confidence 22 22322 3455666632 3334455544 444443
No 140
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.25 E-value=0.0006 Score=67.84 Aligned_cols=110 Identities=22% Similarity=0.197 Sum_probs=72.0
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecC-------cccccCHHHhhhc-CCCCEEEEecChh
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLG-------LPVFNTVAEAKAE-TKANASAIYVPPP 110 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G-------~p~y~sl~dl~~~-~~iDlaii~vp~~ 110 (331)
++|+|||+ |.||+.+..+|.+.|+++. .+|+.... +. ..| +..+.+++++.+. .++|++++++|+.
T Consensus 2 MkIgVIG~-G~mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~ 79 (478)
T 1pgj_A 2 MDVGVVGL-GVMGANLALNIAEKGFKVA-VFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG 79 (478)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred CEEEEECh-HHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCCh
Confidence 36889999 9999999999999999865 77765310 01 124 5667788887652 1489999999995
Q ss_pred -hHHHHHHHHHHc-CC-cEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 111 -FAAAAILEAMEA-EL-DLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 111 -~~~~~v~~~~~~-Gi-~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
.+.++++++... .- +.++..+.|.. .+..++.+.+ ++.|+.+++
T Consensus 80 ~~v~~vl~~l~~~l~~g~iIId~sng~~-~~~~~l~~~l-~~~g~~~v~ 126 (478)
T 1pgj_A 80 AATDSTIEQLKKVFEKGDILVDTGNAHF-KDQGRRAQQL-EAAGLRFLG 126 (478)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECCCCCH-HHHHHHHHHH-HTTTCEEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEECCCCCh-HHHHHHHHHH-HHCCCeEEE
Confidence 677777665442 22 23344455553 3334455555 456776653
No 141
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.23 E-value=0.00049 Score=65.96 Aligned_cols=93 Identities=15% Similarity=0.072 Sum_probs=65.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee----------c------CcccccCHHHhhhcCCCCEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH----------L------GLPVFNTVAEAKAETKANAS 103 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i----------~------G~p~y~sl~dl~~~~~iDla 103 (331)
+..+|+|||+ |.||..+...|.+.|+++. .++..... +.+ . ++....++++..+ +.|++
T Consensus 28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~-l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~--~aDvV 103 (356)
T 3k96_A 28 FKHPIAILGA-GSWGTALALVLARKGQKVR-LWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE--GVTDI 103 (356)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT--TCCEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh--cCCEE
Confidence 3467899999 9999999999999998866 55554210 000 1 1334567877766 78999
Q ss_pred EEecChhhHHHHHHHHHHc-C-CcEEEEecCCCChh
Q 020101 104 AIYVPPPFAAAAILEAMEA-E-LDLVVCITEGIPQH 137 (331)
Q Consensus 104 ii~vp~~~~~~~v~~~~~~-G-i~~ivi~t~G~~e~ 137 (331)
++++|+....+++++.... . -..++..+.|+..+
T Consensus 104 ilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 104 LIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp EECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred EECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 9999999988888877643 1 13456677888654
No 142
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.21 E-value=0.00058 Score=65.63 Aligned_cols=91 Identities=9% Similarity=-0.061 Sum_probs=66.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCceecC----------------ccccc-CHHHhhhcCCCC
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHLG----------------LPVFN-TVAEAKAETKAN 101 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~~i~G----------------~p~y~-sl~dl~~~~~iD 101 (331)
.+.++|+|+||||-.|..+++.|.++. ++++.....+..|+.+.. ..+.. +.+++ . ++|
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~-~--~vD 81 (359)
T 4dpl_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM-D--DVD 81 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC-T--TCC
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh-c--CCC
Confidence 456899999999999999999888764 577766666665554321 11111 12222 2 799
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 020101 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 102 laii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~ 134 (331)
+++.++|.....+.+..+.++|++. |..++-|
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~~v-IDlSa~~ 113 (359)
T 4dpl_A 82 IIFSPLPQGAAGPVEEQFAKEGFPV-ISNSPDH 113 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEE-EECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEE-EEcCCCc
Confidence 9999999999999999999999987 5566654
No 143
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.21 E-value=0.00058 Score=65.63 Aligned_cols=91 Identities=9% Similarity=-0.061 Sum_probs=66.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCceecC----------------ccccc-CHHHhhhcCCCC
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHLG----------------LPVFN-TVAEAKAETKAN 101 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~~i~G----------------~p~y~-sl~dl~~~~~iD 101 (331)
.+.++|+|+||||-.|..+++.|.++. ++++.....+..|+.+.. ..+.. +.+++ . ++|
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~-~--~vD 81 (359)
T 4dpk_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM-D--DVD 81 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC-T--TCC
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh-c--CCC
Confidence 456899999999999999999888764 577766666665554321 11111 12222 2 799
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 020101 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 102 laii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~ 134 (331)
+++.++|.....+.+..+.++|++. |..++-|
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~~v-IDlSa~~ 113 (359)
T 4dpk_A 82 IIFSPLPQGAAGPVEEQFAKEGFPV-ISNSPDH 113 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEE-EECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEE-EEcCCCc
Confidence 9999999999999999999999987 5566654
No 144
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.18 E-value=0.00031 Score=63.41 Aligned_cols=90 Identities=16% Similarity=0.099 Sum_probs=62.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC---------------ce---ecCcccccCHHHhhhcCCCC
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG---------------TE---HLGLPVFNTVAEAKAETKAN 101 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g---------------~~---i~G~p~y~sl~dl~~~~~iD 101 (331)
....+|+|||+ |+||+.+.+.|.+.|++++ ..|++... .+ ..|...+.+++++.+ +.|
T Consensus 17 ~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~aD 92 (245)
T 3dtt_A 17 FQGMKIAVLGT-GTVGRTMAGALADLGHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA--GAE 92 (245)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH--HCS
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh--cCC
Confidence 44677899998 9999999999999999866 55654310 00 123445567888776 689
Q ss_pred EEEEecChhhHHHHHHHH-HH-cCCcEEEEecCC
Q 020101 102 ASAIYVPPPFAAAAILEA-ME-AELDLVVCITEG 133 (331)
Q Consensus 102 laii~vp~~~~~~~v~~~-~~-~Gi~~ivi~t~G 133 (331)
++++++|+....+++.+. .. ..=+.++..+.|
T Consensus 93 vVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 93 LVVNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp EEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred EEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 999999999998888765 22 122345556643
No 145
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.16 E-value=0.00057 Score=65.65 Aligned_cols=90 Identities=16% Similarity=0.112 Sum_probs=63.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCceec-------Cc---c-cccCHHHhhhcCCCCEEEEecC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHL-------GL---P-VFNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i~-------G~---p-~y~sl~dl~~~~~iDlaii~vp 108 (331)
+.++|+|+||+|..|+.+++.|.+. .+++++..++...|..+. |. . .+.+ ++..+ ++|+++.++|
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~--~vDvVf~atp 91 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFS--TVDAVFCCLP 91 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGG--GCSEEEECCC
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhc--CCCEEEEcCC
Confidence 4589999999999999999999886 468886666554332221 11 0 0111 23222 6899999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 109 PPFAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
...+.+.+..+ ++|++. |-.++-|.
T Consensus 92 ~~~s~~~a~~~-~aG~~V-Id~sa~~R 116 (359)
T 1xyg_A 92 HGTTQEIIKEL-PTALKI-VDLSADFR 116 (359)
T ss_dssp TTTHHHHHHTS-CTTCEE-EECSSTTT
T ss_pred chhHHHHHHHH-hCCCEE-EECCcccc
Confidence 99999999999 999974 55666563
No 146
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=97.16 E-value=0.0012 Score=63.90 Aligned_cols=115 Identities=13% Similarity=0.129 Sum_probs=73.2
Q ss_pred CCCeEEEEEcCCCCCCcHHHH-HHHHcC---CeEEEEeCCCCCCceec---Cc--cccc--CHHHhhhcCCCCEEEEecC
Q 020101 40 DKNTRVICQGITGKNGTFHTE-QAIEYG---TKMVGGVTPKKGGTEHL---GL--PVFN--TVAEAKAETKANASAIYVP 108 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~-~l~~~g---~~iv~~VnP~~~g~~i~---G~--p~y~--sl~dl~~~~~iDlaii~vp 108 (331)
|..++|+||||||-.|+.+++ .|.++. .+++ .+..+..|+.+. |. .+.. +.+++ . ++|+++.++|
T Consensus 2 ~~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~-~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~-~--~vDvvf~a~~ 77 (377)
T 3uw3_A 2 PGSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPV-FFSTSNAGGKAPSFAKNETTLKDATSIDDL-K--KCDVIITCQG 77 (377)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEE-EEESSCTTSBCCTTCCSCCBCEETTCHHHH-H--TCSEEEECSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEE-EEechhcCCCHHHcCCCceEEEeCCChhHh-c--CCCEEEECCC
Confidence 345789999999999999998 777766 3565 333334444432 21 1211 23333 3 6999999999
Q ss_pred hhhHHHHHHHHHHcCCc-EEEEecCCCChh-H---------HHHHHHHHhccCCc-EEEccCCC
Q 020101 109 PPFAAAAILEAMEAELD-LVVCITEGIPQH-D---------MVRVKAALNNQSKT-RLVGPNCP 160 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~-~ivi~t~G~~e~-~---------~~~l~~~a~~~~gi-~viGPnc~ 160 (331)
.....+.+..+.++|++ .+|-.++.|.-+ + .+++.. + ++.++ .|..|||.
T Consensus 78 ~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~-~-~~~~i~~Ianp~C~ 139 (377)
T 3uw3_A 78 GDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKD-A-LVNGTKNFIGGNCT 139 (377)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHH-H-HHTTCCEEEECCHH
T ss_pred hHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhh-h-hhcCCcEEEcCCHH
Confidence 99999999999999985 444445444321 1 123322 2 23565 47799984
No 147
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.15 E-value=0.0015 Score=64.32 Aligned_cols=111 Identities=17% Similarity=0.179 Sum_probs=72.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee-----------------------cCcccccCHHHhhhc
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----------------------LGLPVFNTVAEAKAE 97 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i-----------------------~G~p~y~sl~dl~~~ 97 (331)
+.++|+|||+ |.+|...+..|.+ |++++ .+|.+. +.+ .++....++++...
T Consensus 35 ~~mkIaVIGl-G~mG~~lA~~La~-G~~V~-~~D~~~--~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~- 108 (432)
T 3pid_A 35 EFMKITISGT-GYVGLSNGVLIAQ-NHEVV-ALDIVQ--AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR- 108 (432)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHT-TSEEE-EECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT-
T ss_pred CCCEEEEECc-CHHHHHHHHHHHc-CCeEE-EEecCH--HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh-
Confidence 3457999999 9999988888887 99877 666543 111 12444456777666
Q ss_pred CCCCEEEEecChh-----------hHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCC
Q 020101 98 TKANASAIYVPPP-----------FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCP 160 (331)
Q Consensus 98 ~~iDlaii~vp~~-----------~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~ 160 (331)
+.|++++++|.. .+.++++......-..+|+..+..+....+++.+.. .+.++.. .|..+
T Consensus 109 -~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l-~~~~v~~-sPe~~ 179 (432)
T 3pid_A 109 -NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERL-GIDNVIF-SPEFL 179 (432)
T ss_dssp -TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHH-TCCCEEE-CCCCC
T ss_pred -CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHH-hhccEee-cCccC
Confidence 789999999986 455565555543334455666667666666666665 4555433 56654
No 148
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=97.14 E-value=0.0075 Score=58.42 Aligned_cols=123 Identities=14% Similarity=0.202 Sum_probs=86.6
Q ss_pred CCCCEEEEecChHHHHHHHHHHHhCCCCceEEEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEcc-CCCcHHHHHHHH
Q 020101 179 KPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEI-GGTAEEDAAALI 257 (331)
Q Consensus 179 ~~G~valisQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~-~g~~~~~~~~f~ 257 (331)
..|+|++++-+|+++...++.....|.-...|+-+|+.+. .-.+.+.++.+..||++++|++.+=+ +=+-..-++..+
T Consensus 255 l~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a~-~~~~~~~~~~il~d~~v~~ilvni~ggi~~~~~vA~gii 333 (388)
T 2nu8_B 255 LDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGAT-KERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGII 333 (388)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCCC-HHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCCC-HHHHHHHHHHHhcCCCCCEEEEEecCCcCCchHHHHHHH
Confidence 4799999999999999999999999888888999998762 34556677788899999999997522 111012233344
Q ss_pred HHhC---CCCCEEEEEeCCCCCCCCCCCCCcccccCCCCCHHHHHHHHHHcCCeEe--CCHhHHHHHHHH
Q 020101 258 KESG---TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVV--ESPAKIGAAMLE 322 (331)
Q Consensus 258 ~a~r---~~KPVvv~k~Grs~~~g~~~sHtga~a~~~~g~~~~~~a~~~~aGv~~v--~~~~el~~~~~a 322 (331)
++++ .+||||+-..|. +.+.-...|++.|+-.. +|+++-...+.+
T Consensus 334 ~a~~~~~~~~pivvrl~G~--------------------n~~~g~~~l~~~g~~~~~~~~~~~aa~~~v~ 383 (388)
T 2nu8_B 334 GAVAEVGVNVPVVVRLEGN--------------------NAELGAKKLADSGLNIIAAKGLTDAAQQVVA 383 (388)
T ss_dssp HHHHHHTCCSCEEEEEEST--------------------THHHHHHHHHTTCSSEEECSSHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeCCC--------------------CHHHHHHHHHHCCCceecCCCHHHHHHHHHH
Confidence 4443 689999955553 23445678888896655 666665554443
No 149
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.10 E-value=0.0019 Score=58.92 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=66.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCCC-ce--ecCcc--cccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGG-TE--HLGLP--VFNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~g-~~--i~G~p--~y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
.+|+|||+ |+||..+.+.+.+.|+ +++ .+|++... +. -.|.. .+.+++++... +.|++++++|+....++
T Consensus 2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~aDvVilavp~~~~~~v 78 (281)
T 2g5c_A 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIY-GYDINPESISKAVDLGIIDEGTTSIAKVEDF-SPDFVMLSSPVRTFREI 78 (281)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHHHHTTSCSEEESCGGGGGGT-CCSEEEECSCHHHHHHH
T ss_pred cEEEEEec-CHHHHHHHHHHHhcCCCcEEE-EEeCCHHHHHHHHHCCCcccccCCHHHHhcC-CCCEEEEcCCHHHHHHH
Confidence 36889998 9999999999998888 766 77876410 00 13443 34567665431 48999999999999998
Q ss_pred HHHHHHc-CCcEEEEecCCCChhHHHHHHHHH
Q 020101 116 ILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 116 v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a 146 (331)
++++... .-+.+++...+......+.+.+..
T Consensus 79 ~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l 110 (281)
T 2g5c_A 79 AKKLSYILSEDATVTDQGSVKGKLVYDLENIL 110 (281)
T ss_dssp HHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred HHHHHhhCCCCcEEEECCCCcHHHHHHHHHhc
Confidence 8876542 333344444455444444555544
No 150
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=97.10 E-value=0.00046 Score=65.80 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=63.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC---------cee-------------------cC--ccccc--
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG---------TEH-------------------LG--LPVFN-- 89 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g---------~~i-------------------~G--~p~y~-- 89 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..+|..+- ++. .| ++++.
T Consensus 4 ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 4 IKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred eEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 68999999 99999999998876 78898776661000 001 11 12343
Q ss_pred CHHHhh-hcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 90 TVAEAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 90 sl~dl~-~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
+.++++ .+.++|+++.++|...+.+.+..++++|+|.+++
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVI 123 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVI 123 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEE
Confidence 566664 1127999999999999999999999999987665
No 151
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.09 E-value=0.001 Score=64.42 Aligned_cols=91 Identities=12% Similarity=0.007 Sum_probs=64.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEe-CCCCCCceecCc---------------ccccCHHH--hhhcCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGV-TPKKGGTEHLGL---------------PVFNTVAE--AKAETKAN 101 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~V-nP~~~g~~i~G~---------------p~y~sl~d--l~~~~~iD 101 (331)
+.++|+|+||||-.|..+++.|.++. +++.... ..+..|+.+..+ ..+.++++ ..+ ++|
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~--~~D 95 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFL--ECD 95 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGG--GCS
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcc--cCC
Confidence 45889999999999999999888875 5676444 565555543210 01111111 122 689
Q ss_pred EEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 020101 102 ASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 102 laii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~ 134 (331)
+++.++|.....+.+.++.++|++. |-.++-|
T Consensus 96 vvf~alp~~~s~~~~~~~~~~G~~V-IDlSa~f 127 (381)
T 3hsk_A 96 VVFSGLDADVAGDIEKSFVEAGLAV-VSNAKNY 127 (381)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEE-EECCSTT
T ss_pred EEEECCChhHHHHHHHHHHhCCCEE-EEcCCcc
Confidence 9999999999999999999999986 5567655
No 152
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=97.09 E-value=0.002 Score=61.76 Aligned_cols=111 Identities=20% Similarity=0.160 Sum_probs=77.6
Q ss_pred CCeEEEEEcCCCCCCcHHHH---HHHHc--CCeEEEEeCCCCCCcee--------cCcccccCHHHhhhcCCCCEEEEec
Q 020101 41 KNTRVICQGITGKNGTFHTE---QAIEY--GTKMVGGVTPKKGGTEH--------LGLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~---~l~~~--g~~iv~~VnP~~~g~~i--------~G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
...+++|.|- |.+|+...| .+.++ ++++++.+ +...|++. .|+|++.|++++.+. .+|++++.+
T Consensus 21 ~~~~~vi~~~-g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g~~~gipv~~d~~~al~~-~~d~lvig~ 97 (350)
T 2g0t_A 21 PGTPAAIVAW-GQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKPVRYDVPVVSSVEKAKEM-GAEVLIIGV 97 (350)
T ss_dssp TTEEEEEECT-TTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC-CCSCCBEESSHHHHHHT-TCCEEEECC
T ss_pred cCCCEEEEeC-CCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCCCCCCceeeCCHHHHHhc-CCCEEEEEe
Confidence 3567778877 888876665 34555 68999889 88766542 359999999999864 699999986
Q ss_pred Ch------hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEcc
Q 020101 108 PP------PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGP 157 (331)
Q Consensus 108 p~------~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGP 157 (331)
.+ +...+.+++|+++|... +..-.-+ ..+..++.++| +++|..+++=
T Consensus 98 a~~gg~l~~~~~~~I~~Al~~G~nV-vsglh~~-l~~~pel~~~A-~~~Gv~i~dv 150 (350)
T 2g0t_A 98 SNPGGYLEEQIATLVKKALSLGMDV-ISGLHFK-ISQQTEFLKIA-HENGTRIIDI 150 (350)
T ss_dssp CSCCHHHHHHHHHHHHHHHHTTCEE-EECCCC---CCHHHHHHHH-HHHTCCEEES
T ss_pred cCCCCCCCHHHHHHHHHHHHcCCcE-EeCChhh-hhCCHHHHHHH-HHCCCEEEEe
Confidence 22 35568899999999986 4322222 33444566766 7888887753
No 153
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.09 E-value=0.0006 Score=63.66 Aligned_cols=105 Identities=11% Similarity=0.085 Sum_probs=67.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecCh-hhHHHHH-HH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAI-LE 118 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~-~~~~~~v-~~ 118 (331)
+..+|.|||. |++|+.+++.+..+|++++ ++||.. +.........+++++.+ +.|++++++|. +....++ ++
T Consensus 121 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~~l~ell~--~aDiV~l~~P~t~~t~~li~~~ 194 (290)
T 3gvx_A 121 YGKALGILGY-GGIGRRVAHLAKAFGMRVI-AYTRSS--VDQNVDVISESPADLFR--QSDFVLIAIPLTDKTRGMVNSR 194 (290)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSSC--CCTTCSEECSSHHHHHH--HCSEEEECCCCCTTTTTCBSHH
T ss_pred ecchheeecc-CchhHHHHHHHHhhCcEEE-EEeccc--cccccccccCChHHHhh--ccCeEEEEeeccccchhhhhHH
Confidence 3567899999 9999999999999999987 778765 33333455668999987 68999999994 3333333 22
Q ss_pred HHH-cCCc-EEEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 119 AME-AELD-LVVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 119 ~~~-~Gi~-~ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
..+ .+-. .+++.+.|-. .+.++|.+.. ++.++.
T Consensus 195 ~l~~mk~gailIN~aRG~~-vd~~aL~~aL-~~g~i~ 229 (290)
T 3gvx_A 195 LLANARKNLTIVNVARADV-VSKPDMIGFL-KERSDV 229 (290)
T ss_dssp HHTTCCTTCEEEECSCGGG-BCHHHHHHHH-HHCTTC
T ss_pred HHhhhhcCceEEEeehhcc-cCCcchhhhh-hhccce
Confidence 222 2222 3444554532 2333444444 444443
No 154
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.09 E-value=0.0008 Score=61.81 Aligned_cols=88 Identities=14% Similarity=0.203 Sum_probs=62.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~ 119 (331)
.+|+|||++|+||+.+.+.|.+.|++++ .+|++... +. -.|+.+. +..++.+ +.|++++++|+..+.++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~-~~~~~~~--~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEIAPEGRDRLQGMGIPLT-DGDGWID--EADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECCSHHHHHHHHHTTCCCC-CSSGGGG--TCSEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHhcCCCcC-CHHHHhc--CCCEEEEcCCchHHHHHHHHH
Confidence 5799999999999999999999999876 77775410 01 1354443 5556655 789999999999988888876
Q ss_pred HHc-CCc-EEEEecCCC
Q 020101 120 MEA-ELD-LVVCITEGI 134 (331)
Q Consensus 120 ~~~-Gi~-~ivi~t~G~ 134 (331)
... .-. .++..+.|.
T Consensus 88 ~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 88 VPRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGGSCTTCEEEESCSHH
T ss_pred HHhCCCCCEEEECCCCc
Confidence 542 222 333355555
No 155
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.08 E-value=0.00056 Score=64.90 Aligned_cols=87 Identities=22% Similarity=0.253 Sum_probs=63.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC--c--eecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHH-
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--T--EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL- 117 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g--~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~- 117 (331)
.+|+|||+ |++|+.+.+.|.+.|++++ ..+++... + .-.|+.++ +++++.. +.|++++++|+....++++
T Consensus 17 ~~I~IIG~-G~mG~alA~~L~~~G~~V~-~~~~~~~~~~~~a~~~G~~~~-~~~e~~~--~aDvVilavp~~~~~~v~~~ 91 (338)
T 1np3_A 17 KKVAIIGY-GSQGHAHACNLKDSGVDVT-VGLRSGSATVAKAEAHGLKVA-DVKTAVA--AADVVMILTPDEFQGRLYKE 91 (338)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEE-EECCTTCHHHHHHHHTTCEEE-CHHHHHH--TCSEEEECSCHHHHHHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCcCEEE-EEECChHHHHHHHHHCCCEEc-cHHHHHh--cCCEEEEeCCcHHHHHHHHH
Confidence 46888999 9999999999999999876 66665421 0 12466655 7888776 7999999999999988887
Q ss_pred HHHHc-CCcEEEEecCCC
Q 020101 118 EAMEA-ELDLVVCITEGI 134 (331)
Q Consensus 118 ~~~~~-Gi~~ivi~t~G~ 134 (331)
+.... .-..+++...|+
T Consensus 92 ~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 92 EIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp HTGGGCCTTCEEEESCCH
T ss_pred HHHhhCCCCCEEEEcCCc
Confidence 55432 223445556665
No 156
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.04 E-value=0.00041 Score=66.04 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=64.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCC-CCCC--------ce-----------------ecC--cccc--cCH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTP-KKGG--------TE-----------------HLG--LPVF--NTV 91 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP-~~~g--------~~-----------------i~G--~p~y--~sl 91 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..+| ...+ ++ +.| ++++ .+.
T Consensus 4 ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 4 VKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 68999998 99999999988775 6899977665 1100 00 111 1234 256
Q ss_pred HHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 92 ~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
++++- +.++|+++.++|...+.+.+..++++|++.|++ +.
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~i-Sa 123 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVII-SA 123 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEE-SS
T ss_pred HHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEe-cc
Confidence 77641 237999999999999999999999999998664 54
No 157
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=97.03 E-value=0.0025 Score=61.46 Aligned_cols=112 Identities=14% Similarity=0.088 Sum_probs=71.1
Q ss_pred eEEEEEcCCCCCCcHHHH-HHHHcCC---eEEEEeCCCCCCceec---Cc-cccc---CHHHhhhcCCCCEEEEecChhh
Q 020101 43 TRVICQGITGKNGTFHTE-QAIEYGT---KMVGGVTPKKGGTEHL---GL-PVFN---TVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~-~l~~~g~---~iv~~VnP~~~g~~i~---G~-p~y~---sl~dl~~~~~iDlaii~vp~~~ 111 (331)
++|+||||||-.|+.+++ .|.++.| +++..-..+ .|+.+. |. ..+. +.+++ + ++|+++.++|...
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~~~~~~~~~~~~~~-~--~~Dvvf~a~~~~~ 76 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKDAGMLHDAFDIESL-K--QLDAVITCQGGSY 76 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSCCCBCEETTCHHHH-T--TCSEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCCceEEEecCChhHh-c--cCCEEEECCChHH
Confidence 478999999999999998 7777663 566333333 454432 21 1122 22333 3 7999999999999
Q ss_pred HHHHHHHHHHcCCc-EEEEecCCCChh-H---------HHHHHHHHhccCCc-EEEccCCC
Q 020101 112 AAAAILEAMEAELD-LVVCITEGIPQH-D---------MVRVKAALNNQSKT-RLVGPNCP 160 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~-~ivi~t~G~~e~-~---------~~~l~~~a~~~~gi-~viGPnc~ 160 (331)
..+.+..+.++|++ .+|-.++.|.-+ + .+++.. + ++.++ .|..|||.
T Consensus 77 s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~-~-~~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 77 TEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILH-G-IHHGTKTFVGGNCT 135 (370)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHH-H-HHTTCCEEEECCHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhh-h-hhcCCcEEEcCChH
Confidence 99999999999986 434344444211 1 122322 2 23565 47799984
No 158
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.02 E-value=0.00085 Score=58.48 Aligned_cols=88 Identities=15% Similarity=0.111 Sum_probs=61.5
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee---cC-------cccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LG-------LPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i---~G-------~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
+|+|+|++|++|+.+.+.|.+.|++++ .++++... +.. .+ +. +.+++++.+ +.|++++++|+..+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~D~Vi~~~~~~~~ 77 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIV-VGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAE--ACDIAVLTIPWEHA 77 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEE-EEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHH--HCSEEEECSCHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHh--cCCEEEEeCChhhH
Confidence 688999669999999999998899876 56654310 111 12 33 456777666 68999999999988
Q ss_pred HHHHHHHHHc-CCcEEEEecCCCC
Q 020101 113 AAAILEAMEA-ELDLVVCITEGIP 135 (331)
Q Consensus 113 ~~~v~~~~~~-Gi~~ivi~t~G~~ 135 (331)
.++++++... .-+.++..+.|++
T Consensus 78 ~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 78 IDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHHHHHTHHHHTTSEEEECCCCEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcC
Confidence 8887765431 2245566777876
No 159
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.01 E-value=0.00061 Score=63.49 Aligned_cols=87 Identities=13% Similarity=0.098 Sum_probs=60.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC--CCCC-cee--cC-----------ccccc--CHHHhhhcCCCCEEEE
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTP--KKGG-TEH--LG-----------LPVFN--TVAEAKAETKANASAI 105 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP--~~~g-~~i--~G-----------~p~y~--sl~dl~~~~~iDlaii 105 (331)
+|+|||+ |+||..+...|.+.|++++ .+++ +... +.+ .| +.+.. ++++..+ +.|++++
T Consensus 2 ~I~iiG~-G~mG~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~D~vi~ 77 (335)
T 1txg_A 2 IVSILGA-GAMGSALSVPLVDNGNEVR-IWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE--NAEVVLL 77 (335)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEE-EECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT--TCSEEEE
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCeEE-EEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHh--cCCEEEE
Confidence 6889999 9999999999998899876 6776 3210 001 12 13444 6666555 7899999
Q ss_pred ecChhhHHHHHHHHHHcCC-cEEEEecCCC
Q 020101 106 YVPPPFAAAAILEAMEAEL-DLVVCITEGI 134 (331)
Q Consensus 106 ~vp~~~~~~~v~~~~~~Gi-~~ivi~t~G~ 134 (331)
++|+..+.++++++...+- +.++.++.|+
T Consensus 78 ~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 78 GVSTDGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp CSCGGGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred cCChHHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 9999999888877654221 2444556687
No 160
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.00 E-value=0.00034 Score=63.18 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=61.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCC-ce---ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g-~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
+|+|||+ |+||..+.+.|.+.| +++. .+|++... +. ..|+..+.+++++. +.|++++++|+..+.+++++
T Consensus 2 ~i~iiG~-G~mG~~~a~~l~~~g~~~v~-~~~r~~~~~~~~~~~~g~~~~~~~~~~~---~~D~vi~~v~~~~~~~v~~~ 76 (263)
T 1yqg_A 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIY-IANRGAEKRERLEKELGVETSATLPELH---SDDVLILAVKPQDMEAACKN 76 (263)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEE-EECSSHHHHHHHHHHTCCEEESSCCCCC---TTSEEEECSCHHHHHHHHTT
T ss_pred EEEEECc-hHHHHHHHHHHHHCCCCeEE-EECCCHHHHHHHHHhcCCEEeCCHHHHh---cCCEEEEEeCchhHHHHHHH
Confidence 6889999 999999999998888 8765 77775410 11 13777777766654 48999999998888887765
Q ss_pred HHHcCCcEEEEecCCCCh
Q 020101 119 AMEAELDLVVCITEGIPQ 136 (331)
Q Consensus 119 ~~~~Gi~~ivi~t~G~~e 136 (331)
+.. .=+.++.++.|++.
T Consensus 77 l~~-~~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 77 IRT-NGALVLSVAAGLSV 93 (263)
T ss_dssp CCC-TTCEEEECCTTCCH
T ss_pred hcc-CCCEEEEecCCCCH
Confidence 543 32233445578875
No 161
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.99 E-value=0.0011 Score=63.45 Aligned_cols=89 Identities=13% Similarity=0.048 Sum_probs=62.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC------CeEEEEeCCCCCCceec-------C---ccccc-CHHHhhhcCCCCEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG------TKMVGGVTPKKGGTEHL-------G---LPVFN-TVAEAKAETKANASA 104 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g------~~iv~~VnP~~~g~~i~-------G---~p~y~-sl~dl~~~~~iDlai 104 (331)
.++|+|+||||..|+.+++.|.+.+ +++++....+..|+.+. + +.+.+ +.+++ . ++|+++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~-~--~~DvVf 85 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVL-G--GHDAVF 85 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHH-T--TCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHh-c--CCCEEE
Confidence 4789999999999999999998866 47775554443333221 1 11111 22222 2 689999
Q ss_pred EecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 105 IYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 105 i~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
.++|.....+.+..+ ++|++. |..++-|.
T Consensus 86 ~alg~~~s~~~~~~~-~~G~~v-IDlSa~~R 114 (352)
T 2nqt_A 86 LALPHGHSAVLAQQL-SPETLI-IDCGADFR 114 (352)
T ss_dssp ECCTTSCCHHHHHHS-CTTSEE-EECSSTTT
T ss_pred ECCCCcchHHHHHHH-hCCCEE-EEECCCcc
Confidence 999999999999999 999875 55677664
No 162
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.94 E-value=0.0028 Score=60.98 Aligned_cols=83 Identities=11% Similarity=-0.002 Sum_probs=58.1
Q ss_pred eEEEEEcCCCCCCcHHHH-HHHHcCC---eEEEEeCCCCCCceec---C--ccccc--CHHHhhhcCCCCEEEEecChhh
Q 020101 43 TRVICQGITGKNGTFHTE-QAIEYGT---KMVGGVTPKKGGTEHL---G--LPVFN--TVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~-~l~~~g~---~iv~~VnP~~~g~~i~---G--~p~y~--sl~dl~~~~~iDlaii~vp~~~ 111 (331)
++|+|+||+|..|+.+++ .+.+.++ +++ .+.....|+.+. | +.+.. +.+++ . ++|+++.++|...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~-~~~~~s~G~~v~~~~g~~i~~~~~~~~~~~-~--~~DvVf~a~g~~~ 77 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPV-FFSTSQLGQAAPSFGGTTGTLQDAFDLEAL-K--ALDIIVTCQGGDY 77 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEE-EEESSSTTSBCCGGGTCCCBCEETTCHHHH-H--TCSEEEECSCHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEE-EEEeCCCCCCccccCCCceEEEecCChHHh-c--CCCEEEECCCchh
Confidence 579999999999999999 5665554 344 333322344332 2 22222 23443 3 6999999999999
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 020101 112 AAAAILEAMEAELDLVVC 129 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~~ivi 129 (331)
..+.+..+.+.|++.+||
T Consensus 78 s~~~a~~~~~~G~k~vVI 95 (367)
T 1t4b_A 78 TNEIYPKLRESGWQGYWI 95 (367)
T ss_dssp HHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHCCCCEEEE
Confidence 999999999999975555
No 163
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.93 E-value=0.0017 Score=61.98 Aligned_cols=88 Identities=11% Similarity=0.048 Sum_probs=61.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEe-CCCCCCcee---cC-------------cccc-cCHHHhhhcCCCCEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGV-TPKKGGTEH---LG-------------LPVF-NTVAEAKAETKANAS 103 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~V-nP~~~g~~i---~G-------------~p~y-~sl~dl~~~~~iDla 103 (331)
++|+|+||+|..|+.+++.|.+. ++++++.. ++...|+.+ .+ +.+. .+.+++.+ .++|++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF-EDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-TTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-CCCCEE
Confidence 78999999999999999988876 46787555 454433332 11 1111 12333322 268999
Q ss_pred EEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 104 AIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 104 ii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
++++|...+.+.+..+.++|++. |-.+.
T Consensus 88 ~~atp~~~~~~~a~~~~~aG~~V-Id~s~ 115 (354)
T 1ys4_A 88 FSALPSDLAKKFEPEFAKEGKLI-FSNAS 115 (354)
T ss_dssp EECCCHHHHHHHHHHHHHTTCEE-EECCS
T ss_pred EECCCchHHHHHHHHHHHCCCEE-EECCc
Confidence 99999999999999999999983 43343
No 164
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.87 E-value=0.0044 Score=54.42 Aligned_cols=76 Identities=20% Similarity=0.138 Sum_probs=56.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~ 120 (331)
...+|+|||+ |+||..+.+.|.+.|++++ .+|++. + ..+ +.|++++++|+....+++++..
T Consensus 18 ~~~~I~iiG~-G~mG~~la~~l~~~g~~V~-~~~~~~--~-------------~~~--~aD~vi~av~~~~~~~v~~~l~ 78 (209)
T 2raf_A 18 QGMEITIFGK-GNMGQAIGHNFEIAGHEVT-YYGSKD--Q-------------ATT--LGEIVIMAVPYPALAALAKQYA 78 (209)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECTTC--C-------------CSS--CCSEEEECSCHHHHHHHHHHTH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEcCCH--H-------------Hhc--cCCEEEEcCCcHHHHHHHHHHH
Confidence 4567899998 9999999999999999876 777765 2 223 6899999999988888887654
Q ss_pred H-cCCcEEEEecCCCC
Q 020101 121 E-AELDLVVCITEGIP 135 (331)
Q Consensus 121 ~-~Gi~~ivi~t~G~~ 135 (331)
. ..=+.++..+.|++
T Consensus 79 ~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 79 TQLKGKIVVDITNPLN 94 (209)
T ss_dssp HHHTTSEEEECCCCBC
T ss_pred HhcCCCEEEEECCCCC
Confidence 3 22234555777876
No 165
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.87 E-value=0.0032 Score=60.59 Aligned_cols=90 Identities=16% Similarity=0.035 Sum_probs=63.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC---eEEEEeCCCCCCceec--Ccc-cccCHH-HhhhcCCCCEEEEecChhhHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT---KMVGGVTPKKGGTEHL--GLP-VFNTVA-EAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~---~iv~~VnP~~~g~~i~--G~p-~y~sl~-dl~~~~~iDlaii~vp~~~~~~ 114 (331)
.++|+|+||||..|..+++.|.+.++ ++.....++..|+.+. |.. .+..++ +..+ ++|+++.++|.....+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~--~~Dvvf~a~~~~~s~~ 79 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFE--GVDIALFSAGSSTSAK 79 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTT--TCSEEEECSCHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHhc--CCCEEEECCChHhHHH
Confidence 47899999999999999998888654 4554455655555432 211 111111 1122 6999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCC
Q 020101 115 AILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~G~ 134 (331)
.+..+.++|++. |-.++-|
T Consensus 80 ~a~~~~~~G~~v-IDlSa~~ 98 (366)
T 3pwk_A 80 YAPYAVKAGVVV-VDNTSYF 98 (366)
T ss_dssp HHHHHHHTTCEE-EECSSTT
T ss_pred HHHHHHHCCCEE-EEcCCcc
Confidence 999999999975 5567665
No 166
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.87 E-value=0.002 Score=61.16 Aligned_cols=92 Identities=17% Similarity=0.075 Sum_probs=63.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcC---CeEEEEeCCCCCCcee--cCcc-cccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYG---TKMVGGVTPKKGGTEH--LGLP-VFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g---~~iv~~VnP~~~g~~i--~G~p-~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+.++|+|+||+|..|+.+++.|.+.+ +++++..+++..|+.+ .|.. .+.+++..+- .++|+++.++|.....+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~-~~vDvVf~a~g~~~s~~ 80 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDW-SQVHIALFSAGGELSAK 80 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCG-GGCSEEEECSCHHHHHH
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHh-cCCCEEEECCCchHHHH
Confidence 35789999999999999999988763 5677555555444322 2221 1122221111 16899999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCC
Q 020101 115 AILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~G~ 134 (331)
.+..+.+.|++. |..++-|
T Consensus 81 ~a~~~~~~G~~v-Id~s~~~ 99 (336)
T 2r00_A 81 WAPIAAEAGVVV-IDNTSHF 99 (336)
T ss_dssp HHHHHHHTTCEE-EECSSTT
T ss_pred HHHHHHHcCCEE-EEcCCcc
Confidence 999999999975 4455544
No 167
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.87 E-value=0.0021 Score=61.58 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=65.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCceec--------Cccccc-CHHHhhhcCCCCEEEEecCh
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGTEHL--------GLPVFN-TVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~~i~--------G~p~y~-sl~dl~~~~~iDlaii~vp~ 109 (331)
...++|+|+||||-.|+.+++.|.+.. ++++..-..+..|+.+. .+++.+ +.+++.. ++|+++.++|.
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~--~~Dvvf~alp~ 88 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSK--NCDVLFTALPA 88 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHH--HCSEEEECCST
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhc--CCCEEEECCCc
Confidence 457999999999999999999999874 56774444554555432 122221 3444433 58999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
....+.+.++ +|++. |-.++-|.
T Consensus 89 ~~s~~~~~~~--~g~~V-IDlSsdfR 111 (351)
T 1vkn_A 89 GASYDLVREL--KGVKI-IDLGADFR 111 (351)
T ss_dssp THHHHHHTTC--CSCEE-EESSSTTT
T ss_pred HHHHHHHHHh--CCCEE-EECChhhh
Confidence 9999999988 78874 55676664
No 168
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.83 E-value=0.0011 Score=62.95 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=62.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee----------------cCcccccCHHHhhhcCCCCEEEEe
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH----------------LGLPVFNTVAEAKAETKANASAIY 106 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i----------------~G~p~y~sl~dl~~~~~iDlaii~ 106 (331)
+|+|||+ |.||..+...|.+.|+++. .+|+.... +.+ .++....+++++.+ +.|+++++
T Consensus 17 kI~iIG~-G~mG~~la~~L~~~G~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~aDvVila 92 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLSKKCREVC-VWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN--GAEIILFV 92 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHTTTEEEEE-EECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT--TCSSEEEC
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHc--CCCEEEEC
Confidence 7999999 9999999999988888866 66654310 001 02344567877665 68999999
Q ss_pred cChhhHHHHHHH----HH---Hc-CCcEEEEecCCCChhH
Q 020101 107 VPPPFAAAAILE----AM---EA-ELDLVVCITEGIPQHD 138 (331)
Q Consensus 107 vp~~~~~~~v~~----~~---~~-Gi~~ivi~t~G~~e~~ 138 (331)
+|+..+.+++++ +. .. +. .++.++.|+..+.
T Consensus 93 v~~~~~~~v~~~~~~gl~~~l~~~~~-ivv~~~~gi~~~~ 131 (366)
T 1evy_A 93 IPTQFLRGFFEKSGGNLIAYAKEKQV-PVLVCTKGIERST 131 (366)
T ss_dssp CCHHHHHHHHHHHCHHHHHHHHHHTC-CEEECCCSCCTTT
T ss_pred CChHHHHHHHHHhHHHHHHhcCccCC-EEEEECCcCCCcc
Confidence 999888888776 43 23 43 3455677876543
No 169
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.83 E-value=0.0028 Score=55.25 Aligned_cols=88 Identities=17% Similarity=0.152 Sum_probs=60.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee-cCcccc-------cCHHHhhhcCCCCEEEEecChh--
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-LGLPVF-------NTVAEAKAETKANASAIYVPPP-- 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i-~G~p~y-------~sl~dl~~~~~iDlaii~vp~~-- 110 (331)
..+|+|.|++|.+|+.+++.|.+.|++++ .++.+... ... .++..+ .+++++.+ ++|++|.+..+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVT-AVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK--GADAVISAFNPGWN 80 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEE-EECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEE-EEEcCcccchhccCceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCCCC
Confidence 46789999999999999999999999987 44333210 111 222222 23555555 799999876543
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ----------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ----------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.+|.+++
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 4566788888889988776665
No 170
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.82 E-value=0.0011 Score=62.57 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=65.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccc---cCHHHhhhcCCCCEEEEecCh-hhHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVF---NTVAEAKAETKANASAIYVPP-PFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y---~sl~dl~~~~~iDlaii~vp~-~~~~~~v 116 (331)
+..+|.|||. |++|+.+++.+..+|++++ +.|+.. +...++..+ .+++++.. +.|++++++|. +....++
T Consensus 138 ~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~-~~dr~~--~~~~~~~~~~~~~~l~ell~--~aDiV~l~~Plt~~t~~li 211 (315)
T 3pp8_A 138 EEFSVGIMGA-GVLGAKVAESLQAWGFPLR-CWSRSR--KSWPGVESYVGREELRAFLN--QTRVLINLLPNTAQTVGII 211 (315)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCCEE-EEESSC--CCCTTCEEEESHHHHHHHHH--TCSEEEECCCCCGGGTTCB
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EEcCCc--hhhhhhhhhcccCCHHHHHh--hCCEEEEecCCchhhhhhc
Confidence 3456889999 9999999999999999987 666654 333344333 57888887 78999999994 3444444
Q ss_pred -HHHHH-cCCcEE-EEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 -LEAME-AELDLV-VCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 -~~~~~-~Gi~~i-vi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
++..+ .+-..+ |+.+.|-. -+.+.|.+.. ++..+.
T Consensus 212 ~~~~l~~mk~gailIN~aRG~~-vd~~aL~~aL-~~g~i~ 249 (315)
T 3pp8_A 212 NSELLDQLPDGAYVLNLARGVH-VQEADLLAAL-DSGKLK 249 (315)
T ss_dssp SHHHHTTSCTTEEEEECSCGGG-BCHHHHHHHH-HHTSEE
T ss_pred cHHHHhhCCCCCEEEECCCChh-hhHHHHHHHH-HhCCcc
Confidence 23332 333343 33444421 2333444444 444443
No 171
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=96.77 E-value=0.0039 Score=55.03 Aligned_cols=90 Identities=17% Similarity=0.099 Sum_probs=63.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhh--cCCCCEEEEecChhh-HHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA--ETKANASAIYVPPPF-AAAAILE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~--~~~iDlaii~vp~~~-~~~~v~~ 118 (331)
..+++|+|| |..|+.+++.+++.+|++++.+|.+.....+.|+|++...+++++ +..+|.++++.|... -.++.+.
T Consensus 12 ~k~v~IiGA-Gg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~Vlg~~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~ 90 (220)
T 4ea9_A 12 IGGVVIIGG-GGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPVVGDDLALPMLREQGLSRLFVAIGDNRLRQKLGRK 90 (220)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCEEESGGGHHHHHHTTCCEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEcC-CHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeEECCHHHHHHhhcccccEEEEecCCHHHHHHHHHH
Confidence 346889999 778999999888889999988887653345889999976544432 124677888888644 4556777
Q ss_pred HHHcCCcEEEEecC
Q 020101 119 AMEAELDLVVCITE 132 (331)
Q Consensus 119 ~~~~Gi~~ivi~t~ 132 (331)
+.+.|++...++.+
T Consensus 91 l~~~g~~~~~~i~~ 104 (220)
T 4ea9_A 91 ARDHGFSLVNAIHP 104 (220)
T ss_dssp HHHTTCEECCEECT
T ss_pred HHhcCCCcCCcCCC
Confidence 88888765443343
No 172
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.76 E-value=0.0019 Score=60.52 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=66.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHHH-H
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAIL-E 118 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v~-~ 118 (331)
+..+|.|||. |++|+.+.+.+..+|++++ ..||... +. +...+.+++++.. ..|++++++|... ...++. +
T Consensus 123 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~dr~~~-~~--~~~~~~~l~ell~--~aDvV~l~~P~~~~t~~~i~~~ 195 (303)
T 1qp8_A 123 QGEKVAVLGL-GEIGTRVGKILAALGAQVR-GFSRTPK-EG--PWRFTNSLEEALR--EARAAVCALPLNKHTRGLVKYQ 195 (303)
T ss_dssp TTCEEEEESC-STHHHHHHHHHHHTTCEEE-EECSSCC-CS--SSCCBSCSHHHHT--TCSEEEECCCCSTTTTTCBCHH
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcc-cc--CcccCCCHHHHHh--hCCEEEEeCcCchHHHHHhCHH
Confidence 3567899999 9999999999999999977 7887653 22 4445668999887 7999999999763 333332 2
Q ss_pred HHH-cCC-cEEEEecCCCChhHHHHHHHHHhccCCc
Q 020101 119 AME-AEL-DLVVCITEGIPQHDMVRVKAALNNQSKT 152 (331)
Q Consensus 119 ~~~-~Gi-~~ivi~t~G~~e~~~~~l~~~a~~~~gi 152 (331)
.++ .+- ..+++.+.|-. .+..+|.+.. ++..+
T Consensus 196 ~l~~mk~gailin~srg~~-vd~~aL~~aL-~~g~i 229 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAEV-LDRDGVLRIL-KERPQ 229 (303)
T ss_dssp HHTTSCTTCEEEECSCGGG-BCHHHHHHHH-HHCTT
T ss_pred HHhhCCCCCEEEECCCCcc-cCHHHHHHHH-HhCCc
Confidence 222 222 23455555522 2333444544 44443
No 173
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.75 E-value=0.0021 Score=62.44 Aligned_cols=112 Identities=10% Similarity=0.078 Sum_probs=71.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC-C--eEEEEeCCCCCC-ce----ec-----Ccc-------cccCHHHhhhcCCCCE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG-T--KMVGGVTPKKGG-TE----HL-----GLP-------VFNTVAEAKAETKANA 102 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g-~--~iv~~VnP~~~g-~~----i~-----G~p-------~y~sl~dl~~~~~iDl 102 (331)
.+|+|+|+ |.+|+.+++.|.+.| . +++ .++.+... +. +. .+. -..+++++.++.++|+
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~-v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHIT-LASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEE-EEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEE-EEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 47889999 899999999998876 2 544 55543210 00 00 111 1335666666334899
Q ss_pred EEEecChhhHHHHHHHHHHcCCcEEEEecCCC-Ch-------hHHHHHHHHHhccCCcE-EEccCC
Q 020101 103 SAIYVPPPFAAAAILEAMEAELDLVVCITEGI-PQ-------HDMVRVKAALNNQSKTR-LVGPNC 159 (331)
Q Consensus 103 aii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~-~e-------~~~~~l~~~a~~~~gi~-viGPnc 159 (331)
+|.++|+.....+++.|++.|++.+- ++++ +. ....++.+.+ +++|+. +.|+++
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vvD--~a~~~~~~~~~~~~~~~~~l~~~a-~~aG~~~i~g~G~ 142 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYLD--TANYEHPDLAKFEYKEQWAFHDRY-KEKGVMALLGSGF 142 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEE--SSCCBCTTCSCBCSHHHHTTHHHH-HHHTCEEEECCBT
T ss_pred EEECCCcccChHHHHHHHHhCCCEEE--ecCCCCcccchhhhHHHHHHHHHH-HHhCCEEEEcCCC
Confidence 99999999999999999999999743 2232 11 1223444555 566665 556654
No 174
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.74 E-value=0.0026 Score=60.71 Aligned_cols=110 Identities=18% Similarity=0.136 Sum_probs=67.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHH-HcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChhh-HHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAI-EYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~-~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~ 115 (331)
+..+|.|||. |++|+.+.+.+. .+|++++ .+|+.....+ ..|+....+++++.. +.|++++++|... ...+
T Consensus 162 ~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVil~vp~~~~t~~l 237 (348)
T 2w2k_A 162 RGHVLGAVGL-GAIQKEIARKAVHGLGMKLV-YYDVAPADAETEKALGAERVDSLEELAR--RSDCVSVSVPYMKLTHHL 237 (348)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSCCCHHHHHHHTCEECSSHHHHHH--HCSEEEECCCCSGGGTTC
T ss_pred CCCEEEEEEE-CHHHHHHHHHHHHhcCCEEE-EECCCCcchhhHhhcCcEEeCCHHHHhc--cCCEEEEeCCCChHHHHH
Confidence 3457899999 999999999999 8999977 7787652111 136655558988877 6899999999753 3333
Q ss_pred H-H-HHHHcCCcEE-EEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 116 I-L-EAMEAELDLV-VCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 116 v-~-~~~~~Gi~~i-vi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
+ + .....+-..+ ++.+.|- ..+.++|.+.. ++..+.-.|
T Consensus 238 i~~~~l~~mk~gailin~srg~-~vd~~aL~~aL-~~~~i~gag 279 (348)
T 2w2k_A 238 IDEAFFAAMKPGSRIVNTARGP-VISQDALIAAL-KSGKLLSAG 279 (348)
T ss_dssp BCHHHHHHSCTTEEEEECSCGG-GBCHHHHHHHH-HTTSEEEEE
T ss_pred hhHHHHhcCCCCCEEEECCCCc-hhCHHHHHHHH-HhCCceEEE
Confidence 3 1 2222333333 4444442 22334455554 444444333
No 175
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.74 E-value=0.0027 Score=60.39 Aligned_cols=90 Identities=12% Similarity=0.030 Sum_probs=62.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCCCCCCce--ecCc--cccc-CHHHhhhcCCCCEEEEecChhhHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPKKGGTE--HLGL--PVFN-TVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP~~~g~~--i~G~--p~y~-sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
.++|+|+||+|+.|+.+++.|.+. .+++++..+++..|+. +.|. .+.. +.++ .. ++|+++.++|.....
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~-~~--~~DvV~~a~g~~~s~ 82 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFD-FS--SVGLAFFAAAAEVSR 82 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCC-GG--GCSEEEECSCHHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHHH-hc--CCCEEEEcCCcHHHH
Confidence 367999999999999999998854 3567755555443332 2222 1211 1222 22 689999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCC
Q 020101 114 AAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 114 ~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
+.+..+.++|++. |.++.-|.
T Consensus 83 ~~a~~~~~aG~kv-Id~Sa~~r 103 (340)
T 2hjs_A 83 AHAERARAAGCSV-IDLSGALE 103 (340)
T ss_dssp HHHHHHHHTTCEE-EETTCTTT
T ss_pred HHHHHHHHCCCEE-EEeCCCCC
Confidence 9999999999985 55676564
No 176
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.72 E-value=0.0041 Score=54.70 Aligned_cols=93 Identities=17% Similarity=0.158 Sum_probs=60.2
Q ss_pred ccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-ee--cCc-ccc-----cCHHHhhhcCCCCEEEEec
Q 020101 37 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH--LGL-PVF-----NTVAEAKAETKANASAIYV 107 (331)
Q Consensus 37 ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~i--~G~-p~y-----~sl~dl~~~~~iDlaii~v 107 (331)
.+.-+.++|+|.|++|.+|+.+++.|.+.|++++.. +.+.... +. .++ ..+ .++.+... ++|++|.+.
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~-~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~D~vi~~a 92 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAM-VRNEEQGPELRERGASDIVVANLEEDFSHAFA--SIDAVVFAA 92 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESSGGGHHHHHHTTCSEEEECCTTSCCGGGGT--TCSEEEECC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEE-ECChHHHHHHHhCCCceEEEcccHHHHHHHHc--CCCEEEECC
Confidence 333456778999999999999999999999997743 3322101 10 122 222 34555555 799999776
Q ss_pred Chh--------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 108 PPP--------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 108 p~~--------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
... ....+++.|.+.|++.+|.+++
T Consensus 93 g~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 93 GSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp CCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 532 2566788888889988777666
No 177
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.71 E-value=0.0021 Score=59.18 Aligned_cols=91 Identities=16% Similarity=0.091 Sum_probs=63.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee------------------------------cCcccccCH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------------------------------LGLPVFNTV 91 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i------------------------------~G~p~y~sl 91 (331)
..+|+|||+ |.||..+++.+.+.|++++ .+|++. +.. ..+....++
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~-l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~ 79 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVT-AYDINT--DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDL 79 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSH--HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEeCCH--HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCH
Confidence 357899999 9999999999999999876 677664 211 012445677
Q ss_pred HHhhhcCCCCEEEEecChh--hHHHHHHHHHHc-CCcEEEE-ecCCCChhH
Q 020101 92 AEAKAETKANASAIYVPPP--FAAAAILEAMEA-ELDLVVC-ITEGIPQHD 138 (331)
Q Consensus 92 ~dl~~~~~iDlaii~vp~~--~~~~~v~~~~~~-Gi~~ivi-~t~G~~e~~ 138 (331)
++... +.|++|.++|.+ ....+++++.+. .-..+++ .+++++.++
T Consensus 80 ~~~~~--~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~ 128 (283)
T 4e12_A 80 AQAVK--DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSD 128 (283)
T ss_dssp HHHTT--TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH
T ss_pred HHHhc--cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHH
Confidence 77665 799999999986 556666665543 3344443 566776543
No 178
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.69 E-value=0.0015 Score=62.53 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=69.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v- 116 (331)
+..+|.|||. |++|+.+.+.+..+|++++ ..||..... ...|...+.+++++.. ..|++++++|.. ....++
T Consensus 167 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 167 RGETLGIIGL-GRVGQAVALRAKAFGFNVL-FYDPYLSDGVERALGLQRVSTLQDLLF--HSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECTTSCTTHHHHHTCEECSSHHHHHH--HCSEEEECCCCCTTCTTSBS
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCcchhhHhhcCCeecCCHHHHHh--cCCEEEEcCCCCHHHHHHhH
Confidence 4567899999 9999999999999999977 678765211 1246655668999887 689999999974 333333
Q ss_pred HHHHH-cCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 LEAME-AELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 ~~~~~-~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
++.++ .+-.. +++.+.|-. .+.++|.+.. ++.++.
T Consensus 243 ~~~l~~mk~gailIN~arg~~-vd~~aL~~aL-~~g~i~ 279 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGL-VDEKALAQAL-KEGRIR 279 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHHHHH-HHTSEE
T ss_pred HHHHhcCCCCCEEEECCCChH-HhHHHHHHHH-HhCCCc
Confidence 23332 23333 444555532 2334455554 555555
No 179
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.68 E-value=0.0025 Score=58.99 Aligned_cols=94 Identities=11% Similarity=-0.016 Sum_probs=60.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-----e---------c------------------Ccccc
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----H---------L------------------GLPVF 88 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-----i---------~------------------G~p~y 88 (331)
+..+|+|||+ |.||..+...+.+.|++++ .+|++...-+ + . .+...
T Consensus 14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~-~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVV-LVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 3457999999 9999999999999999876 7777531000 0 1 23345
Q ss_pred cCHHHhhhcCCCCEEEEecChhh--HHHHHHHHHHc-CCcEEEE-ecCCCChhH
Q 020101 89 NTVAEAKAETKANASAIYVPPPF--AAAAILEAMEA-ELDLVVC-ITEGIPQHD 138 (331)
Q Consensus 89 ~sl~dl~~~~~iDlaii~vp~~~--~~~~v~~~~~~-Gi~~ivi-~t~G~~e~~ 138 (331)
.++++... +.|++|+++|.+. ..+++++..+. .-+.+++ .+++++.++
T Consensus 92 ~~~~~~~~--~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~ 143 (302)
T 1f0y_A 92 TDAASVVH--STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITS 143 (302)
T ss_dssp SCHHHHTT--SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHH
T ss_pred cCHHHhhc--CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHH
Confidence 67776555 7999999999864 33455554332 2233343 456776443
No 180
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.67 E-value=0.00078 Score=59.55 Aligned_cols=89 Identities=15% Similarity=0.073 Sum_probs=60.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHH-
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL- 117 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~- 117 (331)
..+|+|+|+ |++|+.+.+.+.+.|++++ .+|++... +. ..|+... +++++.+ +.|++++++|+....++++
T Consensus 28 ~~~I~iiG~-G~~G~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~-~~~~~~~--~~DvVi~av~~~~~~~v~~l 102 (215)
T 2vns_A 28 APKVGILGS-GDFARSLATRLVGSGFKVV-VGSRNPKRTARLFPSAAQVT-FQEEAVS--SPEVIFVAVFREHYSSLCSL 102 (215)
T ss_dssp -CCEEEECC-SHHHHHHHHHHHHTTCCEE-EEESSHHHHHHHSBTTSEEE-EHHHHTT--SCSEEEECSCGGGSGGGGGG
T ss_pred CCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCcee-cHHHHHh--CCCEEEECCChHHHHHHHHH
Confidence 457899997 9999999999999898866 66665310 11 1255544 6777766 7999999999876555543
Q ss_pred -HHHHcCCcEEEEecCCCChh
Q 020101 118 -EAMEAELDLVVCITEGIPQH 137 (331)
Q Consensus 118 -~~~~~Gi~~ivi~t~G~~e~ 137 (331)
... .+ +.++.++.|.+.+
T Consensus 103 ~~~~-~~-~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQL-AG-KILVDVSNPTEQE 121 (215)
T ss_dssp HHHH-TT-CEEEECCCCCHHH
T ss_pred HHhc-CC-CEEEEeCCCcccc
Confidence 222 23 4556678887543
No 181
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.0047 Score=61.26 Aligned_cols=107 Identities=10% Similarity=0.115 Sum_probs=69.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-cee---cCccc-------ccCHHHhhhcCCCCEEEEecC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TEH---LGLPV-------FNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~~i---~G~p~-------y~sl~dl~~~~~iDlaii~vp 108 (331)
+..+|+|+|+ |.+|+.+++.|.+. +++++ .+|.+... ++. .++.. +.++.++.. ++|++|.++|
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~-v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~tp 97 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVT-VACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA--DNDVVISLIP 97 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEE-EEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH--TSSEEEECSC
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEE-EEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc--CCCEEEECCc
Confidence 4567899998 99999999999887 67755 66665310 111 13221 123455555 7999999999
Q ss_pred hhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 109 PPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
......+.+.|++.|++.+ ..+ -+.+ +..++.+.| +++|+.++
T Consensus 98 ~~~~~~v~~a~l~~g~~vv-d~~-~~~p-~~~~Ll~~A-k~aGv~~i 140 (467)
T 2axq_A 98 YTFHPNVVKSAIRTKTDVV-TSS-YISP-ALRELEPEI-VKAGITVM 140 (467)
T ss_dssp GGGHHHHHHHHHHHTCEEE-ECS-CCCH-HHHHHHHHH-HHHTCEEE
T ss_pred hhhhHHHHHHHHhcCCEEE-Eee-cCCH-HHHHHHHHH-HHcCCEEE
Confidence 9888888899999998763 222 2222 234555555 56676654
No 182
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.62 E-value=0.0033 Score=54.71 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=59.2
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEe-CCCCCCceecCccc--------ccCHHHhhhcCCCCEEEEecChh----
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGV-TPKKGGTEHLGLPV--------FNTVAEAKAETKANASAIYVPPP---- 110 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~V-nP~~~g~~i~G~p~--------y~sl~dl~~~~~iDlaii~vp~~---- 110 (331)
+|+|.|++|.+|+.+++.|.+.|+++++.. ++... ....++.. ..++.++.+ ++|++|.+....
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV-PQYNNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGKSL 78 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS-CCCTTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTSSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch-hhcCCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCCCc
Confidence 688999999999999999999999987443 22211 11122222 223444444 799999877543
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.+|.+++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 2677888888999988777676
No 183
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.57 E-value=0.0079 Score=59.29 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=65.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce----------------------ecCcccccCHHHhhhcCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE----------------------HLGLPVFNTVAEAKAETK 99 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~----------------------i~G~p~y~sl~dl~~~~~ 99 (331)
++|+|||+ |.+|......|.+.|++++ .+|.+... +. ...+....+++++.+ +
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~--~ 78 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVR-CIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP--E 78 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG--G
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEE-EEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh--c
Confidence 57899999 9999999999999999977 66655310 00 011344457777665 6
Q ss_pred CCEEEEecChh----------hHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHH
Q 020101 100 ANASAIYVPPP----------FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKA 144 (331)
Q Consensus 100 iDlaii~vp~~----------~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~ 144 (331)
.|++++++|.. .+.++++..... .-..+|+..+.++....+++.+
T Consensus 79 aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~ 134 (450)
T 3gg2_A 79 ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRK 134 (450)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHH
T ss_pred CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHH
Confidence 89999999887 677777776653 2344555555565444344433
No 184
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.55 E-value=0.013 Score=48.57 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=56.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCcccc-cC---HHHhhhc--CCCCEEEEecChhh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVF-NT---VAEAKAE--TKANASAIYVPPPF 111 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p~y-~s---l~dl~~~--~~iDlaii~vp~~~ 111 (331)
..+|+|+|+ |.+|+.+++.|.+.|++++ .++++... +. -.|..++ .+ .+.+.+. .+.|+++++++.+.
T Consensus 19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 19 SKYIVIFGC-GRLGSLIANLASSSGHSVV-VVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 457889998 9999999999999999876 66544310 11 1233322 22 2222110 15899999999877
Q ss_pred HHHHHHHHHH--cCCcEEEEecCCC
Q 020101 112 AAAAILEAME--AELDLVVCITEGI 134 (331)
Q Consensus 112 ~~~~v~~~~~--~Gi~~ivi~t~G~ 134 (331)
....+..+++ .+...++..+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 6665555544 4666666555543
No 185
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.54 E-value=0.0044 Score=60.39 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=68.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH-H-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI-L- 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v-~- 117 (331)
+..++.|||. |++|+.+.+.+..+|++++ ..||... ....+...+.+++++.. ..|++++++|... ...++ +
T Consensus 144 ~gktlGiIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~ 218 (404)
T 1sc6_A 144 RGKKLGIIGY-GHIGTQLGILAESLGMYVY-FYDIENK-LPLGNATQVQHLSDLLN--MSDVVSLHVPENPSTKNMMGAK 218 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-CCCTTCEECSCHHHHHH--HCSEEEECCCSSTTTTTCBCHH
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EEcCCch-hccCCceecCCHHHHHh--cCCEEEEccCCChHHHHHhhHH
Confidence 4567899999 9999999999999999987 7888652 22233555668999988 6899999999752 33233 1
Q ss_pred HHHHcCCcE-EEEecCCCChhHHHHHHHHHhccCCc
Q 020101 118 EAMEAELDL-VVCITEGIPQHDMVRVKAALNNQSKT 152 (331)
Q Consensus 118 ~~~~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi 152 (331)
.....+-.. +++.+.|-. -+...|.+.. ++.++
T Consensus 219 ~l~~mk~ga~lIN~aRg~~-vd~~aL~~aL-~~g~i 252 (404)
T 1sc6_A 219 EISLMKPGSLLINASRGTV-VDIPALADAL-ASKHL 252 (404)
T ss_dssp HHHHSCTTEEEEECSCSSS-BCHHHHHHHH-HTTSE
T ss_pred HHhhcCCCeEEEECCCChH-HhHHHHHHHH-HcCCc
Confidence 222333333 345555532 2334455554 45444
No 186
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.52 E-value=0.0098 Score=47.47 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=57.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee---cCcccc-c---CHHHhhhc--CCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGLPVF-N---TVAEAKAE--TKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i---~G~p~y-~---sl~dl~~~--~~iDlaii~vp~~ 110 (331)
+.++|+|+|+ |.+|+.+.+.|.+.|++++ .++++... +.. .|...+ . +.+.+.+. .+.|++++++|.+
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~-~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIV-LIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 3467899999 9999999999999999876 66654310 111 244332 1 22222211 2689999999987
Q ss_pred hHHHHH-HHHHHcCCcEEEEecCCC
Q 020101 111 FAAAAI-LEAMEAELDLVVCITEGI 134 (331)
Q Consensus 111 ~~~~~v-~~~~~~Gi~~ivi~t~G~ 134 (331)
.....+ ..+.+.+.+.++..+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 81 EVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred hHHHHHHHHHHHcCCCEEEEEecCH
Confidence 654433 445556766666656554
No 187
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.49 E-value=0.005 Score=58.75 Aligned_cols=107 Identities=16% Similarity=0.097 Sum_probs=67.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-ecCcccccCHHHhhhcCCCCEEEEecCh-hhHHHHH--
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-HLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAI-- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-i~G~p~y~sl~dl~~~~~iDlaii~vp~-~~~~~~v-- 116 (331)
+..+|.|||. |++|+.+++.+..+|++++ ..||.....+ ..|...+.+++++.+ +.|++++++|. +....++
T Consensus 172 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~g~~~~~~l~ell~--~sDvV~l~~Plt~~T~~li~~ 247 (345)
T 4g2n_A 172 TGRRLGIFGM-GRIGRAIATRARGFGLAIH-YHNRTRLSHALEEGAIYHDTLDSLLG--ASDIFLIAAPGRPELKGFLDH 247 (345)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHTTTCEEE-EECSSCCCHHHHTTCEECSSHHHHHH--TCSEEEECSCCCGGGTTCBCH
T ss_pred CCCEEEEEEe-ChhHHHHHHHHHHCCCEEE-EECCCCcchhhhcCCeEeCCHHHHHh--hCCEEEEecCCCHHHHHHhCH
Confidence 4567899999 9999999999999999987 7887642111 226555569999998 79999999994 3333333
Q ss_pred HHHHHcCCcEEE-EecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 LEAMEAELDLVV-CITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 ~~~~~~Gi~~iv-i~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+.....+-..++ +.+.|-- -+.+.|.++. ++..+.
T Consensus 248 ~~l~~mk~gailIN~aRG~~-vde~aL~~aL-~~g~i~ 283 (345)
T 4g2n_A 248 DRIAKIPEGAVVINISRGDL-INDDALIEAL-RSKHLF 283 (345)
T ss_dssp HHHHHSCTTEEEEECSCGGG-BCHHHHHHHH-HHTSEE
T ss_pred HHHhhCCCCcEEEECCCCch-hCHHHHHHHH-HhCCce
Confidence 223333444433 3444421 2333445544 444444
No 188
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.47 E-value=0.0087 Score=50.81 Aligned_cols=87 Identities=18% Similarity=0.143 Sum_probs=57.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCccc-------ccCHHHhhhcCCCCEEEEecChh--
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPV-------FNTVAEAKAETKANASAIYVPPP-- 110 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~-------y~sl~dl~~~~~iDlaii~vp~~-- 110 (331)
++|+|.|++|.+|+.+++.|.+.|++++.. +.+... .. ..++.. ..+++++.+ ++|+++.+....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~ 80 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVL-VRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGTRND 80 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCCTTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeChhhcccccCCceEEEEecCCCHHHHHHHHc--CCCEEEECccCCCC
Confidence 578899999999999999999999987743 322110 00 112221 223555555 689999776532
Q ss_pred ---------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ---------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ---------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.+++.++.+++
T Consensus 81 ~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 3567778888888888776665
No 189
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.47 E-value=0.0068 Score=56.99 Aligned_cols=89 Identities=12% Similarity=0.072 Sum_probs=61.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC-------CeEEEEeCCCCC-----C-cee----------------cCcccccCHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKG-----G-TEH----------------LGLPVFNTVAE 93 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g-------~~iv~~VnP~~~-----g-~~i----------------~G~p~y~sl~d 93 (331)
.+|+|||+ |.||..+...|.+.| +++. .+++... . +.+ .++....++++
T Consensus 9 mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 9 KKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVT-MWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEE-EECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEE-EEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 57999999 999999999988877 6655 6665431 0 000 12334467777
Q ss_pred hhhcCCCCEEEEecChhhHHHHHHHHHHc-C-CcEEEEecCCCC
Q 020101 94 AKAETKANASAIYVPPPFAAAAILEAMEA-E-LDLVVCITEGIP 135 (331)
Q Consensus 94 l~~~~~iDlaii~vp~~~~~~~v~~~~~~-G-i~~ivi~t~G~~ 135 (331)
..+ +.|++++++|+....+++++.... + =..++.++.|+.
T Consensus 87 ~~~--~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 87 AAE--DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHT--TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred HHc--CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 665 789999999999888888876542 1 134555777875
No 190
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.46 E-value=0.0026 Score=60.72 Aligned_cols=90 Identities=10% Similarity=0.047 Sum_probs=62.0
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC-------CeEEEEeCCCCC-----C-cee----------------cCcccccCHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVTPKKG-----G-TEH----------------LGLPVFNTVAE 93 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g-------~~iv~~VnP~~~-----g-~~i----------------~G~p~y~sl~d 93 (331)
.+|+|||+ |+||..+...|.+.| +++. .+|+... . +.+ .++....++++
T Consensus 22 ~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 22 LKISILGS-GNWASAISKVVGTNAKNNYLFENEVR-MWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp BCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEE-EECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEE-EEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 47899999 999999999988877 7765 5555431 0 000 13445567777
Q ss_pred hhhcCCCCEEEEecChhhHHHHHHHHHH----c-CC-cEEEEecCCCCh
Q 020101 94 AKAETKANASAIYVPPPFAAAAILEAME----A-EL-DLVVCITEGIPQ 136 (331)
Q Consensus 94 l~~~~~iDlaii~vp~~~~~~~v~~~~~----~-Gi-~~ivi~t~G~~e 136 (331)
+.+ +.|++++++|+....+++++... . +- ..++.++.|++.
T Consensus 100 a~~--~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 100 VIN--DADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp HHT--TCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred HHc--CCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 665 68999999999988888887654 1 11 244556678764
No 191
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.45 E-value=0.0053 Score=57.54 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=61.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee---cCc--------------ccccCHHHhhhcCCCCEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGL--------------PVFNTVAEAKAETKANAS 103 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i---~G~--------------p~y~sl~dl~~~~~iDla 103 (331)
.++|+|||+ |.+|..+...|.+.|+++. .+++.... +.+ .++ ..+.+++++.. +.|++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~D~v 79 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVL-AWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK--DADVI 79 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT--TCSEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEE-EEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHh--cCCEE
Confidence 367999999 9999999999998899865 66664310 011 121 24567888665 79999
Q ss_pred EEecChhhHHHHHHHHHHc-CCcEEEEecCCC
Q 020101 104 AIYVPPPFAAAAILEAMEA-ELDLVVCITEGI 134 (331)
Q Consensus 104 ii~vp~~~~~~~v~~~~~~-Gi~~ivi~t~G~ 134 (331)
++++|+..+.++++++... +-..+++...|+
T Consensus 80 i~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 80 LIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999998888776542 222333333553
No 192
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.42 E-value=0.0089 Score=54.09 Aligned_cols=88 Identities=13% Similarity=0.130 Sum_probs=59.3
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--c---Cc----c-cccCHHHhhhcCCCCEEEEecChhhH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L---GL----P-VFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~---G~----p-~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
+|+|||+ |+||..+...|.+.|++++ .+|++... +.+ . |. . ...+. +..+ +.|++++++|+..+
T Consensus 2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 2 KITVLGC-GALGQLWLTALCKQGHEVQ-GWLRVPQPYCSVNLVETDGSIFNESLTANDP-DFLA--TSDLLLVTLKAWQV 76 (291)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCSEEEEEEECTTSCEEEEEEEESCH-HHHH--TCSEEEECSCGGGH
T ss_pred eEEEECc-CHHHHHHHHHHHhCCCCEE-EEEcCccceeeEEEEcCCCceeeeeeeecCc-cccC--CCCEEEEEecHHhH
Confidence 6889999 9999999999999999876 66654421 111 1 21 1 12333 3334 68999999999999
Q ss_pred HHHHHHHHHc-C-CcEEEEecCCCCh
Q 020101 113 AAAILEAMEA-E-LDLVVCITEGIPQ 136 (331)
Q Consensus 113 ~~~v~~~~~~-G-i~~ivi~t~G~~e 136 (331)
.+++++.... + -..++.++.|+..
T Consensus 77 ~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 77 SDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp HHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred HHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 8888776543 1 1234556888754
No 193
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.42 E-value=0.0076 Score=57.10 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=65.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH-H-H
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI-L-E 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v-~-~ 118 (331)
..+|.|||. |++|+.+++.+..+|++++ .+||... ........|.+++++.. ..|++++++|... ...++ + .
T Consensus 145 g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~~~~P~~~~t~~li~~~~ 219 (333)
T 1dxy_A 145 QQTVGVMGT-GHIGQVAIKLFKGFGAKVI-AYDPYPM-KGDHPDFDYVSLEDLFK--QSDVIDLHVPGIEQNTHIINEAA 219 (333)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-SSCCTTCEECCHHHHHH--HCSEEEECCCCCGGGTTSBCHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCcc-hhhHhccccCCHHHHHh--cCCEEEEcCCCchhHHHHhCHHH
Confidence 456889999 9999999999999999977 7777652 11111123568999887 6899999999643 22222 1 1
Q ss_pred HHHcCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 119 AMEAELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 119 ~~~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
....+-.. +++.+.|-. .+.+.|.+.. ++.++.
T Consensus 220 l~~mk~ga~lIn~srg~~-vd~~aL~~aL-~~g~i~ 253 (333)
T 1dxy_A 220 FNLMKPGAIVINTARPNL-IDTQAMLSNL-KSGKLA 253 (333)
T ss_dssp HHHSCTTEEEEECSCTTS-BCHHHHHHHH-HTTSEE
T ss_pred HhhCCCCcEEEECCCCcc-cCHHHHHHHH-HhCCcc
Confidence 22223333 344555532 3334555555 555554
No 194
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.42 E-value=0.01 Score=57.93 Aligned_cols=74 Identities=20% Similarity=0.169 Sum_probs=52.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee---------------------cC-cccccCHHHhhhcCCC
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---------------------LG-LPVFNTVAEAKAETKA 100 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i---------------------~G-~p~y~sl~dl~~~~~i 100 (331)
+|+|||+ |.+|..+...|.+.|++++ .+|.+... +.+ .| +....++++... +.
T Consensus 2 kI~VIG~-G~vG~~~A~~la~~G~~V~-~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~--~a 77 (436)
T 1mv8_A 2 RISIFGL-GYVGAVCAGCLSARGHEVI-GVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL--DS 77 (436)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH--TC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc--cC
Confidence 6889998 9999999999999999876 66654310 000 12 444556776665 68
Q ss_pred CEEEEecChhh----------HHHHHHHHHH
Q 020101 101 NASAIYVPPPF----------AAAAILEAME 121 (331)
Q Consensus 101 Dlaii~vp~~~----------~~~~v~~~~~ 121 (331)
|++++++|... +.+++++...
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~ 108 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGF 108 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHH
Confidence 99999998765 6777666543
No 195
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.40 E-value=0.0069 Score=59.72 Aligned_cols=106 Identities=15% Similarity=0.133 Sum_probs=67.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce----ecCcc-----c--ccCHHHhhhcCCCCEEEEecCh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE----HLGLP-----V--FNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~----i~G~p-----~--y~sl~dl~~~~~iDlaii~vp~ 109 (331)
..+|+|+|+ |.+|+.+++.|.+.|++++ .++.+... +. ..+.. + +.+++++.+ ++|++|.++|.
T Consensus 3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~-v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a~~ 78 (450)
T 1ff9_A 3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVT-VACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPY 78 (450)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEE-EEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECCC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCcCEEE-EEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEEECCcc
Confidence 356888995 9999999999998898855 55543210 01 11121 1 123445555 79999999998
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
..+..+.+.|++.|.+. +. .........++.+.| +++|+.++
T Consensus 79 ~~~~~i~~a~l~~g~~v-vd--~~~~~~~~~~l~~aA-~~aGv~~i 120 (450)
T 1ff9_A 79 TFHATVIKSAIRQKKHV-VT--TSYVSPAMMELDQAA-KDAGITVM 120 (450)
T ss_dssp -CHHHHHHHHHHHTCEE-EE--SSCCCHHHHHTHHHH-HHTTCEEE
T ss_pred ccchHHHHHHHhCCCeE-EE--eecccHHHHHHHHHH-HHCCCeEE
Confidence 87777888899998775 32 223233445666666 67887754
No 196
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.38 E-value=0.013 Score=57.93 Aligned_cols=101 Identities=14% Similarity=0.143 Sum_probs=61.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-cee---------------------cCcccccCHHHhhhc
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-TEH---------------------LGLPVFNTVAEAKAE 97 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~~i---------------------~G~p~y~sl~dl~~~ 97 (331)
..+|+|||+ |.+|..+...|.+. |++++ .+|.+... +.+ .++....++++..+
T Consensus 5 ~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~-~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~- 81 (467)
T 2q3e_A 5 IKKICCIGA-GYVGGPTCSVIAHMCPEIRVT-VVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIK- 81 (467)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH-
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHh-
Confidence 357999998 99999999999887 78876 66654310 010 13444456776665
Q ss_pred CCCCEEEEecChhh---------------HHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHHH
Q 020101 98 TKANASAIYVPPPF---------------AAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 98 ~~iDlaii~vp~~~---------------~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a 146 (331)
+.|++++++|... +.++++...+. .-..+|+..+..+....+++.+..
T Consensus 82 -~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l 145 (467)
T 2q3e_A 82 -EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIF 145 (467)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHH
T ss_pred -cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHH
Confidence 6899999987543 34555555543 333445444444433334444444
No 197
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.38 E-value=0.00055 Score=60.22 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=59.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce--ecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
+..+|.|||+ |+||+.+.+.|.+.|++++ .+|++...+. ..|+... +++++.+ +.|++++++|+....+++ +
T Consensus 18 ~~~~I~iIG~-G~mG~~la~~L~~~G~~V~-~~~r~~~~~~~~~~g~~~~-~~~~~~~--~aDvVilav~~~~~~~v~-~ 91 (201)
T 2yjz_A 18 KQGVVCIFGT-GDFGKSLGLKMLQCGYSVV-FGSRNPQVSSLLPRGAEVL-CYSEAAS--RSDVIVLAVHREHYDFLA-E 91 (201)
Confidence 4457889998 9999999999998888865 5665542111 1345544 6666665 689999999998766655 2
Q ss_pred HHHcC-CcEEEEecCCCCh
Q 020101 119 AMEAE-LDLVVCITEGIPQ 136 (331)
Q Consensus 119 ~~~~G-i~~ivi~t~G~~e 136 (331)
..... =+.++.++.|++.
T Consensus 92 l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 22111 1244556778753
No 198
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=96.38 E-value=0.0085 Score=57.16 Aligned_cols=89 Identities=9% Similarity=0.020 Sum_probs=62.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCC---eEEEEeCCCCCCceec--Ccc-cccCHHH-hhhcCCCCEEEEecChhhHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGT---KMVGGVTPKKGGTEHL--GLP-VFNTVAE-AKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~---~iv~~VnP~~~g~~i~--G~p-~y~sl~d-l~~~~~iDlaii~vp~~~~~~~ 115 (331)
++|+|+||||-.|..+++.|.++.| +++..-..+..|+.+. |.. .+.++++ .. .++|+++.++|.....+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~--~~~Dvvf~a~~~~~s~~~ 79 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADP--SGLDIALFSAGSAMSKVQ 79 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCC--TTCSEEEECSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHh--ccCCEEEECCChHHHHHH
Confidence 6899999999999999998888754 4554455666565432 210 1111111 11 268999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCC
Q 020101 116 ILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~G~ 134 (331)
+..+.++|++. |-.++-|
T Consensus 80 a~~~~~~G~~v-ID~Sa~~ 97 (344)
T 3tz6_A 80 APRFAAAGVTV-IDNSSAW 97 (344)
T ss_dssp HHHHHHTTCEE-EECSSTT
T ss_pred HHHHHhCCCEE-EECCCcc
Confidence 99999999975 5566654
No 199
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.36 E-value=0.0064 Score=54.98 Aligned_cols=87 Identities=21% Similarity=0.170 Sum_probs=59.5
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc-CCeEEEEe-CCCCCCc-eecCcccc-------cCHHHhhhcCCCCEEEEecCh----
Q 020101 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGV-TPKKGGT-EHLGLPVF-------NTVAEAKAETKANASAIYVPP---- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~-g~~iv~~V-nP~~~g~-~i~G~p~y-------~sl~dl~~~~~iDlaii~vp~---- 109 (331)
+|+|.|++|.+|+.+++.|.+. |+++++.+ +|..... .-.++.++ .+++++.+ ++|+++.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~~ 79 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSIIHPS 79 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCSH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCccc
Confidence 5889999999999999998887 88877543 3322100 01233222 23555555 79999988654
Q ss_pred ----hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 ----PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ----~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.++.+++
T Consensus 80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 80 FKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 45667888899999998776665
No 200
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.36 E-value=0.0063 Score=56.84 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=63.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-------ec----------CcccccCHHHhhhcCCCCEEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-------HL----------GLPVFNTVAEAKAETKANASAI 105 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-------i~----------G~p~y~sl~dl~~~~~iDlaii 105 (331)
.+|+|+|+ |.+|......|.+.|+++. .+++... +. +. .+.++.+.+++.+ +.|++++
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~-~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~--~~DlVil 77 (320)
T 3i83_A 3 LNILVIGT-GAIGSFYGALLAKTGHCVS-VVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET--KPDCTLL 77 (320)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHTTCEEE-EECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS--CCSEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEE-EEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC--CCCEEEE
Confidence 57899999 9999999999998898876 6665431 11 11 1234556777654 6899999
Q ss_pred ecChhhHHHHHHHHHHc-C-CcEEEEecCCCChh
Q 020101 106 YVPPPFAAAAILEAMEA-E-LDLVVCITEGIPQH 137 (331)
Q Consensus 106 ~vp~~~~~~~v~~~~~~-G-i~~ivi~t~G~~e~ 137 (331)
+||+....++++++... + -..++.++.|+..+
T Consensus 78 avK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~ 111 (320)
T 3i83_A 78 CIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE 111 (320)
T ss_dssp CCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS
T ss_pred ecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH
Confidence 99999988888776542 1 13566688899643
No 201
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=96.35 E-value=0.0023 Score=62.91 Aligned_cols=119 Identities=13% Similarity=0.192 Sum_probs=80.8
Q ss_pred ccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC---C-----CceecCcccccCHHHhhhcCCCCEEEEe
Q 020101 35 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK---G-----GTEHLGLPVFNTVAEAKAETKANASAIY 106 (331)
Q Consensus 35 ~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~---~-----g~~i~G~p~y~sl~dl~~~~~iDlaii~ 106 (331)
-++|.. .+|+|||. |..|+.+..||++.|.+++.++-|.. . ..+-.|..+++ ++|+.+ ..|++++.
T Consensus 32 ~~~lkg--K~IaVIGy-GsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~-~~eA~~--~ADvV~~L 105 (491)
T 3ulk_A 32 ASYLQG--KKVVIVGC-GAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGT-YEELIP--QADLVINL 105 (491)
T ss_dssp TGGGTT--SEEEEESC-SHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEE-HHHHGG--GCSEEEEC
T ss_pred hHHHcC--CEEEEeCC-ChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecC-HHHHHH--hCCEEEEe
Confidence 356744 56788999 99999999999999999776665431 0 01246888775 777766 68999999
Q ss_pred cChhhHHHHHHHHHHcC--CcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcc
Q 020101 107 VPPPFAAAAILEAMEAE--LDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVI 163 (331)
Q Consensus 107 vp~~~~~~~v~~~~~~G--i~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~ 163 (331)
+|.+...++.++ ++.. -...+.|+.||+-.... + + ..+.-++-++.|.++|-.
T Consensus 106 ~PD~~q~~vy~~-I~p~lk~G~~L~faHGFnI~~~~-i-~-pp~dvdVimVAPKgpG~~ 160 (491)
T 3ulk_A 106 TPDKQHSDVVRT-VQPLMKDGAALGYSHGFNIVEVG-E-Q-IRKDITVVMVAPKCPGTE 160 (491)
T ss_dssp SCGGGHHHHHHH-HGGGSCTTCEEEESSCHHHHTTC-C-C-CCTTSEEEEEEESSCHHH
T ss_pred CChhhHHHHHHH-HHhhCCCCCEEEecCcccccccc-c-c-cCCCcceEEeCCCCCcHH
Confidence 999999888876 6543 34567799999532100 0 0 002333556677777643
No 202
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.32 E-value=0.0042 Score=58.33 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=65.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v- 116 (331)
+..+|.|||. |++|+.+.+.++..|++++ .+||..... ...|.. +.+++++.. +.|++++++|... ...++
T Consensus 141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvVvl~~P~~~~t~~li~ 215 (313)
T 2ekl_A 141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVL-AYDILDIREKAEKINAK-AVSLEELLK--NSDVISLHVTVSKDAKPIID 215 (313)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHTTCE-ECCHHHHHH--HCSEEEECCCCCTTSCCSBC
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCCcchhHHHhcCce-ecCHHHHHh--hCCEEEEeccCChHHHHhhC
Confidence 3567899999 9999999999999999987 778765211 123554 348988887 6899999999543 22222
Q ss_pred HHH-HHcCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 LEA-MEAELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 ~~~-~~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
++. ...+-.. +++.+.|- -.+...|.+.. ++.++.
T Consensus 216 ~~~l~~mk~ga~lIn~arg~-~vd~~aL~~aL-~~g~i~ 252 (313)
T 2ekl_A 216 YPQFELMKDNVIIVNTSRAV-AVNGKALLDYI-KKGKVY 252 (313)
T ss_dssp HHHHHHSCTTEEEEESSCGG-GBCHHHHHHHH-HTTCEE
T ss_pred HHHHhcCCCCCEEEECCCCc-ccCHHHHHHHH-HcCCCc
Confidence 111 1223233 34445542 23344555555 455443
No 203
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.31 E-value=0.012 Score=57.55 Aligned_cols=106 Identities=11% Similarity=0.101 Sum_probs=67.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH--H
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI--L 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v--~ 117 (331)
+..+|.|||. |++|+.+.+.+..+|++++ ..||... ....+...+.+++++.. ..|++++++|... ...++ +
T Consensus 155 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~yd~~~~-~~~~~~~~~~sl~ell~--~aDvV~lhvPlt~~T~~li~~~ 229 (416)
T 3k5p_A 155 RGKTLGIVGY-GNIGSQVGNLAESLGMTVR-YYDTSDK-LQYGNVKPAASLDELLK--TSDVVSLHVPSSKSTSKLITEA 229 (416)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECTTCC-CCBTTBEECSSHHHHHH--HCSEEEECCCC-----CCBCHH
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCcch-hcccCcEecCCHHHHHh--hCCEEEEeCCCCHHHhhhcCHH
Confidence 4567899999 9999999999999999987 7787641 22334455678999998 7899999999643 33333 2
Q ss_pred HHHHcCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 118 EAMEAELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 118 ~~~~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
.....+-.. +|+.+.|-. -+...|.++. ++..+.
T Consensus 230 ~l~~mk~gailIN~aRG~v-vd~~aL~~aL-~~g~i~ 264 (416)
T 3k5p_A 230 KLRKMKKGAFLINNARGSD-VDLEALAKVL-QEGHLA 264 (416)
T ss_dssp HHHHSCTTEEEEECSCTTS-BCHHHHHHHH-HTTSEE
T ss_pred HHhhCCCCcEEEECCCChh-hhHHHHHHHH-HcCCcc
Confidence 233334334 344555532 2334455554 455544
No 204
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.30 E-value=0.013 Score=58.32 Aligned_cols=101 Identities=18% Similarity=0.128 Sum_probs=65.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--c-------C-------------cccccCHHHhhhc
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--L-------G-------------LPVFNTVAEAKAE 97 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~-------G-------------~p~y~sl~dl~~~ 97 (331)
-+++|+|||+ |.+|......|.+.|++++ ++|.+... +.+ . | +....++++..+
T Consensus 7 ~~~~I~VIG~-G~vG~~lA~~la~~G~~V~-~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~- 83 (478)
T 2y0c_A 7 GSMNLTIIGS-GSVGLVTGACLADIGHDVF-CLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA- 83 (478)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH-
T ss_pred CCceEEEECc-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh-
Confidence 4689999999 9999999999999999977 66654210 000 1 1 223345655554
Q ss_pred CCCCEEEEecCh----------hhHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHH
Q 020101 98 TKANASAIYVPP----------PFAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAA 145 (331)
Q Consensus 98 ~~iDlaii~vp~----------~~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~ 145 (331)
+.|++++++|. ..+.++++..... .-..+|+..++++....+++.+.
T Consensus 84 -~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~ 141 (478)
T 2y0c_A 84 -HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAA 141 (478)
T ss_dssp -HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHH
T ss_pred -cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHH
Confidence 58999999998 7888888776652 33455555567655443334333
No 205
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.30 E-value=0.0064 Score=52.90 Aligned_cols=86 Identities=12% Similarity=0.040 Sum_probs=57.5
Q ss_pred EEEEEcCCCCCCcHHHHHHH-HcCCeEEEEe-CCC-CCCc---eecCccc-------ccCHHHhhhcCCCCEEEEecCh-
Q 020101 44 RVICQGITGKNGTFHTEQAI-EYGTKMVGGV-TPK-KGGT---EHLGLPV-------FNTVAEAKAETKANASAIYVPP- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~-~~g~~iv~~V-nP~-~~g~---~i~G~p~-------y~sl~dl~~~~~iDlaii~vp~- 109 (331)
+|+|.|++|.+|+.+++.|. +.|++++... ++. ...+ ...++.. ..+++++.+ ++|++|.+...
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~ag~~ 84 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGAMES 84 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEESCCCC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc--CCCEEEEcCCCC
Confidence 48899999999999999999 7899977432 332 1000 1111221 223555555 79999987754
Q ss_pred --hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 --PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 --~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+ ...+++.+.+.|++.+|.+++
T Consensus 85 n~~-~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 85 GSD-MASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHH-HHHHHHHHHHTTCCEEEEEEE
T ss_pred Chh-HHHHHHHHHhcCCCeEEEEee
Confidence 3 667777888889988777665
No 206
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.28 E-value=0.0033 Score=59.29 Aligned_cols=66 Identities=9% Similarity=0.156 Sum_probs=51.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC-CCCCce--ecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP-KKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP-~~~g~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+..+|.|||. |++|+.+++.+...|++++ .+|| ...... ..|.....+++++.. +.|++++++|..
T Consensus 145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVil~~p~~ 213 (320)
T 1gdh_A 145 DNKTLGIYGF-GSIGQALAKRAQGFDMDID-YFDTHRASSSDEASYQATFHDSLDSLLS--VSQFFSLNAPST 213 (320)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSCCCHHHHHHHTCEECSSHHHHHH--HCSEEEECCCCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCCcChhhhhhcCcEEcCCHHHHHh--hCCEEEEeccCc
Confidence 4567899999 9999999999999999977 7888 652111 146654558999887 689999999964
No 207
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.28 E-value=0.0042 Score=58.34 Aligned_cols=97 Identities=15% Similarity=0.188 Sum_probs=63.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHHH-H
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAIL-E 118 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v~-~ 118 (331)
+..+|.|||. |++|+.+.+.+..+|++++ .+||... ... + .+.+++++.. +.|++++++|... ...++. +
T Consensus 143 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~--~~~-~-~~~~l~ell~--~aDvV~l~~p~~~~t~~li~~~ 214 (311)
T 2cuk_A 143 QGLTLGLVGM-GRIGQAVAKRALAFGMRVV-YHARTPK--PLP-Y-PFLSLEELLK--EADVVSLHTPLTPETHRLLNRE 214 (311)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC--SSS-S-CBCCHHHHHH--HCSEEEECCCCCTTTTTCBCHH
T ss_pred CCCEEEEEEE-CHHHHHHHHHHHHCCCEEE-EECCCCc--ccc-c-ccCCHHHHHh--hCCEEEEeCCCChHHHhhcCHH
Confidence 4567899999 9999999999999999977 7887652 212 2 3678999887 6899999999863 333332 2
Q ss_pred HHH-cCCc-EEEEecCCCChhHHHHHHHHH
Q 020101 119 AME-AELD-LVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 119 ~~~-~Gi~-~ivi~t~G~~e~~~~~l~~~a 146 (331)
..+ .+-. .+++.+.|- -.+..+|.+..
T Consensus 215 ~l~~mk~ga~lin~srg~-~vd~~aL~~aL 243 (311)
T 2cuk_A 215 RLFAMKRGAILLNTARGA-LVDTEALVEAL 243 (311)
T ss_dssp HHTTSCTTCEEEECSCGG-GBCHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCC-ccCHHHHHHHH
Confidence 222 2222 345555552 22334555555
No 208
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.26 E-value=0.0064 Score=58.17 Aligned_cols=65 Identities=15% Similarity=0.240 Sum_probs=51.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
...+|.|||. |++|+.+++.+..+|++++ ..|+.....+ ..|+..+.+++++.. +.|++++++|.
T Consensus 163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~Pl 230 (351)
T 3jtm_A 163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLL-YHDRLQMAPELEKETGAKFVEDLNEMLP--KCDVIVINMPL 230 (351)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGCCEEE-EECSSCCCHHHHHHHCCEECSCHHHHGG--GCSEEEECSCC
T ss_pred cCCEEeEEEe-CHHHHHHHHHHHHCCCEEE-EeCCCccCHHHHHhCCCeEcCCHHHHHh--cCCEEEECCCC
Confidence 4567899999 9999999999999999977 7777542111 246666678999988 78999999995
No 209
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.25 E-value=0.0055 Score=58.04 Aligned_cols=107 Identities=20% Similarity=0.225 Sum_probs=67.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce--ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v- 116 (331)
+..+|.|||. |++|+.+++.+...|++++ .+|+....+. ..|+. +.+++++.. +.|++++++|.. ....++
T Consensus 145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~e~l~--~aDiVil~vp~~~~t~~~i~ 219 (333)
T 2d0i_A 145 YGKKVGILGM-GAIGKAIARRLIPFGVKLY-YWSRHRKVNVEKELKAR-YMDIDELLE--KSDIVILALPLTRDTYHIIN 219 (333)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEE-EECSSCCHHHHHHHTEE-ECCHHHHHH--HCSEEEECCCCCTTTTTSBC
T ss_pred CcCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcchhhhhhcCce-ecCHHHHHh--hCCEEEEcCCCChHHHHHhC
Confidence 3567899999 9999999999999999977 7787652111 13544 347888876 689999999987 333333
Q ss_pred ---HHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEc
Q 020101 117 ---LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVG 156 (331)
Q Consensus 117 ---~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viG 156 (331)
....+.| .+++.+.|.. .+..+|.+.. ++..+.-.|
T Consensus 220 ~~~~~~mk~g--ilin~srg~~-vd~~aL~~aL-~~~~i~gag 258 (333)
T 2d0i_A 220 EERVKKLEGK--YLVNIGRGAL-VDEKAVTEAI-KQGKLKGYA 258 (333)
T ss_dssp HHHHHHTBTC--EEEECSCGGG-BCHHHHHHHH-HTTCBCEEE
T ss_pred HHHHhhCCCC--EEEECCCCcc-cCHHHHHHHH-HcCCceEEE
Confidence 2233445 5555555532 2233444444 444444444
No 210
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=96.23 E-value=0.017 Score=52.07 Aligned_cols=73 Identities=8% Similarity=-0.066 Sum_probs=54.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEA 119 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~ 119 (331)
|..++|+|||+ |++|..+.+.|.+.|++++ .+|.. +++ . +.| ++++|.+...++++++
T Consensus 4 ~~~mkI~IIG~-G~~G~sLA~~L~~~G~~V~-~~~~~---------------~~~-~--~aD--ilavP~~ai~~vl~~l 61 (232)
T 3dfu_A 4 APRLRVGIFDD-GSSTVNMAEKLDSVGHYVT-VLHAP---------------EDI-R--DFE--LVVIDAHGVEGYVEKL 61 (232)
T ss_dssp CCCCEEEEECC-SCCCSCHHHHHHHTTCEEE-ECSSG---------------GGG-G--GCS--EEEECSSCHHHHHHHH
T ss_pred CCCcEEEEEee-CHHHHHHHHHHHHCCCEEE-EecCH---------------HHh-c--cCC--EEEEcHHHHHHHHHHH
Confidence 44578999999 9999999999999999877 55541 233 2 468 9999999999999887
Q ss_pred HHc-CCcEEEEecCCC
Q 020101 120 MEA-ELDLVVCITEGI 134 (331)
Q Consensus 120 ~~~-Gi~~ivi~t~G~ 134 (331)
... .-..+|+-++|-
T Consensus 62 ~~~l~~g~ivvd~sgs 77 (232)
T 3dfu_A 62 SAFARRGQMFLHTSLT 77 (232)
T ss_dssp HTTCCTTCEEEECCSS
T ss_pred HHhcCCCCEEEEECCc
Confidence 753 233445444553
No 211
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.22 E-value=0.0046 Score=58.53 Aligned_cols=64 Identities=17% Similarity=0.131 Sum_probs=49.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
..+|.|||. |++|+.+++.+..+|++++ .+||... ......-.|.+++++.. +.|++++++|..
T Consensus 146 g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~~~~p~t 209 (331)
T 1xdw_A 146 NCTVGVVGL-GRIGRVAAQIFHGMGATVI-GEDVFEI-KGIEDYCTQVSLDEVLE--KSDIITIHAPYI 209 (331)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-CSCTTTCEECCHHHHHH--HCSEEEECCCCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCcc-HHHHhccccCCHHHHHh--hCCEEEEecCCc
Confidence 456889999 9999999999999999977 7787652 11111123568999887 689999999863
No 212
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.22 E-value=0.0049 Score=58.33 Aligned_cols=107 Identities=20% Similarity=0.277 Sum_probs=65.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-eecCcccccCHHHhhhcCCCCEEEEecCh-hhHHHHH-H
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EHLGLPVFNTVAEAKAETKANASAIYVPP-PFAAAAI-L 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~i~G~p~y~sl~dl~~~~~iDlaii~vp~-~~~~~~v-~ 117 (331)
+..+|.|||. |++|+.+++.+..+|++++ ++|+..... .......+.+++++.. +.|++++++|. +....++ +
T Consensus 136 ~gktvGIiGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~~~~~~l~ell~--~aDvV~l~lPlt~~t~~li~~ 211 (324)
T 3evt_A 136 TGQQLLIYGT-GQIGQSLAAKASALGMHVI-GVNTTGHPADHFHETVAFTATADALA--TANFIVNALPLTPTTHHLFST 211 (324)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSCCCCTTCSEEEEGGGCHHHHH--HCSEEEECCCCCGGGTTCBSH
T ss_pred cCCeEEEECc-CHHHHHHHHHHHhCCCEEE-EECCCcchhHhHhhccccCCHHHHHh--hCCEEEEcCCCchHHHHhcCH
Confidence 4567899999 9999999999999999987 677654111 1111223467889887 68999999994 3333333 2
Q ss_pred HHHH-cCCc-EEEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 118 EAME-AELD-LVVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 118 ~~~~-~Gi~-~ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+.++ .+-. .+|+.+.|-. -+.+.|.+.. ++..+.
T Consensus 212 ~~l~~mk~gailIN~aRG~~-vd~~aL~~aL-~~g~i~ 247 (324)
T 3evt_A 212 ELFQQTKQQPMLINIGRGPA-VDTTALMTAL-DHHQLS 247 (324)
T ss_dssp HHHHTCCSCCEEEECSCGGG-BCHHHHHHHH-HTTSCS
T ss_pred HHHhcCCCCCEEEEcCCChh-hhHHHHHHHH-HhCCce
Confidence 2232 2322 3444554432 2333455544 455444
No 213
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.22 E-value=0.0012 Score=61.24 Aligned_cols=115 Identities=15% Similarity=0.284 Sum_probs=69.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCccc--ccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPV--FNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~--y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
+..+|.|+|+ |++|+.+++.+...|.+++ .+||.....+ ..|..+ +.+++++.. +.|++++++|....-+.
T Consensus 156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~--~aDvVi~~~p~~~i~~~ 231 (300)
T 2rir_A 156 HGSQVAVLGL-GRTGMTIARTFAALGANVK-VGARSSAHLARITEMGLVPFHTDELKEHVK--DIDICINTIPSMILNQT 231 (300)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHTTCEEEEGGGHHHHST--TCSEEEECCSSCCBCHH
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHCCCeEEchhhHHHHhh--CCCEEEECCChhhhCHH
Confidence 3567899999 9999999999999999876 7777641111 125443 357888776 79999999998543221
Q ss_pred HHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE-ccCCCCcccC
Q 020101 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV-GPNCPGVIKP 165 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi-GPnc~Gi~~p 165 (331)
.-...+.| ..++.++.|-...+. +.+ ++.|++++ -||..|.+.|
T Consensus 232 ~~~~mk~g-~~lin~a~g~~~~~~----~~a-~~~G~~~i~~pg~~g~v~~ 276 (300)
T 2rir_A 232 VLSSMTPK-TLILDLASRPGGTDF----KYA-EKQGIKALLAPGLPGIVAP 276 (300)
T ss_dssp HHTTSCTT-CEEEECSSTTCSBCH----HHH-HHHTCEEEECCCHHHHHCH
T ss_pred HHHhCCCC-CEEEEEeCCCCCcCH----HHH-HHCCCEEEECCCCCCcHHH
Confidence 11222233 234555544222222 233 45677755 5665554433
No 214
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.22 E-value=0.0095 Score=57.73 Aligned_cols=98 Identities=13% Similarity=0.043 Sum_probs=61.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--cCc------------------ccccCHHHhhhcCCCCE
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGL------------------PVFNTVAEAKAETKANA 102 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~G~------------------p~y~sl~dl~~~~~iDl 102 (331)
+|+|||+ |.+|......|.+ |++++ ++|.+... +.+ .+. ....++++... +.|+
T Consensus 2 kI~VIG~-G~vG~~~A~~La~-G~~V~-~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~--~aDv 76 (402)
T 1dlj_A 2 KIAVAGS-GYVGLSLGVLLSL-QNEVT-IVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK--EAEL 76 (402)
T ss_dssp EEEEECC-SHHHHHHHHHHTT-TSEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH--HCSE
T ss_pred EEEEECC-CHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc--CCCE
Confidence 6889999 9999999998888 98876 66664310 011 122 23345655555 5899
Q ss_pred EEEecChh-----------hHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHH
Q 020101 103 SAIYVPPP-----------FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 103 aii~vp~~-----------~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a 146 (331)
+++++|+. .+.++++.....+-..+|+..+..+....+++.+..
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~ 131 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKF 131 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHT
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHh
Confidence 99999987 477777766554444555552333333344555444
No 215
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.20 E-value=0.009 Score=59.33 Aligned_cols=80 Identities=10% Similarity=0.039 Sum_probs=58.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CC---eEEEEeCCCCCCce---ecCcccc-----c-C----HHHhhhcCCCCEEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GT---KMVGGVTPKKGGTE---HLGLPVF-----N-T----VAEAKAETKANASAI 105 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~---~iv~~VnP~~~g~~---i~G~p~y-----~-s----l~dl~~~~~iDlaii 105 (331)
.+|+|+|+ |.+|+.+++.+.+. ++ +++ .+||...+.+ ..|++.. . + ++.+.. +.|++|-
T Consensus 14 ~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~-vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~--~~DvVIN 89 (480)
T 2ph5_A 14 NRFVILGF-GCVGQALMPLIFEKFDIKPSQVT-IIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLE--ENDFLID 89 (480)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHBCCCGGGEE-EEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCC--TTCEEEE
T ss_pred CCEEEECc-CHHHHHHHHHHHhCCCCceeEEE-EeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhc--CCCEEEE
Confidence 45889998 99999999887764 55 465 7787654332 1243322 2 2 334444 3499999
Q ss_pred ecChhhHHHHHHHHHHcCCcE
Q 020101 106 YVPPPFAAAAILEAMEAELDL 126 (331)
Q Consensus 106 ~vp~~~~~~~v~~~~~~Gi~~ 126 (331)
..++....++++.|+++|++.
T Consensus 90 ~s~~~~~l~Im~acleaGv~Y 110 (480)
T 2ph5_A 90 VSIGISSLALIILCNQKGALY 110 (480)
T ss_dssp CCSSSCHHHHHHHHHHHTCEE
T ss_pred CCccccCHHHHHHHHHcCCCE
Confidence 999999999999999999998
No 216
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.20 E-value=0.0097 Score=55.58 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=62.3
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC------Cce--------ecCcccccCHHHhhhcCCCCEEEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------GTE--------HLGLPVFNTVAEAKAETKANASAI 105 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~------g~~--------i~G~p~y~sl~dl~~~~~iDlaii 105 (331)
....+|+|+|+ |.+|..+...|.+.|+++....++... |-. ...+++..+.+++ + +.|++++
T Consensus 17 ~~~~kI~IiGa-Ga~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~-~--~~D~vil 92 (318)
T 3hwr_A 17 FQGMKVAIMGA-GAVGCYYGGMLARAGHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAV-Q--GADLVLF 92 (318)
T ss_dssp ---CEEEEESC-SHHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGG-T--TCSEEEE
T ss_pred ccCCcEEEECc-CHHHHHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc-C--CCCEEEE
Confidence 34567899999 999999999999889886633333210 000 1122334556554 3 6899999
Q ss_pred ecChhhHHHHHHHHHHc-C-CcEEEEecCCCChhH
Q 020101 106 YVPPPFAAAAILEAMEA-E-LDLVVCITEGIPQHD 138 (331)
Q Consensus 106 ~vp~~~~~~~v~~~~~~-G-i~~ivi~t~G~~e~~ 138 (331)
++|+....+++++.... + -..++.++.|+..++
T Consensus 93 avk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 127 (318)
T 3hwr_A 93 CVKSTDTQSAALAMKPALAKSALVLSLQNGVENAD 127 (318)
T ss_dssp CCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHH
T ss_pred EcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH
Confidence 99999998888876542 1 134566889997543
No 217
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.17 E-value=0.009 Score=54.65 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=59.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--cCcccc------------cCHHHhhhc-CCCCEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVF------------NTVAEAKAE-TKANASAIY 106 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~G~p~y------------~sl~dl~~~-~~iDlaii~ 106 (331)
++|+|||+ |++|..+...|.+.|++++ .++++... +.+ .|+... .+.+++.+. .+.|+++++
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~-~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 4 MKIAIAGA-GAMGSRLGIMLHQGGNDVT-LIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCcEE-EEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 57899999 9999999999999999876 66664310 010 132211 122333210 168999999
Q ss_pred cChhhHHHHHHHHHHc-C-CcEEEEecCCCCh
Q 020101 107 VPPPFAAAAILEAMEA-E-LDLVVCITEGIPQ 136 (331)
Q Consensus 107 vp~~~~~~~v~~~~~~-G-i~~ivi~t~G~~e 136 (331)
+|+....+++++.... + -+.++.++.|+..
T Consensus 82 v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 82 TKAQQLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp SCHHHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred eccccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 9999988888776543 2 2345556778863
No 218
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.17 E-value=0.0019 Score=59.75 Aligned_cols=115 Identities=16% Similarity=0.273 Sum_probs=69.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCccc--ccCHHHhhhcCCCCEEEEecChhhHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPV--FNTVAEAKAETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~--y~sl~dl~~~~~iDlaii~vp~~~~~~~ 115 (331)
+..+|.|+|+ |++|+.+++.+..+|.+++ .+||.....+ ..|... +.+++++.. +.|++++++|.....+.
T Consensus 154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~--~aDvVi~~~p~~~i~~~ 229 (293)
T 3d4o_A 154 HGANVAVLGL-GRVGMSVARKFAALGAKVK-VGARESDLLARIAEMGMEPFHISKAAQELR--DVDVCINTIPALVVTAN 229 (293)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESSHHHHHHHHHTTSEEEEGGGHHHHTT--TCSEEEECCSSCCBCHH
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCEEE-EEECCHHHHHHHHHCCCeecChhhHHHHhc--CCCEEEECCChHHhCHH
Confidence 3567899998 9999999999999999876 7777641111 134443 356777776 79999999997543222
Q ss_pred HHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE-ccCCCCcccC
Q 020101 116 ILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV-GPNCPGVIKP 165 (331)
Q Consensus 116 v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi-GPnc~Gi~~p 165 (331)
.-+..+.| ..+++++.|-...+. +.+ ++.|++++ -||..+.+.|
T Consensus 230 ~l~~mk~~-~~lin~ar~~~~~~~----~~a-~~~Gv~~~~~~~l~~~v~p 274 (293)
T 3d4o_A 230 VLAEMPSH-TFVIDLASKPGGTDF----RYA-EKRGIKALLVPGLPGIVAP 274 (293)
T ss_dssp HHHHSCTT-CEEEECSSTTCSBCH----HHH-HHHTCEEEECCCHHHHHCH
T ss_pred HHHhcCCC-CEEEEecCCCCCCCH----HHH-HHCCCEEEECCCCCcccCH
Confidence 22223333 234445544322222 223 45677765 4665555544
No 219
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.17 E-value=0.0049 Score=59.91 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=67.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v 116 (331)
+..+|.|||. |++|+.+++.++.+|++++ ..|+.....+ ..|+..+.+++++.. +.|++++++|.. ....++
T Consensus 190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~-~~d~~~~~~~~~~~~G~~~~~~l~ell~--~aDvV~l~~Plt~~t~~li 265 (393)
T 2nac_A 190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLH-YTDRHRLPESVEKELNLTWHATREDMYP--VCDVVTLNCPLHPETEHMI 265 (393)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEE-EECSSCCCHHHHHHHTCEECSSHHHHGG--GCSEEEECSCCCTTTTTCB
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEE-EEcCCccchhhHhhcCceecCCHHHHHh--cCCEEEEecCCchHHHHHh
Confidence 4567899999 9999999999999999977 7777642121 246666678999987 789999999953 223333
Q ss_pred -HHHHH-cCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 -LEAME-AELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 -~~~~~-~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
++.++ .+-.. +|+.+.|- --+...|.++. ++..+.
T Consensus 266 ~~~~l~~mk~gailIN~aRG~-~vde~aL~~aL-~~g~i~ 303 (393)
T 2nac_A 266 NDETLKLFKRGAYIVNTARGK-LCDRDAVARAL-ESGRLA 303 (393)
T ss_dssp SHHHHTTSCTTEEEEECSCGG-GBCHHHHHHHH-HTTSEE
T ss_pred hHHHHhhCCCCCEEEECCCch-HhhHHHHHHHH-HcCCee
Confidence 22222 23333 34444442 22334455555 454443
No 220
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.16 E-value=0.018 Score=56.84 Aligned_cols=102 Identities=23% Similarity=0.236 Sum_probs=65.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee-c--------------------C-cccccCHHHhhhc
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-L--------------------G-LPVFNTVAEAKAE 97 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i-~--------------------G-~p~y~sl~dl~~~ 97 (331)
-+++++|||. |.||......|.+.|++++ ++|.+... +.+ . | +..-.++++..+
T Consensus 7 ~~~~~~vIGl-G~vG~~~A~~La~~G~~V~-~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~- 83 (446)
T 4a7p_A 7 GSVRIAMIGT-GYVGLVSGACFSDFGHEVV-CVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK- 83 (446)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT-
T ss_pred CceEEEEEcC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh-
Confidence 4789999999 9999999999999999977 54443310 110 1 1 334456766666
Q ss_pred CCCCEEEEecChh-----------hHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHHH
Q 020101 98 TKANASAIYVPPP-----------FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 98 ~~iDlaii~vp~~-----------~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a 146 (331)
+.|++++++|.. .+.++++...+. .-..+|+..++++....+++.+..
T Consensus 84 -~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l 143 (446)
T 4a7p_A 84 -DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERII 143 (446)
T ss_dssp -TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHH
T ss_pred -cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHH
Confidence 789999996654 367777666543 223445556677665555555444
No 221
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.15 E-value=0.00038 Score=63.88 Aligned_cols=89 Identities=11% Similarity=0.031 Sum_probs=54.2
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-c---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-T---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
++|+|||+ |+||+.+.+.+.+. ++++..+|++... + +..|. .+.+++++.+ +.|++++++|++.+.+++++
T Consensus 3 m~I~iIG~-G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~--~~DvVilav~~~~~~~v~~~ 77 (276)
T 2i76_A 3 LVLNFVGT-GTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPE--LNGVVFVIVPDRYIKTVANH 77 (276)
T ss_dssp -CCEEESC-CHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC-----CEEECSCTTTHHHHHTT
T ss_pred ceEEEEeC-CHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHh--cCCEEEEeCChHHHHHHHHH
Confidence 46889999 99999999888776 7764456665410 1 12355 6667777665 68999999999998888876
Q ss_pred HHHcCCcEEEEecCCCChh
Q 020101 119 AMEAELDLVVCITEGIPQH 137 (331)
Q Consensus 119 ~~~~Gi~~ivi~t~G~~e~ 137 (331)
+...+ +.++..+.+++.+
T Consensus 78 l~~~~-~ivi~~s~~~~~~ 95 (276)
T 2i76_A 78 LNLGD-AVLVHCSGFLSSE 95 (276)
T ss_dssp TCCSS-CCEEECCSSSCGG
T ss_pred hccCC-CEEEECCCCCcHH
Confidence 54122 3334444466544
No 222
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.14 E-value=0.017 Score=52.82 Aligned_cols=86 Identities=10% Similarity=0.079 Sum_probs=60.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-------ecCcccccCHHHhhhcCCCCEEEEecCh------
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-------HLGLPVFNTVAEAKAETKANASAIYVPP------ 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-------i~G~p~y~sl~dl~~~~~iDlaii~vp~------ 109 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++....... .. ...+. ..+++++.+ ++|++|-+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~~~~~~~ 78 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KAINDYEYRVSDYT-LEDLINQLN--DVDAVVHLAATRGSQGK 78 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTT--TCSEEEECCCCCCSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-ccCCceEEEEcccc-HHHHHHhhc--CCCEEEEccccCCCCCh
Confidence 468899999999999999999999998855433111 11 12333 445666666 79999977542
Q ss_pred --------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 --------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 --------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 79 ISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 23467788888899998776664
No 223
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.14 E-value=0.0059 Score=57.99 Aligned_cols=105 Identities=14% Similarity=0.150 Sum_probs=66.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v- 116 (331)
+..+|.|||. |++|+.+++.++.+|++++ .+||..... ...|+. +.+++++.. +.|++++++|... ...++
T Consensus 164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~ 238 (335)
T 2g76_A 164 NGKTLGILGL-GRIGREVATRMQSFGMKTI-GYDPIISPEVSASFGVQ-QLPLEEIWP--LCDFITVHTPLLPSTTGLLN 238 (335)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSSCHHHHHHTTCE-ECCHHHHGG--GCSEEEECCCCCTTTTTSBC
T ss_pred CcCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCcchhhhhhcCce-eCCHHHHHh--cCCEEEEecCCCHHHHHhhC
Confidence 4567899999 9999999999999999987 788865211 123553 458999887 7899999999754 33333
Q ss_pred HHHHH-cCCcEE-EEecCCCChhHHHHHHHHHhccCCc
Q 020101 117 LEAME-AELDLV-VCITEGIPQHDMVRVKAALNNQSKT 152 (331)
Q Consensus 117 ~~~~~-~Gi~~i-vi~t~G~~e~~~~~l~~~a~~~~gi 152 (331)
++.++ .+-..+ ++.+.|-. -+..+|.+.. ++..+
T Consensus 239 ~~~l~~mk~gailIN~arg~v-vd~~aL~~aL-~~g~i 274 (335)
T 2g76_A 239 DNTFAQCKKGVRVVNCARGGI-VDEGALLRAL-QSGQC 274 (335)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHHHHH-HHTSE
T ss_pred HHHHhhCCCCcEEEECCCccc-cCHHHHHHHH-HhCCc
Confidence 22222 233333 44455532 2334455544 44443
No 224
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.13 E-value=0.0062 Score=58.10 Aligned_cols=64 Identities=17% Similarity=0.184 Sum_probs=50.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
+..+|.|||. |++|+.+++.++.+|++++ ++||... ....+.-.|.+++++.. +.|++++++|.
T Consensus 147 ~gktvgIiGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~l~~Pl 210 (343)
T 2yq5_A 147 YNLTVGLIGV-GHIGSAVAEIFSAMGAKVI-AYDVAYN-PEFEPFLTYTDFDTVLK--EADIVSLHTPL 210 (343)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-GGGTTTCEECCHHHHHH--HCSEEEECCCC
T ss_pred CCCeEEEEec-CHHHHHHHHHHhhCCCEEE-EECCChh-hhhhccccccCHHHHHh--cCCEEEEcCCC
Confidence 3457899999 9999999999999999987 7887652 22222234558999987 68999999994
No 225
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.13 E-value=0.0037 Score=58.20 Aligned_cols=90 Identities=10% Similarity=0.034 Sum_probs=59.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-e------------cCcccc-------cCHHHhhhcCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-H------------LGLPVF-------NTVAEAKAETKA 100 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-i------------~G~p~y-------~sl~dl~~~~~i 100 (331)
+..+|+|.|++|-+|+.+++.|.+.|+++++.......... . .++..+ .+++++.+ ++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CC
Confidence 45789999999999999999999999998855432211010 0 122222 23555555 79
Q ss_pred CEEEEecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 101 NASAIYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 101 Dlaii~vp~------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
|++|-+... .....+++.|.+.|++.+|.+++
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 999977642 11334788888899988776654
No 226
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.13 E-value=0.008 Score=58.24 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=69.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-C-CeEEEE-eCCCCC---------C-ce--ecC---------------cccc---
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-G-TKMVGG-VTPKKG---------G-TE--HLG---------------LPVF--- 88 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g-~~iv~~-VnP~~~---------g-~~--i~G---------------~p~y--- 88 (331)
.++|+|+|+||.+|+.+++.+.++ + |++++. .+.+.. + +. +.. ..++
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g~ 83 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA 83 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeCc
Confidence 378999999999999999988875 4 787744 332210 0 00 011 1111
Q ss_pred cCHHHhhhcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCCh-hHHHHHHHHHhccCCcEEE
Q 020101 89 NTVAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQ-HDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 89 ~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e-~~~~~l~~~a~~~~gi~vi 155 (331)
..+.++.... +|+++.+++.........+|+++|.+. + ....-+. .....+.+.| +++|+.++
T Consensus 84 ~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~V-v-lANKE~lv~~G~~l~~~A-~~~gv~li 147 (388)
T 1r0k_A 84 DALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTV-A-LANKESLVSAGGLMIDAV-REHGTTLL 147 (388)
T ss_dssp HHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEE-E-ECCSHHHHTTHHHHHHHH-HHHTCEEE
T ss_pred cHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEE-E-EeCcHHHHhhHHHHHHHH-HHcCCEEE
Confidence 1133455545 999999998888888889999999775 3 2333111 1234566666 78887775
No 227
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.08 E-value=0.023 Score=52.76 Aligned_cols=90 Identities=10% Similarity=0.060 Sum_probs=61.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC------Cceec---------CcccccCHHHhhhcCCCCEEEEec
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------GTEHL---------GLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~------g~~i~---------G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
.+|+|+|+ |.+|..+...|.+.|.++. .++++.. |-.+. .++++.+.+++ . +.|++++++
T Consensus 3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~-~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~-~--~~D~vilav 77 (312)
T 3hn2_A 3 LRIAIVGA-GALGLYYGALLQRSGEDVH-FLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEEI-G--PMDLVLVGL 77 (312)
T ss_dssp -CEEEECC-STTHHHHHHHHHHTSCCEE-EECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHHH-C--CCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEE-EEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHHc-C--CCCEEEEec
Confidence 46889999 9999999999998888866 5554421 10111 12334566664 3 689999999
Q ss_pred ChhhHHHHHHHHHHc-C-CcEEEEecCCCChh
Q 020101 108 PPPFAAAAILEAMEA-E-LDLVVCITEGIPQH 137 (331)
Q Consensus 108 p~~~~~~~v~~~~~~-G-i~~ivi~t~G~~e~ 137 (331)
|+....++++++... + -..++.++.|+..+
T Consensus 78 k~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~ 109 (312)
T 3hn2_A 78 KTFANSRYEELIRPLVEEGTQILTLQNGLGNE 109 (312)
T ss_dssp CGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH
T ss_pred CCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH
Confidence 999998888887543 2 23556688899643
No 228
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.0081 Score=58.31 Aligned_cols=94 Identities=13% Similarity=0.068 Sum_probs=62.1
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcCC--------e-EEEEeCCCCCCc--------------------eecCccccc
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYGT--------K-MVGGVTPKKGGT--------------------EHLGLPVFN 89 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g~--------~-iv~~VnP~~~g~--------------------~i~G~p~y~ 89 (331)
.+|+.||+|+|+ |.+|+++...+.+.|. + .++.-++....+ --..+...+
T Consensus 31 ~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~ 109 (391)
T 4fgw_A 31 AEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANP 109 (391)
T ss_dssp --CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEES
T ss_pred cCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeC
Confidence 467789999999 9999999887765431 2 222333321100 012345566
Q ss_pred CHHHhhhcCCCCEEEEecChhhHHHHHHHHHHcC--CcEEEEecCCCC
Q 020101 90 TVAEAKAETKANASAIYVPPPFAAAAILEAMEAE--LDLVVCITEGIP 135 (331)
Q Consensus 90 sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~G--i~~ivi~t~G~~ 135 (331)
++++..+ +.|++|+++|.+...+++++....- -..+|..+-|+.
T Consensus 110 dl~~al~--~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 110 DLIDSVK--DVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp CHHHHHT--TCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred CHHHHHh--cCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 7888887 7999999999999999999876431 233455777884
No 229
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.06 E-value=0.0019 Score=58.75 Aligned_cols=103 Identities=15% Similarity=0.079 Sum_probs=65.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCcccccCHHHhhhcCCCCEEEEecChhhHH---
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAA--- 113 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~--- 113 (331)
+. +|+|+|+ |.+|+.+.+.+.+.|++++ .+|++... ++ ..|.. +.+++++ . +.|+++.++|+..++
T Consensus 116 ~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~-v~~r~~~~~~~l~~~~~~~-~~~~~~~-~--~~Divi~~tp~~~~~~~~ 188 (263)
T 2d5c_A 116 KG-PALVLGA-GGAGRAVAFALREAGLEVW-VWNRTPQRALALAEEFGLR-AVPLEKA-R--EARLLVNATRVGLEDPSA 188 (263)
T ss_dssp CS-CEEEECC-SHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHHTCE-ECCGGGG-G--GCSEEEECSSTTTTCTTC
T ss_pred CC-eEEEECC-cHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHhccc-hhhHhhc-c--CCCEEEEccCCCCCCCCC
Confidence 45 7899999 8999999999999888654 78876411 11 12444 6678787 5 799999999988643
Q ss_pred HHH-HHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 114 AAI-LEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 114 ~~v-~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
..+ .++++.|. .++-+..+ +.+. ++.+.+ ++.|++++
T Consensus 189 ~~l~~~~l~~g~-~viD~~~~-p~~t--~l~~~a-~~~g~~~v 226 (263)
T 2d5c_A 189 SPLPAELFPEEG-AAVDLVYR-PLWT--RFLREA-KAKGLKVQ 226 (263)
T ss_dssp CSSCGGGSCSSS-EEEESCCS-SSSC--HHHHHH-HHTTCEEE
T ss_pred CCCCHHHcCCCC-EEEEeecC-Cccc--HHHHHH-HHCcCEEE
Confidence 222 23333443 22333333 2222 355555 66788877
No 230
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.03 E-value=0.0064 Score=56.91 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=50.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChhh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
+..+|.|||. |++|+.+.+.+...|++++ .+||....+ ...|+.. .+++++.. +.|++++++|...
T Consensus 141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~-~~l~ell~--~aDvV~l~~p~~~ 208 (307)
T 1wwk_A 141 EGKTIGIIGF-GRIGYQVAKIANALGMNIL-LYDPYPNEERAKEVNGKF-VDLETLLK--ESDVVTIHVPLVE 208 (307)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHTTCEE-CCHHHHHH--HCSEEEECCCCST
T ss_pred CCceEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCCChhhHhhcCccc-cCHHHHHh--hCCEEEEecCCCh
Confidence 3457899999 9999999999999999977 788765211 1235543 47988887 6899999999643
No 231
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.02 E-value=0.0062 Score=57.64 Aligned_cols=66 Identities=12% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce--ecCcccccCHHHhhhcCCCCEEEEecChhh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~--i~G~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
...+|+|||+ |++|+.+++.+...|++++ .+|+....+. ..|+. +.+++++.. +.|++++++|...
T Consensus 149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~-~~~l~~~l~--~aDvVil~vp~~~ 216 (334)
T 2dbq_A 149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRIL-YYSRTRKEEVERELNAE-FKPLEDLLR--ESDFVVLAVPLTR 216 (334)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHCCE-ECCHHHHHH--HCSEEEECCCCCT
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHhCCCEEE-EECCCcchhhHhhcCcc-cCCHHHHHh--hCCEEEECCCCCh
Confidence 3457899999 9999999999999999977 7787652111 13444 458888877 6899999999865
No 232
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.02 E-value=0.015 Score=51.24 Aligned_cols=88 Identities=11% Similarity=0.073 Sum_probs=57.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEe-CCCCCCcee--cCcccc-------cCHHHhhhcCCCCEEEEecChh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGV-TPKKGGTEH--LGLPVF-------NTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~V-nP~~~g~~i--~G~p~y-------~sl~dl~~~~~iDlaii~vp~~ 110 (331)
..+|+|.|++|.+|+.+++.|.+.| ++++... ++... .+. .++..+ .+++++.+ .+|++|.+....
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a~~~ 99 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-HKPYPTNSQIIMGDVLNHAALKQAMQ--GQDIVYANLTGE 99 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-CSSCCTTEEEEECCTTCHHHHHHHHT--TCSEEEEECCST
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-cccccCCcEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC
Confidence 4678899999999999999999998 7876432 32211 110 122222 23555555 789999776543
Q ss_pred ----hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ----FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ----~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.+..+++.+.+.|++.+|.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 100 DLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred chhHHHHHHHHHHHHcCCCEEEEEec
Confidence 2445677777888888887776
No 233
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=96.02 E-value=0.02 Score=55.05 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=70.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEE---------------eCCCCCCceecCccccc-----------CHHHhh
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGG---------------VTPKKGGTEHLGLPVFN-----------TVAEAK 95 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~---------------VnP~~~g~~i~G~p~y~-----------sl~dl~ 95 (331)
++|+|+|++|.+|+..++.+.++ .|++++. .+|+.. .+..-..|. .+.++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~v--~v~~~~~~~~~l~~~~~G~~~l~el~ 81 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKNV--AITGDVEFEDSSINVWKGSHSIEEML 81 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCEE--EECSSCCCCCSSSEEEESTTHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCEE--EEccHHHHHHHHHHHccCHHHHHHHh
Confidence 67899999999999999988886 6888865 233221 111112221 134555
Q ss_pred hcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCCh-hHHHHHHHHHhccCCcEEE
Q 020101 96 AETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQ-HDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 96 ~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e-~~~~~l~~~a~~~~gi~vi 155 (331)
...++|+++.+++......-...++++|.+. . ++..-+- .....+.+.+ +++|.+++
T Consensus 82 ~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~v-a-LANKEsLV~aG~li~~~a-~~~g~~ll 139 (376)
T 3a06_A 82 EALKPDITMVAVSGFSGLRAVLASLEHSKRV-C-LANKESLVCGGFLVKKKL-KEKGTELI 139 (376)
T ss_dssp HHHCCSEEEECCCSTTHHHHHHHHHHHCSEE-E-ECCSHHHHHHHHHHHHHH-HHHCCEEE
T ss_pred cCCCCCEEEEEeeCHHHHHHHHHHHHCCCEE-E-EeChHHHHhhHHHHHHHH-HHcCCEEE
Confidence 4346999999999999999999999999765 3 3444110 1223455555 67777765
No 234
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.01 E-value=0.0063 Score=58.87 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=49.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
..+|.|||. |++|+.+++.+..+|++++ +.||.. +...+...+.+++++.+ +.|++++++|-.
T Consensus 119 gktvGIIGl-G~IG~~vA~~l~a~G~~V~-~~d~~~--~~~~~~~~~~sl~ell~--~aDiV~l~~Plt 181 (381)
T 3oet_A 119 DRTIGIVGV-GNVGSRLQTRLEALGIRTL-LCDPPR--AARGDEGDFRTLDELVQ--EADVLTFHTPLY 181 (381)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECHHH--HHTTCCSCBCCHHHHHH--HCSEEEECCCCC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEE-EECCCh--HHhccCcccCCHHHHHh--hCCEEEEcCcCC
Confidence 456889999 9999999999999999987 778753 22212335778999987 689999999943
No 235
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.00 E-value=0.0076 Score=57.18 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=66.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH--
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI-- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v-- 116 (331)
+..+|.|||. |++|+.+++.+..+|++++ +.||...... ..|.. |.+++++.. +.|++++++|.. ....++
T Consensus 140 ~g~tvgIiG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~~ 214 (334)
T 2pi1_A 140 NRLTLGVIGT-GRIGSRVAMYGLAFGMKVL-CYDVVKREDLKEKGCV-YTSLDELLK--ESDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHTTCE-ECCHHHHHH--HCSEEEECCCCCTTTTTCBCH
T ss_pred cCceEEEECc-CHHHHHHHHHHHHCcCEEE-EECCCcchhhHhcCce-ecCHHHHHh--hCCEEEEeCCCChHHHHhhCH
Confidence 3467899999 9999999999999999987 7887652111 23544 456999987 689999999952 222222
Q ss_pred HHHHHcCCcEE-EEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 LEAMEAELDLV-VCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 ~~~~~~Gi~~i-vi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+.....+-..+ |+.+.|- .-+...|.+.. ++.++.
T Consensus 215 ~~l~~mk~gailIN~aRg~-~vd~~aL~~aL-~~g~i~ 250 (334)
T 2pi1_A 215 ERISLMKDGVYLINTARGK-VVDTDALYRAY-QRGKFS 250 (334)
T ss_dssp HHHHHSCTTEEEEECSCGG-GBCHHHHHHHH-HTTCEE
T ss_pred HHHhhCCCCcEEEECCCCc-ccCHHHHHHHH-HhCCce
Confidence 22223333443 3344442 22344555555 555554
No 236
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.99 E-value=0.0047 Score=59.20 Aligned_cols=87 Identities=15% Similarity=0.079 Sum_probs=62.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC---------ce-----------------ecC--ccccc--C
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG---------TE-----------------HLG--LPVFN--T 90 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g---------~~-----------------i~G--~p~y~--s 90 (331)
.++|+|+|+ |+.|+.++|.+.+. .+++++..+|...- ++ +.| ++++. +
T Consensus 17 ~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 17 QGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred ceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 478999999 99999999998886 78998655553210 01 111 23342 4
Q ss_pred HHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 91 l~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
.++++- +.++|+++.++|.....+.+...++.|+|.+||
T Consensus 96 p~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVI 135 (354)
T 3cps_A 96 PAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVII 135 (354)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEE
T ss_pred hHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEE
Confidence 555541 126899999999999999999999999987665
No 237
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.97 E-value=0.026 Score=51.18 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=58.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCC-CC----Cc-------eecCcccc-------cCHHHhhhcCCCCEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK-KG----GT-------EHLGLPVF-------NTVAEAKAETKANAS 103 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~-~~----g~-------~i~G~p~y-------~sl~dl~~~~~iDla 103 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++.+... .. .+ ...|+.++ .++.++.+ ++|++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~v 80 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIV 80 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEE
Confidence 4588999999999999999999899877544322 00 00 01233222 23555555 79999
Q ss_pred EEecCh---hhHHHHHHHHHHcC-CcEEEEec
Q 020101 104 AIYVPP---PFAAAAILEAMEAE-LDLVVCIT 131 (331)
Q Consensus 104 ii~vp~---~~~~~~v~~~~~~G-i~~ivi~t 131 (331)
|.+.+. .....+++.|.+.| ++.++ ++
T Consensus 81 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v-~S 111 (307)
T 2gas_A 81 ICAAGRLLIEDQVKIIKAIKEAGNVKKFF-PS 111 (307)
T ss_dssp EECSSSSCGGGHHHHHHHHHHHCCCSEEE-CS
T ss_pred EECCcccccccHHHHHHHHHhcCCceEEe-ec
Confidence 988763 55677888888898 99865 44
No 238
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.95 E-value=0.0078 Score=57.30 Aligned_cols=90 Identities=16% Similarity=0.050 Sum_probs=62.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHH---c-CCeEEEEeCC----------CCC---C----------ce--ecC--cccc--c
Q 020101 43 TRVICQGITGKNGTFHTEQAIE---Y-GTKMVGGVTP----------KKG---G----------TE--HLG--LPVF--N 89 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~---~-g~~iv~~VnP----------~~~---g----------~~--i~G--~p~y--~ 89 (331)
+||+|+|+ |+.|+.+++.+.+ . ++++++..+. +++ | +. +.| ++++ .
T Consensus 3 ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~ 81 (339)
T 2x5j_O 3 VRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHER 81 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecC
Confidence 68999999 9999999999887 5 7888854443 000 0 00 122 2333 2
Q ss_pred CHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCC
Q 020101 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEG 133 (331)
Q Consensus 90 sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G 133 (331)
+.++++- +.++|+++.++|.....+.+...+++|+|.+||=.++
T Consensus 82 dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 82 SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 4555541 1268999999999999999999999999986653344
No 239
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.95 E-value=0.0066 Score=57.49 Aligned_cols=105 Identities=18% Similarity=0.183 Sum_probs=64.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee-cCcccccCHHHhhhcCCCCEEEEecChhh-HHHHH-HH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-LGLPVFNTVAEAKAETKANASAIYVPPPF-AAAAI-LE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i-~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~v-~~ 118 (331)
..+|.|||. |++|+.+++.+..+|++++ .+||... +.. .+.....+++++.. ..|++++++|... ...++ ++
T Consensus 146 g~~vgIiG~-G~IG~~~A~~l~~~G~~V~-~~d~~~~-~~~~~~~~~~~~l~ell~--~aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 146 DQVVGVVGT-GHIGQVFMQIMEGFGAKVI-TYDIFRN-PELEKKGYYVDSLDDLYK--QADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCC-HHHHHTTCBCSCHHHHHH--HCSEEEECSCCCGGGTTCBSHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EECCCcc-hhHHhhCeecCCHHHHHh--hCCEEEEcCCCcHHHHHHHhHH
Confidence 456889999 9999999999999999977 7887652 111 12332338989887 6899999999533 22222 11
Q ss_pred H-HHcCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 119 A-MEAELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 119 ~-~~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
. ...+-.. +++.+.|- -.+...|.++. ++.++.
T Consensus 221 ~l~~mk~ga~lIn~arg~-~vd~~aL~~aL-~~g~i~ 255 (333)
T 1j4a_A 221 SIAKMKQDVVIVNVSRGP-LVDTDAVIRGL-DSGKIF 255 (333)
T ss_dssp HHHHSCTTEEEEECSCGG-GBCHHHHHHHH-HHTSEE
T ss_pred HHhhCCCCcEEEECCCCc-ccCHHHHHHHH-HhCCce
Confidence 1 2223233 34444442 22334555555 455544
No 240
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.95 E-value=0.021 Score=51.81 Aligned_cols=89 Identities=22% Similarity=0.079 Sum_probs=58.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEe-CCCCCC-c--eecCcccc-------cCHHHhhhcCCCCEEEEecCh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGV-TPKKGG-T--EHLGLPVF-------NTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~V-nP~~~g-~--~i~G~p~y-------~sl~dl~~~~~iDlaii~vp~ 109 (331)
+.+|+|.|++|.+|+.+++.|.+.| +++++.. +|.... . ...|+.++ .+++++.+ ++|.++.+.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN--GAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh--cCCEEEEeCCC
Confidence 3568899999999999999999888 8887543 332200 0 01133222 23555555 79999988753
Q ss_pred h----------hHHHHHHHHHHcCCcEEEEecC
Q 020101 110 P----------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ~----------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
. ....+++.|.+.|++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 83 WESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 1 3456778888899998776443
No 241
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.94 E-value=0.024 Score=51.47 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=59.2
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC--c---------eecCcccc-------cCHHHhhhcCCCCEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--T---------EHLGLPVF-------NTVAEAKAETKANASA 104 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g--~---------~i~G~p~y-------~sl~dl~~~~~iDlai 104 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++.+...... . ...|+.++ .++.++.+ ++|+++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi 82 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI 82 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence 4588999999999999999999999887544321100 0 01233322 23555555 799999
Q ss_pred EecCh---hhHHHHHHHHHHcC-CcEEEEecC
Q 020101 105 IYVPP---PFAAAAILEAMEAE-LDLVVCITE 132 (331)
Q Consensus 105 i~vp~---~~~~~~v~~~~~~G-i~~ivi~t~ 132 (331)
.+.+. .....+++.|.+.| ++.++ ++.
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v-~S~ 113 (308)
T 1qyc_A 83 STVGSLQIESQVNIIKAIKEVGTVKRFF-PSE 113 (308)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEE-CSC
T ss_pred ECCcchhhhhHHHHHHHHHhcCCCceEe-ecc
Confidence 88765 34567888888898 99865 443
No 242
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.92 E-value=0.0058 Score=56.25 Aligned_cols=91 Identities=12% Similarity=0.074 Sum_probs=59.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-----C-CeEEEEeCCCCCCce--e-cCcccc--------------cCHHHhhhc
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-----G-TKMVGGVTPKKGGTE--H-LGLPVF--------------NTVAEAKAE 97 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-----g-~~iv~~VnP~~~g~~--i-~G~p~y--------------~sl~dl~~~ 97 (331)
+.++|+|+|+ |.||..+...|.+. | ++++ .+++...-+. - .|+.+. .+.++ .+
T Consensus 7 ~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~- 82 (317)
T 2qyt_A 7 QPIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVS-WIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAE-VG- 82 (317)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEE-EECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHH-HC-
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEE-EEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccc-cC-
Confidence 3468999999 99999999998887 8 8776 6665210001 1 344332 23333 33
Q ss_pred CCCCEEEEecChhhHHHHHHHHHHc-CC-cEEEEecCCCCh
Q 020101 98 TKANASAIYVPPPFAAAAILEAMEA-EL-DLVVCITEGIPQ 136 (331)
Q Consensus 98 ~~iDlaii~vp~~~~~~~v~~~~~~-Gi-~~ivi~t~G~~e 136 (331)
+.|++++++|+..+.+++++.... +- +.++.++.|+..
T Consensus 83 -~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 83 -TVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp -CEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred -CCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 689999999999998888776542 11 234556788854
No 243
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.90 E-value=0.016 Score=55.15 Aligned_cols=86 Identities=14% Similarity=0.036 Sum_probs=61.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCCC-------------CCCc----------e--ecC--ccccc--C
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPK-------------KGGT----------E--HLG--LPVFN--T 90 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP~-------------~~g~----------~--i~G--~p~y~--s 90 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..++. ..|+ . +.| ++++. +
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred eEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 68999999 99999999998876 37888544330 0010 1 123 33432 5
Q ss_pred HHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 91 l~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
.++++- +.++|+++.++|.....+.+...+++|++.+|+
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVI 121 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEE
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEE
Confidence 666652 137999999999999999999999999998665
No 244
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=95.90 E-value=0.0069 Score=58.14 Aligned_cols=107 Identities=18% Similarity=0.195 Sum_probs=67.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCe-EEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTK-MVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~-iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~ 115 (331)
+..+|.|||. |++|+.+++.+..+|++ ++ ..|+.....+ ..|+..+.+++++.. +.|++++++|.. ....+
T Consensus 163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~-~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~P~t~~t~~l 238 (364)
T 2j6i_A 163 EGKTIATIGA-GRIGYRVLERLVPFNPKELL-YYDYQALPKDAEEKVGARRVENIEELVA--QADIVTVNAPLHAGTKGL 238 (364)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGCCSEEE-EECSSCCCHHHHHHTTEEECSSHHHHHH--TCSEEEECCCCSTTTTTC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCcEEE-EECCCccchhHHHhcCcEecCCHHHHHh--cCCEEEECCCCChHHHHH
Confidence 4567899999 99999999999999997 77 7776542111 246655668999987 799999999985 22233
Q ss_pred H-HHHH-HcCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 116 I-LEAM-EAELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 116 v-~~~~-~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+ ++.+ ..+-.. +++.+.|- --+...|.+.. ++.++.
T Consensus 239 i~~~~l~~mk~ga~lIn~arG~-~vd~~aL~~aL-~~g~i~ 277 (364)
T 2j6i_A 239 INKELLSKFKKGAWLVNTARGA-ICVAEDVAAAL-ESGQLR 277 (364)
T ss_dssp BCHHHHTTSCTTEEEEECSCGG-GBCHHHHHHHH-HHTSEE
T ss_pred hCHHHHhhCCCCCEEEECCCCc-hhCHHHHHHHH-HcCCCc
Confidence 3 1222 223333 34444442 12334455554 455544
No 245
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.88 E-value=0.043 Score=54.36 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=60.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-cee--c-------------------CcccccCHHHhhhc
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-TEH--L-------------------GLPVFNTVAEAKAE 97 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~~i--~-------------------G~p~y~sl~dl~~~ 97 (331)
..+|+|||+ |.+|......|.+. |++++ ++|.+... +.+ . ++....++++...
T Consensus 9 ~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~- 85 (481)
T 2o3j_A 9 VSKVVCVGA-GYVGGPTCAMIAHKCPHITVT-VVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA- 85 (481)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh-
Confidence 357999999 99999999988887 78877 66654310 000 1 1233345555555
Q ss_pred CCCCEEEEecChh---------------hHHHHHHHHHHc-CCcEEEEecCCCChhHHHHHHHHH
Q 020101 98 TKANASAIYVPPP---------------FAAAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAAL 146 (331)
Q Consensus 98 ~~iDlaii~vp~~---------------~~~~~v~~~~~~-Gi~~ivi~t~G~~e~~~~~l~~~a 146 (331)
+.|++++++|.. .+.++++..... .-..+|+..+..+....+++.+..
T Consensus 86 -~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l 149 (481)
T 2o3j_A 86 -EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCIL 149 (481)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred -cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHH
Confidence 589999998753 256666655542 334555554455443334444444
No 246
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=95.86 E-value=0.019 Score=54.86 Aligned_cols=163 Identities=15% Similarity=0.111 Sum_probs=94.4
Q ss_pred eEEEEEcCCCCCCcHHHHH---HHHc-CCeEEEEeCCCCCCcee-------cCcccccCHHHhhhcCCCCEEEEecCh--
Q 020101 43 TRVICQGITGKNGTFHTEQ---AIEY-GTKMVGGVTPKKGGTEH-------LGLPVFNTVAEAKAETKANASAIYVPP-- 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~---l~~~-g~~iv~~VnP~~~g~~i-------~G~p~y~sl~dl~~~~~iDlaii~vp~-- 109 (331)
.+++|.+- |.+|+...|. +.++ ++++++.+|....|++. .|+|++.|++++.+. ++|++++.+.|
T Consensus 8 ~~~vi~~~-g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~~~gipi~~~l~~al~~-~~d~lvig~a~~g 85 (349)
T 2obn_A 8 QRVAILLH-EGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGIYRYVPIVKSVEAALEY-KPQVLVIGIAPKG 85 (349)
T ss_dssp CCEEEECT-TTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCCCSCCCEESSHHHHGGG-CCSEEEECCCCCC
T ss_pred CcEEEEeC-CCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCCcCCCCccCCHHHHHhC-CCCEEEEEecCCC
Confidence 34555654 6666544443 3544 78999999988776543 359999999999853 79999999822
Q ss_pred ----hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEE
Q 020101 110 ----PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGI 185 (331)
Q Consensus 110 ----~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~val 185 (331)
+...+.+.+|+++|... +..- .....+..++.++| ++ |..+..=.- +|..+....-.......-.+-+
T Consensus 86 G~l~~~~~~~i~~Al~~G~~V-vsgl-h~~l~~~pel~~~A-~~-g~~i~dvr~----pp~~l~~~~g~~~~v~~k~i~v 157 (349)
T 2obn_A 86 GGIPDDYWIELKTALQAGMSL-VNGL-HTPLANIPDLNALL-QP-GQLIWDVRK----EPANLDVASGAARTLPCRRVLT 157 (349)
T ss_dssp C-SCGGGHHHHHHHHHTTCEE-EECS-SSCCTTCHHHHHHC-CT-TCCEEETTC----CCSSCCCCCSGGGGCSSEEEEE
T ss_pred CCCCHHHHHHHHHHHHcCCcE-EeCc-cchhhCCHHHHHHH-Hc-CCEEEEecc----CcccccccccceeeecceEEEE
Confidence 46678899999999986 4222 22222323466666 67 888775331 1212211100000011112444
Q ss_pred EecChH-----HHHHHHHHHHhCCCCceEEEecCCC
Q 020101 186 VSRSGT-----LTYEAVFQTTAVGLGQSTCVGIGGD 216 (331)
Q Consensus 186 isQSG~-----~~~~~~~~~~~~g~g~s~~vs~Gn~ 216 (331)
+.-.-+ .+..+...++++|+-..+ +.+|..
T Consensus 158 ~GTD~~VGK~~ts~~L~~~l~~~G~~a~~-~~tgqt 192 (349)
T 2obn_A 158 VGTDMAIGKMSTSLELHWAAKLRGWRSKF-LATGQT 192 (349)
T ss_dssp EESSSSSSHHHHHHHHHHHHHHTTCCEEE-ECCSHH
T ss_pred cCCCccccceeHHHHHHHHHHhcCCcEEE-Eeccch
Confidence 443322 234456677888875554 556643
No 247
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.86 E-value=0.029 Score=48.12 Aligned_cols=86 Identities=12% Similarity=0.066 Sum_probs=49.8
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-e-cCccccc-CHH----HhhhcCCCCEEEEecCh-------
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-H-LGLPVFN-TVA----EAKAETKANASAIYVPP------- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-i-~G~p~y~-sl~----dl~~~~~iDlaii~vp~------- 109 (331)
+|+|.|++|.+|+.+++.|.+.|+++++. ..+..... . .++..+. ++. +... ++|++|.+...
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAI-VRNAGKITQTHKDINILQKDIFDLTLSDLS--DQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ESCSHHHHHHCSSSEEEECCGGGCCHHHHT--TCSEEEECCCSSTTTTTS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEE-EcCchhhhhccCCCeEEeccccChhhhhhc--CCCEEEECCcCCccccch
Confidence 68899999999999999999999998744 33220000 0 1222221 222 2222 57777766543
Q ss_pred --hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 --PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 --~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.++++++
T Consensus 79 ~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp HHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEec
Confidence 23344555555555655555543
No 248
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.85 E-value=0.006 Score=57.62 Aligned_cols=65 Identities=14% Similarity=0.171 Sum_probs=48.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+..+|+|||+ |++|+.+.+.+...|++++ .+|+.....+ ..|+... +++++.. +.|++++++|..
T Consensus 154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~-~l~e~l~--~aDvVi~~vp~~ 221 (330)
T 2gcg_A 154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRF-LYTGRQPRPEEAAEFQAEFV-STPELAA--QSDFIVVACSLT 221 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCCEE-EEESSSCCHHHHHTTTCEEC-CHHHHHH--HCSEEEECCCCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EECCCCcchhHHHhcCceeC-CHHHHHh--hCCEEEEeCCCC
Confidence 3457899999 9999999999999999976 6676542111 1344433 8888877 689999999975
No 249
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.83 E-value=0.0047 Score=58.74 Aligned_cols=86 Identities=15% Similarity=0.076 Sum_probs=61.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCC-------------CCCc----------e--ecC--ccccc--CHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPK-------------KGGT----------E--HLG--LPVFN--TVA 92 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~-------------~~g~----------~--i~G--~p~y~--sl~ 92 (331)
+||+|+|+ |+.|+.++|.+.+. .+++++..+.. ..|+ . +.| ++++. +.+
T Consensus 2 ikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (334)
T 3cmc_O 2 VKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE 80 (334)
T ss_dssp EEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChh
Confidence 68999999 99999999998876 67888554431 1111 0 122 33442 455
Q ss_pred Hhh-hcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 93 EAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 93 dl~-~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
+++ .+.++|+++.++|.....+.+...+++|+|.+||
T Consensus 81 ~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVI 118 (334)
T 3cmc_O 81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118 (334)
T ss_dssp GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence 554 1236999999999999999999999999987665
No 250
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.83 E-value=0.03 Score=51.34 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=58.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCC-CC---Cc-------eecCcccc-------cCHHHhhhcCCCCEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK-KG---GT-------EHLGLPVF-------NTVAEAKAETKANASA 104 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~-~~---g~-------~i~G~p~y-------~sl~dl~~~~~iDlai 104 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++..... .. .. ...++.++ .++.++.+ ++|+++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi 82 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVI 82 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEE
Confidence 4588999999999999999999999877544322 10 00 01133222 23555555 799999
Q ss_pred EecCh---hhHHHHHHHHHHcC-CcEEE
Q 020101 105 IYVPP---PFAAAAILEAMEAE-LDLVV 128 (331)
Q Consensus 105 i~vp~---~~~~~~v~~~~~~G-i~~iv 128 (331)
.+... .....+++.|.+.| ++.+|
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 88764 45677888898999 99866
No 251
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.82 E-value=0.029 Score=51.08 Aligned_cols=84 Identities=17% Similarity=0.155 Sum_probs=57.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC--ce--------ecCcccc-------cCHHHhhhcCCCCEEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--TE--------HLGLPVF-------NTVAEAKAETKANASAI 105 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g--~~--------i~G~p~y-------~sl~dl~~~~~iDlaii 105 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++.+...... +. ..|+.++ .++.++.+ ++|+++.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~ 82 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVIS 82 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEE
Confidence 4688999999999999999999999887544321100 00 1233222 23555555 7999998
Q ss_pred ecCh-------hhHHHHHHHHHHcC-CcEEE
Q 020101 106 YVPP-------PFAAAAILEAMEAE-LDLVV 128 (331)
Q Consensus 106 ~vp~-------~~~~~~v~~~~~~G-i~~iv 128 (331)
+... .....+++.|.+.| ++.+|
T Consensus 83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 7753 35677888898999 99865
No 252
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.80 E-value=0.014 Score=55.08 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=49.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ceecCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEHLGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
+..+|.|||. |++|+.+++.+..+|++++ +.|+.... ....+...+.+++++.. +.|++++++|.
T Consensus 139 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~dr~~~~~~~~~~~~~~~~l~ell~--~aDvV~l~lPl 204 (324)
T 3hg7_A 139 KGRTLLILGT-GSIGQHIAHTGKHFGMKVL-GVSRSGRERAGFDQVYQLPALNKMLA--QADVIVSVLPA 204 (324)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCCCTTCSEEECGGGHHHHHH--TCSEEEECCCC
T ss_pred ccceEEEEEE-CHHHHHHHHHHHhCCCEEE-EEcCChHHhhhhhcccccCCHHHHHh--hCCEEEEeCCC
Confidence 4567899999 9999999999999999987 67765411 11222234578999988 79999999994
No 253
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.75 E-value=0.0083 Score=56.53 Aligned_cols=93 Identities=14% Similarity=0.062 Sum_probs=60.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee-------------cC--------------cccccCHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-------------LG--------------LPVFNTVAE 93 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i-------------~G--------------~p~y~sl~d 93 (331)
..+|+|||+ |.||..+...+.+.|++++ .+|++... +.. .| +....++++
T Consensus 6 ~~kI~vIGa-G~MG~~iA~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGS-GLVGRSWAMLFASGGFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CceEEEEee-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 457899999 9999999999999999876 67766410 000 12 344567888
Q ss_pred hhhcCCCCEEEEecChhh--HHHHHHHHHHc-CCcEEE-EecCCCChhH
Q 020101 94 AKAETKANASAIYVPPPF--AAAAILEAMEA-ELDLVV-CITEGIPQHD 138 (331)
Q Consensus 94 l~~~~~iDlaii~vp~~~--~~~~v~~~~~~-Gi~~iv-i~t~G~~e~~ 138 (331)
+.+ +.|+++.++|.+. -..++.++.+. .-..++ -.|++++.++
T Consensus 84 av~--~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~ 130 (319)
T 2dpo_A 84 AVE--GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK 130 (319)
T ss_dssp HTT--TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH
T ss_pred HHh--cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHH
Confidence 766 7899999999753 34555554432 223333 2566776543
No 254
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.73 E-value=0.019 Score=53.17 Aligned_cols=91 Identities=15% Similarity=0.057 Sum_probs=58.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC-C-ce-ecCcccccCHHHhhhcCCCCEEEEecCh-------
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-G-TE-HLGLPVFNTVAEAKAETKANASAIYVPP------- 109 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~-g-~~-i~G~p~y~sl~dl~~~~~iDlaii~vp~------- 109 (331)
.+..+|+|.|++|-+|+.+++.|.+.|+++++....... + .. ...+.-..+++++.+ ++|+++-+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~~ 94 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIM--GVSAVLHLGAFMSWAPAD 94 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHT--TCSEEEECCCCCCSSGGG
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHh--CCCEEEECCcccCcchhh
Confidence 345678999999999999999999999998854332210 0 11 112222234566666 79999966432
Q ss_pred ---------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 ---------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ---------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 95 ~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 95 RDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 12456788888899988777665
No 255
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.72 E-value=0.044 Score=47.92 Aligned_cols=89 Identities=12% Similarity=0.062 Sum_probs=57.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEe-CCCCCCc-eecC-------cccccCHHHhhhcCCCCEEEEecChh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGV-TPKKGGT-EHLG-------LPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~V-nP~~~g~-~i~G-------~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
..+|+|.|++|.+|+.+++.|.+.|+ +++... ++..... ...+ +.-..+++++.+ ++|++|.+....
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS--SCSEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhc--CCCEEEECCCcc
Confidence 35688999999999999999999998 877432 3322100 0011 112233445554 799999876432
Q ss_pred ---------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ---------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ---------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.+++.++.+++
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 2445667777888888777776
No 256
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=95.72 E-value=0.013 Score=55.62 Aligned_cols=89 Identities=12% Similarity=-0.058 Sum_probs=63.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC-------------CCCCc----------e--ecC--ccccc--CHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP-------------KKGGT----------E--HLG--LPVFN--TVAE 93 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP-------------~~~g~----------~--i~G--~p~y~--sl~d 93 (331)
+||+|+|+ |+.|+.+++.+.+.++++++.-++ +..|+ . +.| ++++. +.++
T Consensus 1 ikVgInG~-G~IGr~vlr~l~~~~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 79 (331)
T 2g82_O 1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhh
Confidence 47899999 999999999887768888854443 11111 1 122 34442 4555
Q ss_pred hhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 94 AKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 94 l~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
++- +.++|+++.++|.....+.+...++.|.|.+|+-.+
T Consensus 80 l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsap 119 (331)
T 2g82_O 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP 119 (331)
T ss_dssp SCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred CcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCC
Confidence 542 236899999999999999999999999998776434
No 257
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=95.71 E-value=0.0037 Score=59.82 Aligned_cols=66 Identities=12% Similarity=0.130 Sum_probs=52.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+..+|.|||. |++|+.+++.+..+|++++ +.||....+ ...|+..+.+++++.. +.|++++++|..
T Consensus 159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~g~~~~~~l~ell~--~aDiV~l~~Plt 226 (352)
T 3gg9_A 159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVL-VWGRENSKERARADGFAVAESKDALFE--QSDVLSVHLRLN 226 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSHHHHHHHHHTTCEECSSHHHHHH--HCSEEEECCCCS
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEE-EECCCCCHHHHHhcCceEeCCHHHHHh--hCCEEEEeccCc
Confidence 4567899999 9999999999999999987 778764101 1357766679999988 689999999853
No 258
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=95.71 E-value=0.0052 Score=59.46 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=50.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
+..+|.|||. |++|+.+++.+..+|++++ ..||... ..-.|. .+.+++++.. +.|++++++|...
T Consensus 115 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~-~~~~g~-~~~~l~ell~--~aDvV~l~~Plt~ 179 (380)
T 2o4c_A 115 AERTYGVVGA-GQVGGRLVEVLRGLGWKVL-VCDPPRQ-AREPDG-EFVSLERLLA--EADVISLHTPLNR 179 (380)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECHHHH-HHSTTS-CCCCHHHHHH--HCSEEEECCCCCS
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEE-EEcCChh-hhccCc-ccCCHHHHHH--hCCEEEEeccCcc
Confidence 3456899999 9999999999999999987 6787541 111233 4678999987 6899999998644
No 259
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=95.69 E-value=0.15 Score=48.79 Aligned_cols=144 Identities=20% Similarity=0.199 Sum_probs=89.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc-----------------------CCeEEEE--eCCCCCCcee------------
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY-----------------------GTKMVGG--VTPKKGGTEH------------ 82 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~-----------------------g~~iv~~--VnP~~~g~~i------------ 82 (331)
.+.+||+|||+ |+.|+.+++-+..+ +++++++ ||+...|+.+
T Consensus 13 ~~~~rVaIVGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~ 91 (367)
T 1gr0_A 13 STEVRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTI 91 (367)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCC
T ss_pred ccCCCEEEECc-ChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchh
Confidence 46789999999 99999988744322 2345654 7777766531
Q ss_pred ------------------cCcc------------cccCHHHhhhcCCCCEEEEecChhhHHH---HHHHHHHcCCcEEEE
Q 020101 83 ------------------LGLP------------VFNTVAEAKAETKANASAIYVPPPFAAA---AILEAMEAELDLVVC 129 (331)
Q Consensus 83 ------------------~G~p------------~y~sl~dl~~~~~iDlaii~vp~~~~~~---~v~~~~~~Gi~~ivi 129 (331)
.|+. .-.++.+..+++++|++|...|...... .+..|++.|+.- ++
T Consensus 92 ~~~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~~~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~~f-vN 170 (367)
T 1gr0_A 92 KIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAF-VN 170 (367)
T ss_dssp CCSCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHHHTTCSEEEECCCTTCHHHHHHHHHHHHHHTCEE-EE
T ss_pred hhhcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHHHhCCcEEEEeeeCCCcCHHHHHHHHHHHcCCce-Ee
Confidence 0111 1114555555677887777776543322 345677778875 77
Q ss_pred ecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCcccccCCCCCCCCCCEEEEecChHHH--HHHHHHHHhCCCCc
Q 020101 130 ITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLT--YEAVFQTTAVGLGQ 207 (331)
Q Consensus 130 ~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~~~~~~~~~~~G~valisQSG~~~--~~~~~~~~~~g~g~ 207 (331)
+++-+.-.. ..+.+.+ +++|+.++|.+ +=||+|+-- ..+...+..||+.+
T Consensus 171 ~~P~~~~~~-P~~~el~-~~~g~pi~GdD--------------------------~Ksq~G~T~~k~~La~~l~~rg~kv 222 (367)
T 1gr0_A 171 ALPVFIASD-PVWAKKF-TDARVPIVGDD--------------------------IKSQVGATITHRVLAKLFEDRGVQL 222 (367)
T ss_dssp CSSCCSTTS-HHHHHHH-HHHTCEEEESS--------------------------BCCSSCHHHHHHHHHHHHHHTTCEE
T ss_pred cCCccccCC-HHHHHHH-HHcCCCEeccc--------------------------cccccCCChHHHHHHHHHHHcCCce
Confidence 777654321 1234444 57778888855 126777654 34668888999999
Q ss_pred eEEEec
Q 020101 208 STCVGI 213 (331)
Q Consensus 208 s~~vs~ 213 (331)
..+.++
T Consensus 223 ~~~~q~ 228 (367)
T 1gr0_A 223 DRTMQL 228 (367)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 988764
No 260
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.67 E-value=0.019 Score=55.51 Aligned_cols=86 Identities=14% Similarity=0.044 Sum_probs=61.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCC-------------CCCCc----------e--ecC--cccc--cC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTP-------------KKGGT----------E--HLG--LPVF--NT 90 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP-------------~~~g~----------~--i~G--~p~y--~s 90 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..++ ...|+ . +.| ++++ .+
T Consensus 3 ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred cEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 68999999 99999999998875 3788865443 10111 1 123 2333 24
Q ss_pred HHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 91 VAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 91 l~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
.++++- +.++|+++.++|.....+.+...++.|++.+|+
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVI 121 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEE
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEE
Confidence 566651 126999999999999999999999999998664
No 261
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.65 E-value=0.012 Score=56.05 Aligned_cols=91 Identities=13% Similarity=-0.046 Sum_probs=62.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCC-------------CCCC-----------ce--ecCcc--cc--c
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTP-------------KKGG-----------TE--HLGLP--VF--N 89 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP-------------~~~g-----------~~--i~G~p--~y--~ 89 (331)
+||+|+|+ |+.|+.++|.+.+. .+++++..|. +..| +. +.|.+ ++ .
T Consensus 2 ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 2 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 68999999 99999999998876 3567744322 1001 11 22322 33 2
Q ss_pred CHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCCC
Q 020101 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIP 135 (331)
Q Consensus 90 sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~ 135 (331)
+.++++- +.++|+++.++|.....+.+...++.|++.|+ ++..+.
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~-iSap~r 126 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL-ITAPGK 126 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEE-ESSCCB
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEE-ECCccc
Confidence 3444431 12689999999999999999999999999866 565553
No 262
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.64 E-value=0.03 Score=51.53 Aligned_cols=89 Identities=10% Similarity=0.015 Sum_probs=56.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceec--Ccccc-------cCHHHhhhcCCCCEEEEecChh--
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHL--GLPVF-------NTVAEAKAETKANASAIYVPPP-- 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~--G~p~y-------~sl~dl~~~~~iDlaii~vp~~-- 110 (331)
.++|+|.|++|.+|+.+++.|.+.|+++++........+... ++..+ .+++++.+ ++|++|-+....
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~ 90 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYPS 90 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT--TCSEEEEC------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc--CCCEEEECCccCcC
Confidence 357999999999999999999999999874432211101111 22222 23455555 799999765421
Q ss_pred --------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 --------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 --------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.+|.+++
T Consensus 91 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 91 RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 2356778888889887776665
No 263
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.62 E-value=0.017 Score=46.16 Aligned_cols=89 Identities=9% Similarity=0.081 Sum_probs=55.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccc-c---CHHHhhh--cCCCCEEEEecChh--h
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVF-N---TVAEAKA--ETKANASAIYVPPP--F 111 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y-~---sl~dl~~--~~~iDlaii~vp~~--~ 111 (331)
.+|+|+|+ |.+|+.+.+.|.+.|++++ .++++... +. ..|...+ . +.+.+.+ -.++|+++++++.+ .
T Consensus 7 ~~v~I~G~-G~iG~~~a~~l~~~g~~v~-~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 84 (144)
T 2hmt_A 7 KQFAVIGL-GRFGGSIVKELHRMGHEVL-AVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQA 84 (144)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCCE-EEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHH
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHH
Confidence 35789999 9999999999999898865 55543210 00 1122222 1 2222221 12689999999864 3
Q ss_pred HHHHHHHHHHcCCcEEEEecCC
Q 020101 112 AAAAILEAMEAELDLVVCITEG 133 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~~ivi~t~G 133 (331)
...++..+.+.|++.++..+.+
T Consensus 85 ~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 85 STLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp HHHHHHHHHHTTCSEEEEECCS
T ss_pred HHHHHHHHHHcCCCeEEEEeCC
Confidence 4566677778888876655544
No 264
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.53 E-value=0.021 Score=53.96 Aligned_cols=89 Identities=15% Similarity=0.056 Sum_probs=56.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCc--e---ecCcccc-------cCHHHhhhcCCCCEEEEec
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGT--E---HLGLPVF-------NTVAEAKAETKANASAIYV 107 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~--~---i~G~p~y-------~sl~dl~~~~~iDlaii~v 107 (331)
+.++|+|.|++|-+|+.+++.|.+.| +++++. +...... . ..++..+ .+++++.+ ++|++|-+.
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~A 107 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVV-DNLLSAEKINVPDHPAVRFSETSITDDALLASLQD--EYDYVFHLA 107 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEE-CCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS--CCSEEEECC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEE-ECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh--CCCEEEECC
Confidence 34678999999999999999999999 998844 3322111 0 1122222 12344444 799999765
Q ss_pred Chh------------------hHHHHHHHHHHc-CCcEEEEecC
Q 020101 108 PPP------------------FAAAAILEAMEA-ELDLVVCITE 132 (331)
Q Consensus 108 p~~------------------~~~~~v~~~~~~-Gi~~ivi~t~ 132 (331)
... ....+++.|.+. +++.+|.+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp CCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 421 134566777777 8887776655
No 265
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.48 E-value=0.012 Score=54.61 Aligned_cols=90 Identities=9% Similarity=0.066 Sum_probs=60.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee--cCcccc----------cCHHHhhhcCCCCEEEEecCh
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH--LGLPVF----------NTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i--~G~p~y----------~sl~dl~~~~~iDlaii~vp~ 109 (331)
++|+|+|+ |.+|..+...|. .|.++. .+++.... +.+ .|+.+. +.-++... +.|+++++|++
T Consensus 3 mkI~IiGa-Ga~G~~~a~~L~-~g~~V~-~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~--~~D~vilavK~ 77 (307)
T 3ego_A 3 LKIGIIGG-GSVGLLCAYYLS-LYHDVT-VVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINS--DFDLLVVTVKQ 77 (307)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TTSEEE-EECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCS--CCSEEEECCCG
T ss_pred CEEEEECC-CHHHHHHHHHHh-cCCceE-EEECCHHHHHHHHhCCceEecCCCeecccccccccccC--CCCEEEEEeCH
Confidence 57899999 999999998888 888876 66654310 111 233221 10012222 68999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChh
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQH 137 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~ 137 (331)
....++++++...+-+.++.++.|+..+
T Consensus 78 ~~~~~~l~~l~~~~~~~ivs~~nGi~~~ 105 (307)
T 3ego_A 78 HQLQSVFSSLERIGKTNILFLQNGMGHI 105 (307)
T ss_dssp GGHHHHHHHTTSSCCCEEEECCSSSHHH
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCccHH
Confidence 9999998877654434467788899643
No 266
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.48 E-value=0.013 Score=58.81 Aligned_cols=106 Identities=19% Similarity=0.304 Sum_probs=68.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v~ 117 (331)
+..+|.|||. |++|+.+.+.+...|++++ ..||....+ ...|+... +++++.. +.|++++++|.. ....++.
T Consensus 141 ~g~~vgIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~g~~~~-~l~e~~~--~aDvV~l~~P~~~~t~~~i~ 215 (529)
T 1ygy_A 141 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVV-AYDPYVSPARAAQLGIELL-SLDDLLA--RADFISVHLPKTPETAGLID 215 (529)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECTTSCHHHHHHHTCEEC-CHHHHHH--HCSEEEECCCCSTTTTTCBC
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCEEE-EECCCCChhHHHhcCcEEc-CHHHHHh--cCCEEEECCCCchHHHHHhC
Confidence 3457889999 9999999999999999977 778865211 12455544 7888887 689999999987 5555554
Q ss_pred H-HHH-cCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 118 E-AME-AELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 118 ~-~~~-~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+ ... .+-.. ++..+.|-. -+..+|.+.. ++.++.
T Consensus 216 ~~~~~~~k~g~ilin~arg~i-v~~~aL~~al-~~g~i~ 252 (529)
T 1ygy_A 216 KEALAKTKPGVIIVNAARGGL-VDEAALADAI-TGGHVR 252 (529)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHHHHH-HTSSEE
T ss_pred HHHHhCCCCCCEEEECCCCch-hhHHHHHHHH-HcCCcc
Confidence 4 322 22233 333444432 2333455544 454443
No 267
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.47 E-value=0.045 Score=44.99 Aligned_cols=87 Identities=13% Similarity=0.001 Sum_probs=52.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC--ce-----ecCccccc-------CHHHh-hhcCCCCEEEEec
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG--TE-----HLGLPVFN-------TVAEA-KAETKANASAIYV 107 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g--~~-----i~G~p~y~-------sl~dl-~~~~~iDlaii~v 107 (331)
.+|+|+|+ |+.|+.+.+.|.+.|++++ .+++.... +. -.|+.++. .+++. .+ +.|++++++
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~ 79 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQRGQNVT-VISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALS 79 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEE-EEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECS
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEec
Confidence 45788998 9999999999999999877 66654200 01 12333331 23333 22 689999999
Q ss_pred ChhhHHHHH-HHHHHc-CCcEEEEecCC
Q 020101 108 PPPFAAAAI-LEAMEA-ELDLVVCITEG 133 (331)
Q Consensus 108 p~~~~~~~v-~~~~~~-Gi~~ivi~t~G 133 (331)
+.+..-..+ ..+-+. +...++....+
T Consensus 80 ~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 80 DNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 876544433 444444 54454544433
No 268
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.45 E-value=0.018 Score=54.63 Aligned_cols=90 Identities=18% Similarity=0.085 Sum_probs=62.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCc--------ee-----------------cC--ccccc--CHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGT--------EH-----------------LG--LPVFN--TVA 92 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~--------~i-----------------~G--~p~y~--sl~ 92 (331)
+||+|+|+ |+.|+.++|.+.+. .+++++.-+....+. ++ .| ++++. +.+
T Consensus 2 ikVgI~G~-G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (330)
T 1gad_O 2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA 80 (330)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECc-CHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChh
Confidence 68999996 99999999998876 578885544311110 00 11 11233 355
Q ss_pred Hhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecCCC
Q 020101 93 EAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 93 dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~G~ 134 (331)
+++- +.++|+++.++|.....+.+...+++|++.|+ ++..+
T Consensus 81 ~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVd-lSa~~ 122 (330)
T 1gad_O 81 NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVV-MTGPS 122 (330)
T ss_dssp GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEE-ESSCC
T ss_pred hCccccccCCEEEECCCccccHHHHHHHHHCCCEEEE-ECCCC
Confidence 5541 12699999999999999999999999999855 67666
No 269
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.42 E-value=0.0056 Score=57.09 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=59.1
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee------------cCcccccCHHHhhhcCCCCEEEEec
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------------LGLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i------------~G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
..+.+|+|||+ |.||..++.++. .|++++ .+|++. +.. .++....+++++ . +.|++|.++
T Consensus 10 ~~~~~V~vIG~-G~MG~~iA~~la-aG~~V~-v~d~~~--~~~~~~~~~l~~~~~~~i~~~~~~~~~-~--~aDlVieav 81 (293)
T 1zej_A 10 HHHMKVFVIGA-GLMGRGIAIAIA-SKHEVV-LQDVSE--KALEAAREQIPEELLSKIEFTTTLEKV-K--DCDIVMEAV 81 (293)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHH-TTSEEE-EECSCH--HHHHHHHHHSCGGGGGGEEEESSCTTG-G--GCSEEEECC
T ss_pred cCCCeEEEEee-CHHHHHHHHHHH-cCCEEE-EEECCH--HHHHHHHHHHHHHHhCCeEEeCCHHHH-c--CCCEEEEcC
Confidence 34577899999 999999999999 999877 777764 211 145556677773 4 689999999
Q ss_pred ChhhH--HHHHHHHHHcCCcEEEE-ecCCCChhH
Q 020101 108 PPPFA--AAAILEAMEAELDLVVC-ITEGIPQHD 138 (331)
Q Consensus 108 p~~~~--~~~v~~~~~~Gi~~ivi-~t~G~~e~~ 138 (331)
|.+.. ..+..++... -..++. -|+.++.++
T Consensus 82 pe~~~vk~~l~~~l~~~-~~~IlasntSti~~~~ 114 (293)
T 1zej_A 82 FEDLNTKVEVLREVERL-TNAPLCSNTSVISVDD 114 (293)
T ss_dssp CSCHHHHHHHHHHHHTT-CCSCEEECCSSSCHHH
T ss_pred cCCHHHHHHHHHHHhcC-CCCEEEEECCCcCHHH
Confidence 98775 3333444444 333332 244566554
No 270
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.39 E-value=0.061 Score=49.17 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=58.9
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCce-----ecCcccc-------cCHHHhhhcCCCCEEEEecCh-
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTE-----HLGLPVF-------NTVAEAKAETKANASAIYVPP- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~~-----i~G~p~y-------~sl~dl~~~~~iDlaii~vp~- 109 (331)
+|+|.|++|.+|+.+++.|.+.|+++++.+. +....+. -.|+.++ .++.++.+ ++|+++.+.+.
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a~~~ 90 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISALAFP 90 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCGG
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECCchh
Confidence 5889999999999999999999998775433 3210000 1233332 23555555 79999988764
Q ss_pred --hhHHHHHHHHHHcC-CcEEEEecC
Q 020101 110 --PFAAAAILEAMEAE-LDLVVCITE 132 (331)
Q Consensus 110 --~~~~~~v~~~~~~G-i~~ivi~t~ 132 (331)
.....+++.|.+.| ++.++ ++.
T Consensus 91 ~~~~~~~l~~aa~~~g~v~~~v-~S~ 115 (318)
T 2r6j_A 91 QILDQFKILEAIKVAGNIKRFL-PSD 115 (318)
T ss_dssp GSTTHHHHHHHHHHHCCCCEEE-CSC
T ss_pred hhHHHHHHHHHHHhcCCCCEEE-eec
Confidence 44677888888888 99865 443
No 271
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.39 E-value=0.069 Score=50.40 Aligned_cols=91 Identities=8% Similarity=0.011 Sum_probs=58.6
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee--cCccc-------ccCHHHhhhcCCCCEEEEecChh
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH--LGLPV-------FNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i--~G~p~-------y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
.+.++|+|.|++|.+|+.+++.|.+.|+++++........... .++.. ..+++++.+ ++|++|-+....
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~ 104 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAADM 104 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC--CCCEEEECceec
Confidence 3456899999999999999999999999987543322110110 12221 223555555 799999765311
Q ss_pred -------------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 -------------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 -------------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.+++.+|.+++
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 1345677788889988776665
No 272
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=95.38 E-value=0.0095 Score=56.39 Aligned_cols=106 Identities=21% Similarity=0.181 Sum_probs=66.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---ecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---HLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v 116 (331)
...+|.|||. |++|+.+++.+..+|++++ ..||.....+ ..|.. +.+++++.. ..|++++++|.. ....++
T Consensus 144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li 218 (330)
T 4e5n_A 144 DNATVGFLGM-GAIGLAMADRLQGWGATLQ-YHEAKALDTQTEQRLGLR-QVACSELFA--SSDFILLALPLNADTLHLV 218 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHTTTSCCEEE-EECSSCCCHHHHHHHTEE-ECCHHHHHH--HCSEEEECCCCSTTTTTCB
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCCCCcHhHHHhcCce-eCCHHHHHh--hCCEEEEcCCCCHHHHHHh
Confidence 4567899999 9999999999999999977 7787641111 23553 458999987 689999999943 333333
Q ss_pred -HHHHH-cCCcEE-EEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 -LEAME-AELDLV-VCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 -~~~~~-~Gi~~i-vi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
++.++ .+-..+ |+.+.|- --+...|.+.. ++.++.
T Consensus 219 ~~~~l~~mk~gailIN~arg~-~vd~~aL~~aL-~~g~i~ 256 (330)
T 4e5n_A 219 NAELLALVRPGALLVNPCRGS-VVDEAAVLAAL-ERGQLG 256 (330)
T ss_dssp CHHHHTTSCTTEEEEECSCGG-GBCHHHHHHHH-HHTSEE
T ss_pred CHHHHhhCCCCcEEEECCCCc-hhCHHHHHHHH-HhCCcc
Confidence 22222 233333 3344442 22334455554 455544
No 273
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=95.38 E-value=0.024 Score=51.77 Aligned_cols=92 Identities=10% Similarity=0.096 Sum_probs=55.5
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCccc-------ccCHHHhhhcCCCCEEEEecChh-
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPV-------FNTVAEAKAETKANASAIYVPPP- 110 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~-------y~sl~dl~~~~~iDlaii~vp~~- 110 (331)
.+++.+|+|.|++|-+|+.+++.|.+.|+++++...... .+. .++.. ..+++++.+..++|++|-+....
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~-l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE-AKL-PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTT-CCC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc-ccc-ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence 467888999999999999999999999999875433221 111 12221 22344554422489999765321
Q ss_pred -----------------hHHHHHHHHHHc-CCcEEEEecC
Q 020101 111 -----------------FAAAAILEAMEA-ELDLVVCITE 132 (331)
Q Consensus 111 -----------------~~~~~v~~~~~~-Gi~~ivi~t~ 132 (331)
....+++.|.+. +++.+|.+++
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 126 (321)
T 2pk3_A 87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126 (321)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred hhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 134566666554 5777776665
No 274
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.37 E-value=0.0064 Score=56.08 Aligned_cols=93 Identities=14% Similarity=-0.007 Sum_probs=60.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee---cCc---ccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH---LGL---PVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i---~G~---p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
.+|+|+|+ |.+|......|.+.|.++. .+++...+-+. .|. ++..+..+... .+.|+++++||+....+++
T Consensus 3 mkI~iiGa-Ga~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~D~vilavk~~~~~~~l 79 (294)
T 3g17_A 3 LSVAIIGP-GAVGTTIAYELQQSLPHTT-LIGRHAKTITYYTVPHAPAQDIVVKGYEDVT-NTFDVIIIAVKTHQLDAVI 79 (294)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHCTTCE-EEESSCEEEEEESSTTSCCEEEEEEEGGGCC-SCEEEEEECSCGGGHHHHG
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEE-EEEeccCcEEEEecCCeeccceecCchHhcC-CCCCEEEEeCCccCHHHHH
Confidence 46889999 9999999999988887755 55554311111 231 12222223221 2689999999999999988
Q ss_pred HHHHHc-CC-cEEEEecCCCChhH
Q 020101 117 LEAMEA-EL-DLVVCITEGIPQHD 138 (331)
Q Consensus 117 ~~~~~~-Gi-~~ivi~t~G~~e~~ 138 (331)
+++... +- ..++.++.|+..++
T Consensus 80 ~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 80 PHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp GGHHHHEEEEEEEEECCSSCCCGG
T ss_pred HHHHHhhCCCCEEEEeccCcccHh
Confidence 887653 21 34566788986544
No 275
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.36 E-value=0.025 Score=52.28 Aligned_cols=93 Identities=8% Similarity=0.042 Sum_probs=57.7
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcC--CeEEEEeCCCC-CC--cee------cCcccc-------cCHHHhhhcCCC
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKK-GG--TEH------LGLPVF-------NTVAEAKAETKA 100 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g--~~iv~~VnP~~-~g--~~i------~G~p~y-------~sl~dl~~~~~i 100 (331)
..+.++|+|.|++|-+|+.+++.|.+.| ++++ .++... .. ..+ .++..+ .+++++.+..++
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 99 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKII-NFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV 99 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEE-EEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEE-EEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence 4566789999999999999999999888 6666 443221 00 000 122222 235555553348
Q ss_pred CEEEEecChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 101 NASAIYVPPP------------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 101 Dlaii~vp~~------------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
|++|-+.... ....+++.|.+.|++.+|.+++
T Consensus 100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 9999665321 1356788888899998776664
No 276
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.32 E-value=0.021 Score=54.87 Aligned_cols=106 Identities=11% Similarity=0.097 Sum_probs=67.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--eecCcccccCHHHhhhcCCCCEEEEecChh-hHHHHH-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EHLGLPVFNTVAEAKAETKANASAIYVPPP-FAAAAI- 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i~G~p~y~sl~dl~~~~~iDlaii~vp~~-~~~~~v- 116 (331)
...+|.|||. |++|+.+++.++.+|++++ ..||....+ ...|+. +.+++++.. ..|++++++|.. ....++
T Consensus 175 ~gktvGIIGl-G~IG~~vA~~l~~fG~~V~-~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~Plt~~T~~li~ 249 (365)
T 4hy3_A 175 AGSEIGIVGF-GDLGKALRRVLSGFRARIR-VFDPWLPRSMLEENGVE-PASLEDVLT--KSDFIFVVAAVTSENKRFLG 249 (365)
T ss_dssp SSSEEEEECC-SHHHHHHHHHHTTSCCEEE-EECSSSCHHHHHHTTCE-ECCHHHHHH--SCSEEEECSCSSCC---CCC
T ss_pred CCCEEEEecC-CcccHHHHHhhhhCCCEEE-EECCCCCHHHHhhcCee-eCCHHHHHh--cCCEEEEcCcCCHHHHhhcC
Confidence 4567899999 9999999999999999987 778764211 124554 568999998 799999999964 233333
Q ss_pred HHHH-HcCCcE-EEEecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 LEAM-EAELDL-VVCITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 ~~~~-~~Gi~~-ivi~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
++.+ ..+-.. +|+.+.|- --+...|.++. ++..+.
T Consensus 250 ~~~l~~mk~gailIN~aRG~-~vde~aL~~aL-~~g~i~ 286 (365)
T 4hy3_A 250 AEAFSSMRRGAAFILLSRAD-VVDFDALMAAV-SSGHIV 286 (365)
T ss_dssp HHHHHTSCTTCEEEECSCGG-GSCHHHHHHHH-HTTSSE
T ss_pred HHHHhcCCCCcEEEECcCCc-hhCHHHHHHHH-HcCCce
Confidence 2222 233333 34455452 23344555555 566665
No 277
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.32 E-value=0.015 Score=49.36 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=53.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-ce--ecCcccc-c---C---HHHhhhcCCCCEEEEecChh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE--HLGLPVF-N---T---VAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~~--i~G~p~y-~---s---l~dl~~~~~iDlaii~vp~~ 110 (331)
..+|+|+|+ |++|+.+++.|.+. |++++ .++.+... +. ..|..++ - + +.++..-.+.|++++++|..
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~-vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISL-GIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEE-EEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEE-EEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 345889998 99999999999998 99877 66655310 00 1354433 1 2 23320012689999999865
Q ss_pred hH-HHHHHHHHHcC-CcEEEEec
Q 020101 111 FA-AAAILEAMEAE-LDLVVCIT 131 (331)
Q Consensus 111 ~~-~~~v~~~~~~G-i~~ivi~t 131 (331)
.. ..++..+.+.+ ...++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEE
Confidence 44 44455555656 44444433
No 278
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.31 E-value=0.043 Score=51.69 Aligned_cols=192 Identities=10% Similarity=-0.003 Sum_probs=101.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCC-cee---cCccc-----c---cCHHHhhhcCCCCEEEEecC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGG-TEH---LGLPV-----F---NTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g-~~i---~G~p~-----y---~sl~dl~~~~~iDlaii~vp 108 (331)
..+|+|.|++|.+|+.+++.|.+.|+++++.+. +.... +.. .++.. + .++.++.+ ++|+++.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEcCC
Confidence 346889999999999999999988999875443 32100 000 12211 1 23455555 7899997664
Q ss_pred h------hhHHHHHHHHHHcC-CcEEEEecCCC-Ch---------hHH-HHHHHHHhccCCcE--EEccCCCCcccCC--
Q 020101 109 P------PFAAAAILEAMEAE-LDLVVCITEGI-PQ---------HDM-VRVKAALNNQSKTR--LVGPNCPGVIKPG-- 166 (331)
Q Consensus 109 ~------~~~~~~v~~~~~~G-i~~ivi~t~G~-~e---------~~~-~~l~~~a~~~~gi~--viGPnc~Gi~~p~-- 166 (331)
. .....+++.|.+.| ++.+|.+++.. .+ ... ....+.+ ++.+++ ++=|+ ++.+.
T Consensus 83 ~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~-~~~gi~~~ivrpg---~~g~~~~ 158 (352)
T 1xgk_A 83 SQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYV-RQLGLPSTFVYAG---IYNNNFT 158 (352)
T ss_dssp STTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHH-HTSSSCEEEEEEC---EEGGGCB
T ss_pred CCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHH-HHcCCCEEEEecc---eecCCch
Confidence 3 23466778888889 98878777642 11 011 1223333 455643 33333 22222
Q ss_pred Cc-------c---cccC--CCCCCCCCCEEEEecChHHHHHHHHHHHhCC---CCceEEEecCCCCCCCCCHHHHHHHhh
Q 020101 167 EC-------K---IGIM--PGYIHKPGRIGIVSRSGTLTYEAVFQTTAVG---LGQSTCVGIGGDPFNGTNFVDCVTKFI 231 (331)
Q Consensus 167 ~~-------~---~~~~--~~~~~~~G~valisQSG~~~~~~~~~~~~~g---~g~s~~vs~Gn~~~~~v~~~d~l~~l~ 231 (331)
.. . .+.. +......+.+.+++--..++..+...+.+.. .|-.+.++ ++ .+++.|+++.+.
T Consensus 159 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~--~~---~~s~~e~~~~i~ 233 (352)
T 1xgk_A 159 SLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT--FE---TLSPVQVCAAFS 233 (352)
T ss_dssp SSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC--SE---EECHHHHHHHHH
T ss_pred hcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe--cC---CCCHHHHHHHHH
Confidence 00 0 0000 0000123455665422456666655554321 23334444 34 478899988887
Q ss_pred cCCCccEEEEEEc
Q 020101 232 ADPQTEGIILIGE 244 (331)
Q Consensus 232 ~Dp~T~~I~ly~E 244 (331)
+--..+.-...+.
T Consensus 234 ~~~G~~~~~~~vp 246 (352)
T 1xgk_A 234 RALNRRVTYVQVP 246 (352)
T ss_dssp HHHTSCEEEEECS
T ss_pred HHHCCCCceEECC
Confidence 7555555444444
No 279
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.30 E-value=0.04 Score=51.21 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=59.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-e--------ecCcccc-------cCHHHhhhcCCCCEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-E--------HLGLPVF-------NTVAEAKAETKANASAIY 106 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~--------i~G~p~y-------~sl~dl~~~~~iDlaii~ 106 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++.+....... . -.++.++ .++.++.++.++|++|.+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 46889999999999999999999998875544321000 0 0122222 235555554579999988
Q ss_pred cCh---hhHHHHHHHHHHcC-CcEEE
Q 020101 107 VPP---PFAAAAILEAMEAE-LDLVV 128 (331)
Q Consensus 107 vp~---~~~~~~v~~~~~~G-i~~iv 128 (331)
... .....+++.|.+.| ++.++
T Consensus 91 a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 91 VGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred CchhhHHHHHHHHHHHHHcCCceEEe
Confidence 765 45678888999999 99865
No 280
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.24 E-value=0.022 Score=54.03 Aligned_cols=86 Identities=14% Similarity=0.054 Sum_probs=60.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCCC-------------CCCc----------e--ecC--ccccc--C
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPK-------------KGGT----------E--HLG--LPVFN--T 90 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP~-------------~~g~----------~--i~G--~p~y~--s 90 (331)
+||+|+|+ |+.|+.++|.+.+. .+++++.-+.. ..|+ . +.| ++++. +
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 47899999 99999999988765 47888554321 0111 0 122 33442 4
Q ss_pred HHHhh-hcCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 91 VAEAK-AETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 91 l~dl~-~~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
.++++ .+.++|+++.++|.....+.+...+++|+|.+||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVI 119 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEE
Confidence 55553 1126899999999999999999999999987664
No 281
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.23 E-value=0.0094 Score=54.61 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCcccccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
+..+|+|+|+ |.+|+.+++.|.+.|++++ .+|++... ++ ..|+.++++++++.+ +.|++|.+||+....
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~-v~~r~~~~~~~l~~~~g~~~~~~~~~~~~--~aDiVi~atp~~~~~ 200 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKVF-LWNRTKEKAIKLAQKFPLEVVNSPEEVID--KVQVIVNTTSVGLKD 200 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSSHHHHHHHTTTSCEEECSCGGGTGG--GCSEEEECSSTTSST
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEEE-EEECCHHHHHHHHHHcCCeeehhHHhhhc--CCCEEEEeCCCCCCC
Confidence 4567899998 9999999999998888654 88876411 11 235666667777766 689999999988643
No 282
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.19 E-value=0.019 Score=51.53 Aligned_cols=86 Identities=19% Similarity=0.256 Sum_probs=57.0
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc--CCeEEEEe-CCCCCCcee--cCcccc-------cCHHHhhhcCCCCEEEEecCh--
Q 020101 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGV-TPKKGGTEH--LGLPVF-------NTVAEAKAETKANASAIYVPP-- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~--g~~iv~~V-nP~~~g~~i--~G~p~y-------~sl~dl~~~~~iDlaii~vp~-- 109 (331)
+|+|.|++|.+|+.+++.|.+. |+++++.. +|... +.. .++.++ .+++++.+ ++|+++.+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~ 77 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-QALAAQGITVRQADYGDEAALTSALQ--GVEKLLLISSSEV 77 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-HHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECC----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-hhhhcCCCeEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCc
Confidence 3788999999999999999887 88877443 23221 110 122222 23555555 78999977643
Q ss_pred ----hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 ----PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ----~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.++.+++
T Consensus 78 ~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 78 GQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ----CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 34667788888899988777665
No 283
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.18 E-value=0.027 Score=52.83 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=59.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee--cC-------------cccccCHHHhhhcCCCCEEEEec
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH--LG-------------LPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i--~G-------------~p~y~sl~dl~~~~~iDlaii~v 107 (331)
.+|+|||+ |.+|..+...|.+.|+++. .+++...-+.+ .| +++..+.+++ . +.|++++++
T Consensus 4 mkI~IiGa-G~~G~~~a~~L~~~g~~V~-~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~--~~D~Vilav 78 (335)
T 3ghy_A 4 TRICIVGA-GAVGGYLGARLALAGEAIN-VLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAAL-G--EQDVVIVAV 78 (335)
T ss_dssp CCEEEESC-CHHHHHHHHHHHHTTCCEE-EECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHHH-C--CCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCEEE-EEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-C--CCCEEEEeC
Confidence 57899999 9999999999998898866 66652100100 12 2334567775 3 689999999
Q ss_pred ChhhHHHHHHHHHHc-C-CcEEEEecCCC
Q 020101 108 PPPFAAAAILEAMEA-E-LDLVVCITEGI 134 (331)
Q Consensus 108 p~~~~~~~v~~~~~~-G-i~~ivi~t~G~ 134 (331)
|+....+++++.... + -..++.++.|+
T Consensus 79 k~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 79 KAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 998888877765432 1 23456678896
No 284
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=95.17 E-value=0.042 Score=50.16 Aligned_cols=86 Identities=15% Similarity=0.163 Sum_probs=57.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh-----------
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP----------- 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~----------- 110 (331)
.++|+|.|++|-+|+.+++.|.+.|++++. +..... ..+.-..+++++.++.++|++|-+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~-~~r~~~----~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~ 77 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELV-LRTRDE----LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPA 77 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEE-CCCTTT----CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEE-EecCcc----CCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHH
Confidence 367899999999999999999999998774 443221 1122223455555433689999765321
Q ss_pred --------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 --------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 --------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.+++.+|.+++
T Consensus 78 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 78 DFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 2345677888889988776665
No 285
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=95.15 E-value=0.017 Score=54.38 Aligned_cols=58 Identities=28% Similarity=0.363 Sum_probs=27.0
Q ss_pred cccccccCCCCCCCCCCCCcccccCCCC-eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe
Q 020101 15 MSSEICCGQSRSFTTAPPPAPAVFVDKN-TRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (331)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~l~~ll~~k~-~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V 73 (331)
|++|---..+++-.++++..+..- ++. .+|+|.|++|-+|+.+++.|.+.|+++++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~ 59 (381)
T 1n7h_A 1 MASENNGSRSDSESITAPKADSTV-VEPRKIALITGITGQDGSYLTEFLLGKGYEVHGLI 59 (381)
T ss_dssp ----------------------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccCCCCcccccccccCCCCchh-hhhCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Confidence 444433334445444444444433 222 4789999999999999999999999987543
No 286
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.00 E-value=0.062 Score=49.43 Aligned_cols=92 Identities=10% Similarity=0.037 Sum_probs=58.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCcee--------cCccc-------ccCHHHhhhcCCCCEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEH--------LGLPV-------FNTVAEAKAETKANASA 104 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~~i--------~G~p~-------y~sl~dl~~~~~iDlai 104 (331)
+..+|+|.|++|-+|+.+++.|.+.|++++.... +....+.. .++.. ..+++++.++.++|++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 3457889999999999999999999999874322 22110000 01111 22355555444699998
Q ss_pred EecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 105 IYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 105 i~vp~------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
-+... .....+++.|.+.+++.+|.+++
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 76531 12445677888889988777765
No 287
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.91 E-value=0.11 Score=44.23 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=57.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCCCceecCcccc-cCHHHh---hhcCCCCEEEEecChh-----
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEHLGLPVF-NTVAEA---KAETKANASAIYVPPP----- 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~g~~i~G~p~y-~sl~dl---~~~~~iDlaii~vp~~----- 110 (331)
..+|+|.|++|.+|+.+++.|.+.|. +++ .++.+.. +...++..+ -++.+. .+.. +|++|.+....
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~-~~~r~~~-~~~~~~~~~~~D~~~~~~~~~~~-~d~vi~~a~~~~~~~~ 81 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVI-APARKAL-AEHPRLDNPVGPLAELLPQLDGS-IDTAFCCLGTTIKEAG 81 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEE-CCBSSCC-CCCTTEECCBSCHHHHGGGCCSC-CSEEEECCCCCHHHHS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEE-EEeCCCc-ccCCCceEEeccccCHHHHHHhh-hcEEEECeeeccccCC
Confidence 35789999999999999999999887 777 4443321 112233222 244442 2222 89999876431
Q ss_pred -----------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 -----------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 -----------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 114 (215)
T 2a35_A 82 SEEAFRAVDFDLPLAVGKRALEMGARHYLVVSA 114 (215)
T ss_dssp SHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECC
Confidence 3455777888889988777666
No 288
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.84 E-value=0.016 Score=55.15 Aligned_cols=87 Identities=14% Similarity=0.183 Sum_probs=58.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCce----ecCccccc--------------------CHHHhhhc
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTE----HLGLPVFN--------------------TVAEAKAE 97 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~----i~G~p~y~--------------------sl~dl~~~ 97 (331)
+||+|+|+ |++|+.+++.+.+. ++++++..+....... ..|..+|. +.++++.
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~- 80 (343)
T 2yyy_A 3 AKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE- 80 (343)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG-
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc-
Confidence 68999999 99999999998876 6888865443210000 11222222 2333333
Q ss_pred CCCCEEEEecChhhHHHHHH-HHHHcCCcEEEEecCCC
Q 020101 98 TKANASAIYVPPPFAAAAIL-EAMEAELDLVVCITEGI 134 (331)
Q Consensus 98 ~~iDlaii~vp~~~~~~~v~-~~~~~Gi~~ivi~t~G~ 134 (331)
++|+++.++|.....+..+ .++++|.+ ++ .+.+.
T Consensus 81 -~vDiV~eatg~~~s~~~a~~~~l~aG~~-VI-~sap~ 115 (343)
T 2yyy_A 81 -DADIVVDGAPKKIGKQNLENIYKPHKVK-AI-LQGGE 115 (343)
T ss_dssp -GCSEEEECCCTTHHHHHHHHTTTTTTCE-EE-ECTTS
T ss_pred -CCCEEEECCCccccHHHHHHHHHHCCCE-EE-ECCCc
Confidence 7999999999999888886 89999966 34 45544
No 289
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.82 E-value=0.057 Score=46.51 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=26.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEE
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGG 72 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~ 72 (331)
+|+|.|++|.+|+.+++.|.+.|+++++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~ 30 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAV 30 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEE
Confidence 68899999999999999999999998744
No 290
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.77 E-value=0.069 Score=50.02 Aligned_cols=96 Identities=10% Similarity=0.129 Sum_probs=61.3
Q ss_pred CcccccCCCCeEEEEEcCCCCCCcHHHHHHHHc-CC-eEEEEeCCCCCCc----------e----ecCcccccCHHHhhh
Q 020101 33 PAPAVFVDKNTRVICQGITGKNGTFHTEQAIEY-GT-KMVGGVTPKKGGT----------E----HLGLPVFNTVAEAKA 96 (331)
Q Consensus 33 ~l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~-g~-~iv~~VnP~~~g~----------~----i~G~p~y~sl~dl~~ 96 (331)
.+...|. ..+|+|.|++|.+|+.+++.|.+. |+ +++ .++...... . ...+.-..+++++.+
T Consensus 14 ~~~~~~~--~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~-~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 14 NHQNMLD--NQTILITGGTGSFGKCFVRKVLDTTNAKKII-VYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp --CCTTT--TCEEEEETTTSHHHHHHHHHHHHHCCCSEEE-EEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT
T ss_pred cHHHhhC--CCEEEEECCCcHHHHHHHHHHHhhCCCCEEE-EEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh
Confidence 3556663 456889999999999999999988 97 776 443321000 0 012222234555555
Q ss_pred cCCCCEEEEecChhh------------------HHHHHHHHHHcCCcEEEEecCC
Q 020101 97 ETKANASAIYVPPPF------------------AAAAILEAMEAELDLVVCITEG 133 (331)
Q Consensus 97 ~~~iDlaii~vp~~~------------------~~~~v~~~~~~Gi~~ivi~t~G 133 (331)
++|++|-+..... ...+++.|.+.|++.+|.+++.
T Consensus 91 --~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~ 143 (344)
T 2gn4_A 91 --GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTD 143 (344)
T ss_dssp --TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred --cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence 7999997763211 2467788888999988877763
No 291
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.76 E-value=0.054 Score=49.99 Aligned_cols=91 Identities=14% Similarity=0.090 Sum_probs=57.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCC---ceecCcccc-------cCHHHhhhcCCCCEEEEecCh-
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGG---TEHLGLPVF-------NTVAEAKAETKANASAIYVPP- 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g---~~i~G~p~y-------~sl~dl~~~~~iDlaii~vp~- 109 (331)
.++|+|.|++|-+|+.+++.|.+.|+++++... +.... +.+.++..+ .+++++.++.++|++|-+...
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 357889999999999999999999999875443 22110 011122222 124444432268999876532
Q ss_pred --------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 --------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 --------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 100 ~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 100 KDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp SCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 12456777888888887776664
No 292
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=94.65 E-value=0.1 Score=47.71 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=56.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ceec-Cccc-------ccCHHHhhhcCCCCEEEEecCh----
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEHL-GLPV-------FNTVAEAKAETKANASAIYVPP---- 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i~-G~p~-------y~sl~dl~~~~~iDlaii~vp~---- 109 (331)
++|+|.|++|-+|+.+++.|.+.|+++++........ +.+. ++.. ..+++++.++.++|++|-+...
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~ 81 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVG 81 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCcc
Confidence 4688999999999999999999999987543321100 1111 2221 1234444443368999876532
Q ss_pred --------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 --------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 --------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 82 VSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 12345667777889988776665
No 293
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=94.65 E-value=0.14 Score=44.45 Aligned_cols=88 Identities=16% Similarity=0.096 Sum_probs=56.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC--------cee-cCcccccCHHHhhhcCCCCEEEEecCh-
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG--------TEH-LGLPVFNTVAEAKAETKANASAIYVPP- 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g--------~~i-~G~p~y~sl~dl~~~~~iDlaii~vp~- 109 (331)
..+|+|.|++|.+|+.+++.|.+. |++++.. +.+... ..+ ..+.-..+++++.+ ++|++|.+...
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~ 80 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL-VRSAQGKEKIGGEADVFIGDITDADSINPAFQ--GIDALVILTSAV 80 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEE-ESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT--TCSEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEE-EcCCCchhhcCCCeeEEEecCCCHHHHHHHHc--CCCEEEEecccc
Confidence 456889999999999999999988 7887743 332100 000 11222234556555 68999876531
Q ss_pred ------------------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 ------------------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ------------------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.+++.+|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 12466777888888888776665
No 294
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.65 E-value=0.077 Score=52.66 Aligned_cols=88 Identities=15% Similarity=0.075 Sum_probs=54.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh-----------
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP----------- 110 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~----------- 110 (331)
.++|+|.|++|.+|+.+++.|.+.|+++++.+......+.+.+-. -..+.+..+ ++|++|-+....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~-~~~~~~~l~--~~D~Vih~A~~~~~~~~~~~~~~ 223 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDP-LNPASDLLD--GADVLVHLAGEPIFGRFNDSHKE 223 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCT-TSCCTTTTT--TCSEEEECCCC-----CCGGGHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecc-cchhHHhcC--CCCEEEECCCCccccccchhHHH
Confidence 678999999999999999999999999885543222111221111 122334444 789999764321
Q ss_pred --------hHHHHHHH-HHHcCCcEEEEecC
Q 020101 111 --------FAAAAILE-AMEAELDLVVCITE 132 (331)
Q Consensus 111 --------~~~~~v~~-~~~~Gi~~ivi~t~ 132 (331)
....+++. +.+.+++.+|.+++
T Consensus 224 ~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 224 AIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp HHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 13445565 44567888776654
No 295
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=94.64 E-value=0.028 Score=53.18 Aligned_cols=87 Identities=17% Similarity=0.070 Sum_probs=57.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCe---EEEEeCCCCCCcee--cC--ccccc-CHHHhhhcCCCCEEEEecChhhHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTK---MVGGVTPKKGGTEH--LG--LPVFN-TVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~---iv~~VnP~~~g~~i--~G--~p~y~-sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+||+|+||+|..|+.+++.+.+.++. ++..-..+..|+.+ .| ++++. +.+++ ++|+++.++|.....+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~~~~~----~~DvV~~a~g~~~s~~ 76 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEGPL----PVDLVLASAGGGISRA 76 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECCSSCC----CCSEEEECSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCChhhc----CCCEEEECCCccchHH
Confidence 36899999999999999988855443 33222322222221 22 22222 11111 5899999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCC
Q 020101 115 AILEAMEAELDLVVCITEGI 134 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t~G~ 134 (331)
.+..+.+.|++. |..++-|
T Consensus 77 ~a~~~~~~G~~v-Id~s~~~ 95 (331)
T 2yv3_A 77 KALVWAEGGALV-VDNSSAW 95 (331)
T ss_dssp HHHHHHHTTCEE-EECSSSS
T ss_pred HHHHHHHCCCEE-EECCCcc
Confidence 999999999975 4456554
No 296
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=94.53 E-value=0.044 Score=48.93 Aligned_cols=32 Identities=13% Similarity=0.115 Sum_probs=26.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
.+|+|.|++|.+|+.+++.|.+.|++++ .++.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~r 34 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVR-LSDI 34 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEE-ECCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEE-EEeC
Confidence 4688999999999999999998898877 4443
No 297
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=94.52 E-value=0.03 Score=52.24 Aligned_cols=80 Identities=19% Similarity=0.109 Sum_probs=55.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCC-ce---ecC--cccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGG-TE---HLG--LPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g-~~---i~G--~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
++..+|+|||+ |.+|+.+++.+.+. |++.+...|+.... +. ..+ +..+.+++++.+ +.|+++.+||..
T Consensus 133 ~~~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~--~aDiVi~atp~~-- 207 (312)
T 2i99_A 133 PSSEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVA--GADVIITVTLAT-- 207 (312)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHT--TCSEEEECCCCS--
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHh--cCCEEEEEeCCC--
Confidence 45678999999 99999999988775 87544477876421 11 124 667789999887 789999999952
Q ss_pred HHHHH-HHHHcCC
Q 020101 113 AAAIL-EAMEAEL 124 (331)
Q Consensus 113 ~~~v~-~~~~~Gi 124 (331)
.++++ +.++.|.
T Consensus 208 ~~v~~~~~l~~g~ 220 (312)
T 2i99_A 208 EPILFGEWVKPGA 220 (312)
T ss_dssp SCCBCGGGSCTTC
T ss_pred CcccCHHHcCCCc
Confidence 33333 3444454
No 298
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.51 E-value=0.024 Score=50.94 Aligned_cols=83 Identities=16% Similarity=0.122 Sum_probs=55.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh------------
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~------------ 110 (331)
++|+|.|++|.+|+.+++.|.+.|++++ .++... .+ +.-..+++++.++.++|++|-+....
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~--~D---~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~ 79 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIY-PFDKKL--LD---ITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLA 79 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEE-EECTTT--SC---TTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEE-Eecccc--cC---CCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHH
Confidence 3789999999999999999998899887 444322 11 22233455665533589999764221
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++ ++.+++
T Consensus 80 ~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 80 YVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp HHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 134578888888997 455554
No 299
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.51 E-value=0.12 Score=51.27 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=32.2
Q ss_pred cccccC--CCCeEEEEEcCCCCCCcHHHHHHHHc-CC-eEEEEeCCCC
Q 020101 34 APAVFV--DKNTRVICQGITGKNGTFHTEQAIEY-GT-KMVGGVTPKK 77 (331)
Q Consensus 34 l~~ll~--~k~~~VaIvGasgk~G~~~~~~l~~~-g~-~iv~~VnP~~ 77 (331)
|+.++. .+..+|+|||+ |.||..+...|.+. |+ +++ .+|.+.
T Consensus 8 ~~~~~~~~~~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~-~~D~~~ 53 (478)
T 3g79_A 8 LEKLLKERGPIKKIGVLGM-GYVGIPAAVLFADAPCFEKVL-GFQRNS 53 (478)
T ss_dssp HHHHHHHHCSCCEEEEECC-STTHHHHHHHHHHSTTCCEEE-EECCCC
T ss_pred HHHHHhhcCCCCEEEEECc-CHHHHHHHHHHHHhCCCCeEE-EEECCh
Confidence 555552 23568999999 99999999999999 99 877 555443
No 300
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.42 E-value=0.028 Score=45.78 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=48.9
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-----ecCccccc-C------HHHhhhcCCCCEEEEecChhh
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFN-T------VAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-----i~G~p~y~-s------l~dl~~~~~iDlaii~vp~~~ 111 (331)
+|+|+|+ |++|+.+++.|.+.|++++ .++.+. +. -.|++++. + ++++.- .+.|++++++|.+.
T Consensus 9 ~viIiG~-G~~G~~la~~L~~~g~~v~-vid~~~--~~~~~~~~~g~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 9 HALLVGY-GRVGSLLGEKLLASDIPLV-VIETSR--TRVDELRERGVRAVLGNAANEEIMQLAHL-ECAKWLILTIPNGY 83 (140)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEE-EEESCH--HHHHHHHHTTCEEEESCTTSHHHHHHTTG-GGCSEEEECCSCHH
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEE-EEECCH--HHHHHHHHcCCCEEECCCCCHHHHHhcCc-ccCCEEEEECCChH
Confidence 4788999 9999999999999999877 666654 21 13555432 2 222211 26899999999765
Q ss_pred HH-HHHHHHHHc
Q 020101 112 AA-AAILEAMEA 122 (331)
Q Consensus 112 ~~-~~v~~~~~~ 122 (331)
.- .++..+.+.
T Consensus 84 ~n~~~~~~a~~~ 95 (140)
T 3fwz_A 84 EAGEIVASARAK 95 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 43 344545444
No 301
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.41 E-value=0.01 Score=48.51 Aligned_cols=66 Identities=8% Similarity=-0.037 Sum_probs=48.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCcc--cccCHHHhhhcCCCCEEEEecChhh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLP--VFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p--~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
..+|+|+|+ |.+|+.+++.+.+.|++ +..+|++... +. ..|.. .+.+++++.+ +.|+++.+||...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIK--NNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEEEECSCHHHHHH--TCSEEEECSCCSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCceEeecCHHHHhc--CCCEEEEeCCCCC
Confidence 567899998 99999999988888998 5577776421 11 12333 4667888777 7899999999763
No 302
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=94.39 E-value=0.046 Score=49.23 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=56.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh----------
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP---------- 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~---------- 110 (331)
...+|+|.|++|-+|+.+++.|.+.|++++ .++.+. .+ +.-..+++++.++.++|++|-+....
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~--~D---l~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~ 84 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVI-PTDVQD--LD---ITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYD 84 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEE-EECTTT--CC---TTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEE-eccCcc--CC---CCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHH
Confidence 457789999999999999999999999887 444332 11 22233455555422589999765321
Q ss_pred --------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 --------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 --------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|+ .+|.+++
T Consensus 85 ~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 85 LAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 13566777888888 4555554
No 303
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.37 E-value=0.038 Score=49.54 Aligned_cols=86 Identities=16% Similarity=0.201 Sum_probs=57.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeC-CCCCCcee--cCcccc-------cCHHHhhhcCCCCEEEEecCh--
Q 020101 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGVT-PKKGGTEH--LGLPVF-------NTVAEAKAETKANASAIYVPP-- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~--g~~iv~~Vn-P~~~g~~i--~G~p~y-------~sl~dl~~~~~iDlaii~vp~-- 109 (331)
+|+|.|++|.+|+.+++.|.+. |+++++... +... ... .++..+ .+++++.+ ++|+++.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~ 78 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-STLADQGVEVRHGDYNQPESLQKAFA--GVSKLLFISGPHY 78 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-HHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECCCCCS
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-hHHhhcCCeEEEeccCCHHHHHHHHh--cCCEEEEcCCCCc
Confidence 4788999999999999999887 888875433 2211 111 122222 23455555 79999977643
Q ss_pred ------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 ------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.++.+++
T Consensus 79 ~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 79 DNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 24566778888899988776665
No 304
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.36 E-value=0.11 Score=48.17 Aligned_cols=90 Identities=12% Similarity=0.075 Sum_probs=58.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCcee------------cCccc-------ccCHHHhhhcCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEH------------LGLPV-------FNTVAEAKAETKA 100 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~~i------------~G~p~-------y~sl~dl~~~~~i 100 (331)
+..+|+|.|++|-+|+.+++.|.+.|+++++... +....+.. .++.. ..+++++.+ ++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CC
Confidence 4567899999999999999999999999874432 21100000 12222 223555555 79
Q ss_pred CEEEEecChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 101 NASAIYVPPP------------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 101 Dlaii~vp~~------------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
|++|-+.... ....+++.|.+.|++.+|.+++
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 9999775421 1345677788889988776664
No 305
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=94.32 E-value=0.13 Score=47.49 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=57.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-ee---cCcccc-------cCHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH---LGLPVF-------NTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~i---~G~p~y-------~sl~dl~~~~~iDlaii~vp~ 109 (331)
+.++|+|.|++|.+|+.+++.|.+.|+++++......... .. .++..+ .+++++.+..++|++|-+...
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 4567899999999999999999999999885433211001 01 122212 234455542238999876432
Q ss_pred ---------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 ---------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 ---------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12456777888888877776654
No 306
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.26 E-value=0.16 Score=46.44 Aligned_cols=91 Identities=18% Similarity=0.128 Sum_probs=56.4
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC--------------CC-cee--cCcccccCHHHhhhcCCCCE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK--------------GG-TEH--LGLPVFNTVAEAKAETKANA 102 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~--------------~g-~~i--~G~p~y~sl~dl~~~~~iDl 102 (331)
++..+|+|.|++|-+|+.+++.|.+.|+++++.+.... .+ ..+ ..+.-..+++++.+ ++|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAG 86 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--CCCE
Confidence 35567899999999999999999999999874433110 00 001 11222233445444 6899
Q ss_pred EEEecCh---------------hhHHHHHHHHHH-cCCcEEEEecC
Q 020101 103 SAIYVPP---------------PFAAAAILEAME-AELDLVVCITE 132 (331)
Q Consensus 103 aii~vp~---------------~~~~~~v~~~~~-~Gi~~ivi~t~ 132 (331)
+|-+... .....+++.|.+ .+++.+|.+++
T Consensus 87 vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 9976532 123455666663 57888777765
No 307
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.25 E-value=0.073 Score=42.87 Aligned_cols=86 Identities=12% Similarity=-0.002 Sum_probs=52.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccc-cC------HHHhhhcCCCCEEEEecChhhH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVF-NT------VAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y-~s------l~dl~~~~~iDlaii~vp~~~~ 112 (331)
.+|+|+|+ |++|+.+++.|.+.|++++ .++.+... +. -.|..++ -+ ++++.- .+.|++++++|.+..
T Consensus 7 ~~v~I~G~-G~iG~~la~~L~~~g~~V~-~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~-~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 7 YEYIVIGS-EAAGVGLVRELTAAGKKVL-AVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDL-EGVSAVLITGSDDEF 83 (141)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCC-TTCSEEEECCSCHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCc-ccCCEEEEecCCHHH
Confidence 45889999 9999999999999999877 66654310 00 1243322 12 222211 268999999985443
Q ss_pred -HHHHHHHHHcCCcEEEEec
Q 020101 113 -AAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 113 -~~~v~~~~~~Gi~~ivi~t 131 (331)
..++..+-+.+...++...
T Consensus 84 n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 84 NLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp HHHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHHhCCceEEEEE
Confidence 4445556566755544433
No 308
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.13 E-value=0.35 Score=47.35 Aligned_cols=106 Identities=13% Similarity=0.149 Sum_probs=66.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee-----cCccccc-CHHHhhh-------------cCCCCE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-----LGLPVFN-TVAEAKA-------------ETKANA 102 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i-----~G~p~y~-sl~dl~~-------------~~~iDl 102 (331)
..+.-|||. |.+|.....+|.+.|++++ ++|.+. +.+ ...|+|. .++++.. -.+.|+
T Consensus 11 ~~~~~ViGl-GyvGlp~A~~La~~G~~V~-~~D~~~--~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDv 86 (431)
T 3ojo_A 11 GSKLTVVGL-GYIGLPTSIMFAKHGVDVL-GVDINQ--QTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDV 86 (431)
T ss_dssp -CEEEEECC-STTHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSE
T ss_pred CCccEEEee-CHHHHHHHHHHHHCCCEEE-EEECCH--HHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCE
Confidence 345677999 9999999999999999987 666554 221 2345554 4554421 025899
Q ss_pred EEEecChhh------------HHHHHHHHHH-cCCcEEEEecCCCChhHHHHHHHHHhccCC
Q 020101 103 SAIYVPPPF------------AAAAILEAME-AELDLVVCITEGIPQHDMVRVKAALNNQSK 151 (331)
Q Consensus 103 aii~vp~~~------------~~~~v~~~~~-~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~g 151 (331)
+++++|... +..+.+...+ ..-..+|+..+..+....+++.+...++.|
T Consensus 87 vii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g 148 (431)
T 3ojo_A 87 FIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLG 148 (431)
T ss_dssp EEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTT
T ss_pred EEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcC
Confidence 999998865 4555555444 233456667777776655555443223344
No 309
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.12 E-value=0.068 Score=48.45 Aligned_cols=88 Identities=10% Similarity=0.011 Sum_probs=55.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC----CCce---ecCcc-cccCHHHhhhcCCCCEEEEecCh----
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK----GGTE---HLGLP-VFNTVAEAKAETKANASAIYVPP---- 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~----~g~~---i~G~p-~y~sl~dl~~~~~iDlaii~vp~---- 109 (331)
..+|+|.|++|.+|+.+++.|.+.|+++++...... .... ....+ +-.-..|+. ++|+++-+...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~d~vi~~a~~~~~~ 83 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---DVRLVYHLASHKSVP 83 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---TEEEEEECCCCCCHH
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---cCCEEEECCccCChH
Confidence 467899999999999999999999999884432211 0011 11101 111123332 57888865432
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 -------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 84 ~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 84 RSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Confidence 12356788888999988776664
No 310
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.08 E-value=0.031 Score=52.95 Aligned_cols=106 Identities=14% Similarity=0.119 Sum_probs=65.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-ecCcccccCHHHhhhcCCCCEEEEecChhh-HHHH--H
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-HLGLPVFNTVAEAKAETKANASAIYVPPPF-AAAA--I 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-i~G~p~y~sl~dl~~~~~iDlaii~vp~~~-~~~~--v 116 (331)
+..+|.|+|. |++|+.+.+.+..+|.+++ ..||...... ..+. .|.+++++.. +.|++++.+|-.. ...+ -
T Consensus 140 ~g~tvGIiG~-G~IG~~va~~~~~fg~~v~-~~d~~~~~~~~~~~~-~~~~l~ell~--~sDivslh~Plt~~T~~li~~ 214 (334)
T 3kb6_A 140 NRLTLGVIGT-GRIGSRVAMYGLAFGMKVL-CYDVVKREDLKEKGC-VYTSLDELLK--ESDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCCHHHHHTTC-EECCHHHHHH--HCSEEEECCCCCTTTTTCBCH
T ss_pred cCcEEEEECc-chHHHHHHHhhcccCceee-ecCCccchhhhhcCc-eecCHHHHHh--hCCEEEEcCCCChhhccCcCH
Confidence 3456889999 9999999999999999988 7787652111 1232 4678999998 6899999998532 2222 2
Q ss_pred HHHHHcCCcEEE-EecCCCChhHHHHHHHHHhccCCcE
Q 020101 117 LEAMEAELDLVV-CITEGIPQHDMVRVKAALNNQSKTR 153 (331)
Q Consensus 117 ~~~~~~Gi~~iv-i~t~G~~e~~~~~l~~~a~~~~gi~ 153 (331)
+.....+-..++ +.+-|- --+...|.++. ++..+.
T Consensus 215 ~~l~~mk~~a~lIN~aRG~-iVde~aL~~aL-~~g~i~ 250 (334)
T 3kb6_A 215 ERISLMKDGVYLINTARGK-VVDTDALYRAY-QRGKFS 250 (334)
T ss_dssp HHHHHSCTTEEEEECSCGG-GBCHHHHHHHH-HTTCEE
T ss_pred HHHhhcCCCeEEEecCccc-cccHHHHHHHH-HhCCce
Confidence 333344444433 333341 12233455554 455444
No 311
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.00 E-value=0.14 Score=47.52 Aligned_cols=80 Identities=10% Similarity=-0.036 Sum_probs=51.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCceecC-----------------cccccCHHHhhhcCCCCEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHLG-----------------LPVFNTVAEAKAETKANAS 103 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~~i~G-----------------~p~y~sl~dl~~~~~iDla 103 (331)
..+|+|||+ |.+|..+...+...|+ +++ .+|++. +...+ +....++++ .+ +.|++
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~-l~D~~~--~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a-~~--~aDiV 76 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAE--GIPQGKALDITHSMVMFGSTSKVIGTDDYAD-IS--GSDVV 76 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEE-EECSSS--SHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GT--TCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCCc--hHHHHHHHHHHhhhhhcCCCcEEEECCCHHH-hC--CCCEE
Confidence 467999999 9999999998888887 754 777654 21111 112245533 33 68999
Q ss_pred EEec--------------Ch--hhHHHHHHHHHHcCCcEEE
Q 020101 104 AIYV--------------PP--PFAAAAILEAMEAELDLVV 128 (331)
Q Consensus 104 ii~v--------------p~--~~~~~~v~~~~~~Gi~~iv 128 (331)
|+++ |. +...++++++.+..-+.++
T Consensus 77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~ii 117 (317)
T 2ewd_A 77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFV 117 (317)
T ss_dssp EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEE
Confidence 9998 32 3345666666666555534
No 312
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.00 E-value=0.055 Score=48.68 Aligned_cols=88 Identities=13% Similarity=0.096 Sum_probs=55.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC-CCc---ee-cCcccccCHHHhhhcCCCCEEEEecCh--------
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK-GGT---EH-LGLPVFNTVAEAKAETKANASAIYVPP-------- 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~-~g~---~i-~G~p~y~sl~dl~~~~~iDlaii~vp~-------- 109 (331)
.+|+|.|+ |-+|+.+++.|.+.|+++++...... ... .+ ..+.-..+++++.+. ++|++|-+...
T Consensus 4 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~~~~~~~~ 81 (286)
T 3gpi_A 4 SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAASEYSDEHY 81 (286)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHHHHC----
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCCCCCHHHH
Confidence 56889995 99999999999999999884432211 000 01 122222334444442 49999977633
Q ss_pred -----hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 -----PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 -----~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.++.+++
T Consensus 82 ~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 82 RLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 23566777777788888776664
No 313
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.92 E-value=0.14 Score=47.66 Aligned_cols=88 Identities=15% Similarity=0.134 Sum_probs=56.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCcee---cCcccc--------cCHHHhhhcCCCCEEEEecC-
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEH---LGLPVF--------NTVAEAKAETKANASAIYVP- 108 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i---~G~p~y--------~sl~dl~~~~~iDlaii~vp- 108 (331)
..+|+|.|++|-+|+.+++.|.+. |+++++.......-... .++..+ .+++++.+ ++|++|-+..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~A~~ 101 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK--KCDVILPLVAI 101 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--HCSEEEECBCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--cCCEEEEcCcc
Confidence 467899999999999999999987 89988544322110111 122222 23555555 6999996432
Q ss_pred --h---------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 109 --P---------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 109 --~---------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+ .....+++.|.+.| +.+|.+++
T Consensus 102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 1 11245788888888 77676665
No 314
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.86 E-value=0.1 Score=51.38 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=60.8
Q ss_pred hhhhhhhhcccccccCCCC----CCCCCCCCcccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee
Q 020101 7 SRVVRSLYMSSEICCGQSR----SFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH 82 (331)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i 82 (331)
+|-.|.+|....-+-.... ++...+ ..+..+|+|||+ |.||..+...+.+.|++++ .+|++. +..
T Consensus 5 ~~~l~~~f~~~~~~~~~~~~~~~~~~~~~-------~~~~~kV~VIGa-G~MG~~iA~~la~~G~~V~-l~D~~~--~~~ 73 (463)
T 1zcj_A 5 AKALQYAFFAEKSANKWSTPSGASWKTAS-------AQPVSSVGVLGL-GTMGRGIAISFARVGISVV-AVESDP--KQL 73 (463)
T ss_dssp HHHHHHHHHGGGGGGSCBCTTCCBTTTCC-------CCCCCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSSH--HHH
T ss_pred HHHHHHHHHHHHHhcCCCCccCCCccccc-------cCCCCEEEEECc-CHHHHHHHHHHHhCCCeEE-EEECCH--HHH
Confidence 4556788877655544221 112211 112357899999 9999999999999999876 667653 110
Q ss_pred ----------------cC-----------cccccCHHHhhhcCCCCEEEEecChhhH--HHHHHHHH
Q 020101 83 ----------------LG-----------LPVFNTVAEAKAETKANASAIYVPPPFA--AAAILEAM 120 (331)
Q Consensus 83 ----------------~G-----------~p~y~sl~dl~~~~~iDlaii~vp~~~~--~~~v~~~~ 120 (331)
.| ..+..+++++ . +.|++|.++|.+.. .+++.++.
T Consensus 74 ~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~--~aDlVIeaVpe~~~~k~~v~~~l~ 137 (463)
T 1zcj_A 74 DAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL-S--TVDLVVEAVFEDMNLKKKVFAELS 137 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGG-T--TCSEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHH-C--CCCEEEEcCCCCHHHHHHHHHHHH
Confidence 01 1233456443 3 68999999997642 44444443
No 315
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.82 E-value=0.22 Score=46.65 Aligned_cols=89 Identities=8% Similarity=-0.075 Sum_probs=55.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcC--CeEEEEeCCCCCCce---ec--C----cccc---cCHHHhhhcCCCCEEEEe
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKKGGTE---HL--G----LPVF---NTVAEAKAETKANASAIY 106 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g--~~iv~~VnP~~~g~~---i~--G----~p~y---~sl~dl~~~~~iDlaii~ 106 (331)
+.+||+|+||+|..|+.+...|.+.| .+++ .+|....... +. . +..+ .++++..+ +.|+++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~-l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~--gaDvVi~~ 83 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLH-LYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALT--GMDLIIVP 83 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEE-EEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHT--TCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEE-EEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcC--CCCEEEEc
Confidence 45789999988999999888887777 4555 5553321001 10 1 1111 13455555 79999998
Q ss_pred cCh----------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 107 VPP----------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 107 vp~----------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.+. +...++++.+.+.+.+.++++.+
T Consensus 84 ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 84 AGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 742 33566778888888877665544
No 316
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.70 E-value=0.16 Score=47.32 Aligned_cols=89 Identities=11% Similarity=-0.076 Sum_probs=55.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHH--cCCeEEEEeC-CC------------CCCcee---------cCcccccCHHHh-h
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIE--YGTKMVGGVT-PK------------KGGTEH---------LGLPVFNTVAEA-K 95 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~--~g~~iv~~Vn-P~------------~~g~~i---------~G~p~y~sl~dl-~ 95 (331)
+..+|+|.|++|-+|+.+++.|.+ .|+++++... +. ..-... ..+.-..+++++ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 456789999999999999999998 8999885432 21 000001 111112234555 3
Q ss_pred hcCCCCEEEEecCh----------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 96 AETKANASAIYVPP----------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 96 ~~~~iDlaii~vp~----------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
. ++|++|-+... .....+++.|.+.|++ +|.+++
T Consensus 89 ~--~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 89 L--HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp S--CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred c--CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 3 79999965431 2234677888888888 666665
No 317
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=93.59 E-value=0.098 Score=47.34 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=54.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCCce-ecCcc-------cccCHHHhhhcCCCCEEEEecCh---
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGGTE-HLGLP-------VFNTVAEAKAETKANASAIYVPP--- 109 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g~~-i~G~p-------~y~sl~dl~~~~~iDlaii~vp~--- 109 (331)
++|+|.|++|-+|+.+++.|.+. |+++++.. .+..... ..++. -..+++++.++.++|++|-+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 81 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASD-IRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSA 81 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE-SCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc-CCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCC
Confidence 45889999999999999999887 78877443 2221111 11111 12234555543468999977432
Q ss_pred --------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 --------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 --------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.++.+++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 82 TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 11335667777788877665554
No 318
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.58 E-value=0.078 Score=49.68 Aligned_cols=78 Identities=9% Similarity=0.040 Sum_probs=55.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecC-------------
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP------------- 108 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp------------- 108 (331)
++|+|.|++|.+|+.+++.|.+.|+ +++ .+|... -..+++++.+ ++|+++-+..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~-~~d~~~---------d~~~l~~~~~--~~d~Vih~a~~~~~~~~~~~~~~ 68 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIF-EVHRQT---------KEEELESALL--KADFIVHLAGVNRPEHDKEFSLG 68 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEE-ECCTTC---------CHHHHHHHHH--HCSEEEECCCSBCTTCSTTCSSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEE-EECCCC---------CHHHHHHHhc--cCCEEEECCcCCCCCCHHHHHHH
Confidence 3688999999999999999999898 877 555521 1234566665 6899886642
Q ss_pred -hhhHHHHHHHHHHcCCc-EEEEecC
Q 020101 109 -PPFAAAAILEAMEAELD-LVVCITE 132 (331)
Q Consensus 109 -~~~~~~~v~~~~~~Gi~-~ivi~t~ 132 (331)
-.....+++.|.+.|++ .++.+++
T Consensus 69 n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 69 NVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 22356688888888987 6665554
No 319
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.56 E-value=0.16 Score=46.69 Aligned_cols=90 Identities=10% Similarity=-0.028 Sum_probs=54.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC------Cc------------e---e-cCcccccCHHHhhhcCCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG------GT------------E---H-LGLPVFNTVAEAKAETKA 100 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~------g~------------~---i-~G~p~y~sl~dl~~~~~i 100 (331)
.+|+|.|++|-+|+.+++.|.+.|+++++....... .. . + ..+.-..+++++.++.++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 468899999999999999999999998744321110 00 0 0 011111234444443358
Q ss_pred CEEEEecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 101 NASAIYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 101 Dlaii~vp~------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
|++|-+... .....+++.|.+.|++.+|.+++
T Consensus 83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 988866532 11345667777788887776664
No 320
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.55 E-value=0.15 Score=47.10 Aligned_cols=85 Identities=16% Similarity=0.123 Sum_probs=53.3
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC--CeEEEEeCCCCCC-c----eec--------Cccc-ccCHHHhhhcCCCCEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKKGG-T----EHL--------GLPV-FNTVAEAKAETKANASAIY 106 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g--~~iv~~VnP~~~g-~----~i~--------G~p~-y~sl~dl~~~~~iDlaii~ 106 (331)
.+|+|||+ |.+|..+...|.+.| .+++ .+|.+... + +.. ...+ ..+.++ .+ +.|+++++
T Consensus 2 ~kI~VIGa-G~~G~~la~~L~~~g~~~~V~-l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~-~~--~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYV-FIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA-LA--DADVVIST 76 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG-GT--TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHH-hC--CCCEEEEe
Confidence 47899997 999999999888877 5665 77765310 0 010 1223 234533 33 68999999
Q ss_pred cChhh--------------------HHHHHHHHHHcCCcEE-EEecC
Q 020101 107 VPPPF--------------------AAAAILEAMEAELDLV-VCITE 132 (331)
Q Consensus 107 vp~~~--------------------~~~~v~~~~~~Gi~~i-vi~t~ 132 (331)
+|... ..++++++.+...+.+ +++|-
T Consensus 77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 123 (309)
T 1hyh_A 77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISN 123 (309)
T ss_dssp CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 98755 3566777766554443 33443
No 321
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=93.50 E-value=0.27 Score=44.02 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=55.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCe---EEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh-------
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTK---MVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP------- 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~---iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~------- 110 (331)
+.++|+|.|++|-+|+.+++.|.+.|+. ....+.... ..+.-..+++++.+..++|++|-+....
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~ 79 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKD-----ADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNI 79 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTT-----CCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCcee-----cccCCHHHHHHHHhhcCCCEEEECceecccccccc
Confidence 3567899999999999999999988761 111122111 1122223466666644599999764221
Q ss_pred ------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.+|.+++
T Consensus 80 ~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 80 KYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 1234678888899988776565
No 322
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=93.47 E-value=0.12 Score=47.30 Aligned_cols=91 Identities=9% Similarity=0.116 Sum_probs=54.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--ee------cCcccc-------cCHHHhhhcCCCCEEEEe
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--EH------LGLPVF-------NTVAEAKAETKANASAIY 106 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--~i------~G~p~y-------~sl~dl~~~~~iDlaii~ 106 (331)
..+|+|.|++|-+|+.+++.|.+.|+++++......... .+ .++..+ .+++++.+..++|++|-+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 356889999999999999999999999874432211000 00 012222 224444442247999876
Q ss_pred cChh------------------hHHHHHHHHHHcCC-cEEEEecC
Q 020101 107 VPPP------------------FAAAAILEAMEAEL-DLVVCITE 132 (331)
Q Consensus 107 vp~~------------------~~~~~v~~~~~~Gi-~~ivi~t~ 132 (331)
.... ....+++.|.+.++ +.+|.+++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 5321 13456677777786 66666654
No 323
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=93.45 E-value=0.19 Score=47.88 Aligned_cols=92 Identities=16% Similarity=0.141 Sum_probs=66.3
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC--------------Cc---e---------ecC--ccccc--
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG--------------GT---E---------HLG--LPVFN-- 89 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~--------------g~---~---------i~G--~p~y~-- 89 (331)
.+.++|+|.|. |++|+.++|.+.+.+.++++.-||..+ |+ + +.| ++++.
T Consensus 5 ~~~~kvgInGF-GRIGrlv~R~~~~~~veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 5 ARELTVGINGF-GRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CCeeEEEEECC-ChHHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 35688999999 999999999888888999976666321 10 0 223 23442
Q ss_pred CHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 90 sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+.++++= +.++|+++-++......+-+...++.|.|.++|-.+
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsap 127 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAP 127 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSC
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCC
Confidence 4555551 236999999999988888899999999998776443
No 324
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=93.45 E-value=0.19 Score=45.96 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=55.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc--------eecCccc-------ccCHHHhhhcCCCCEEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT--------EHLGLPV-------FNTVAEAKAETKANASAI 105 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~--------~i~G~p~-------y~sl~dl~~~~~iDlaii 105 (331)
.+.+|.|.|++|-+|+.+++.|.+.|+++++......... .-.++.. ..+++++.+..++|++|-
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 3577899999999999999999999999875443221000 0011211 123444444224799886
Q ss_pred ecChh------------------hHHHHHHHHHHcCC-cEEEEecC
Q 020101 106 YVPPP------------------FAAAAILEAMEAEL-DLVVCITE 132 (331)
Q Consensus 106 ~vp~~------------------~~~~~v~~~~~~Gi-~~ivi~t~ 132 (331)
+.... ....+++.|.+.|+ +.+|.+++
T Consensus 93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 64321 13356777777886 67666654
No 325
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=93.42 E-value=0.071 Score=48.06 Aligned_cols=84 Identities=15% Similarity=0.049 Sum_probs=53.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee-cCcccccCHHHhhhcCCCCEEEEecChh------------
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH-LGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i-~G~p~y~sl~dl~~~~~iDlaii~vp~~------------ 110 (331)
+|+|.|++|.+|+.+++.|. .|++++ .++.+. ..+ ..+.-..+++++.+..++|+++-+....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~-~~~r~~--~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~ 77 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLI-ALDVHS--KEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELA 77 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEE-EECTTC--SSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEE-Eecccc--ccccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHH
Confidence 68899999999999999988 799988 444332 111 1222233455555522489999775321
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++ ++.+++
T Consensus 78 ~~~n~~~~~~l~~a~~~~~~~-~v~~SS 104 (299)
T 1n2s_A 78 QLLNATSVEAIAKAANETGAW-VVHYST 104 (299)
T ss_dssp HHHHTHHHHHHHHHHTTTTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCc-EEEEec
Confidence 145667777777885 454554
No 326
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=93.41 E-value=0.15 Score=46.31 Aligned_cols=89 Identities=13% Similarity=0.078 Sum_probs=54.8
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc--CCeEEEEe-CCCCC-C-cee-cCcccccCHHHhhhcCCCCEEEEecChh-------
Q 020101 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGV-TPKKG-G-TEH-LGLPVFNTVAEAKAETKANASAIYVPPP------- 110 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~--g~~iv~~V-nP~~~-g-~~i-~G~p~y~sl~dl~~~~~iDlaii~vp~~------- 110 (331)
+|+|.|++|-+|+.+++.|.+. |+++++.. ++... + ..+ ..+.-..+++++.++.++|+++-+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 80 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKD 80 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccC
Confidence 3788999999999999998887 78877432 22210 0 001 1111122355555434699999765321
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ----------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ----------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.++.+++
T Consensus 81 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 112 (317)
T 3ajr_A 81 PALAYKVNMNGTYNILEAAKQHRVEKVVIPST 112 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHhhhhhHHHHHHHHHHHHcCCCEEEEecC
Confidence 1345677788889987776654
No 327
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=93.36 E-value=0.12 Score=46.91 Aligned_cols=88 Identities=16% Similarity=0.111 Sum_probs=50.2
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee-cCcccccCHHHhhhcCCCCEEEEecChh----------
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH-LGLPVFNTVAEAKAETKANASAIYVPPP---------- 110 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i-~G~p~y~sl~dl~~~~~iDlaii~vp~~---------- 110 (331)
.+|+|.|++|.+|+.+++.|.+.|+++++ ++.+... ..+ ..+.-..+++++.+..++|++|-+....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~ 81 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVG-CGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPD 81 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEE-EC------------------CHHHHHHHCCSEEEECC-------------
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEE-EccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHH
Confidence 46889999999999999999999999874 4422100 000 1111223444554422489988765321
Q ss_pred --------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 --------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 --------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++ +|.+++
T Consensus 82 ~~~~~n~~~~~~l~~a~~~~~~~-~v~~SS 110 (315)
T 2ydy_A 82 AASQLNVDASGNLAKEAAAVGAF-LIYISS 110 (315)
T ss_dssp ------CHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 135577778888875 454554
No 328
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=93.36 E-value=0.24 Score=45.83 Aligned_cols=90 Identities=18% Similarity=0.113 Sum_probs=56.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCcee-------cCccc-------ccCHHHhhhcCCCCEEEEe
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEH-------LGLPV-------FNTVAEAKAETKANASAIY 106 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~~i-------~G~p~-------y~sl~dl~~~~~iDlaii~ 106 (331)
..+|+|.|++|-+|+.+++.|.+.|+++++... +... ... .++.. ..+++++.+..++|++|-+
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc-chhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 457899999999999999999999999875432 2211 110 11211 1234455442248999977
Q ss_pred cCh---h---------------hHHHHHHHHHHcC-CcEEEEecC
Q 020101 107 VPP---P---------------FAAAAILEAMEAE-LDLVVCITE 132 (331)
Q Consensus 107 vp~---~---------------~~~~~v~~~~~~G-i~~ivi~t~ 132 (331)
... . ....+++.|.+.+ ++.+|.+++
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 541 1 1234667777776 788777776
No 329
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.27 E-value=0.2 Score=49.44 Aligned_cols=124 Identities=12% Similarity=0.007 Sum_probs=70.6
Q ss_pred hhhhhhcccccccCCCCCCCCCCCCcccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-c-------
Q 020101 9 VVRSLYMSSEICCGQSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-T------- 80 (331)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~------- 80 (331)
.||...|+.|--.++-.-++.+. .....-..+..+|+|||+ |.||..++..+.+.|++++ .+|++... .
T Consensus 22 ~~~~~~~~a~~~~~~w~~p~~~~-~~~~~~~~~i~kVaVIGa-G~MG~~IA~~la~aG~~V~-l~D~~~e~a~~~i~~~l 98 (460)
T 3k6j_A 22 EVRSYLMEAHSLAGQWSLPNDRG-DHTNSEAYDVNSVAIIGG-GTMGKAMAICFGLAGIETF-LVVRNEQRCKQELEVMY 98 (460)
T ss_dssp HHHHHHHHTTCCTTSCBCSTTSC-BTTSCCCCCCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHhhccccCCCCcc-ccccCCcccCCEEEEECC-CHHHHHHHHHHHHCCCeEE-EEECcHHHHHHHHHHHH
Confidence 46777777776665533332110 000111123467999999 9999999999999999977 66665410 0
Q ss_pred -e--ecC-------------cccccCHHHhhhcCCCCEEEEecChhh--HHHHHHHHHHc-CCcEEE-EecCCCChhH
Q 020101 81 -E--HLG-------------LPVFNTVAEAKAETKANASAIYVPPPF--AAAAILEAMEA-ELDLVV-CITEGIPQHD 138 (331)
Q Consensus 81 -~--i~G-------------~p~y~sl~dl~~~~~iDlaii~vp~~~--~~~~v~~~~~~-Gi~~iv-i~t~G~~e~~ 138 (331)
. -.| +....+++++ . +.|++|.++|.+. -.+++.++.+. .-..++ .-|++++.++
T Consensus 99 ~~~~~~G~l~~~~~~~~~~~i~~t~dl~al-~--~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ 173 (460)
T 3k6j_A 99 AREKSFKRLNDKRIEKINANLKITSDFHKL-S--NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNE 173 (460)
T ss_dssp HHHHHTTSCCHHHHHHHHTTEEEESCGGGC-T--TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHH
T ss_pred HHHHHcCCCCHHHHHHHhcceEEeCCHHHH-c--cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHH
Confidence 0 011 2234456543 3 6899999999753 33455554432 223433 2456666443
No 330
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=93.24 E-value=0.16 Score=46.09 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=54.3
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-ee-cCcccc-------cCHHHhhhcCCCCEEEEecChh----
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH-LGLPVF-------NTVAEAKAETKANASAIYVPPP---- 110 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~i-~G~p~y-------~sl~dl~~~~~iDlaii~vp~~---- 110 (331)
+|+|.|++|-+|+.+++.|.+.|+++++......... .. .++..+ .+++++.++..+|.++.+....
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 81 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKV 81 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchh
Confidence 5889999999999999999999999874332111001 11 122211 2244444322589888664211
Q ss_pred --------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 --------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 --------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++.+|.+++
T Consensus 82 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 82 SVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 1345667777888888776665
No 331
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.23 E-value=0.1 Score=46.78 Aligned_cols=29 Identities=17% Similarity=0.266 Sum_probs=25.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVG 71 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~ 71 (331)
.+|+|.|++|-+|+.+.+.|.+.|++++.
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~ 32 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRL 32 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEE
Confidence 56888999999999999999998988763
No 332
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=93.04 E-value=0.27 Score=44.28 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=29.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
+..+|+|+|+ |..|..++++|...|..-+..+|+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3567899999 88999999999999985444887764
No 333
>2g6t_A Uncharacterized protein, homolog HI1244 from haemophilus influenzae; hypothetical protein, structural genomics, PSI; 3.00A {Clostridium acetobutylicum} SCOP: c.147.1.1
Probab=93.02 E-value=0.16 Score=46.93 Aligned_cols=117 Identities=13% Similarity=0.103 Sum_probs=78.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc----CCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY----GTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~----g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
.+|+|+|+ |..|...+..++.. .+.+++..++..-++-+.|.|+++ .+|+... +.|-++|+..- .-.++=.+
T Consensus 2 ~~~~I~g~-~~~~~~a~n~~~~~~~~~~~~i~~~~~~dk~a~~idg~~v~s-~~~i~~~-e~DyiiIa~~~-~~~qi~~~ 77 (306)
T 2g6t_A 2 YKCLIWGV-NDEYTLAYDKLLFEISKGNLSIEALISKDKYAKYIDGKEVID-KTEISNY-EFDYIIIFNKE-RYSDIKNE 77 (306)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHTTSEEEEEEECSSCSCSBSSSCBEEC-GGGGGGS-CCSEEEECCTT-THHHHHHH
T ss_pred ceEEEEec-cHHHHHHHHHHHHHhhcccceEEEEecchhhhhhhCCeeccC-HHHHhcC-CCCEEEEeccc-cHHHHHHH
Confidence 46889999 66777777665532 378888788776667899999997 4555542 79999999776 56666677
Q ss_pred HHHcCCcEEEEecCCC---ChhHHHHHHHHHhccCCcEEEccCCCCcccC
Q 020101 119 AMEAELDLVVCITEGI---PQHDMVRVKAALNNQSKTRLVGPNCPGVIKP 165 (331)
Q Consensus 119 ~~~~Gi~~ivi~t~G~---~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p 165 (331)
+++.||+.==|++-.+ +.-+.++-.+ . +.+++.||-.||.|-.-.
T Consensus 78 l~~~gi~~~ki~~~~~~~i~~~~~~r~~r-L-~N~~~TIISnNC~Gg~iy 125 (306)
T 2g6t_A 78 ALELGIPERKILNGKFFFISNFDFKRYCK-L-IENPITIISDDCWGGLVS 125 (306)
T ss_dssp HHHTTCCGGGEECSGGGGSTTCCHHHHHH-H-HHTTCEEEESSSHHHHHH
T ss_pred HHHcCCchhheeeeEEEecccccHHHHHH-h-cCCCcEEEecCchhHHHH
Confidence 7798875422233321 2223332222 2 578899999999875443
No 334
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=92.97 E-value=0.2 Score=47.49 Aligned_cols=86 Identities=15% Similarity=0.023 Sum_probs=60.9
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc----CCeEEEEeCC-------------CCCC----------ce--ecC--ccccc--
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY----GTKMVGGVTP-------------KKGG----------TE--HLG--LPVFN-- 89 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~----g~~iv~~VnP-------------~~~g----------~~--i~G--~p~y~-- 89 (331)
+||+|.|+ |++|+.+++.+.+. ++++++.-++ ...| +. +.| ++++.
T Consensus 2 ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcC
Confidence 68999999 99999999988776 5788866553 1100 11 223 23442
Q ss_pred CHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 90 sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
+.++++- +.++|+++.+++.....+.+...++.|.+.+++
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVvi 121 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII 121 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEE
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEE
Confidence 4455542 237999999999888888888999999998665
No 335
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=92.93 E-value=0.27 Score=44.46 Aligned_cols=85 Identities=15% Similarity=0.171 Sum_probs=53.2
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce--ecCcccc-cC-----HHHhhhcCCCCEEEEecCh-----
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE--HLGLPVF-NT-----VAEAKAETKANASAIYVPP----- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~--i~G~p~y-~s-----l~dl~~~~~iDlaii~vp~----- 109 (331)
+|+|.|++|-+|+.+++.|.+.|+++++ ++..... .. ..++..+ -+ +.++.+ . |++|-+...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~-d~vih~A~~~~~~~ 77 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVV-VDNLSSGRREFVNPSAELHVRDLKDYSWGAGIK--G-DVVFHFAANPEVRL 77 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE-ECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCC--C-SEEEECCSSCSSSG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEE-EeCCCCCchhhcCCCceEEECccccHHHHhhcC--C-CEEEECCCCCCchh
Confidence 6889999999999999999999999874 3322110 11 1122211 12 222222 3 888865431
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 -------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
..+..+++.|.+.|++.+|.+++
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 12346778888889988776665
No 336
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.91 E-value=0.11 Score=46.41 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=55.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce--ecCcccc-cCHHHhhhcCCCCEEEEecCh-----hhHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE--HLGLPVF-NTVAEAKAETKANASAIYVPP-----PFAAA 114 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~--i~G~p~y-~sl~dl~~~~~iDlaii~vp~-----~~~~~ 114 (331)
++|+|.|+ |.+|+.+++.|.+.|+++++.+........ -.++..+ -++.++. -.++|++|-+... .....
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~~~~~~~~~ 83 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-LDGVTHLLISTAPDSGGDPVLAA 83 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-CTTCCEEEECCCCBTTBCHHHHH
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-cCCCCEEEECCCccccccHHHHH
Confidence 57899998 999999999999999998854332210000 1233322 2333322 2379999987743 22455
Q ss_pred HHHHHHH--cCCcEEEEecC
Q 020101 115 AILEAME--AELDLVVCITE 132 (331)
Q Consensus 115 ~v~~~~~--~Gi~~ivi~t~ 132 (331)
+++.|.+ .+++.+|.+++
T Consensus 84 l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 84 LGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHhhcCCceEEEEeec
Confidence 6666666 68888776554
No 337
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.87 E-value=0.093 Score=52.12 Aligned_cols=88 Identities=17% Similarity=0.096 Sum_probs=58.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee----------------cC-------------cccccCHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----------------LG-------------LPVFNTVAE 93 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i----------------~G-------------~p~y~sl~d 93 (331)
.+|+|||+ |.||..++..+.+.|++++ .+|++. +.. .| +....++++
T Consensus 6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~-l~D~~~--e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (483)
T 3mog_A 6 QTVAVIGS-GTMGAGIAEVAASHGHQVL-LYDISA--EALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA 81 (483)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEE-EECSCH--HHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEE-EEECCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH
Confidence 46889999 9999999999999999876 667654 211 11 223445654
Q ss_pred hhhcCCCCEEEEecChhhH--HHHHHHHHHc-CCcEEE-EecCCCChh
Q 020101 94 AKAETKANASAIYVPPPFA--AAAILEAMEA-ELDLVV-CITEGIPQH 137 (331)
Q Consensus 94 l~~~~~iDlaii~vp~~~~--~~~v~~~~~~-Gi~~iv-i~t~G~~e~ 137 (331)
+ + +.|++|.++|.+.. .+++.++.+. .-..++ .-+++++.+
T Consensus 82 ~-~--~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~ 126 (483)
T 3mog_A 82 L-A--AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT 126 (483)
T ss_dssp G-G--GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred h-c--CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH
Confidence 4 3 58999999998743 4566665443 233344 346677654
No 338
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.84 E-value=0.23 Score=46.70 Aligned_cols=88 Identities=10% Similarity=-0.015 Sum_probs=56.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCC--c---ee------cC----cccccCHHHhhhcCCCCEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGG--T---EH------LG----LPVFNTVAEAKAETKANAS 103 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g--~---~i------~G----~p~y~sl~dl~~~~~iDla 103 (331)
++..||+|+|+ |.+|..+...+...|+ +++ .+|.+... . ++ .+ +....++++..+ +.|++
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~-L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~--~aDiV 82 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT--GADCV 82 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEE-EECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT--TCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEE-EEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC--CCCEE
Confidence 44578999999 9999999888888887 744 66655410 0 00 11 112356775455 78999
Q ss_pred EEec--Chh-------------------hHHHHHHHHHHcCCcEEEEec
Q 020101 104 AIYV--PPP-------------------FAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 104 ii~v--p~~-------------------~~~~~v~~~~~~Gi~~ivi~t 131 (331)
|+++ |.. ...++++++.+...+.+++..
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~ 131 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV 131 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 9998 532 256677777777666655444
No 339
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.64 E-value=0.22 Score=43.25 Aligned_cols=86 Identities=15% Similarity=0.184 Sum_probs=55.0
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ce---ecCccccc----C---HHHhhhcCCCCEEEEecChhhH
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TE---HLGLPVFN----T---VAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~---i~G~p~y~----s---l~dl~~~~~iDlaii~vp~~~~ 112 (331)
+|+|+|+ |++|+.+++.|.+.|++++ .++.+... +. ..|.+++. + +++..- .+.|+++++++.+..
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~-vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~d~~ 78 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVV-IINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEV-SKNDVVVILTPRDEV 78 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEE-EEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTC-CTTCEEEECCSCHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCc-ccCCEEEEecCCcHH
Confidence 5889998 9999999999999999877 66654310 11 12443332 2 333211 268999999998876
Q ss_pred HHHHHHHHH--cCCcEEEEecC
Q 020101 113 AAAILEAME--AELDLVVCITE 132 (331)
Q Consensus 113 ~~~v~~~~~--~Gi~~ivi~t~ 132 (331)
-..+...++ .+...++.-+.
T Consensus 79 n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 79 NLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp HHHHHHHHHHTSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCeEEEEEe
Confidence 555555444 46776565443
No 340
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=92.62 E-value=0.38 Score=45.06 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=26.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHH-HcCCeEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAI-EYGTKMVGGV 73 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~-~~g~~iv~~V 73 (331)
++|+|.|++|-+|+.+++.|. +.|+++++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~ 34 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 478899999999999999999 8999987443
No 341
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.52 E-value=0.3 Score=43.93 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=28.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKK 77 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~ 77 (331)
..+|+|+|+ |..|..++++|...|. ++. .||+..
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~-lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLT-LLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEE-EECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEE-EEcCCC
Confidence 457899999 8999999999999997 455 888765
No 342
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=92.30 E-value=0.3 Score=44.24 Aligned_cols=85 Identities=13% Similarity=0.088 Sum_probs=55.2
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce---------ecCcccccCHHHhhhcCCCCEEEEecCh-----
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE---------HLGLPVFNTVAEAKAETKANASAIYVPP----- 109 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~---------i~G~p~y~sl~dl~~~~~iDlaii~vp~----- 109 (331)
+|+|.|++|-+|+.+++.|.+.| .++...+......+ ...+.- .++.++.+ ++|+++-+...
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK--GAEEVWHIAANPDVRI 78 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT--TCSEEEECCCCCCCC-
T ss_pred EEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc--CCCEEEECCCCCChhh
Confidence 57899999999999999999888 44434433221011 012222 45666665 79999865431
Q ss_pred -------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 110 -------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 110 -------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.....+++.|.+.|++.+|.+++
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 12344677788889988777776
No 343
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=92.22 E-value=0.53 Score=43.01 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=54.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc---C---CeEEEEeCCCCCC--cee------cCcccc-------cCHHHhhhcCCCCE
Q 020101 44 RVICQGITGKNGTFHTEQAIEY---G---TKMVGGVTPKKGG--TEH------LGLPVF-------NTVAEAKAETKANA 102 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~---g---~~iv~~VnP~~~g--~~i------~G~p~y-------~sl~dl~~~~~iDl 102 (331)
+|+|.|++|-+|+.+++.|.+. | +++++.......+ +.. .++..+ .+++++.. ++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 79 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR--GVDA 79 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCCE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc--CCCE
Confidence 6889999999999999999885 7 8887443321100 111 112111 23444444 7999
Q ss_pred EEEecCh------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 103 SAIYVPP------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 103 aii~vp~------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+|-+... .....+++.|.+.+++.+|.+++
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS 127 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVST 127 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 9976532 12346777888889987776664
No 344
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.20 E-value=0.081 Score=50.67 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=52.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHH-cCCeEEEEeC---CCCCC-ce-e--c----------C--c------c-cccCHHHhh
Q 020101 43 TRVICQGITGKNGTFHTEQAIE-YGTKMVGGVT---PKKGG-TE-H--L----------G--L------P-VFNTVAEAK 95 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~-~g~~iv~~Vn---P~~~g-~~-i--~----------G--~------p-~y~sl~dl~ 95 (331)
++|+|+|+ |.+|..+...|.+ .|+++. .++ +.... +. + . | . . +..++++..
T Consensus 3 mkI~ViGa-G~~G~~~a~~La~~~G~~V~-~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 3 VKVCVCGG-GNGAHTLSGLAASRDGVEVR-VLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI 80 (404)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTSTTEEEE-EECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCEEE-EEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh
Confidence 57899999 9999999998877 488766 666 32100 00 0 0 2 1 1 344677766
Q ss_pred hcCCCCEEEEecChhhHHHHHHHHHH
Q 020101 96 AETKANASAIYVPPPFAAAAILEAME 121 (331)
Q Consensus 96 ~~~~iDlaii~vp~~~~~~~v~~~~~ 121 (331)
+ +.|++++++|+....++++++..
T Consensus 81 ~--~aD~Vilav~~~~~~~v~~~l~~ 104 (404)
T 3c7a_A 81 S--GADVVILTVPAFAHEGYFQAMAP 104 (404)
T ss_dssp T--TCSEEEECSCGGGHHHHHHHHTT
T ss_pred C--CCCEEEEeCchHHHHHHHHHHHh
Confidence 5 68999999999999888887654
No 345
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.18 E-value=0.13 Score=49.56 Aligned_cols=65 Identities=15% Similarity=0.277 Sum_probs=43.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCc-e---ecCccc--ccCHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-E---HLGLPV--FNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~-~---i~G~p~--y~sl~dl~~~~~iDlaii~vp~ 109 (331)
+..+|+|+|+ |.+|+.+++.+...|. +++ .+|+..... + ..|..+ |.++.++.. +.|+++.+||.
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~-v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~--~aDvVi~at~~ 237 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVL-VANRTYERAVELARDLGGEAVRFDELVDHLA--RSDVVVSATAA 237 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEE-EECSSHHHHHHHHHHHTCEECCGGGHHHHHH--TCSEEEECCSS
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEE-EEeCCHHHHHHHHHHcCCceecHHhHHHHhc--CCCEEEEccCC
Confidence 5677999999 9999999999999998 666 788764210 1 123322 234555544 56777777654
No 346
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.06 E-value=0.24 Score=46.14 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=50.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCCCceec--------C------cccc-cCHHHhhhcCCCCEEEEe
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEHL--------G------LPVF-NTVAEAKAETKANASAIY 106 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~g~~i~--------G------~p~y-~sl~dl~~~~~iDlaii~ 106 (331)
+|+|||+ |.+|..++..+...|+ +++ .+|.+. +... + ..+. .+.+++ . +.|+++++
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~-l~D~~~--~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~-~--~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMV-LIDVDK--KRAEGDALDLIHGTPFTRRANIYAGDYADL-K--GSDVVIVA 74 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSH--HHHHHHHHHHHHHGGGSCCCEEEECCGGGG-T--TCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEeCCh--HHHHHHHHHHHhhhhhcCCcEEEeCCHHHh-C--CCCEEEEc
Confidence 6889999 9999999888888787 766 677653 1111 1 1111 233332 3 68999999
Q ss_pred cChhh----------------HHHHHHHHHHcCCcEEE
Q 020101 107 VPPPF----------------AAAAILEAMEAELDLVV 128 (331)
Q Consensus 107 vp~~~----------------~~~~v~~~~~~Gi~~iv 128 (331)
+|... ..++++++.+...+.++
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~i 112 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIV 112 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 98533 35666666665555433
No 347
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=91.67 E-value=0.07 Score=50.75 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=60.2
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCC---C----------CCC----------ce--ecC--ccccc--CHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTP---K----------KGG----------TE--HLG--LPVFN--TVA 92 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP---~----------~~g----------~~--i~G--~p~y~--sl~ 92 (331)
+||+|.|+ |++|+.+++.+.+. .+++++.-+. + ..| +. +.| ++++. +.+
T Consensus 3 ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~ 81 (342)
T 2ep7_A 3 IKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPS 81 (342)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChh
Confidence 68999999 99999999988776 7899865443 1 011 01 122 23443 344
Q ss_pred Hhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 93 EAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 93 dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
+++- +.++|+++.+++.....+.....++.|.+.+++
T Consensus 82 ~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvi 119 (342)
T 2ep7_A 82 QIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVII 119 (342)
T ss_dssp GCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEE
T ss_pred hCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEe
Confidence 4431 126899999999988888889999999988664
No 348
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.66 E-value=0.39 Score=45.05 Aligned_cols=83 Identities=10% Similarity=-0.028 Sum_probs=53.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCceec---------------C--cccccCHHHhhhcCCCCEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGTEHL---------------G--LPVFNTVAEAKAETKANAS 103 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~~i~---------------G--~p~y~sl~dl~~~~~iDla 103 (331)
..+|+|+|+ |.+|..+...+...|+ +++ .+|.+.. ... . +....++++ .. +.|++
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~-L~Di~~~--~l~~~~~~l~~~~~~~~~~~~i~~t~d~~a-l~--~aD~V 86 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVY-MFDIIEG--VPQGKALDLNHCMALIGSPAKIFGENNYEY-LQ--NSDVV 86 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSTT--HHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GT--TCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEE-EEECCHH--HHHHHHHHHHhHhhccCCCCEEEECCCHHH-HC--CCCEE
Confidence 358999999 9999998888888887 744 7666542 111 1 112245533 33 68999
Q ss_pred EEec--Ch--------------hhHHHHHHHHHHcCCcEEEEec
Q 020101 104 AIYV--PP--------------PFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 104 ii~v--p~--------------~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
|+++ |. +...++++++.+...+.++++.
T Consensus 87 I~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 130 (328)
T 2hjr_A 87 IITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI 130 (328)
T ss_dssp EECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEe
Confidence 9998 43 2355666777666666554433
No 349
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.59 E-value=0.47 Score=43.34 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=55.2
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCce-------------e-cCcccccCHHHhhhcCCCCEEEEec
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTE-------------H-LGLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~~-------------i-~G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
++|+|.|++|-+|+.+++.|.+.|+++++... ....... + ..+.-..+++++.+..++|++|-+.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 36889999999999999999999999874432 1110000 0 1111122355555522389999765
Q ss_pred Chh------------------hHHHHHHHHHHcCCc-EEEEecC
Q 020101 108 PPP------------------FAAAAILEAMEAELD-LVVCITE 132 (331)
Q Consensus 108 p~~------------------~~~~~v~~~~~~Gi~-~ivi~t~ 132 (331)
... ....+++.|.+.+++ .+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS 125 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 125 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 421 134567788888886 6665554
No 350
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.59 E-value=0.23 Score=47.16 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=57.1
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHH-cCCeEEEEeCCCCCC-ce----e---cC--cccccCHHHhhhcCCCCEEEEecC
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKGG-TE----H---LG--LPVFNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~-~g~~iv~~VnP~~~g-~~----i---~G--~p~y~sl~dl~~~~~iDlaii~vp 108 (331)
++..+|+|||+ |.+|+.+++.+.. .+.+.+...|++... +. . .| +..+.+++++.. +.|+++.+||
T Consensus 127 ~~~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~--~aDiVi~aTp 203 (350)
T 1x7d_A 127 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVK--GVDIITTVTA 203 (350)
T ss_dssp TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHT--TCSEEEECCC
T ss_pred ccCCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHh--cCCEEEEecc
Confidence 45678999999 9999999888754 466555588876421 11 1 15 346788998887 7999999999
Q ss_pred hhhHHHHH-HHHHHcCCcE
Q 020101 109 PPFAAAAI-LEAMEAELDL 126 (331)
Q Consensus 109 ~~~~~~~v-~~~~~~Gi~~ 126 (331)
...+..++ .+.++.|.+.
T Consensus 204 s~~~~pvl~~~~l~~G~~V 222 (350)
T 1x7d_A 204 DKAYATIITPDMLEPGMHL 222 (350)
T ss_dssp CSSEEEEECGGGCCTTCEE
T ss_pred CCCCCceecHHHcCCCCEE
Confidence 76322222 2455667654
No 351
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=91.57 E-value=1.1 Score=40.74 Aligned_cols=89 Identities=13% Similarity=0.087 Sum_probs=55.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe-CCCCCCc-----ee---cCccc-------ccCHHHhhhcCCCCEEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGV-TPKKGGT-----EH---LGLPV-------FNTVAEAKAETKANASAI 105 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V-nP~~~g~-----~i---~G~p~-------y~sl~dl~~~~~iDlaii 105 (331)
..+|+|.|++|-+|+.+++.|.+.|+++++.+ ++....+ .. .++.. ..+++++.+ ++|+++-
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA--GCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT--TCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc--CCCEEEE
Confidence 35688999999999999999999999987544 3321100 00 01211 234555555 6898885
Q ss_pred ecCh---------h--------hHHHHHHHHHHcC-CcEEEEecC
Q 020101 106 YVPP---------P--------FAAAAILEAMEAE-LDLVVCITE 132 (331)
Q Consensus 106 ~vp~---------~--------~~~~~v~~~~~~G-i~~ivi~t~ 132 (331)
+..+ + ....+++.|.+.+ ++.+|..++
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS 131 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSS 131 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEec
Confidence 4311 1 1234566777775 888776665
No 352
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=91.37 E-value=0.62 Score=42.57 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=53.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC-Cce--------------e-cCcccccCHHHhhhcCCCCEEEEec
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG-GTE--------------H-LGLPVFNTVAEAKAETKANASAIYV 107 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~-g~~--------------i-~G~p~y~sl~dl~~~~~iDlaii~v 107 (331)
+|+|.|++|-+|+.+++.|.+.|++++...+.... .+. + ..+.-..+++++.++.++|++|-+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A 81 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECC
Confidence 57899999999999999999999997743221110 000 0 0111112344444433589998654
Q ss_pred Ch------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 108 PP------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 108 p~------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.. .....+++.|.+.|++.+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 21 11234566677788887776664
No 353
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=91.35 E-value=0.54 Score=43.81 Aligned_cols=31 Identities=32% Similarity=0.546 Sum_probs=27.0
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V 73 (331)
.+|+|.|++|-+|+.+++.|.+.|+++++..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 55 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIV 55 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 5688999999999999999999999987543
No 354
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=91.23 E-value=0.52 Score=48.23 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=56.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCc---ee-----cCcccc-------cCHHHhhhcCCCCEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGT---EH-----LGLPVF-------NTVAEAKAETKANASA 104 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~---~i-----~G~p~y-------~sl~dl~~~~~iDlai 104 (331)
+..+|+|.|++|-+|+.+++.|.+.|+++++... +....+ .+ .++..+ .+++++.++.++|++|
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 3467899999999999999999999999874432 211000 00 112111 2344444433689998
Q ss_pred EecChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 105 IYVPPP------------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 105 i~vp~~------------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
-+.... ....+++.|.+.+++.+|.+++
T Consensus 90 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS 135 (699)
T 1z45_A 90 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135 (699)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 764321 1344667777788888776665
No 355
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.19 E-value=0.67 Score=42.88 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=39.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC-c----ee-cC---------cccccCHHHhhhcCCCCEEEEe
Q 020101 44 RVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG-T----EH-LG---------LPVFNTVAEAKAETKANASAIY 106 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g-~----~i-~G---------~p~y~sl~dl~~~~~iDlaii~ 106 (331)
+|+|+|+ |.+|..+...+... +.+++ .+|.+... + +. .. +....+.++ .+ +.|+++++
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~-l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~--~aDvViia 76 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELV-LLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TA--NSDIVIIT 76 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GT--TCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HC--CCCEEEEe
Confidence 6899999 99999988877764 67766 66654410 0 01 11 122245666 33 68999999
Q ss_pred cCh
Q 020101 107 VPP 109 (331)
Q Consensus 107 vp~ 109 (331)
+|.
T Consensus 77 v~~ 79 (310)
T 1guz_A 77 AGL 79 (310)
T ss_dssp CSC
T ss_pred CCC
Confidence 964
No 356
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.10 E-value=0.37 Score=44.29 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=27.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPK 76 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~ 76 (331)
..+|+|+|+ |.+|..+...|...|+ +++ .+|.+
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~-l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIV-LEDIA 41 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 468999999 9999999888888887 766 66664
No 357
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.05 E-value=0.3 Score=43.60 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=32.7
Q ss_pred ccc-CCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 36 AVF-VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 36 ~ll-~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
++| .-+..+|+|||+ |++|..-++.|.+.|.+++ .|+|..
T Consensus 24 Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~Vt-Vvap~~ 64 (223)
T 3dfz_A 24 TVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAIT-VVAPTV 64 (223)
T ss_dssp EEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEE-EECSSC
T ss_pred ccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEE-EECCCC
Confidence 344 556778999999 8898888899999999877 888865
No 358
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.03 E-value=0.69 Score=42.94 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=52.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCC--Cce-----e--cCcccccCHHHhhhcCCCCEEEEecC--
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKG--GTE-----H--LGLPVFNTVAEAKAETKANASAIYVP-- 108 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~--g~~-----i--~G~p~y~sl~dl~~~~~iDlaii~vp-- 108 (331)
..||+|||+ |.+|......+...|+ +++ .+|.+.. |.. . ..+..+.+.+++ + +.|++|++..
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~-L~Di~~~~~g~a~dl~~~~~~~i~~t~d~~~l-~--~aD~Vi~aag~~ 88 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLV-LLDLSEGTKGATMDLEIFNLPNVEISKDLSAS-A--HSKVVIFTVNSL 88 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECCC-----CHHHHHHHTCTTEEEESCGGGG-T--TCSEEEECCCC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEE-EEcCCcchHHHHHHHhhhcCCCeEEeCCHHHH-C--CCCEEEEcCCCC
Confidence 367999998 9999888877777676 655 6555431 111 0 123333566554 3 6899999862
Q ss_pred -------------hhhHHHHHHHHHHcCCcEEEEecC
Q 020101 109 -------------PPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 109 -------------~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.+...++++++.+...+.++++.+
T Consensus 89 ~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s 125 (303)
T 2i6t_A 89 GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS 125 (303)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence 123556777777766666544433
No 359
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.81 E-value=0.16 Score=50.56 Aligned_cols=67 Identities=18% Similarity=0.090 Sum_probs=50.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc---eecCcccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
...+|+|+|+ |.+|+.+++.++..|.+++ .+++..... .-.|.. +.+++++.. ..|+++++++....
T Consensus 273 ~GktV~IiG~-G~IG~~~A~~lka~Ga~Vi-v~d~~~~~~~~A~~~Ga~-~~~l~e~l~--~aDvVi~atgt~~~ 342 (494)
T 3ce6_A 273 GGKKVLICGY-GDVGKGCAEAMKGQGARVS-VTEIDPINALQAMMEGFD-VVTVEEAIG--DADIVVTATGNKDI 342 (494)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCE-ECCHHHHGG--GCSEEEECSSSSCS
T ss_pred CcCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHcCCE-EecHHHHHh--CCCEEEECCCCHHH
Confidence 4567899998 9999999999999999876 777754111 124655 346778776 78999999986654
No 360
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.78 E-value=0.18 Score=49.02 Aligned_cols=79 Identities=24% Similarity=0.272 Sum_probs=53.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-----ecCccccc-C------HHHhhhcCCCCEEEEecCh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-----HLGLPVFN-T------VAEAKAETKANASAIYVPP 109 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-----i~G~p~y~-s------l~dl~~~~~iDlaii~vp~ 109 (331)
..+|+|+|+ |++|+.+.+.|.+.|++++ .|+.+. +. -.|.+++. + ++++.- .+.|++|++++.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vv-vId~d~--~~v~~~~~~g~~vi~GDat~~~~L~~agi-~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMV-VLDHDP--DHIETLRKFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEE-EEECCH--HHHHHHHHTTCCCEESCTTCHHHHHHTTT-TTCSEEEECCSS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCH--HHHHHHHhCCCeEEEcCCCCHHHHHhcCC-CccCEEEECCCC
Confidence 345889999 9999999999999999877 666543 22 24666552 2 333211 268999999987
Q ss_pred hh-HHHHHHHHHHcCCc
Q 020101 110 PF-AAAAILEAMEAELD 125 (331)
Q Consensus 110 ~~-~~~~v~~~~~~Gi~ 125 (331)
+. ...++..+-+.+.+
T Consensus 79 ~~~n~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 79 PQTNLQLTEMVKEHFPH 95 (413)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHhCCC
Confidence 54 34455556666654
No 361
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=90.74 E-value=0.34 Score=46.28 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=57.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCc-ee------------cCcccc-cC------HHHhhhcCCC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGT-EH------------LGLPVF-NT------VAEAKAETKA 100 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~-~i------------~G~p~y-~s------l~dl~~~~~i 100 (331)
..+|+|.|++|.+|+.+++.|.+.| ++++ .++...... .. .++..+ -+ ++.+....++
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLH-VVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEE-EEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 4568899999999999999999999 5776 555432100 00 112211 12 3333333479
Q ss_pred CEEEEecChh--------------------hHHHHHHHHHHcCCcEEEEecCC
Q 020101 101 NASAIYVPPP--------------------FAAAAILEAMEAELDLVVCITEG 133 (331)
Q Consensus 101 Dlaii~vp~~--------------------~~~~~v~~~~~~Gi~~ivi~t~G 133 (331)
|+++-+.... .+..+++.|.+.|++.++.+++.
T Consensus 114 D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~ 166 (399)
T 3nzo_A 114 DYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD 166 (399)
T ss_dssp SEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 9999664310 13357888889999888887874
No 362
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.68 E-value=0.14 Score=46.41 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=46.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCC-ce---ecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGG-TE---HLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g-~~---i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+. +|+|+|+ |.+|+.++..|.+.|. +++ .+|.+... ++ ..+...+.++++..+ +.|++|.+||..
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~-v~nR~~~ka~~la~~~~~~~~~~~~~~~~--~aDiVInatp~g 177 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIW-VVNRTIERAKALDFPVKIFSLDQLDEVVK--KAKSLFNTTSVG 177 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEE-EEESCHHHHHTCCSSCEEEEGGGHHHHHH--TCSEEEECSSTT
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEE-EEeCCHHHHHHHHHHcccCCHHHHHhhhc--CCCEEEECCCCC
Confidence 45 7899999 9999999999999998 455 78876421 11 112224567777666 689999999854
No 363
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=90.66 E-value=0.55 Score=41.26 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=26.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
+|+|.|+++-+|+.+++.|.+.|++++ .++.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~r 33 (257)
T 1fjh_A 3 IIVISGCATGIGAATRKVLEAAGHQIV-GIDI 33 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 477899999999999999999999977 4443
No 364
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=90.58 E-value=1.1 Score=40.80 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=55.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe-CCCCC----------C--cee----cCcccccCHHHhhhcCCCCEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGV-TPKKG----------G--TEH----LGLPVFNTVAEAKAETKANASA 104 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V-nP~~~----------g--~~i----~G~p~y~sl~dl~~~~~iDlai 104 (331)
..+|+|.|++|-+|+.+++.|.+.|+++++.+ ++... + ..+ ..+.-..+++++.+ ++|+++
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEE
Confidence 35688899999999999999999999987544 34310 0 000 11222234555555 689888
Q ss_pred EecCh--------h--h-------HHHHHHHHHHcC-CcEEEEecC
Q 020101 105 IYVPP--------P--F-------AAAAILEAMEAE-LDLVVCITE 132 (331)
Q Consensus 105 i~vp~--------~--~-------~~~~v~~~~~~G-i~~ivi~t~ 132 (331)
-+..+ . . ...+++.|.+.+ ++.+|..++
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS 128 (337)
T 2c29_D 83 HVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSS 128 (337)
T ss_dssp ECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred EeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeee
Confidence 54311 1 1 244667777777 888776665
No 365
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=90.55 E-value=0.54 Score=43.09 Aligned_cols=87 Identities=14% Similarity=0.080 Sum_probs=53.0
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc--CCeEEEEeCCCCCC--c---ee--cCcccc-------cCHHHhhhcCCCCEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY--GTKMVGGVTPKKGG--T---EH--LGLPVF-------NTVAEAKAETKANASAIY 106 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~--g~~iv~~VnP~~~g--~---~i--~G~p~y-------~sl~dl~~~~~iDlaii~ 106 (331)
.+|+|.|++|-+|+.+++.|.+. |+++++.......+ + ++ .++..+ .+++++.+ .+|++|-+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~ 82 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHY 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh--cCCEEEEC
Confidence 57889999999999999998887 88887443321100 0 01 122211 23455555 67999876
Q ss_pred cChh------------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 107 VPPP------------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 107 vp~~------------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.... ....+++.|.+.|+ .+|.+++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS 125 (348)
T 1oc2_A 83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVST 125 (348)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecc
Confidence 5321 14456777888888 4455553
No 366
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=90.33 E-value=0.42 Score=44.09 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=25.5
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc-CCeEEEEe
Q 020101 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGV 73 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~-g~~iv~~V 73 (331)
+|+|.|++|-+|+.+++.|.+. |+++++..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~ 32 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEe
Confidence 5889999999999999998887 78887443
No 367
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=90.26 E-value=0.59 Score=43.28 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=26.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGG 72 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~ 72 (331)
.+|+|.|++|-+|+.+++.|.+.|++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~ 31 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGI 31 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 468899999999999999999999987743
No 368
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=90.19 E-value=0.33 Score=44.97 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=53.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCc---eecCcccc------cCHHHhhhc---CCCCEEEEecC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGT---EHLGLPVF------NTVAEAKAE---TKANASAIYVP 108 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~---~i~G~p~y------~sl~dl~~~---~~iDlaii~vp 108 (331)
..+|+|.|++|-+|+.+++.|.+.| +++++...... .. ...++.+. .+++++.+. .++|++|-+..
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS-GGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC-cchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence 3568899999999999999999999 88774433221 11 11111111 124444431 14899987653
Q ss_pred hh----------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 109 PP----------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 109 ~~----------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
.. ....+++.|.+.|+ .+|.+++
T Consensus 125 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 125 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred ccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 21 13567778888888 4455554
No 369
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=90.18 E-value=0.31 Score=43.82 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=52.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcC-CeEEEEeCCCCCCc---eecCcccc------cCHHHhhhc---CCCCEEEEecChh
Q 020101 44 RVICQGITGKNGTFHTEQAIEYG-TKMVGGVTPKKGGT---EHLGLPVF------NTVAEAKAE---TKANASAIYVPPP 110 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g-~~iv~~VnP~~~g~---~i~G~p~y------~sl~dl~~~---~~iDlaii~vp~~ 110 (331)
+|+|.|++|.+|+.+++.|.+.| +++++...... .. ...++.+. .+++++.+. .++|++|-+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~ 79 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-GGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC-CchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence 37889999999999999999999 78774433221 11 11121111 124444431 1489999765321
Q ss_pred ----------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ----------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ----------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|+ .++.+++
T Consensus 80 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 116 (310)
T 1eq2_A 80 STTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 116 (310)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred cCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 14567778888888 4455554
No 370
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.15 E-value=0.46 Score=43.91 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=47.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCC---Cc--ee-cC------cccc-cCHHHhhhcCCCCEEEEecC
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKG---GT--EH-LG------LPVF-NTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~---g~--~i-~G------~p~y-~sl~dl~~~~~iDlaii~vp 108 (331)
||+|+|+ |.+|..+...+...|+ +++ .+|.+.. +. ++ .+ .++. .+.+++ + +.|++|++++
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~-L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~-~--~aDvVIi~~~ 76 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELV-LVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSEL-A--DAQVVILTAG 76 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGG-T--TCSEEEECC-
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHh-C--CCCEEEEcCC
Confidence 6899999 9999998888887787 665 6665431 00 00 11 1122 233332 2 6899999995
Q ss_pred hhh----------------HHHHHHHHHHcCCcEEEE
Q 020101 109 PPF----------------AAAAILEAMEAELDLVVC 129 (331)
Q Consensus 109 ~~~----------------~~~~v~~~~~~Gi~~ivi 129 (331)
... ..++++++.+...+.+++
T Consensus 77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi 113 (304)
T 2v6b_A 77 ANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLL 113 (304)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEE
Confidence 432 255666666666555443
No 371
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=90.10 E-value=0.4 Score=42.27 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=50.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC-CCCCCceecCcccccCHHHhhhcCCCCEEEEecChh------------
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVGGVT-PKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP------------ 110 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn-P~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~------------ 110 (331)
+|+|.|++|.+|+.+++.|.+ |+++++... +.....-...+.-..+++++.+..++|++|-+....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~ 80 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKA 80 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHH
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHH
Confidence 578999999999999999885 888774332 211000011111122344544422489998765321
Q ss_pred ------hHHHHHHHHHHcCCcEEEEecC
Q 020101 111 ------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 111 ------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
....+++.|.+.|++ ++.+++
T Consensus 81 ~~~n~~~~~~l~~~~~~~~~~-iv~~SS 107 (273)
T 2ggs_A 81 YKINAEAVRHIVRAGKVIDSY-IVHIST 107 (273)
T ss_dssp HHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred HHHhHHHHHHHHHHHHHhCCe-EEEEec
Confidence 235566777777774 454554
No 372
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=90.08 E-value=0.62 Score=42.64 Aligned_cols=91 Identities=11% Similarity=-0.005 Sum_probs=54.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcC-------CeEEEEeC-CCCC----Ccee----cCcccccCHHHhhhcCCCCEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYG-------TKMVGGVT-PKKG----GTEH----LGLPVFNTVAEAKAETKANASA 104 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g-------~~iv~~Vn-P~~~----g~~i----~G~p~y~sl~dl~~~~~iDlai 104 (331)
+.++|+|.|++|-+|+.+++.|.+.| ++++.... +... +..+ ..+.-..+++++.+ .++|++|
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~vi 91 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE-ARPDVIF 91 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH-TCCSEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh-cCCCEEE
Confidence 35678999999999999999999988 67764322 2110 0111 12222234555552 2799999
Q ss_pred EecChh-----------------hHHHHHHHHHHcC-----CcEEEEecC
Q 020101 105 IYVPPP-----------------FAAAAILEAMEAE-----LDLVVCITE 132 (331)
Q Consensus 105 i~vp~~-----------------~~~~~v~~~~~~G-----i~~ivi~t~ 132 (331)
-+.... ....+++.|.+.+ ++.+|.+++
T Consensus 92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS 141 (342)
T 2hrz_A 92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS 141 (342)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc
Confidence 765421 1234566666665 777676654
No 373
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.04 E-value=0.76 Score=43.42 Aligned_cols=118 Identities=13% Similarity=0.099 Sum_probs=66.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCccccc-----------CHHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFN-----------TVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~-----------sl~dl~~~~~iDlaii~vp~ 109 (331)
+..+|+|+|+ |-.|..++++|...|..-+..+|+.....+..+...|- .+.+-..+.++++-+.+.+.
T Consensus 35 ~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 35 RASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence 3567899999 88999999999999985444888765422222222221 12222333355655544443
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCccc
Q 020101 110 PFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIK 164 (331)
Q Consensus 110 ~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~ 164 (331)
.... ...+.. .+...|+..+. +.+....+.+.| +++++.++--.+.|+.-
T Consensus 114 ~~~~-~~~~~~-~~~dvVv~~~d--~~~~r~~ln~~~-~~~~ip~i~~~~~G~~G 163 (346)
T 1y8q_A 114 DIEK-KPESFF-TQFDAVCLTCC--SRDVIVKVDQIC-HKNSIKFFTGDVFGYHG 163 (346)
T ss_dssp CGGG-CCHHHH-TTCSEEEEESC--CHHHHHHHHHHH-HHTTCEEEEEEEEBTEE
T ss_pred ccCc-chHHHh-cCCCEEEEcCC--CHHHHHHHHHHH-HHcCCCEEEEeecccEE
Confidence 2211 122222 36776554332 334444566666 77888877666666543
No 374
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=89.98 E-value=0.89 Score=41.02 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=52.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe--CCCC-C-Cce---e-----------cCcccccCHHHhhhcCCCCEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGV--TPKK-G-GTE---H-----------LGLPVFNTVAEAKAETKANASA 104 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V--nP~~-~-g~~---i-----------~G~p~y~sl~dl~~~~~iDlai 104 (331)
.+|+|.|++|-+|+.+++.|.+.|+++++.+ +|.. . ... . ..+.-..+++++.+ ++|++|
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEE
Confidence 3588999999999999999999999987544 4321 0 000 0 01111224555555 689988
Q ss_pred EecCh---------h--------hHHHHHHHHHHc-CCcEEEEecC
Q 020101 105 IYVPP---------P--------FAAAAILEAMEA-ELDLVVCITE 132 (331)
Q Consensus 105 i~vp~---------~--------~~~~~v~~~~~~-Gi~~ivi~t~ 132 (331)
-+..+ + ....+++.|.+. +++.+|.+++
T Consensus 80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS 125 (322)
T 2p4h_X 80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSS 125 (322)
T ss_dssp ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Confidence 65421 0 122345556666 7888776665
No 375
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.82 E-value=0.17 Score=52.63 Aligned_cols=90 Identities=17% Similarity=0.100 Sum_probs=55.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee--------------cC-------------cccccCHHHhh
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH--------------LG-------------LPVFNTVAEAK 95 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i--------------~G-------------~p~y~sl~dl~ 95 (331)
.+|+|||+ |.||..+...+.+.|++++ .+|++...-+- .| +....++++ .
T Consensus 315 ~kV~VIGa-G~MG~~iA~~la~aG~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~-~ 391 (715)
T 1wdk_A 315 KQAAVLGA-GIMGGGIAYQSASKGTPIL-MKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGD-F 391 (715)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTT-G
T ss_pred CEEEEECC-ChhhHHHHHHHHhCCCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHH-H
Confidence 45889999 9999999999999999877 66765410000 12 122334533 3
Q ss_pred hcCCCCEEEEecChhh--HHHHHHHHHHc-CCcEEEE-ecCCCChh
Q 020101 96 AETKANASAIYVPPPF--AAAAILEAMEA-ELDLVVC-ITEGIPQH 137 (331)
Q Consensus 96 ~~~~iDlaii~vp~~~--~~~~v~~~~~~-Gi~~ivi-~t~G~~e~ 137 (331)
. +.|++|.++|.+. -..++.++.+. .-+.+++ .|++++.+
T Consensus 392 ~--~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~ 435 (715)
T 1wdk_A 392 G--NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS 435 (715)
T ss_dssp G--GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred C--CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH
Confidence 3 6899999999665 33455554332 1233332 45677654
No 376
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.59 E-value=0.61 Score=43.42 Aligned_cols=82 Identities=21% Similarity=0.158 Sum_probs=50.8
Q ss_pred CCeEEEEEcCCCCCCcH-HHHHHHHcCCeEEEEeCCCCCCc-----eecCccccc--CHHHhh-hcCCCCEEEEecChhh
Q 020101 41 KNTRVICQGITGKNGTF-HTEQAIEYGTKMVGGVTPKKGGT-----EHLGLPVFN--TVAEAK-AETKANASAIYVPPPF 111 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~-~~~~l~~~g~~iv~~VnP~~~g~-----~i~G~p~y~--sl~dl~-~~~~iDlaii~vp~~~ 111 (331)
...+|.++|. |..|.. +++.|.+.|+++. +.|-+.... +-.|++++. +.+++. . ++|++|+...-..
T Consensus 3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~-~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~--~~d~vV~Spgi~~ 78 (326)
T 3eag_A 3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVS-GCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEF--KADVYVIGNVAKR 78 (326)
T ss_dssp CCCEEEEESC-CSHHHHHHHHHHHHTTCEEE-EEESSCCTTHHHHHHHTTCEEEESCCGGGGGSC--CCSEEEECTTCCT
T ss_pred CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEE-EEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCC--CCCEEEECCCcCC
Confidence 4567889999 888875 6788889999977 655443101 124777763 344554 3 5898887531112
Q ss_pred HHHHHHHHHHcCCcE
Q 020101 112 AAAAILEAMEAELDL 126 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~~ 126 (331)
.-+.++++.++|++.
T Consensus 79 ~~p~~~~a~~~gi~v 93 (326)
T 3eag_A 79 GMDVVEAILNLGLPY 93 (326)
T ss_dssp TCHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHcCCcE
Confidence 223356666777664
No 377
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=89.47 E-value=0.36 Score=47.26 Aligned_cols=90 Identities=12% Similarity=0.035 Sum_probs=57.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCCCCC----------------------------Cce-e-cCcc-
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPKKG----------------------------GTE-H-LGLP- 86 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP~~~----------------------------g~~-i-~G~p- 86 (331)
+..+|+|.|++|-+|+.+++.|.+. |+++++.+-.... +-+ + ..+.
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 5678999999999999999999887 8998855422110 000 0 1111
Q ss_pred -----cccCHHHhhhcCCCCEEEEecCh--------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 87 -----VFNTVAEAKAETKANASAIYVPP--------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 87 -----~y~sl~dl~~~~~iDlaii~vp~--------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
-..+++++.+ ++|++|-+... .....+++.|.+.+++.++.+++
T Consensus 152 ~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp GGGGCCHHHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred cccCCCHHHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 1123455555 68999866422 23566778888889877777765
No 378
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=89.35 E-value=0.94 Score=40.28 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=25.6
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMV 70 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv 70 (331)
..+|+|.|+++.+|+.+++.|.+.|++++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~ 49 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVA 49 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 34578899999999999999999999976
No 379
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=89.29 E-value=0.7 Score=43.64 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=63.7
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCC--------------Cc---e---------ecC--cccc--cCH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKG--------------GT---E---------HLG--LPVF--NTV 91 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~--------------g~---~---------i~G--~p~y--~sl 91 (331)
+||+|-|. |++|+.+.|.+.+. ++++++.-||..+ |+ + +.| ++++ .+.
T Consensus 2 ~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp 80 (332)
T 3pym_A 2 VRVAINGF-GRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDP 80 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred eEEEEECC-CcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeeccc
Confidence 68899999 99999999987775 6889977667210 10 0 223 3444 246
Q ss_pred HHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEec
Q 020101 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 92 ~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
++++- +.++|+++-++......+-+...++.|.+.+++-+
T Consensus 81 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsa 121 (332)
T 3pym_A 81 ANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITA 121 (332)
T ss_dssp GGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESS
T ss_pred ccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECC
Confidence 66653 24799999999988888888999999999877533
No 380
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.16 E-value=1.7 Score=40.32 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=49.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCC---Cc--ee-cCc------cccc-CHHHhhhcCCCCEEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKG---GT--EH-LGL------PVFN-TVAEAKAETKANASAI 105 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~---g~--~i-~G~------p~y~-sl~dl~~~~~iDlaii 105 (331)
++.||+|||+ |..|....-.+...+. +++ .+|.+.. |. ++ .+. .+.. +.++ .+ +.|++|+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~-L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a-~~--~aDvVii 80 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELV-LIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSD-VK--DCDVIVV 80 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEE-EECCC---CCHHHHHHTTSCCCTTCEEEC--CGGG-GT--TCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHH-hC--CCCEEEE
Confidence 3568999999 9999887777777665 555 6554431 10 00 111 1221 2222 23 7999999
Q ss_pred ecChhh----------------HHHHHHHHHHcCCcEEEEec
Q 020101 106 YVPPPF----------------AAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 106 ~vp~~~----------------~~~~v~~~~~~Gi~~ivi~t 131 (331)
+.+... ..++++++.+...+.+++..
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 887543 45667777776666655543
No 381
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=89.03 E-value=0.59 Score=43.06 Aligned_cols=86 Identities=10% Similarity=-0.005 Sum_probs=52.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC-----CeEEEEeCCCCCCc-eecCccc-------ccCHHHhhhcCC-CCEEEEecC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG-----TKMVGGVTPKKGGT-EHLGLPV-------FNTVAEAKAETK-ANASAIYVP 108 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g-----~~iv~~VnP~~~g~-~i~G~p~-------y~sl~dl~~~~~-iDlaii~vp 108 (331)
++|+|.|++|-+|+.+++.|.+.| +++++.+....... ...++.. ..+++++.+... +|+++-+..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 468899999999999999998888 88775443221100 0012211 123455555222 899987743
Q ss_pred -----h--------hhHHHHHHHHHHc--CCcEEE
Q 020101 109 -----P--------PFAAAAILEAMEA--ELDLVV 128 (331)
Q Consensus 109 -----~--------~~~~~~v~~~~~~--Gi~~iv 128 (331)
+ .....+++.|.+. +++.++
T Consensus 82 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v 116 (364)
T 2v6g_A 82 ANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116 (364)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred CCcchHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence 1 1245566777776 788865
No 382
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=88.97 E-value=1.2 Score=40.58 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=52.3
Q ss_pred EEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCce---ecCcccc--------cCHHHhhhcCCCCEEEEecC---
Q 020101 44 RVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTE---HLGLPVF--------NTVAEAKAETKANASAIYVP--- 108 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~---i~G~p~y--------~sl~dl~~~~~iDlaii~vp--- 108 (331)
+|+|.|++|-+|+.+++.|.+. |+++++.......-.. ..++..+ ..++++.+ ++|++|-+..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih~A~~~~ 79 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIAT 79 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH--HCSEEEECBCCCC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc--CCCEEEEcccccC
Confidence 6889999999999999999987 8998744332110000 0122211 12444554 6899986532
Q ss_pred hh---------------hHHHHHHHHHHcCCcEEEEecC
Q 020101 109 PP---------------FAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 109 ~~---------------~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+. ....+++.|.+.| +.+|.+++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS 117 (345)
T 2bll_A 80 PIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPST 117 (345)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECC
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 11 1345667777888 66666665
No 383
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=88.96 E-value=0.19 Score=49.87 Aligned_cols=66 Identities=14% Similarity=0.009 Sum_probs=49.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc---eecCcccccCHHHhhhcCCCCEEEEecChhh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
...+|+|+|. |++|+.+++.++.+|.+++ .+||..... .-.|+. +.+++++.. ..|++++++....
T Consensus 256 ~GktVgIIG~-G~IG~~vA~~l~~~G~~Vi-v~d~~~~~~~~a~~~g~~-~~~l~ell~--~aDiVi~~~~t~~ 324 (479)
T 1v8b_A 256 SGKIVVICGY-GDVGKGCASSMKGLGARVY-ITEIDPICAIQAVMEGFN-VVTLDEIVD--KGDFFITCTGNVD 324 (479)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSCHHHHHHHHTTTCE-ECCHHHHTT--TCSEEEECCSSSS
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCcCEEE-EEeCChhhHHHHHHcCCE-ecCHHHHHh--cCCEEEECCChhh
Confidence 3456889998 9999999999999999977 778765210 123553 357999887 7999999974433
No 384
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=88.93 E-value=0.5 Score=42.29 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=38.7
Q ss_pred CHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC---C--CCCEEEEEeCCCC
Q 020101 222 NFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG---T--EKPIVAFIAGLTA 275 (331)
Q Consensus 222 ~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r---~--~KPVvv~k~Grs~ 275 (331)
.+.+.|+.+.+||++|+|++.+.+.|-......++.++++ . .||||++-.|...
T Consensus 33 ~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a~ 91 (240)
T 3rst_A 33 TFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAA 91 (240)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEEECCBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCeeh
Confidence 3556677788899999999999986654555555444443 3 8999998777554
No 385
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=88.90 E-value=0.14 Score=48.92 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=59.3
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCC----------CC-------------Cc--eecC--ccccc--C
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK----------KG-------------GT--EHLG--LPVFN--T 90 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~----------~~-------------g~--~i~G--~p~y~--s 90 (331)
+..++|+|.|+ |++|+.+++.+.+.++++++.-||. ++ ++ .+.| ++++. +
T Consensus 19 ~~~~kVaInGf-GrIGr~vlr~l~e~~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~d 97 (356)
T 3hja_A 19 PGSMKLAINGF-GRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERD 97 (356)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred CCCeEEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 55789999999 9999999999888789988655553 00 00 1233 23443 3
Q ss_pred HHHhhh-cCCCCEEEEecChhhH----HHHHHHHHH-cCCcEEEEecC
Q 020101 91 VAEAKA-ETKANASAIYVPPPFA----AAAILEAME-AELDLVVCITE 132 (331)
Q Consensus 91 l~dl~~-~~~iDlaii~vp~~~~----~~~v~~~~~-~Gi~~ivi~t~ 132 (331)
.++++- +.++|+++.++..... .+-+...++ .|.+.++|-.+
T Consensus 98 p~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsap 145 (356)
T 3hja_A 98 PKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVP 145 (356)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSC
T ss_pred hhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCC
Confidence 554432 2378999988876655 556666777 88887665444
No 386
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=88.81 E-value=1.1 Score=40.74 Aligned_cols=89 Identities=10% Similarity=0.022 Sum_probs=52.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcC--CeEEEEeCCCCCC--cee------cCcccc-------cCHHHhhhcCCCCEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKKGG--TEH------LGLPVF-------NTVAEAKAETKANASA 104 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g--~~iv~~VnP~~~g--~~i------~G~p~y-------~sl~dl~~~~~iDlai 104 (331)
.++|+|.|++|-+|+.+++.|.+.| +++++.......+ +.. .++..+ .+++++.. ++|++|
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 80 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR--KVDGVV 80 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence 3568999999999999999998875 8877443211000 110 011111 23445554 789998
Q ss_pred EecChh------------------hHHHHHHHHHHcCC-cEEEEecC
Q 020101 105 IYVPPP------------------FAAAAILEAMEAEL-DLVVCITE 132 (331)
Q Consensus 105 i~vp~~------------------~~~~~v~~~~~~Gi-~~ivi~t~ 132 (331)
-+.... ....+++.|.+.+. +.+|.+++
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 765321 13456677777765 56665554
No 387
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=88.65 E-value=0.83 Score=41.93 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=28.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V 73 (331)
+..+|+|.|++|-+|+.+++.|.+.|+++++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 58 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVD 58 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEe
Confidence 456799999999999999999999999987443
No 388
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=88.58 E-value=0.68 Score=40.21 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=25.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCCeEEE
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGTKMVG 71 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~~iv~ 71 (331)
+|+|.|++|-+|+.+++.|.+.|++++.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~ 30 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIG 30 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEE
Confidence 5788999999999999999999999773
No 389
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=88.55 E-value=1.1 Score=41.93 Aligned_cols=88 Identities=10% Similarity=0.008 Sum_probs=54.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-------eEEEEeCCC----CC---C------c----eecCcccccCHHHhhh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-------KMVGGVTPK----KG---G------T----EHLGLPVFNTVAEAKA 96 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-------~iv~~VnP~----~~---g------~----~i~G~p~y~sl~dl~~ 96 (331)
++.||+|+|++|..|+.+...|...+. +++ .+|.. .. | + ....+....++.+..+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~-l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQ-LLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEE-EEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 457899999999999988887776664 555 67655 10 0 0 0111222345666555
Q ss_pred cCCCCEEEEecCh----------------hhHHHHHHHHHHcC-CcE-EEEec
Q 020101 97 ETKANASAIYVPP----------------PFAAAAILEAMEAE-LDL-VVCIT 131 (331)
Q Consensus 97 ~~~iDlaii~vp~----------------~~~~~~v~~~~~~G-i~~-ivi~t 131 (331)
+.|+++++... ....++++.+.+.+ .+. ++++|
T Consensus 83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 78999977531 12456778888884 774 34444
No 390
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=88.44 E-value=1.8 Score=38.49 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=29.4
Q ss_pred cccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeC
Q 020101 36 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVT 74 (331)
Q Consensus 36 ~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~Vn 74 (331)
.++.-+..+|+|.|+++.+|+.+.+.|.+.|++++ .++
T Consensus 28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~-~~~ 65 (279)
T 3ctm_A 28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVA-IWY 65 (279)
T ss_dssp GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEE-EEE
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 33333456688899999999999999999999977 444
No 391
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=88.41 E-value=1.1 Score=41.80 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=27.0
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGG 72 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~ 72 (331)
.+..+|+|.|++|-+|+.+++.|.+.|+++++.
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~ 41 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIV 41 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEE
Confidence 456789999999999999999999999998743
No 392
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=88.29 E-value=2 Score=37.86 Aligned_cols=34 Identities=9% Similarity=0.100 Sum_probs=27.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
+..+|+|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~r 51 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVT-ICAR 51 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 345678899999999999999999999976 4443
No 393
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.10 E-value=0.56 Score=44.12 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=52.4
Q ss_pred cccCCCCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCC---Cc--ee-c------CcccccCHHHhhhcCCCC
Q 020101 36 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKG---GT--EH-L------GLPVFNTVAEAKAETKAN 101 (331)
Q Consensus 36 ~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~---g~--~i-~------G~p~y~sl~dl~~~~~iD 101 (331)
++|+.+..||+|+|+ |.+|+.++..+...+. +++ .+|.... |. ++ . ...++.+..+... +.|
T Consensus 3 ~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~-l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~--~aD 78 (326)
T 3vku_A 3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIG-IVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAK--DAD 78 (326)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGT--TCS
T ss_pred ccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhc--CCC
Confidence 567667789999998 9999999888877765 555 7776431 00 01 1 2223333223333 689
Q ss_pred EEEEecChhh----------------HHHHHHHHHHcCCcEEEEe
Q 020101 102 ASAIYVPPPF----------------AAAAILEAMEAELDLVVCI 130 (331)
Q Consensus 102 laii~vp~~~----------------~~~~v~~~~~~Gi~~ivi~ 130 (331)
++|++..... ..++++.+.+...+.+++.
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilv 123 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV 123 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHHHHTTTCCSEEEE
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 9998864221 3455666666666654443
No 394
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.94 E-value=0.4 Score=49.93 Aligned_cols=91 Identities=12% Similarity=-0.037 Sum_probs=54.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCce-e-------------cC-------------cccccCHHHhh
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE-H-------------LG-------------LPVFNTVAEAK 95 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~-i-------------~G-------------~p~y~sl~dl~ 95 (331)
.+|+|||+ |.||..+...+.+.|++++ .+|.+...-+ . .| +....++++ .
T Consensus 313 ~kV~VIGa-G~MG~~iA~~la~aG~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~-~ 389 (725)
T 2wtb_A 313 KKVAIIGG-GLMGSGIATALILSNYPVI-LKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYES-F 389 (725)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCCEE-EECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGG-G
T ss_pred cEEEEEcC-CHhhHHHHHHHHhCCCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHH-H
Confidence 46899999 9999999999999999876 6665431000 0 11 122334543 3
Q ss_pred hcCCCCEEEEecChhhH--HHHHHHHHHc-CCcEEE-EecCCCChhH
Q 020101 96 AETKANASAIYVPPPFA--AAAILEAMEA-ELDLVV-CITEGIPQHD 138 (331)
Q Consensus 96 ~~~~iDlaii~vp~~~~--~~~v~~~~~~-Gi~~iv-i~t~G~~e~~ 138 (331)
. +.|++|.++|.+.. ..++.+..+. .-+.++ .-|++++.++
T Consensus 390 ~--~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~ 434 (725)
T 2wtb_A 390 R--DVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNK 434 (725)
T ss_dssp T--TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH
T ss_pred C--CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHH
Confidence 3 68999999998763 3444444332 222333 2356776543
No 395
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.76 E-value=0.7 Score=45.04 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=51.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC--Cc-----eecCccccc--CHHHhhhcCC-CCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG--GT-----EHLGLPVFN--TVAEAKAETK-ANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~--g~-----~i~G~p~y~--sl~dl~~~~~-iDlaii~vp~~ 110 (331)
+..+|.|+|. |..|...++.|.+.|+++. +.|.+.. .. +-.|++++. .-+++.+ + +|++|+...-.
T Consensus 8 ~~k~v~viG~-G~sG~s~A~~l~~~G~~V~-~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~--~~~d~vv~spgi~ 83 (451)
T 3lk7_A 8 ENKKVLVLGL-ARSGEAAARLLAKLGAIVT-VNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLD--EDFCYMIKNPGIP 83 (451)
T ss_dssp TTCEEEEECC-TTTHHHHHHHHHHTTCEEE-EEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGG--SCEEEEEECTTSC
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCEEE-EEeCCcccCChHHHHHHhCCCEEEECCChHHhhc--CCCCEEEECCcCC
Confidence 3567889999 9999988999999999977 6555321 00 124777663 2233433 4 79888763222
Q ss_pred hHHHHHHHHHHcCCcE
Q 020101 111 FAAAAILEAMEAELDL 126 (331)
Q Consensus 111 ~~~~~v~~~~~~Gi~~ 126 (331)
..-+.+.++.++|++.
T Consensus 84 ~~~p~~~~a~~~gi~v 99 (451)
T 3lk7_A 84 YNNPMVKKALEKQIPV 99 (451)
T ss_dssp TTSHHHHHHHHTTCCE
T ss_pred CCChhHHHHHHCCCcE
Confidence 2223467777777664
No 396
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.50 E-value=0.6 Score=40.84 Aligned_cols=83 Identities=11% Similarity=0.084 Sum_probs=52.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee----cCccccc----CHHHhhhc--CCCCEEEEecChhh
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----LGLPVFN----TVAEAKAE--TKANASAIYVPPPF 111 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i----~G~p~y~----sl~dl~~~--~~iDlaii~vp~~~ 111 (331)
..+|+|+|+ |+.|+.+++.|.+.|+ ++ .++.+. +.. .|+.++. +.+.+.+. .+.|++++++|.+.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~-vid~~~--~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FV-LAEDEN--VRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EE-EESCGG--GHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EE-EEECCH--HHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 346889999 9999999999988888 66 777654 211 3444332 22222111 26899999998764
Q ss_pred H-HHHHHHHHHcCCc-EEEE
Q 020101 112 A-AAAILEAMEAELD-LVVC 129 (331)
Q Consensus 112 ~-~~~v~~~~~~Gi~-~ivi 129 (331)
. ..++..+-+.+.+ .++.
T Consensus 84 ~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 84 ETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEE
Confidence 3 4445666667776 5443
No 397
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=87.48 E-value=0.58 Score=41.39 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=41.7
Q ss_pred HHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 020101 224 VDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTA 275 (331)
Q Consensus 224 ~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvv~k~Grs~ 275 (331)
.+.|+++.+|+..+.|.+|+.+.|-....+....++++ .+|||+++..|...
T Consensus 63 ~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~~~~~pV~t~v~G~Aa 115 (218)
T 1y7o_A 63 IAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAA 115 (218)
T ss_dssp HHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEccEeH
Confidence 34566778899999999999987655777888888777 77999999977644
No 398
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.43 E-value=0.63 Score=44.09 Aligned_cols=82 Identities=15% Similarity=0.012 Sum_probs=50.7
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCCCceec--------------CcccccCHHHhhhcCCCCEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEHL--------------GLPVFNTVAEAKAETKANAS 103 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~g~~i~--------------G~p~y~sl~dl~~~~~iDla 103 (331)
.+..||+|+|++|..|..++..+...|. +++ .+|... +... .+....+..+..+ +.|++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evv-LiDi~~--~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~--dADvV 80 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLC-LYDPFA--VGLEGVAEEIRHCGFEGLNLTFTSDIKEALT--DAKYI 80 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEE-EECSCH--HHHHHHHHHHHHHCCTTCCCEEESCHHHHHT--TEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEE-EEeCCc--hhHHHHHHhhhhCcCCCCceEEcCCHHHHhC--CCCEE
Confidence 3457899999989999988877777774 565 777653 1111 1111235655454 68999
Q ss_pred EEecCh----------------hhHHHHHHHHHHcCCcE
Q 020101 104 AIYVPP----------------PFAAAAILEAMEAELDL 126 (331)
Q Consensus 104 ii~vp~----------------~~~~~~v~~~~~~Gi~~ 126 (331)
|++... ....++++.+.+.+.+.
T Consensus 81 vitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a 119 (343)
T 3fi9_A 81 VSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDC 119 (343)
T ss_dssp EECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 987521 22344556666666665
No 399
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=87.35 E-value=0.55 Score=43.85 Aligned_cols=80 Identities=13% Similarity=0.174 Sum_probs=54.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHH-cCCeEEEEeCCCCCCc-e----e----cCcccccCHHHhhhcCCCCEEEEecCh
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKGGT-E----H----LGLPVFNTVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~-~g~~iv~~VnP~~~g~-~----i----~G~p~y~sl~dl~~~~~iDlaii~vp~ 109 (331)
++..+++|||+ |.+|+.+++.+.+ .+.+.+...|+..... + . ..+. +.+++++. +.|+++.+||.
T Consensus 123 ~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v---~aDvVi~aTp~ 197 (322)
T 1omo_A 123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS---RCDVLVTTTPS 197 (322)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT---SSSEEEECCCC
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh---CCCEEEEeeCC
Confidence 45678999999 9999999998877 4666566888764211 1 1 1234 77888876 38999999997
Q ss_pred hhHHHHH-HHHHHcCCcE
Q 020101 110 PFAAAAI-LEAMEAELDL 126 (331)
Q Consensus 110 ~~~~~~v-~~~~~~Gi~~ 126 (331)
.. .++ .++++.|.+.
T Consensus 198 ~~--pv~~~~~l~~G~~V 213 (322)
T 1omo_A 198 RK--PVVKAEWVEEGTHI 213 (322)
T ss_dssp SS--CCBCGGGCCTTCEE
T ss_pred CC--ceecHHHcCCCeEE
Confidence 53 223 3455666554
No 400
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.01 E-value=0.27 Score=45.18 Aligned_cols=69 Identities=6% Similarity=0.057 Sum_probs=43.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCC-ce-ecCcc--cccCHHHhhhcCCCCEEEEecChhhHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGG-TE-HLGLP--VFNTVAEAKAETKANASAIYVPPPFAA 113 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g-~~-i~G~p--~y~sl~dl~~~~~iDlaii~vp~~~~~ 113 (331)
+..+++|+|+ |.+|+.++..|.+.|+ +++ .+|.+... ++ ...+. .+.++++... +.|++|-+||.....
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~-v~~R~~~~a~~la~~~~~~~~~~~~~~~~--~aDiVInaTp~Gm~~ 189 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLT-VANRTMSRFNNWSLNINKINLSHAESHLD--EFDIIINTTPAGMNG 189 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCE-EECSCGGGGTTCCSCCEEECHHHHHHTGG--GCSEEEECCC-----
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEE-EEeCCHHHHHHHHHhcccccHhhHHHHhc--CCCEEEECccCCCCC
Confidence 4556889999 8899999999999998 555 78876521 11 11222 2344555444 689999999976543
No 401
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=86.99 E-value=2 Score=37.41 Aligned_cols=82 Identities=15% Similarity=0.092 Sum_probs=47.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCC-C-EEEEecChhhHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKA-N-ASAIYVPPPFAAAAILE 118 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~i-D-laii~vp~~~~~~~v~~ 118 (331)
+..+|+|.|+++.+|+.+++.|.+.|++++ .++.+. +... ...+++.. ++ . +..+.+.++.+.+.+++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~-~~~r~~--~~~~-----~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~ 79 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLI-LIDREA--AALD-----RAAQELGA--AVAARIVADVTDAEAMTAAAAE 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHHH-----HHHHHHGG--GEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH-----HHHHHhcc--cceeEEEEecCCHHHHHHHHHH
Confidence 345688899999999999999999999977 554432 1100 00112211 11 1 11234455666666665
Q ss_pred HHHc-CCcEEEEecCC
Q 020101 119 AMEA-ELDLVVCITEG 133 (331)
Q Consensus 119 ~~~~-Gi~~ivi~t~G 133 (331)
+.+. ++..+|. ..|
T Consensus 80 ~~~~~~id~li~-~Ag 94 (254)
T 2wsb_A 80 AEAVAPVSILVN-SAG 94 (254)
T ss_dssp HHHHSCCCEEEE-CCC
T ss_pred HHhhCCCcEEEE-CCc
Confidence 5543 5777554 444
No 402
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.78 E-value=1.5 Score=39.19 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=27.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
+...|+|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~-~~~r 64 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVV-GCAR 64 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEEC
Confidence 345678899999999999999999999977 4443
No 403
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=86.72 E-value=0.5 Score=47.04 Aligned_cols=65 Identities=14% Similarity=0.016 Sum_probs=48.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc---eecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
...+|+|+|. |++|+.+++.++.+|.+++ .+||..... ...|.. +.+++++.. ..|++++++...
T Consensus 276 ~GktVgIIG~-G~IG~~vA~~l~~~G~~V~-v~d~~~~~~~~a~~~G~~-~~~l~ell~--~aDiVi~~~~t~ 343 (494)
T 3d64_A 276 AGKIAVVAGY-GDVGKGCAQSLRGLGATVW-VTEIDPICALQAAMEGYR-VVTMEYAAD--KADIFVTATGNY 343 (494)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEE-EECSCHHHHHHHHTTTCE-ECCHHHHTT--TCSEEEECSSSS
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHHCCCEEE-EEeCChHhHHHHHHcCCE-eCCHHHHHh--cCCEEEECCCcc
Confidence 3456889998 9999999999999999977 777764200 113554 347999887 799999998543
No 404
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.70 E-value=2.4 Score=41.81 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=49.5
Q ss_pred cCCCCeEEEEEcCCCCCCcH-HHHHHHHcCCeEEEEeCCCCCCc----eecCccccc--CHHHhhhcCCCCEEEEec--C
Q 020101 38 FVDKNTRVICQGITGKNGTF-HTEQAIEYGTKMVGGVTPKKGGT----EHLGLPVFN--TVAEAKAETKANASAIYV--P 108 (331)
Q Consensus 38 l~~k~~~VaIvGasgk~G~~-~~~~l~~~g~~iv~~VnP~~~g~----~i~G~p~y~--sl~dl~~~~~iDlaii~v--p 108 (331)
+..+..+|.|+|. |..|.. +++.|.+.|+++. +.|.+.... +-.|++++. +.+.+ . ++|++|+.. |
T Consensus 18 ~~~~~~~v~viGi-G~sG~s~~A~~l~~~G~~V~-~~D~~~~~~~~~l~~~gi~~~~g~~~~~~-~--~~d~vV~Spgi~ 92 (494)
T 4hv4_A 18 EMRRVRHIHFVGI-GGAGMGGIAEVLANEGYQIS-GSDLAPNSVTQHLTALGAQIYFHHRPENV-L--DASVVVVSTAIS 92 (494)
T ss_dssp ----CCEEEEETT-TSTTHHHHHHHHHHTTCEEE-EECSSCCHHHHHHHHTTCEEESSCCGGGG-T--TCSEEEECTTSC
T ss_pred hhccCCEEEEEEE-cHhhHHHHHHHHHhCCCeEE-EEECCCCHHHHHHHHCCCEEECCCCHHHc-C--CCCEEEECCCCC
Confidence 3345578999999 889985 6899999999987 777554200 124777664 23333 2 589988763 3
Q ss_pred hhhHHHHHHHHHHcCCc
Q 020101 109 PPFAAAAILEAMEAELD 125 (331)
Q Consensus 109 ~~~~~~~v~~~~~~Gi~ 125 (331)
++ . +.+.++.++|++
T Consensus 93 ~~-~-p~~~~a~~~gi~ 107 (494)
T 4hv4_A 93 AD-N-PEIVAAREARIP 107 (494)
T ss_dssp TT-C-HHHHHHHHTTCC
T ss_pred CC-C-HHHHHHHHCCCC
Confidence 32 2 335556666655
No 405
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=86.39 E-value=1.3 Score=41.88 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=28.6
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
+..+|+|+|+ |..|..++++|...|..-+..||+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 3567899999 88999999999998875344777754
No 406
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.20 E-value=2.3 Score=37.58 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=53.8
Q ss_pred cccccCCCCeEEEEEcCCC-CCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE---EEecCh
Q 020101 34 APAVFVDKNTRVICQGITG-KNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPP 109 (331)
Q Consensus 34 l~~ll~~k~~~VaIvGasg-k~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla---ii~vp~ 109 (331)
+...+.-+...|+|.|++| .+|+.+++.|.+.|++++ .++.+. +.. -...+++.+....++. .+.+.+
T Consensus 14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~~~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVV-ISDYHE--RRL-----GETRDQLADLGLGRVEAVVCDVTST 85 (266)
T ss_dssp CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHTTCSSCEEEEECCTTCH
T ss_pred cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEE-EecCCH--HHH-----HHHHHHHHhcCCCceEEEEeCCCCH
Confidence 3334333456688899987 599999999999999977 554432 110 0112222211112222 244566
Q ss_pred hhHHHHHHHHHHc--CCcEEEEecCCC
Q 020101 110 PFAAAAILEAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 110 ~~~~~~v~~~~~~--Gi~~ivi~t~G~ 134 (331)
+.+.++++++.+. ++..+|+ ..|+
T Consensus 86 ~~v~~~~~~~~~~~g~id~li~-~Ag~ 111 (266)
T 3o38_A 86 EAVDALITQTVEKAGRLDVLVN-NAGL 111 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEE-CCCc
Confidence 7777777777665 5887554 5554
No 407
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=86.09 E-value=0.78 Score=40.17 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=47.9
Q ss_pred EEecCCCCCCCCC---HHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 020101 210 CVGIGGDPFNGTN---FVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTA 275 (331)
Q Consensus 210 ~vs~Gn~~~~~v~---~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvv~k~Grs~ 275 (331)
+|-+++.. .+.+ +.+.|.++..|+..+.|.+|+.+.|-....+.+..++++ .+|||+++..|...
T Consensus 29 ii~l~G~I-~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~~~~~pV~~~v~g~Aa 97 (208)
T 2cby_A 29 IIFLGSEV-NDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAA 97 (208)
T ss_dssp EEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHCSSCEEEEEEEEEE
T ss_pred EEEEcCEE-CHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEEECcEeH
Confidence 46667664 1223 344455668889999999999998766788888888887 77999999877544
No 408
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=85.99 E-value=0.51 Score=45.06 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=27.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V 73 (331)
..+|+|.|++|-+|+.+++.|.+.|+++++.+
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~ 100 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFI 100 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEE
Confidence 45789999999999999999988888887543
No 409
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=85.88 E-value=0.68 Score=45.37 Aligned_cols=98 Identities=14% Similarity=0.075 Sum_probs=60.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc---eecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---EHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~---~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~ 117 (331)
...+|+|+|. |++|+.+++.++..|.+++ .+||..... ...|.. +.+++++.. ..|+++.++........ +
T Consensus 210 ~GktVgIiG~-G~IG~~vA~~Lka~Ga~Vi-v~D~~p~~a~~A~~~G~~-~~sL~eal~--~ADVVilt~gt~~iI~~-e 283 (436)
T 3h9u_A 210 AGKTACVCGY-GDVGKGCAAALRGFGARVV-VTEVDPINALQAAMEGYQ-VLLVEDVVE--EAHIFVTTTGNDDIITS-E 283 (436)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHHTTCE-ECCHHHHTT--TCSEEEECSSCSCSBCT-T
T ss_pred cCCEEEEEee-CHHHHHHHHHHHHCCCEEE-EECCChhhhHHHHHhCCe-ecCHHHHHh--hCCEEEECCCCcCccCH-H
Confidence 3567899999 9999999999999999976 677653101 124543 448999987 79999987654333220 1
Q ss_pred HHHHcCCcEEEE-ecCCCChhHHHHHHH
Q 020101 118 EAMEAELDLVVC-ITEGIPQHDMVRVKA 144 (331)
Q Consensus 118 ~~~~~Gi~~ivi-~t~G~~e~~~~~l~~ 144 (331)
......-..+++ .+.|-.|-+...|.+
T Consensus 284 ~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 284 HFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp TGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred HHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 122223334333 333433445555554
No 410
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.82 E-value=1.1 Score=41.59 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=25.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKK 77 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~ 77 (331)
+..||+|||+ |.+|..++..+...+. +++ .+|.+.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~-l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIV-LIDANE 41 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSH
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEE-EEeCCc
Confidence 4568999999 9999988877766554 555 766653
No 411
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=85.80 E-value=0.62 Score=42.80 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=30.6
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
.-+..+|+|||+ |+.|..-++.|.+.|.+++ .|+|..
T Consensus 10 ~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~Vt-Viap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLT-LVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEE-EEEEEE
T ss_pred EcCCCEEEEECC-cHHHHHHHHHHHhCCCEEE-EEcCCC
Confidence 456788999999 8888888899999999876 777754
No 412
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=85.66 E-value=2 Score=37.71 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=25.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMV 70 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv 70 (331)
..+|+|.|+++.+|+.+.+.|.+.|++++
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~ 43 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVA 43 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 34578889999999999999999999976
No 413
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=85.55 E-value=1.8 Score=38.14 Aligned_cols=72 Identities=10% Similarity=0.054 Sum_probs=46.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHHHc
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEA 122 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~~~ 122 (331)
.+|+|.|+++.+|+.+++.|.+.|++++ .++.+.. .... ....+| .+..+.+.+.++++.+.
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G~~V~-~~~r~~~--~~~~-----------~~~~~d----~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKSWNTI-SIDFREN--PNAD-----------HSFTIK----DSGEEEIKSVIEKINSK 84 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESSCC--TTSS-----------EEEECS----CSSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCcc--cccc-----------cceEEE----eCCHHHHHHHHHHHHHH
Confidence 4578899999999999999999999976 5444331 1000 001234 55667777777777664
Q ss_pred --CCcEEEEecCC
Q 020101 123 --ELDLVVCITEG 133 (331)
Q Consensus 123 --Gi~~ivi~t~G 133 (331)
++..+| ...|
T Consensus 85 ~g~iD~li-~~Ag 96 (251)
T 3orf_A 85 SIKVDTFV-CAAG 96 (251)
T ss_dssp TCCEEEEE-ECCC
T ss_pred cCCCCEEE-ECCc
Confidence 366644 4555
No 414
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=85.52 E-value=2 Score=37.06 Aligned_cols=78 Identities=19% Similarity=0.095 Sum_probs=46.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcC-CCCE-EEEecChhhHHHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAET-KANA-SAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~-~iDl-aii~vp~~~~~~~v~~~~ 120 (331)
.+|+|.|+++.+|+.+.+.|.+.|++++ .++.+. +. ++++.++. ++.. ..+.+..+.+.+.++++.
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~-~~~r~~--~~---------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVG-LMARDE--KR---------LQALAAELEGALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEE-EEESCH--HH---------HHHHHHHSTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEE-EEECCH--HH---------HHHHHHHhhhceEEEecCCCHHHHHHHHHHHH
Confidence 4578899999999999999999999977 444332 11 12221110 1222 224455566666666665
Q ss_pred Hc--CCcEEEEecCC
Q 020101 121 EA--ELDLVVCITEG 133 (331)
Q Consensus 121 ~~--Gi~~ivi~t~G 133 (331)
+. ++..++. ..|
T Consensus 74 ~~~~~id~li~-~Ag 87 (234)
T 2ehd_A 74 EAFGELSALVN-NAG 87 (234)
T ss_dssp HHHSCCCEEEE-CCC
T ss_pred HHcCCCCEEEE-CCC
Confidence 43 5777554 444
No 415
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=85.48 E-value=1.2 Score=44.09 Aligned_cols=109 Identities=6% Similarity=-0.013 Sum_probs=65.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEE-------eCCCCCCc-ee-----------cCccccc---------CHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKGGT-EH-----------LGLPVFN---------TVA 92 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~-------VnP~~~g~-~i-----------~G~p~y~---------sl~ 92 (331)
+..+|+|.|. |+.|+..++.|.+.|.++++. +||+..-. ++ ..+.-|. +-+
T Consensus 251 ~g~~vaVqG~-GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~ 329 (470)
T 2bma_A 251 EKQTAVVSGS-GNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNE 329 (470)
T ss_dssp GGCEEEEECS-SHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCc
Confidence 4577899998 999999999999999998854 45654200 11 0112121 112
Q ss_pred HhhhcCCCCEEEEec-ChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 93 EAKAETKANASAIYV-PPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 93 dl~~~~~iDlaii~v-p~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
++. +.++|+++=|. +.....+.++.+++.+++.|+=.+-+....+..++ . +++|+.++
T Consensus 330 ~~~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~---L-~~rGIl~~ 388 (470)
T 2bma_A 330 KPW-GVPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINL---F-KSNNIIYC 388 (470)
T ss_dssp CTT-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHH---H-HHTTCEEE
T ss_pred Cee-ecCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHH---H-HHCCcEEE
Confidence 333 24789999655 44556777888888899975533333322222222 2 46676554
No 416
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=85.47 E-value=0.36 Score=46.17 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=52.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee------cCcccccCHHHhhhcCCCCEEEEecChhhHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------LGLPVFNTVAEAKAETKANASAIYVPPPFAAA 114 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i------~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~ 114 (331)
+..+|+|+|+ |++|+..++.+.+.|.+++ ..|+.. +.+ .|... -+.+++.. .+.|+++.+......-.
T Consensus 172 ~GktV~V~G~-G~VG~~~A~~L~~~GakVv-v~D~~~--~~l~~~a~~~ga~~-v~~~~ll~-~~~DIvip~a~~~~I~~ 245 (364)
T 1leh_A 172 EGLAVSVQGL-GNVAKALCKKLNTEGAKLV-VTDVNK--AAVSAAVAEEGADA-VAPNAIYG-VTCDIFAPCALGAVLND 245 (364)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCH--HHHHHHHHHHCCEE-CCGGGTTT-CCCSEEEECSCSCCBST
T ss_pred CcCEEEEECc-hHHHHHHHHHHHHCCCEEE-EEcCCH--HHHHHHHHHcCCEE-EChHHHhc-cCCcEeeccchHHHhCH
Confidence 4567889999 9999999999999999987 778764 221 13322 24455543 36899987754332211
Q ss_pred HHHHHHHcCCcEEEEec
Q 020101 115 AILEAMEAELDLVVCIT 131 (331)
Q Consensus 115 ~v~~~~~~Gi~~ivi~t 131 (331)
+.+-..|.+.|+..+
T Consensus 246 --~~~~~lg~~iV~e~A 260 (364)
T 1leh_A 246 --FTIPQLKAKVIAGSA 260 (364)
T ss_dssp --THHHHCCCSEECCSC
T ss_pred --HHHHhCCCcEEEeCC
Confidence 123334777644333
No 417
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=85.17 E-value=1 Score=42.65 Aligned_cols=89 Identities=15% Similarity=0.099 Sum_probs=61.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCC------------------CCce----------ecC--cccc--
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK------------------GGTE----------HLG--LPVF-- 88 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~------------------~g~~----------i~G--~p~y-- 88 (331)
.+||+|-|. |++|+.++|.+.+. .+++++.-||.. .|.+ +.| ++++
T Consensus 3 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEECC-ChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 478999999 99999999987775 578887666721 1101 112 2343
Q ss_pred cCHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEec
Q 020101 89 NTVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 89 ~sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
.+.++++- +.++|+++-++......+-+...++.|.+.+++-.
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsa 125 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISA 125 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESS
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECC
Confidence 24555432 23789999999888888888888999998866533
No 418
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.08 E-value=0.42 Score=45.62 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=29.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
+..+|+|+|+ |.+|+..++.+...|.+++ .+|++.
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~-~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVT-VLDINI 201 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEE-EEeCCH
Confidence 3467899999 9999999999999999866 677654
No 419
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=85.05 E-value=0.77 Score=40.98 Aligned_cols=84 Identities=13% Similarity=0.161 Sum_probs=52.0
Q ss_pred cccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCC-EEEEecChhhH
Q 020101 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFA 112 (331)
Q Consensus 34 l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iD-laii~vp~~~~ 112 (331)
..+++..+...|+|.|+++-+|+.+++.|.+.|++++ .++.+. +..... .+. +..+.+-++.+
T Consensus 20 ~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~~~~-------------~~~~~~~Dv~d~~~v 83 (260)
T 3un1_A 20 FQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVV-ATSRSI--KPSADP-------------DIHTVAGDISKPETA 83 (260)
T ss_dssp CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEESSC--CCCSST-------------TEEEEESCTTSHHHH
T ss_pred hhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCh--hhcccC-------------ceEEEEccCCCHHHH
Confidence 4445544556678889999999999999999999977 444332 111000 111 12234566777
Q ss_pred HHHHHHHHHc--CCcEEEEecCCC
Q 020101 113 AAAILEAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 113 ~~~v~~~~~~--Gi~~ivi~t~G~ 134 (331)
.+.++++.+. ++..+++ ..|.
T Consensus 84 ~~~~~~~~~~~g~iD~lv~-nAg~ 106 (260)
T 3un1_A 84 DRIVREGIERFGRIDSLVN-NAGV 106 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHHHHHHCCCCCEEEE-CCCC
Confidence 7777776665 6887664 4443
No 420
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.93 E-value=0.7 Score=45.39 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=47.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-c---eecCcc------cccC-HHHhhhcCCCCEEEEecCh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-T---EHLGLP------VFNT-VAEAKAETKANASAIYVPP 109 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~---~i~G~p------~y~s-l~dl~~~~~iDlaii~vp~ 109 (331)
..++|+|+|+ |+.|+.+++.|.+.|++++ .||.+... + +..+++ +.++ |+++-- .+.|++|.+|+.
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~-vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~~ 78 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDIT-IVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTNT 78 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEE-EEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCSC
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcCC
Confidence 3578999999 9999999999988898877 77765410 0 112333 3322 444432 368999988887
Q ss_pred hhH
Q 020101 110 PFA 112 (331)
Q Consensus 110 ~~~ 112 (331)
+.+
T Consensus 79 De~ 81 (461)
T 4g65_A 79 DET 81 (461)
T ss_dssp HHH
T ss_pred hHH
Confidence 654
No 421
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=84.85 E-value=0.97 Score=39.00 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=42.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 020101 223 FVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTA 275 (331)
Q Consensus 223 ~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvv~k~Grs~ 275 (331)
+.+-|.++..|+..+.|.||+.+.|-....+.+..++++ .++||+++..|...
T Consensus 43 i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~i~~~~~pV~~~v~g~Aa 96 (193)
T 1yg6_A 43 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAA 96 (193)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEeeeHH
Confidence 344555777777889999999997766788888888887 67999999977654
No 422
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=84.83 E-value=2 Score=42.27 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=79.3
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEE-------eCCCCCCc-ee--------------------cCcccccCH
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKGGT-EH--------------------LGLPVFNTV 91 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~-------VnP~~~g~-~i--------------------~G~p~y~sl 91 (331)
.+..+|+|.|. |+.|+..++.|.+.|.++++. +||+..-. ++ .|...+ +-
T Consensus 233 l~Gk~vaVQG~-GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~-~~ 310 (450)
T 4fcc_A 233 FEGMRVSVSGS-GNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYL-EG 310 (450)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEE-ET
T ss_pred cCCCEEEEeCC-ChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEe-cC
Confidence 45678999998 999999999999999998854 55653200 00 011111 11
Q ss_pred HHhhhcCCCCEEEEe-cChhhHHHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEEccCCCCcccCCCccc
Q 020101 92 AEAKAETKANASAIY-VPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKI 170 (331)
Q Consensus 92 ~dl~~~~~iDlaii~-vp~~~~~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~viGPnc~Gi~~p~~~~~ 170 (331)
+++.. .++|+++=| +......+.++.+.+.|++.|+-.+-+....+..++ . +++||.++ |.
T Consensus 311 ~~i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~i---L-~~rGIl~~-PD------------ 372 (450)
T 4fcc_A 311 QQPWS-VPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATEL---F-QQAGVLFA-PG------------ 372 (450)
T ss_dssp CCGGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHH---H-HHTTCEEE-CH------------
T ss_pred ccccc-CCccEEeeccccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHH---H-HHCCCEEE-Ch------------
Confidence 22222 368999965 455666788888989999986644444433333332 2 46676554 44
Q ss_pred ccCCCCCCCCCCEEEEecChHHHHHHHHHHH
Q 020101 171 GIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT 201 (331)
Q Consensus 171 ~~~~~~~~~~G~valisQSG~~~~~~~~~~~ 201 (331)
++.-+|++...-+.|.+
T Consensus 373 --------------~~aNAGGVi~S~~E~~q 389 (450)
T 4fcc_A 373 --------------KAANAGGVATSGLEMAQ 389 (450)
T ss_dssp --------------HHHTTHHHHHHHHHHHH
T ss_pred --------------HHhcCccHhhhHHHHhh
Confidence 23457888877778765
No 423
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.82 E-value=1.8 Score=39.94 Aligned_cols=84 Identities=15% Similarity=0.155 Sum_probs=50.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCc-----ee-c-------Cccc--ccCHHHhhhcCCCCEEEEe
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-----EH-L-------GLPV--FNTVAEAKAETKANASAIY 106 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~-----~i-~-------G~p~--y~sl~dl~~~~~iDlaii~ 106 (331)
.||+|||+ |.+|..+...+...|. + +..+|.+...- ++ . ...+ ..+.+++ + +.|++|++
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~-~--~aD~Vi~a 77 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADT-A--NSDVIVVT 77 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG-T--TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHH-C--CCCEEEEc
Confidence 47899999 9999998888877775 7 44777654100 00 0 1111 2455443 3 68999999
Q ss_pred cChh----------------hHHHHHHHHHHcCCcEEEEec
Q 020101 107 VPPP----------------FAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 107 vp~~----------------~~~~~v~~~~~~Gi~~ivi~t 131 (331)
.+.. ...++.+++.+.+.+.+++..
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~ 118 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 118 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEc
Confidence 7322 223455556566666655444
No 424
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.75 E-value=0.48 Score=43.74 Aligned_cols=68 Identities=7% Similarity=-0.035 Sum_probs=45.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCC-cee---cCc---ccc--cCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGG-TEH---LGL---PVF--NTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g-~~i---~G~---p~y--~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+..+|+|+|+ |.+|+.++..|.+.|. +++ .+|.+... ++. .+. .+. .++.+... +.|++|.++|..
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~-v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~--~aDivIn~t~~~ 215 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERID-MANRTVEKAERLVREGDERRSAYFSLAEAETRLA--EYDIIINTTSVG 215 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEE-EECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGG--GCSEEEECSCTT
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEE-EEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhc--cCCEEEECCCCC
Confidence 4567899999 8899999999999998 565 88876411 111 111 121 23444444 689999999876
Q ss_pred hH
Q 020101 111 FA 112 (331)
Q Consensus 111 ~~ 112 (331)
..
T Consensus 216 ~~ 217 (297)
T 2egg_A 216 MH 217 (297)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 425
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=84.63 E-value=1.3 Score=41.96 Aligned_cols=90 Identities=17% Similarity=0.057 Sum_probs=62.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc---CCeEEEEeCCCCC-------------C----------ce--ecC--cccc--c
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY---GTKMVGGVTPKKG-------------G----------TE--HLG--LPVF--N 89 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~---g~~iv~~VnP~~~-------------g----------~~--i~G--~p~y--~ 89 (331)
.+||+|-|. |++|+.+.|.+.+. ++++++.-||... | +. +.| ++++ .
T Consensus 2 ~~kv~INGf-GrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 80 (335)
T 3doc_A 2 AVRVAINGF-GRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAVR 80 (335)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECCS
T ss_pred CEEEEEECC-CcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEeec
Confidence 368999999 99999999987765 4678866666210 0 00 123 2344 2
Q ss_pred CHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 90 sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
+.++++- +.++|+++-++......+-+...++.|.+.+++-++
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsap 124 (335)
T 3doc_A 81 NPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAP 124 (335)
T ss_dssp STTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred ccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCC
Confidence 4555542 247999999999888888889999999998775333
No 426
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=84.31 E-value=1.9 Score=40.25 Aligned_cols=85 Identities=11% Similarity=0.039 Sum_probs=51.8
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCc-----ee------c--C--cccccCHHHhhhcCCCCEEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-----EH------L--G--LPVFNTVAEAKAETKANASAI 105 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~-----~i------~--G--~p~y~sl~dl~~~~~iDlaii 105 (331)
..||+|||+ |.+|..+...+...|+ + +..+|.+...- ++ . . +....+.++ .+ +.|++|+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~a-l~--~aD~Vi~ 78 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDD-LA--GADVVIV 78 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGG-GT--TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHH-hC--CCCEEEE
Confidence 457999999 9999998888888787 7 44766554200 01 0 1 112245533 33 6899999
Q ss_pred ec--Chh-------------------hHHHHHHHHHHcCCcEEEEec
Q 020101 106 YV--PPP-------------------FAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 106 ~v--p~~-------------------~~~~~v~~~~~~Gi~~ivi~t 131 (331)
++ |.. ...++++++.+...+.++++.
T Consensus 79 a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 125 (322)
T 1t2d_A 79 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV 125 (322)
T ss_dssp CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred eCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 97 421 345566666666656544333
No 427
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=84.24 E-value=1 Score=41.97 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=49.0
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHH-cCCeEEEEeCCCCCCcee-------cCcc--cccCHHHhhhcCCCCEEEEecC
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVTPKKGGTEH-------LGLP--VFNTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~-~g~~iv~~VnP~~~g~~i-------~G~p--~y~sl~dl~~~~~iDlaii~vp 108 (331)
.++..+++|||+ |.+|+.+++.+.. .+.+-+...|+.. .+.. .|++ .+ +++++.. +.|+++.+||
T Consensus 118 ~~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~-a~~la~~l~~~~g~~~~~~-~~~eav~--~aDIVi~aT~ 192 (313)
T 3hdj_A 118 RPRSSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPYA-SPEILERIGRRCGVPARMA-APADIAA--QADIVVTATR 192 (313)
T ss_dssp CTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTTC-CHHHHHHHHHHHTSCEEEC-CHHHHHH--HCSEEEECCC
T ss_pred cCCCcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCcH-HHHHHHHHHHhcCCeEEEe-CHHHHHh--hCCEEEEccC
Confidence 455678999999 9999999998876 4665455888872 2221 2553 34 8888877 6899999998
Q ss_pred hh
Q 020101 109 PP 110 (331)
Q Consensus 109 ~~ 110 (331)
..
T Consensus 193 s~ 194 (313)
T 3hdj_A 193 ST 194 (313)
T ss_dssp CS
T ss_pred CC
Confidence 74
No 428
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.09 E-value=1.5 Score=40.49 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=29.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG 78 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~ 78 (331)
+..+|+|||+ |..|..++++|...|..-+..||+...
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4567899999 889999999999988753337787653
No 429
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=84.09 E-value=3.9 Score=40.04 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=25.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~ 76 (331)
+..+|+|||. |-+|-...-.+.+.|++++ ++|.+
T Consensus 20 ~m~~IaViGl-GYVGLp~A~~~A~~G~~V~-g~Did 53 (444)
T 3vtf_A 20 HMASLSVLGL-GYVGVVHAVGFALLGHRVV-GYDVN 53 (444)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCEEE-EECSC
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHhCCCcEE-EEECC
Confidence 3467899998 7777666667777899988 65544
No 430
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.06 E-value=1.6 Score=42.64 Aligned_cols=82 Identities=7% Similarity=-0.076 Sum_probs=56.5
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee------cCccccc---CHHHhhhcCCCCEEEEecCh
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH------LGLPVFN---TVAEAKAETKANASAIYVPP 109 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i------~G~p~y~---sl~dl~~~~~iDlaii~vp~ 109 (331)
.-+..+|+|||+ |+.|..-++.|.+.|.+++ .|+|+.. +++ .++.... +-+++ + +.|+++.++..
T Consensus 9 ~l~~~~vlVvGg-G~va~~k~~~L~~~ga~V~-vi~~~~~-~~~~~l~~~~~i~~~~~~~~~~~l-~--~~~lVi~at~~ 82 (457)
T 1pjq_A 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLT-VNALTFI-PQFTVWANEGMLTLVEGPFDETLL-D--SCWLAIAATDD 82 (457)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEE-EEESSCC-HHHHHHHTTTSCEEEESSCCGGGG-T--TCSEEEECCSC
T ss_pred ECCCCEEEEECC-CHHHHHHHHHHHhCcCEEE-EEcCCCC-HHHHHHHhcCCEEEEECCCCcccc-C--CccEEEEcCCC
Confidence 345678999999 8999888999999999876 8888642 111 1232221 12333 2 58999988765
Q ss_pred h-hHHHHHHHHHHcCCcE
Q 020101 110 P-FAAAAILEAMEAELDL 126 (331)
Q Consensus 110 ~-~~~~~v~~~~~~Gi~~ 126 (331)
. .-..+.++|-++|+..
T Consensus 83 ~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 83 DTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCEE
Confidence 5 4677888888888763
No 431
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=84.00 E-value=2 Score=40.54 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=63.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCC----------C---Cc---e---------ecC--cccc--cCH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKK----------G---GT---E---------HLG--LPVF--NTV 91 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~----------~---g~---~---------i~G--~p~y--~sl 91 (331)
.+||+|-|. |++|+.+.|.+.+. .+++++.-|... + |+ + +.| ++++ .+.
T Consensus 4 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (338)
T 3lvf_P 4 AVKVAINGF-GRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDA 82 (338)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred cEEEEEECC-CcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEeccc
Confidence 478999999 99999999987765 578885533210 0 10 0 223 3444 356
Q ss_pred HHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 92 ~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
++++- +.++|+++-++......+-+...++.|.+.+++-++
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISap 124 (338)
T 3lvf_P 83 SKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAP 124 (338)
T ss_dssp GGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred ccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCC
Confidence 66653 247999999999888888899999999998775333
No 432
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=83.94 E-value=2.8 Score=38.74 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=53.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-------eEEEEeCCCCC-----Cc--ee--------cCcccccCHHHhhhcC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-------KMVGGVTPKKG-----GT--EH--------LGLPVFNTVAEAKAET 98 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-------~iv~~VnP~~~-----g~--~i--------~G~p~y~sl~dl~~~~ 98 (331)
+.+||+|+|++|..|+.+...|.+.|+ +++ .+|.... +. ++ ..+....++.+..+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~-l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~-- 79 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQ-LLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK-- 79 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEE-EEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC--
Confidence 356899999999999999988887775 565 6664320 00 11 01122234555555
Q ss_pred CCCEEEEecC-----h-----------hhHHHHHHHHHHcC-Cc-EEEEec
Q 020101 99 KANASAIYVP-----P-----------PFAAAAILEAMEAE-LD-LVVCIT 131 (331)
Q Consensus 99 ~iDlaii~vp-----~-----------~~~~~~v~~~~~~G-i~-~ivi~t 131 (331)
++|+++.+.. . ....++++.+.+.+ .+ .+++++
T Consensus 80 ~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~s 130 (327)
T 1y7t_A 80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (327)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 7999997632 1 11344567777775 65 445444
No 433
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=83.85 E-value=2.7 Score=42.69 Aligned_cols=89 Identities=13% Similarity=0.092 Sum_probs=54.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCCCcee---cCcccc-------cC-HHHhhhcCCCCEEEEecC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEH---LGLPVF-------NT-VAEAKAETKANASAIYVP 108 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~g~~i---~G~p~y-------~s-l~dl~~~~~iDlaii~vp 108 (331)
+..+|+|.|++|-+|+.+++.|.+. |+++++.......-... .++..+ .+ ++++.+ ++|+++-+..
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih~Aa 391 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVA 391 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH--HCSEEEECCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc--CCCEEEECce
Confidence 4567999999999999999999987 88887543321110111 122211 11 333444 6899986431
Q ss_pred h------------------hhHHHHHHHHHHcCCcEEEEecC
Q 020101 109 P------------------PFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 109 ~------------------~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
. .....+++.|.+.| +.++.+++
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS 432 (660)
T 1z7e_A 392 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPST 432 (660)
T ss_dssp CCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECC
T ss_pred ecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEec
Confidence 1 12345677788888 66676665
No 434
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.66 E-value=1.2 Score=40.26 Aligned_cols=84 Identities=17% Similarity=0.069 Sum_probs=50.3
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE---EEecChhhHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAILE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla---ii~vp~~~~~~~v~~ 118 (331)
...++|.|+++-+|+.+++.|.+.|++++ .++.+.. +. .-...+++.. ...++. .+.+.++.+.+++++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~~~~~-~~-----~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIA-ITGIGDA-EG-----VAPVIAELSG-LGARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCCH-HH-----HHHHHHHHHH-TTCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEE-EEeCCCH-HH-----HHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHH
Confidence 34577889999999999999999999977 4442210 11 0011222221 122222 245667777888887
Q ss_pred HHHc--CCcEEEEecCCC
Q 020101 119 AMEA--ELDLVVCITEGI 134 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G~ 134 (331)
+.+. ++..+|+ ..|+
T Consensus 101 ~~~~~g~iD~lvn-nAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVN-NAGI 117 (280)
T ss_dssp HHHHHSCCCEEEE-ECC-
T ss_pred HHHHcCCCCEEEE-CCCc
Confidence 7765 6887665 4454
No 435
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=83.63 E-value=3.6 Score=36.03 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=27.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
..+++|.|+++.+|+.+.+.|.+.|++++ .++.
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r 39 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVT-GFDQ 39 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 34578899999999999999999999977 4443
No 436
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=83.56 E-value=8.4 Score=34.64 Aligned_cols=83 Identities=11% Similarity=0.049 Sum_probs=50.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEE---EecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlai---i~vp~~~~~~~v~ 117 (331)
+...|+|.|+++-+|+.+.+.|.+.|++++ .++.+. +. .-..+.+..++...++.. +.+-++.+.+.++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIA-IAYLDE--EG-----DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESSC--HH-----HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCc--hH-----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 445688899999999999999999999976 444332 11 001122222222233332 4456677777777
Q ss_pred HHHHc--CCcEEEEec
Q 020101 118 EAMEA--ELDLVVCIT 131 (331)
Q Consensus 118 ~~~~~--Gi~~ivi~t 131 (331)
++.+. ++..+|+.+
T Consensus 118 ~~~~~~g~iD~lvnnA 133 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNV 133 (291)
T ss_dssp HHHHHHSSCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 77664 588766543
No 437
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=83.39 E-value=2.6 Score=36.44 Aligned_cols=30 Identities=17% Similarity=0.115 Sum_probs=26.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVG 71 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~ 71 (331)
..+|+|.|+++.+|+.+.+.|.+.|++++.
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~ 34 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVL 34 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 456788999999999999999999999773
No 438
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=83.36 E-value=1.4 Score=41.33 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=50.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCCCcee--------cCccc-------ccCHHHhhhcCCCCEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKGGTEH--------LGLPV-------FNTVAEAKAETKANAS 103 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~g~~i--------~G~p~-------y~sl~dl~~~~~iDla 103 (331)
+..+|+|+|+ |.+|..++..+...|. +++ .+|... +.. .+.|. +.+-.+... +.|++
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~-l~D~~~--~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~--~aDvV 77 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELV-VIDVNK--EKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCK--DADIV 77 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSCH--HHHHHHHHHHHHTGGGSSSCCEEEEECGGGGT--TCSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEecch--HHHHHHHHHHHhccccccCCeEEEeCcHHHhC--CCCEE
Confidence 3568999998 9999999888887775 555 777643 211 12232 222222233 68999
Q ss_pred EEecCh----------------hhHHHHHHHHHHcCCcEEEE
Q 020101 104 AIYVPP----------------PFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 104 ii~vp~----------------~~~~~~v~~~~~~Gi~~ivi 129 (331)
|++.+. ....++++.+.+...+.+++
T Consensus 78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vl 119 (326)
T 3pqe_A 78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFL 119 (326)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 998732 12345556666666665443
No 439
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=83.36 E-value=1.3 Score=42.08 Aligned_cols=90 Identities=18% Similarity=0.126 Sum_probs=64.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCC-------------C----------ce--ecC--cccc--cCH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKG-------------G----------TE--HLG--LPVF--NTV 91 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~-------------g----------~~--i~G--~p~y--~sl 91 (331)
.+||+|-|. |++|+.+.|.+.+. .+++++.-||... | +. +.| ++++ .+.
T Consensus 4 ~~kv~INGf-GrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (345)
T 4dib_A 4 MTRVAINGF-GRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRDP 82 (345)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSCG
T ss_pred cEEEEEECC-CcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCCh
Confidence 578999999 99999999987765 6889866666310 0 00 223 3444 346
Q ss_pred HHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEEecC
Q 020101 92 AEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVCITE 132 (331)
Q Consensus 92 ~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi~t~ 132 (331)
++++- +.++|+++-++......+-+...++.|.+.+++-++
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISap 124 (345)
T 4dib_A 83 KELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAP 124 (345)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred hhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCC
Confidence 66653 247999999999888888889999999998776433
No 440
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=82.92 E-value=3.6 Score=38.36 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=26.3
Q ss_pred cccCCCCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCC
Q 020101 36 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPK 76 (331)
Q Consensus 36 ~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~ 76 (331)
+++..++.||+|+|+ |..|....-.+...+. +++ .+|..
T Consensus 3 ~~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~-L~Di~ 43 (326)
T 2zqz_A 3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIG-IVDIF 43 (326)
T ss_dssp ---CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSC
T ss_pred ccccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEE-EEeCC
Confidence 345566789999999 9999887766665553 454 66654
No 441
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=82.78 E-value=2.8 Score=37.73 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=50.1
Q ss_pred ccccccCCCCCCCCCCCCcccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhh
Q 020101 16 SSEICCGQSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAK 95 (331)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~ 95 (331)
+|+-|-.++..|-+. ++..+...++|.|+++-+|+.+.+.|.+.|++++ .++.+. +.. -...+++.
T Consensus 8 ~~~~~~~~~~~~~~~------m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~-----~~~~~~l~ 73 (283)
T 3v8b_A 8 SSGVDLGTENLYFQS------MMNQPSPVALITGAGSGIGRATALALAADGVTVG-ALGRTR--TEV-----EEVADEIV 73 (283)
T ss_dssp -------------------------CCCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESSH--HHH-----HHHHHHHT
T ss_pred ccccccccchhhhhh------hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHH-----HHHHHHHH
Confidence 445555444444332 3323345678899999999999999999999977 554432 110 01122222
Q ss_pred hcCCCCEE---EEecChhhHHHHHHHHHHc--CCcEEEEecCC
Q 020101 96 AETKANAS---AIYVPPPFAAAAILEAMEA--ELDLVVCITEG 133 (331)
Q Consensus 96 ~~~~iDla---ii~vp~~~~~~~v~~~~~~--Gi~~ivi~t~G 133 (331)
. ...++. .+.+.++.+.++++++.+. ++..+|+ ..|
T Consensus 74 ~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn-nAg 114 (283)
T 3v8b_A 74 G-AGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVA-NAG 114 (283)
T ss_dssp T-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE-CCC
T ss_pred h-cCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE-CCC
Confidence 1 122222 2445666777777777664 5887554 444
No 442
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=82.75 E-value=2.3 Score=38.01 Aligned_cols=79 Identities=16% Similarity=0.220 Sum_probs=50.8
Q ss_pred CCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHH
Q 020101 39 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILE 118 (331)
Q Consensus 39 ~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~ 118 (331)
..+..+|+|.|+++-+|+.+++.|.+.|++++ .++.+. +...+ . ..-+..+.+.++.+.+++++
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r~~--~~~~~---------~----~~~~~~Dv~~~~~v~~~~~~ 74 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVV-SVSLDE--KSDVN---------V----SDHFKIDVTNEEEVKEAVEK 74 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEESCC----CTT---------S----SEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCc--hhccC---------c----eeEEEecCCCHHHHHHHHHH
Confidence 34566788899999999999999999999977 444332 11111 0 00122345667777777777
Q ss_pred HHHc--CCcEEEEecCCC
Q 020101 119 AMEA--ELDLVVCITEGI 134 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G~ 134 (331)
+.+. ++..+|+ ..|.
T Consensus 75 ~~~~~g~iD~lv~-nAg~ 91 (269)
T 3vtz_A 75 TTKKYGRIDILVN-NAGI 91 (269)
T ss_dssp HHHHHSCCCEEEE-CCCC
T ss_pred HHHHcCCCCEEEE-CCCc
Confidence 7665 6887664 4453
No 443
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=82.72 E-value=3.6 Score=38.07 Aligned_cols=86 Identities=12% Similarity=0.116 Sum_probs=52.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcC--CeEEEEeCCCC-CCc--eec-C-----cccc---cCHHHhhhcCCCCEEEEecC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYG--TKMVGGVTPKK-GGT--EHL-G-----LPVF---NTVAEAKAETKANASAIYVP 108 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g--~~iv~~VnP~~-~g~--~i~-G-----~p~y---~sl~dl~~~~~iDlaii~vp 108 (331)
+||+|+|++|..|+.+...|...+ .+++ .+|... .+. ++. . +..+ .++++..+ +.|+++++..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~-L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~--~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLT-LYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK--GCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEE-EEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT--TCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEE-EEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhC--CCCEEEECCC
Confidence 378999999999999888887766 4554 544332 111 111 1 2222 24666555 7999999863
Q ss_pred h----------------hhHHHHHHHHHHcCCcEEEEec
Q 020101 109 P----------------PFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 109 ~----------------~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
. ....++++.+.+.+.+..+++.
T Consensus 78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 116 (314)
T 1mld_A 78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (314)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 2 2355666777777766544443
No 444
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=82.69 E-value=1.5 Score=43.10 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=46.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe--CCCCCC-ceecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGV--TPKKGG-TEHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V--nP~~~g-~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
...+|+|+|. |++|+.+++.++.+|.+++ .+ ||...- ....|+.+ .+++++.. ..|+++.+++..
T Consensus 246 ~GKTVgVIG~-G~IGr~vA~~lrafGa~Vi-v~d~dp~~a~~A~~~G~~v-v~LeElL~--~ADIVv~atgt~ 313 (464)
T 3n58_A 246 AGKVAVVCGY-GDVGKGSAQSLAGAGARVK-VTEVDPICALQAAMDGFEV-VTLDDAAS--TADIVVTTTGNK 313 (464)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSHHHHHHHHHTTCEE-CCHHHHGG--GCSEEEECCSSS
T ss_pred cCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EEeCCcchhhHHHhcCcee-ccHHHHHh--hCCEEEECCCCc
Confidence 4567889999 9999999999999999976 44 443200 01245543 47889887 789999887543
No 445
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=82.54 E-value=2.6 Score=37.87 Aligned_cols=91 Identities=18% Similarity=0.195 Sum_probs=54.7
Q ss_pred cccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCC-EEEEecChhhHHH
Q 020101 36 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAA 114 (331)
Q Consensus 36 ~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iD-laii~vp~~~~~~ 114 (331)
..+.-+...++|.|+++-+|+.+.+.|.+.|++++ .++.+. +.. ......+.+... ++. +..+.+.++.+.+
T Consensus 26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~--~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVA-VAARHS--DAL--QVVADEIAGVGG--KALPIRCDVTQPDQVRG 98 (276)
T ss_dssp GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEESSG--GGG--HHHHHHHHHTTC--CCEEEECCTTCHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHH--HHHHHHHHhcCC--eEEEEEcCCCCHHHHHH
Confidence 44444556788899999999999999999999976 444432 110 011111222111 222 2235566777777
Q ss_pred HHHHHHHc--CCcEEEEecCCC
Q 020101 115 AILEAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 115 ~v~~~~~~--Gi~~ivi~t~G~ 134 (331)
+++++.+. ++..+|+ ..|.
T Consensus 99 ~~~~~~~~~g~iD~lvn-nAg~ 119 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVC-NAGI 119 (276)
T ss_dssp HHHHHHHHHSCCSEEEE-CCCC
T ss_pred HHHHHHHHcCCCCEEEE-CCCC
Confidence 88777665 6888665 4443
No 446
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=82.21 E-value=2.6 Score=36.91 Aligned_cols=82 Identities=21% Similarity=0.242 Sum_probs=48.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCe-EEEEeCCCCCCceecCcccccCHHHhhhcC-CCCEE---EEecCh-hhHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTK-MVGGVTPKKGGTEHLGLPVFNTVAEAKAET-KANAS---AIYVPP-PFAAAA 115 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~-iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~-~iDla---ii~vp~-~~~~~~ 115 (331)
..+|+|.|+++-+|+.+++.|.+.|++ ++ .++.+. .. ..++++.+.. ..++. .+.+.+ +.+.+.
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~-~~~r~~--~~-------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 74 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFV-ILDRVE--NP-------TALAELKAINPKVNITFHTYDVTVPVAESKKL 74 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEE-EEESSC--CH-------HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEE-EEecCc--hH-------HHHHHHHHhCCCceEEEEEEecCCChHHHHHH
Confidence 456788999999999999999999996 55 554432 11 1122322210 11222 133334 566666
Q ss_pred HHHHHHc--CCcEEEEecCCC
Q 020101 116 ILEAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 116 v~~~~~~--Gi~~ivi~t~G~ 134 (331)
++++.+. ++..+|+ ..|+
T Consensus 75 ~~~~~~~~g~id~lv~-~Ag~ 94 (254)
T 1sby_A 75 LKKIFDQLKTVDILIN-GAGI 94 (254)
T ss_dssp HHHHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHHhcCCCCEEEE-CCcc
Confidence 6666554 6887654 5554
No 447
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=81.88 E-value=1.7 Score=39.13 Aligned_cols=85 Identities=15% Similarity=0.107 Sum_probs=50.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE---EEecChhhHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAILE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla---ii~vp~~~~~~~v~~ 118 (331)
...++|.|+++-+|+.+++.|.+.|++++ .++.+.. +.. -...+++.+.....+. .+.+.++.+.+++++
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~-~~~r~~~-~~~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIV-LNGFGAP-DEI-----RTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEE-EECCCCH-HHH-----HHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCCh-HHH-----HHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 45578899999999999999999999977 5554220 110 0011222111112222 245566777777777
Q ss_pred HHHc--CCcEEEEecCCC
Q 020101 119 AMEA--ELDLVVCITEGI 134 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G~ 134 (331)
+.+. ++..+|+ ..|.
T Consensus 98 ~~~~~g~iD~lv~-nAg~ 114 (281)
T 3v2h_A 98 VADRFGGADILVN-NAGV 114 (281)
T ss_dssp HHHHTSSCSEEEE-CCCC
T ss_pred HHHHCCCCCEEEE-CCCC
Confidence 7665 5887664 4453
No 448
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=81.50 E-value=3.5 Score=38.27 Aligned_cols=80 Identities=13% Similarity=-0.019 Sum_probs=48.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC------ceecCcccccCHHHhhh-cCCCCEEEEecChhhHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG------TEHLGLPVFNTVAEAKA-ETKANASAIYVPPPFAAAA 115 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g------~~i~G~p~y~sl~dl~~-~~~iDlaii~vp~~~~~~~ 115 (331)
.+|+|+|. |..|..+++.+++.|++++ .+|++... ++..-++.+.+.+.+.. ..++|+++...-.......
T Consensus 2 K~I~ilGg-g~~g~~~~~~Ak~~G~~vv-~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~ 79 (363)
T 4ffl_A 2 KTICLVGG-KLQGFEAAYLSKKAGMKVV-LVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENLACIEF 79 (363)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCChhHHHH
Confidence 56889997 7778888888899999987 66655421 11222334444333322 2379988765444444455
Q ss_pred HHHHHHcCC
Q 020101 116 ILEAMEAEL 124 (331)
Q Consensus 116 v~~~~~~Gi 124 (331)
..++.+.+.
T Consensus 80 ~~~~~~~~~ 88 (363)
T 4ffl_A 80 LNSIKEKFS 88 (363)
T ss_dssp HHHHGGGCS
T ss_pred HHHHHHHCC
Confidence 566666553
No 449
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=81.33 E-value=3 Score=40.53 Aligned_cols=85 Identities=20% Similarity=0.133 Sum_probs=51.8
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHH-cCCeEEEEeC-------CCCCC-cee-------cCccccc-----CHHHhhhcC
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIE-YGTKMVGGVT-------PKKGG-TEH-------LGLPVFN-----TVAEAKAET 98 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~-~g~~iv~~Vn-------P~~~g-~~i-------~G~p~y~-----sl~dl~~~~ 98 (331)
.+..+|+|.|. |++|+..++.|.+ .|.++++..| |+..- +.+ ..+.-|+ +.+++.+ .
T Consensus 207 l~g~~vaVqG~-GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~-~ 284 (415)
T 2tmg_A 207 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE-L 284 (415)
T ss_dssp TTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT-C
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc-C
Confidence 35678999998 9999999999998 9999987644 42210 000 0111121 3445543 4
Q ss_pred CCCEEEEecChhhHHHHHHHHHHcCCcEEE
Q 020101 99 KANASAIYVPPPFAAAAILEAMEAELDLVV 128 (331)
Q Consensus 99 ~iDlaii~vp~~~~~~~v~~~~~~Gi~~iv 128 (331)
++|+++-|...... .-+.+.+.+.+.|+
T Consensus 285 ~~DIliP~A~~n~i--~~~~a~~l~ak~V~ 312 (415)
T 2tmg_A 285 DVDILVPAALEGAI--HAGNAERIKAKAVV 312 (415)
T ss_dssp SCSEEEECSSTTSB--CHHHHTTCCCSEEE
T ss_pred CCcEEEecCCcCcc--CcccHHHcCCeEEE
Confidence 78999987654433 12444455778644
No 450
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=81.19 E-value=4.7 Score=34.93 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=27.4
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~ 76 (331)
.+++|.|+++.+|+.+.+.|.+.|++++ .++.+
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~-~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVA-IASRN 35 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCC
Confidence 4578899999999999999999999977 55443
No 451
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.85 E-value=4.4 Score=38.30 Aligned_cols=36 Identities=28% Similarity=0.453 Sum_probs=29.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
+..+|+|+|+ |..|..++++|...|..-+..||+..
T Consensus 33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4677899999 88999999999999986444777765
No 452
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=80.84 E-value=4.2 Score=36.89 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=52.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE---EEecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla---ii~vp~~~~~~~v~ 117 (331)
+...|+|.|+++-+|+.+++.|.+.|++++ .++.+. +.. -...+++... ..++. .+.+..+.+.+.++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLV-LSDVDQ--PAL-----EQAVNGLRGQ-GFDAHGVVCDVRHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEECCH--HHH-----HHHHHHHHhc-CCceEEEEccCCCHHHHHHHHH
Confidence 345678899999999999999999999977 554432 111 1112222221 22322 34556677777777
Q ss_pred HHHHc--CCcEEEEecCCC
Q 020101 118 EAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 118 ~~~~~--Gi~~ivi~t~G~ 134 (331)
++.+. ++..+|+ ..|+
T Consensus 101 ~~~~~~g~id~lvn-nAg~ 118 (301)
T 3tjr_A 101 EAFRLLGGVDVVFS-NAGI 118 (301)
T ss_dssp HHHHHHSSCSEEEE-CCCC
T ss_pred HHHHhCCCCCEEEE-CCCc
Confidence 77665 6888664 5553
No 453
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=80.71 E-value=2.2 Score=42.75 Aligned_cols=36 Identities=11% Similarity=0.023 Sum_probs=29.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
++.+|+|||+ |-.|..++++|...|..-+..||+..
T Consensus 31 ~~~~VlvvG~-GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 31 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3567899999 88999999999999986444888764
No 454
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=80.66 E-value=4.4 Score=35.53 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=52.5
Q ss_pred CCCeEEEEEcCC--CCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhc-CCCCE-EEEecChhhHHHH
Q 020101 40 DKNTRVICQGIT--GKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKANA-SAIYVPPPFAAAA 115 (331)
Q Consensus 40 ~k~~~VaIvGas--gk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~-~~iDl-aii~vp~~~~~~~ 115 (331)
.+..+|+|.|++ +.+|+.+.+.|.+.|++++ .++.+. .. -..++++.++ ..+.. ..+.+..+.+...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~-~~~r~~--~~------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 82 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELA-FTYVGD--RF------KDRITEFAAEFGSELVFPCDVADDAQIDAL 82 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEE-EEESSG--GG------HHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEE-EEecch--hh------HHHHHHHHHHcCCcEEEECCCCCHHHHHHH
Confidence 456678899998 8899999999999999977 443322 10 1113333221 12222 2355667778888
Q ss_pred HHHHHHc--CCcEEEEecCCC
Q 020101 116 ILEAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 116 v~~~~~~--Gi~~ivi~t~G~ 134 (331)
++++.+. ++..+| ...|+
T Consensus 83 ~~~~~~~~g~id~lv-~nAg~ 102 (271)
T 3ek2_A 83 FASLKTHWDSLDGLV-HSIGF 102 (271)
T ss_dssp HHHHHHHCSCEEEEE-ECCCC
T ss_pred HHHHHHHcCCCCEEE-ECCcc
Confidence 8887765 466655 45553
No 455
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=80.54 E-value=3.4 Score=36.67 Aligned_cols=84 Identities=20% Similarity=0.100 Sum_probs=49.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEE---EecChhhHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlai---i~vp~~~~~~~v~~ 118 (331)
...|+|.|+++.+|+.+++.|.+.|++++....... +... .. .+++.+ ...++.. +.+..+.+.+++++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~--~~~~--~~---~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 97 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR--EAAD--AV---VAAITE-SGGEAVAIPGDVGNAADIAAMFSA 97 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHH--HH---HHHHHH-TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh--hHHH--HH---HHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 345778899999999999999999999763334332 1100 01 112211 1222222 34556667777777
Q ss_pred HHHc--CCcEEEEecCCC
Q 020101 119 AMEA--ELDLVVCITEGI 134 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G~ 134 (331)
+.+. ++..+|. ..|+
T Consensus 98 ~~~~~g~id~li~-nAg~ 114 (272)
T 4e3z_A 98 VDRQFGRLDGLVN-NAGI 114 (272)
T ss_dssp HHHHHSCCCEEEE-CCCC
T ss_pred HHHhCCCCCEEEE-CCCC
Confidence 7664 6887654 4443
No 456
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=80.38 E-value=2.5 Score=41.52 Aligned_cols=86 Identities=10% Similarity=0.037 Sum_probs=54.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEE-------eCCCCC-Cc-ee-----------cCccccc--------CHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGG-------VTPKKG-GT-EH-----------LGLPVFN--------TVA 92 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~-------VnP~~~-g~-~i-----------~G~p~y~--------sl~ 92 (331)
+..+|+|.|. |++|+..++.|.+.|.++++. +||+.. -. ++ ..+.-|+ +-+
T Consensus 229 ~g~~v~VqG~-GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~~~ 307 (449)
T 1bgv_A 229 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGE 307 (449)
T ss_dssp TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEETC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeCch
Confidence 5678899998 999999999999999998864 556532 00 00 0111110 111
Q ss_pred HhhhcCCCCEEEEec-ChhhHHHHHHHHHHcCCcEEE
Q 020101 93 EAKAETKANASAIYV-PPPFAAAAILEAMEAELDLVV 128 (331)
Q Consensus 93 dl~~~~~iDlaii~v-p~~~~~~~v~~~~~~Gi~~iv 128 (331)
++. +.++|+++=|. +.....+.+..+...|++.|+
T Consensus 308 e~~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~ 343 (449)
T 1bgv_A 308 KPW-GQKVDIIMPCATQNDVDLEQAKKIVANNVKYYI 343 (449)
T ss_dssp CGG-GSCCSEEECCSCTTCBCHHHHHHHHHTTCCEEE
T ss_pred hhh-cCCcceeeccccccccchhhHHHHHhcCCeEEE
Confidence 222 23688888544 445567778888888999744
No 457
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=80.13 E-value=4.7 Score=39.78 Aligned_cols=67 Identities=12% Similarity=0.118 Sum_probs=50.3
Q ss_pred CCeEEEEEcCCCCCC---------cHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhh
Q 020101 41 KNTRVICQGITGKNG---------TFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPF 111 (331)
Q Consensus 41 k~~~VaIvGasgk~G---------~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~ 111 (331)
+..+|+|.|.+-|++ ..+++.|.+.|.++. ..||.. .....+....++++..+ +.|++|+.|..+.
T Consensus 352 ~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~-~~DP~~--~~~~~~~~~~~~~~~~~--~ad~vvi~t~~~~ 426 (478)
T 3g79_A 352 DGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVM-VHDPYV--VNYPGVEISDNLEEVVR--NADAIVVLAGHSA 426 (478)
T ss_dssp TTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEE-EECSSC--CCBTTBCEESCHHHHHT--TCSEEEECSCCHH
T ss_pred CCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEE-EECCCc--ccccCcceecCHHHHHh--cCCEEEEecCCHH
Confidence 456799999986654 356788888999877 889987 44444444467888776 7999999998765
Q ss_pred H
Q 020101 112 A 112 (331)
Q Consensus 112 ~ 112 (331)
.
T Consensus 427 f 427 (478)
T 3g79_A 427 Y 427 (478)
T ss_dssp H
T ss_pred H
Confidence 4
No 458
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=80.02 E-value=0.84 Score=43.26 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=28.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCC
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKK 77 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~ 77 (331)
..+|+|+|+ |.+|+..++.+...|.+++ .+|++.
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~-~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVT-ILDVNH 199 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEE-EEECCH
Confidence 367889999 9999999999999999866 666543
No 459
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=79.97 E-value=1.7 Score=38.02 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=28.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
+...|+|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~-~~~r 45 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVI-IADL 45 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEeC
Confidence 345678999999999999999999999977 5544
No 460
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=79.95 E-value=4.8 Score=35.25 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=27.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
+..+|+|.|+++.+|+.+++.|.+.|++++ .++.
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~-~~~r 46 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIH-TCAR 46 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 345678899999999999999999999877 4443
No 461
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=79.92 E-value=1.3 Score=40.41 Aligned_cols=104 Identities=9% Similarity=0.021 Sum_probs=59.9
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-cee---cCcccccCHHHhhhcCCCCEEEEecChhhHHH---
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEH---LGLPVFNTVAEAKAETKANASAIYVPPPFAAA--- 114 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i---~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~--- 114 (331)
..+|+|+|+ |.+++.++..|.+.|.+-+..+|.+... ++. .+.+...++. .. +.|++|-+||......
T Consensus 119 ~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~--~~DivInaTp~gm~~~~~~ 193 (271)
T 1npy_A 119 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQ--QADILVNVTSIGMKGGKEE 193 (271)
T ss_dssp TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TC--CCSEEEECSSTTCTTSTTT
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cc--cCCEEEECCCCCccCcccc
Confidence 356889999 9999999999999998533388887421 111 1222111222 12 6899999999766421
Q ss_pred ----HHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 115 ----AILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 115 ----~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
+-.+++..+. .++-+. +.+.+. .+.+.| +++|.+++
T Consensus 194 ~~~~~~~~~l~~~~-~v~Dlv--Y~P~~T-~ll~~A-~~~G~~~i 233 (271)
T 1npy_A 194 MDLAFPKAFIDNAS-VAFDVV--AMPVET-PFIRYA-QARGKQTI 233 (271)
T ss_dssp TSCSSCHHHHHHCS-EEEECC--CSSSSC-HHHHHH-HHTTCEEE
T ss_pred CCCCCCHHHcCCCC-EEEEee--cCCCCC-HHHHHH-HHCCCEEE
Confidence 2234555442 223222 322221 344555 67888765
No 462
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=79.81 E-value=4.4 Score=37.47 Aligned_cols=87 Identities=15% Similarity=0.146 Sum_probs=49.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCCCCC---Cc--ee-cCc-------ccccCHHHhhhcCCCCEEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTPKKG---GT--EH-LGL-------PVFNTVAEAKAETKANASAI 105 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP~~~---g~--~i-~G~-------p~y~sl~dl~~~~~iDlaii 105 (331)
+..||+|||+ |..|...+..+...+. +++ .+|.+.. +. ++ .+. .++.+..+..+ +.|++|+
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~-L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~--~aDvVvi 80 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELV-IIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCH--DADLVVI 80 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEE-EECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGT--TCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhC--CCCEEEE
Confidence 4568999999 9999888776666664 454 6665431 10 00 111 12222223233 7899999
Q ss_pred ecChh----------------hHHHHHHHHHHcCCcEEEEec
Q 020101 106 YVPPP----------------FAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 106 ~vp~~----------------~~~~~v~~~~~~Gi~~ivi~t 131 (331)
+.+.. ...++++++.+...+.+++..
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA 122 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 88542 234455555566655544443
No 463
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=79.80 E-value=11 Score=34.51 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=48.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhHHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v~~~~ 120 (331)
+..+|+|+|++|.+|...++.++..|.+++ .++.+. +. ++.+.++...|.++.....+.. +.+.+..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi-~~~~~~--~~---------~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~ 215 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVV-GIAGGA--EK---------CRFLVEELGFDGAIDYKNEDLA-AGLKREC 215 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEESSH--HH---------HHHHHHTTCCSEEEETTTSCHH-HHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HH---------HHHHHHHcCCCEEEECCCHHHH-HHHHHhc
Confidence 456788999999999999999999999877 444332 11 2222122356777666554433 3344443
Q ss_pred HcCCcEEEEecCC
Q 020101 121 EAELDLVVCITEG 133 (331)
Q Consensus 121 ~~Gi~~ivi~t~G 133 (331)
..|+..++. +.|
T Consensus 216 ~~~~d~vi~-~~g 227 (336)
T 4b7c_A 216 PKGIDVFFD-NVG 227 (336)
T ss_dssp TTCEEEEEE-SSC
T ss_pred CCCceEEEE-CCC
Confidence 456776554 444
No 464
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=79.74 E-value=2.9 Score=37.30 Aligned_cols=51 Identities=14% Similarity=0.249 Sum_probs=39.2
Q ss_pred HHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEE---eCCCC
Q 020101 224 VDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFI---AGLTA 275 (331)
Q Consensus 224 ~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvv~k---~Grs~ 275 (331)
.+.|+.+.+ ++.++|++|+.+.|-......+..++++ ..||||++. .|...
T Consensus 28 ~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~~i~~~~~PVia~v~p~~G~Aa 82 (230)
T 3viv_A 28 DRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQRIQQSKIPVIIYVYPPGASAA 82 (230)
T ss_dssp HHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHHHHHTCSSCEEEEECSTTCEEE
T ss_pred HHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHHHHHhCCCCEEEEEecCCCEEh
Confidence 355566665 4699999999988766777888888776 889999998 66544
No 465
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=79.74 E-value=4.1 Score=35.88 Aligned_cols=80 Identities=16% Similarity=0.121 Sum_probs=48.7
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcC--CCCE-EEEecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAET--KANA-SAIYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~--~iDl-aii~vp~~~~~~~v~ 117 (331)
+..+|+|.|+++.+|+.+.+.|.+.|++++ .++.+. +. ++++.++. ++.. ..+.+.++.+.+.++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~~--~~---------~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~ 78 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVA-IADLDV--MA---------AQAVVAGLENGGFAVEVDVTKRASVDAAMQ 78 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HH---------HHHHHHTCTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEeCCH--HH---------HHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 445688999999999999999999999977 444332 11 11211110 1222 224455666666666
Q ss_pred HHHHc--CCcEEEEecCC
Q 020101 118 EAMEA--ELDLVVCITEG 133 (331)
Q Consensus 118 ~~~~~--Gi~~ivi~t~G 133 (331)
++.+. ++..+|+ ..|
T Consensus 79 ~~~~~~g~iD~lv~-~Ag 95 (263)
T 3ak4_A 79 KAIDALGGFDLLCA-NAG 95 (263)
T ss_dssp HHHHHHTCCCEEEE-CCC
T ss_pred HHHHHcCCCCEEEE-CCC
Confidence 66554 6887665 444
No 466
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=79.68 E-value=13 Score=35.11 Aligned_cols=83 Identities=18% Similarity=0.137 Sum_probs=46.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCC---C-----ceecCcccccCHH-------HhhhcCCCCEEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKG---G-----TEHLGLPVFNTVA-------EAKAETKANASA 104 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~---g-----~~i~G~p~y~sl~-------dl~~~~~iDlai 104 (331)
.|..+++|+|+ ++....+++.+++.|++++ .|++... . ++..-++.|.+.+ ++..+.++|.++
T Consensus 3 ~~~k~l~Il~~-~~~~~~i~~aa~~lG~~vv-~v~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~~~id~V~ 80 (425)
T 3vot_A 3 KRNKNLAIICQ-NKHLPFIFEEAERLGLKVT-FFYNSAEDFPGNLPAVERCVPLPLFEDEEAAMDVVRQTFVEFPFDGVM 80 (425)
T ss_dssp CCCCEEEEECC-CTTCCHHHHHHHHTTCEEE-EEEETTSCCCCSCTTEEEEEEECTTTCHHHHHHHHHHHHHHSCCSEEE
T ss_pred CCCcEEEEECC-ChhHHHHHHHHHHCCCEEE-EEECCCcccccCHhhccEEEecCCCCCHHHHHHHHHHhhhhcCCCEEE
Confidence 46677888998 6777788999999999977 4433221 0 1122344455422 223345788765
Q ss_pred EecChhhHHHHHHHHHHcCCc
Q 020101 105 IYVPPPFAAAAILEAMEAELD 125 (331)
Q Consensus 105 i~vp~~~~~~~v~~~~~~Gi~ 125 (331)
+.....+..+..-+-+.|++
T Consensus 81 -~~~e~~~~~~a~l~e~lglp 100 (425)
T 3vot_A 81 -TLFEPALPFTAKAAEALNLP 100 (425)
T ss_dssp -CCCGGGHHHHHHHHHHTTCS
T ss_pred -ECCchhHHHHHHHHHHcCCC
Confidence 33333344333434445543
No 467
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=79.63 E-value=2.6 Score=37.41 Aligned_cols=91 Identities=19% Similarity=0.126 Sum_probs=54.2
Q ss_pred cccccCCCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE---EEecChh
Q 020101 34 APAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS---AIYVPPP 110 (331)
Q Consensus 34 l~~ll~~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla---ii~vp~~ 110 (331)
...++.-+...|+|.|+++-+|+.+.+.|.+.|++++ .++.+. +.. -...+++.+....++. .+.+.++
T Consensus 12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~l~~~~~~~~~~~~~Dv~~~~ 83 (266)
T 4egf_A 12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLV-LSGRDV--SEL-----DAARRALGEQFGTDVHTVAIDLAEPD 83 (266)
T ss_dssp BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHHHHCCCEEEEECCTTSTT
T ss_pred cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCH--HHH-----HHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 4455544556788899999999999999999999976 554432 111 0011222110112222 2455667
Q ss_pred hHHHHHHHHHHc--CCcEEEEecCC
Q 020101 111 FAAAAILEAMEA--ELDLVVCITEG 133 (331)
Q Consensus 111 ~~~~~v~~~~~~--Gi~~ivi~t~G 133 (331)
.+.++++++.+. ++..+|+ ..|
T Consensus 84 ~v~~~~~~~~~~~g~id~lv~-nAg 107 (266)
T 4egf_A 84 APAELARRAAEAFGGLDVLVN-NAG 107 (266)
T ss_dssp HHHHHHHHHHHHHTSCSEEEE-ECC
T ss_pred HHHHHHHHHHHHcCCCCEEEE-CCC
Confidence 777777777664 6887665 444
No 468
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=79.63 E-value=1.8 Score=39.82 Aligned_cols=84 Identities=20% Similarity=0.123 Sum_probs=50.8
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCC--eEEEEeCC--CCCCceecC--------------cccccCHHHhhhcCCCCEEE
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGT--KMVGGVTP--KKGGTEHLG--------------LPVFNTVAEAKAETKANASA 104 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~--~iv~~VnP--~~~g~~i~G--------------~p~y~sl~dl~~~~~iDlai 104 (331)
.||+|+||+|..|+.+...+...+. +++ .+|. .. +...| ..+..+-.+..+ +.|++|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~-L~Di~~~~--~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~--~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVV-FVDIPDKE--DDTVGQAADTNHGIAYDSNTRVRQGGYEDTA--GSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEE-EECCGGGH--HHHHHHHHHHHHHHTTTCCCEEEECCGGGGT--TCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEE-EEcCCCCh--hhHHHHHHHHHHHHhhCCCcEEEeCCHHHhC--CCCEEE
Confidence 3789999889999998887776654 454 6665 32 11111 011111122233 789999
Q ss_pred EecCh----------------hhHHHHHHHHHHcCCcEEEEec
Q 020101 105 IYVPP----------------PFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 105 i~vp~----------------~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
++... ....++++.+.+.+.+.++++.
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~ 118 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT 118 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEe
Confidence 88642 2355677777788877766554
No 469
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=79.48 E-value=2.9 Score=35.59 Aligned_cols=69 Identities=14% Similarity=0.095 Sum_probs=40.1
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecC-hhhHHHHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVP-PPFAAAAILEAME 121 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp-~~~~~~~v~~~~~ 121 (331)
.+++|+|| |..|+.++..+...+|++++.+|... |.|++.+.++ +-++++.+ +..-....+++.+
T Consensus 4 ~~~~I~Ga-gg~gk~v~~~~~~~~~~v~~f~Dd~~------g~~vig~~~~-------~~~~iaig~~~~r~~~~~~l~~ 69 (194)
T 3bfp_A 4 EKIYIYGA-SGHGLVCEDVAKNMGYKECIFLDDFK------GMKFESTLPK-------YDFFIAIGNNEIRKKIYQKISE 69 (194)
T ss_dssp SEEEEEC---CHHHHHHHHHHHHTCSEEEEEC--------------CCCCC-------CEEEECCCCHHHHHHHHHHHHT
T ss_pred ccEEEEeC-CHHHHHHHHHHHhCCCeEEEEEeCCC------CCeEECCccc-------ceEEEEeCCHHHHHHHHHHHHH
Confidence 46889999 66889988888777899888887531 5566554332 23556664 3444556667767
Q ss_pred cCCc
Q 020101 122 AELD 125 (331)
Q Consensus 122 ~Gi~ 125 (331)
.+.+
T Consensus 70 ~~~~ 73 (194)
T 3bfp_A 70 NGFK 73 (194)
T ss_dssp TTCC
T ss_pred cCCc
Confidence 6764
No 470
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=79.47 E-value=4.6 Score=36.06 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=50.5
Q ss_pred CCeEEEEEcCCCC--CCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhc-CCCC-EEEEecChhhHHHHH
Q 020101 41 KNTRVICQGITGK--NGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKAN-ASAIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk--~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~-~~iD-laii~vp~~~~~~~v 116 (331)
+...|+|.|+++. +|+.+++.|.+.|++++ .++.+.. . ..++++.++ .++. +..+.+..+.+.+++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~r~~~-~--------~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 94 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELA-FTYVGQF-K--------DRVEKLCAEFNPAAVLPCDVISDQEIKDLF 94 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEE-EEECTTC-H--------HHHHHHHGGGCCSEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEE-EeeCchH-H--------HHHHHHHHhcCCceEEEeecCCHHHHHHHH
Confidence 4456788999855 99999999999999976 4443220 1 113333221 1122 223456677777788
Q ss_pred HHHHHc--CCcEEEEecCCC
Q 020101 117 LEAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 117 ~~~~~~--Gi~~ivi~t~G~ 134 (331)
+++.+. ++..+|+ ..|+
T Consensus 95 ~~~~~~~g~id~li~-nAg~ 113 (280)
T 3nrc_A 95 VELGKVWDGLDAIVH-SIAF 113 (280)
T ss_dssp HHHHHHCSSCCEEEE-CCCC
T ss_pred HHHHHHcCCCCEEEE-CCcc
Confidence 777664 4787554 5554
No 471
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=79.46 E-value=2 Score=38.21 Aligned_cols=80 Identities=16% Similarity=0.116 Sum_probs=50.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCE-EEEecChhhHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANA-SAIYVPPPFAAAAILEA 119 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDl-aii~vp~~~~~~~v~~~ 119 (331)
+..+|+|.|+++-+|+.+++.|.+.|++++ .++.+. +.. .+++.+. ++.. ..+.+.++.+.++++++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~--------~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVI-ISYRTE--HAS--------VTELRQA-GAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEE-EEESSC--CHH--------HHHHHHH-TCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCh--HHH--------HHHHHhc-CCeEEECCCCCHHHHHHHHHHH
Confidence 445578889999999999999999999977 554433 110 1222211 2222 22455667777777777
Q ss_pred HHc--CCcEEEEecCC
Q 020101 120 MEA--ELDLVVCITEG 133 (331)
Q Consensus 120 ~~~--Gi~~ivi~t~G 133 (331)
.+. ++..+|+ ..|
T Consensus 94 ~~~~g~iD~lv~-nAg 108 (260)
T 3gem_A 94 KTQTSSLRAVVH-NAS 108 (260)
T ss_dssp HHHCSCCSEEEE-CCC
T ss_pred HHhcCCCCEEEE-CCC
Confidence 665 5887664 444
No 472
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=79.31 E-value=0.67 Score=45.46 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEe
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGV 73 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~V 73 (331)
...+|+|.|++|-+|+.+++.|.+.|+++++.+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~ 181 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFI 181 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEE
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEE
Confidence 457899999999999999999977788888554
No 473
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=79.26 E-value=2.3 Score=39.30 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=49.5
Q ss_pred EEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCc-----ee------c--Ccccc--cCHHHhhhcCCCCEEEEec
Q 020101 44 RVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-----EH------L--GLPVF--NTVAEAKAETKANASAIYV 107 (331)
Q Consensus 44 ~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~-----~i------~--G~p~y--~sl~dl~~~~~iDlaii~v 107 (331)
||+|+|+ |.+|..++..+...++ +++ .+|.....- ++ . ...+. .+.+++ + +.|++|++.
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~-L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~-~--~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLL-LIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYEDM-R--GSDIVLVTA 75 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEE-EECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG-T--TCSEEEECC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEE-EEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHHHh-C--CCCEEEEeC
Confidence 4789999 9999888776665566 455 666544100 00 1 21222 345443 3 699999996
Q ss_pred Chhh----------------HHHHHHHHHHcCCcEEEEe
Q 020101 108 PPPF----------------AAAAILEAMEAELDLVVCI 130 (331)
Q Consensus 108 p~~~----------------~~~~v~~~~~~Gi~~ivi~ 130 (331)
+... ..++++++.+...+.++++
T Consensus 76 g~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv 114 (308)
T 2d4a_B 76 GIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVI 114 (308)
T ss_dssp SCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 5443 6677777777666654433
No 474
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=79.19 E-value=4.8 Score=37.59 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=53.5
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCC-ceecCcccccCHHHhhhcCCCCEE---EEecChhhHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG-TEHLGLPVFNTVAEAKAETKANAS---AIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g-~~i~G~p~y~sl~dl~~~~~iDla---ii~vp~~~~~~~v 116 (331)
+...|+|.|+++.+|+.+.+.|.+.|++++ .++.+... ++..+ .++...+++.. ...++. .+.+..+.+.+++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vv-l~~r~~~~~~~l~~-~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIV-IAAKTAQPHPKLLG-TIYTAAEEIEA-VGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEE-EEESCCSCCSSSCC-CHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEE-EEECChhhhhhhHH-HHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHH
Confidence 445678899999999999999999999976 44333210 11111 11222233322 122222 3556777788888
Q ss_pred HHHHHc--CCcEEEEecCC
Q 020101 117 LEAMEA--ELDLVVCITEG 133 (331)
Q Consensus 117 ~~~~~~--Gi~~ivi~t~G 133 (331)
+++.+. ++..+|+ ..|
T Consensus 121 ~~~~~~~g~iDilVn-nAG 138 (346)
T 3kvo_A 121 EKAIKKFGGIDILVN-NAS 138 (346)
T ss_dssp HHHHHHHSCCCEEEE-CCC
T ss_pred HHHHHHcCCCCEEEE-CCC
Confidence 888775 7888665 444
No 475
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=78.91 E-value=4.8 Score=35.28 Aligned_cols=82 Identities=21% Similarity=0.146 Sum_probs=48.5
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE-EEecChhhHHHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS-AIYVPPPFAAAAILEAM 120 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla-ii~vp~~~~~~~v~~~~ 120 (331)
...++|.|+++-+|+.+.+.|.+.|++++ .++.+. +... ...+++.. ++... .+.+..+.+.+.++++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~r~~--~~~~-----~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVL-GLDLKP--PAGE-----EPAAELGA--AVRFRNADVTNEADATAALAFAK 76 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEESSC--C-------------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeCCh--HHHH-----HHHHHhCC--ceEEEEccCCCHHHHHHHHHHHH
Confidence 45577899999999999999999999976 444332 1100 01112211 22222 24566677777777776
Q ss_pred Hc--CCcEEEEecCCC
Q 020101 121 EA--ELDLVVCITEGI 134 (331)
Q Consensus 121 ~~--Gi~~ivi~t~G~ 134 (331)
+. ++..+|+ ..|.
T Consensus 77 ~~~g~id~lv~-nAg~ 91 (257)
T 3tpc_A 77 QEFGHVHGLVN-CAGT 91 (257)
T ss_dssp HHHSCCCEEEE-CCCC
T ss_pred HHcCCCCEEEE-CCCC
Confidence 65 6887664 4443
No 476
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=78.91 E-value=3.1 Score=39.44 Aligned_cols=88 Identities=14% Similarity=0.118 Sum_probs=58.1
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-CCeEEEEeCCCCC--------------Cc---e---------ecC--ccccc--
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKG--------------GT---E---------HLG--LPVFN-- 89 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g~~iv~~VnP~~~--------------g~---~---------i~G--~p~y~-- 89 (331)
..+||+|-|. |++|+.+++.+.+. .+++++.-+|-.+ |. + +.| ++++.
T Consensus 10 ~~~kv~INGf-GrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~ 88 (345)
T 2b4r_O 10 AATKLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEK 88 (345)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCS
T ss_pred hheEEEEeCC-chHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcC
Confidence 3578887777 99999999988775 5788855554211 00 0 112 22332
Q ss_pred CHHHhhh-cCCCCEEEEecChhhHHHHHHHHHHcCCcEEEE
Q 020101 90 TVAEAKA-ETKANASAIYVPPPFAAAAILEAMEAELDLVVC 129 (331)
Q Consensus 90 sl~dl~~-~~~iDlaii~vp~~~~~~~v~~~~~~Gi~~ivi 129 (331)
+.++++- +.++|+++.+++.....+.+...++.|.+.+++
T Consensus 89 dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVI 129 (345)
T 2b4r_O 89 DPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIM 129 (345)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred CcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEE
Confidence 3344431 126899999998888888888888899988665
No 477
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=78.85 E-value=31 Score=30.04 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=38.0
Q ss_pred CCCEEEEecChHH------HHHHHHHHHhCCCCceE-EEecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCCcHHH
Q 020101 180 PGRIGIVSRSGTL------TYEAVFQTTAVGLGQST-CVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEED 252 (331)
Q Consensus 180 ~G~valisQSG~~------~~~~~~~~~~~g~g~s~-~vs~Gn~~~~~v~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~ 252 (331)
.++|++++..... ...+.+.+++.|+.+.. .+-.++.. .+-....+.++|...|...+|+..- ...
T Consensus 125 ~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~ai~~~~------d~~ 197 (291)
T 3egc_A 125 HTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVR-ADNGRDGAIKVLTGADRPTALLTSS------HRI 197 (291)
T ss_dssp CCSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC-------CCHHHHHHHHTC-CCCSEEEESS------HHH
T ss_pred CCEEEEEeCCCCCcCHHHHHHHHHHHHHHcCCCCCHHHeEeCCCC-hhHHHHHHHHHHhCCCCCcEEEECC------cHH
Confidence 3457777554321 12234556677776542 22223321 2455666777887888888876542 234
Q ss_pred HHHHHHHhC
Q 020101 253 AAALIKESG 261 (331)
Q Consensus 253 ~~~f~~a~r 261 (331)
+..++++++
T Consensus 198 a~g~~~al~ 206 (291)
T 3egc_A 198 TEGAMQALN 206 (291)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 445666654
No 478
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=78.76 E-value=4 Score=37.44 Aligned_cols=56 Identities=9% Similarity=0.052 Sum_probs=44.3
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~ 110 (331)
+..+++|+|+|+-.|+...+.|.+.|.++. .+|.+. .++++... +.|++|.+++..
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt-v~~~~t-----------~~L~~~~~--~ADIVI~Avg~p 204 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVS-VCHSKT-----------KDIGSMTR--SSKIVVVAVGRP 204 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTC-----------SCHHHHHH--HSSEEEECSSCT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEE-EEeCCc-----------ccHHHhhc--cCCEEEECCCCC
Confidence 456788999977899999999999999866 666432 45777776 689999999763
No 479
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=78.71 E-value=1.2 Score=42.30 Aligned_cols=83 Identities=14% Similarity=0.080 Sum_probs=53.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHc-C-CeEEEEeCCCCCCceecC--cccccCHHHhhhcCCCCEEEEecChhhHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEY-G-TKMVGGVTPKKGGTEHLG--LPVFNTVAEAKAETKANASAIYVPPPFAAAAI 116 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~-g-~~iv~~VnP~~~g~~i~G--~p~y~sl~dl~~~~~iDlaii~vp~~~~~~~v 116 (331)
...+|++.|| +.-|...++.+.-. . ...+.-.||...|..+.| +|+++ .+++.+ .++|.+++. ++....+++
T Consensus 318 ~gk~v~~yGa-~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~-p~~~~~-~~~d~vl~~-~~~~~~ei~ 393 (416)
T 4e2x_A 318 EGRSVVGYGA-TAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRP-ASAFSD-PYPDYALLF-AWNHAEEIM 393 (416)
T ss_dssp TTCCEEEECC-CSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEE-GGGCCS-SCCSEEEES-CGGGHHHHH
T ss_pred cCCeEEEEcc-ccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCC-HHHHhh-cCCCEEEEe-cchhHHHHH
Confidence 4567889999 55565555544321 1 222225788888888888 99997 445544 379998887 556666666
Q ss_pred HH---HHHcCCcEE
Q 020101 117 LE---AMEAELDLV 127 (331)
Q Consensus 117 ~~---~~~~Gi~~i 127 (331)
+. ..+.|-+-|
T Consensus 394 ~~~~~~~~~g~~~~ 407 (416)
T 4e2x_A 394 AKEQEFHQAGGRWI 407 (416)
T ss_dssp HHCHHHHHTTCEEE
T ss_pred HHHHHHHhcCCEEE
Confidence 54 346777753
No 480
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=78.70 E-value=2.1 Score=37.60 Aligned_cols=80 Identities=18% Similarity=0.104 Sum_probs=49.0
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEE---EecChhhHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlai---i~vp~~~~~~~v~~ 118 (331)
..+++|.|+++-+|+.+.+.|.+.|++++ .++.+. + .. ..+++.. ...++.. +.+.++.+.+.+++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~r~~--~----~~---~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~ 72 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIV-LNGFGD--P----AP---ALAEIAR-HGVKAVHHPADLSDVAQIEALFAL 72 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEE-EECSSC--C----HH---HHHHHHT-TSCCEEEECCCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEeCCc--h----HH---HHHHHHh-cCCceEEEeCCCCCHHHHHHHHHH
Confidence 34577889999999999999999999977 555433 1 01 1223321 1222222 34555666677766
Q ss_pred HHHc--CCcEEEEecCC
Q 020101 119 AMEA--ELDLVVCITEG 133 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G 133 (331)
+.+. ++..+++ ..|
T Consensus 73 ~~~~~g~id~lv~-~Ag 88 (255)
T 2q2v_A 73 AEREFGGVDILVN-NAG 88 (255)
T ss_dssp HHHHHSSCSEEEE-CCC
T ss_pred HHHHcCCCCEEEE-CCC
Confidence 6654 6888665 444
No 481
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=78.46 E-value=4.2 Score=37.78 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=43.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHH--HhhhcCCCCEEEEecChh
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVA--EAKAETKANASAIYVPPP 110 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~--dl~~~~~iDlaii~vp~~ 110 (331)
+..+++|+|+|+-.|+.+...|.+.|.++. .+|.+. . +++ +... +.|++|.+++..
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~~~~T--~---------~l~l~~~~~--~ADIVI~Avg~p 221 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVT-IVHSGT--S---------TEDMIDYLR--TADIVIAAMGQP 221 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTS--C---------HHHHHHHHH--TCSEEEECSCCT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeCCC--C---------Cchhhhhhc--cCCEEEECCCCC
Confidence 567789999977799999999999999865 677543 1 355 6666 789999999864
No 482
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=78.46 E-value=3.7 Score=35.84 Aligned_cols=82 Identities=15% Similarity=0.072 Sum_probs=48.0
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEE-EEecChhhHHHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANAS-AIYVPPPFAAAAILEA 119 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDla-ii~vp~~~~~~~v~~~ 119 (331)
+...|+|.|+++.+|+.+++.|.+.|++++ .++.+. +... ...+++.. ++..+ .+.+.++.+.+.++++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~-~~~r~~--~~~~-----~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~ 80 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAV-LLDLPN--SGGE-----AQAKKLGN--NCVFAPADVTSEKDVQTALALA 80 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEECTT--SSHH-----HHHHHHCT--TEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEeCCc--HhHH-----HHHHHhCC--ceEEEEcCCCCHHHHHHHHHHH
Confidence 345688999999999999999999999977 444332 1100 00122211 22221 2344556666666666
Q ss_pred HHc--CCcEEEEecCC
Q 020101 120 MEA--ELDLVVCITEG 133 (331)
Q Consensus 120 ~~~--Gi~~ivi~t~G 133 (331)
.+. ++..+|. ..|
T Consensus 81 ~~~~g~id~li~-~Ag 95 (265)
T 2o23_A 81 KGKFGRVDVAVN-CAG 95 (265)
T ss_dssp HHHHSCCCEEEE-CCC
T ss_pred HHHCCCCCEEEE-CCc
Confidence 543 6887654 444
No 483
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=78.42 E-value=1.8 Score=38.52 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=49.8
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEE---EecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlai---i~vp~~~~~~~v~ 117 (331)
+..+|+|.|+++.+|+.+++.|.+.|++++ .++.+. .+. -..+.+..++...++.+ +.+..+.+.+.++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 99 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVW-INYRSN--AEV-----ADALKNELEEKGYKAAVIKFDAASESDFIEAIQ 99 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEESSC--HHH-----HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeCCC--HHH-----HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 345678899999999999999999999977 443322 110 01111211111223322 3455666677777
Q ss_pred HHHHc--CCcEEEEecCCC
Q 020101 118 EAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 118 ~~~~~--Gi~~ivi~t~G~ 134 (331)
++.+. ++..+|. ..|.
T Consensus 100 ~~~~~~g~id~li~-nAg~ 117 (271)
T 4iin_A 100 TIVQSDGGLSYLVN-NAGV 117 (271)
T ss_dssp HHHHHHSSCCEEEE-CCCC
T ss_pred HHHHhcCCCCEEEE-CCCc
Confidence 76654 5787554 4453
No 484
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=78.35 E-value=1.4 Score=40.43 Aligned_cols=68 Identities=13% Similarity=0.089 Sum_probs=45.4
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCe-EEEEeCCCCCC-cee----c----C--ccccc--CHHHhhhcCCCCEEEE
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTK-MVGGVTPKKGG-TEH----L----G--LPVFN--TVAEAKAETKANASAI 105 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~-iv~~VnP~~~g-~~i----~----G--~p~y~--sl~dl~~~~~iDlaii 105 (331)
.+..+++|+|+ |.+|+.+...|.+.|.+ ++ .+|.+... ++. . + +..++ ++++... +.|++|-
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~-i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~--~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQ-VADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIA--AADGVVN 200 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEE-EECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHH--HSSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHh--cCCEEEE
Confidence 34567889999 88999999999999985 55 88876421 111 0 1 11233 6666655 5799998
Q ss_pred ecChhh
Q 020101 106 YVPPPF 111 (331)
Q Consensus 106 ~vp~~~ 111 (331)
+||...
T Consensus 201 aTp~Gm 206 (283)
T 3jyo_A 201 ATPMGM 206 (283)
T ss_dssp CSSTTS
T ss_pred CCCCCC
Confidence 888543
No 485
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=78.28 E-value=1.5 Score=40.51 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=48.6
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCcee----cCccccc----CHHHhhhc--CCCCEEEEecChhh-
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH----LGLPVFN----TVAEAKAE--TKANASAIYVPPPF- 111 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i----~G~p~y~----sl~dl~~~--~~iDlaii~vp~~~- 111 (331)
.+|+|+|+ |+.|+.+++.|.+.|+ ++ .++.+. +.+ .|.+++. +.+.+.+. .+.|.++++++.+.
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~-vid~~~--~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~ 190 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FV-LAEDEN--VRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 190 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EE-EESCGG--GHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EE-EEeCCh--hhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH
Confidence 46899998 9999999999988888 65 777654 222 2444332 12222111 25788888887543
Q ss_pred HHHHHHHHHHcCCc
Q 020101 112 AAAAILEAMEAELD 125 (331)
Q Consensus 112 ~~~~v~~~~~~Gi~ 125 (331)
...++..+-+.+.+
T Consensus 191 n~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 191 TIHCILGIRKIDES 204 (336)
T ss_dssp HHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHCCC
Confidence 34445555566665
No 486
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=78.21 E-value=2.6 Score=36.99 Aligned_cols=84 Identities=6% Similarity=0.056 Sum_probs=50.4
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcC---CeEEEEeCCCCCCceecCcccccCHHHhhhc-CCCCEE-EEecChhhHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYG---TKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKANAS-AIYVPPPFAAAA 115 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g---~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~-~~iDla-ii~vp~~~~~~~ 115 (331)
+..+|+|.|+++.+|+.+++.|.+.| ++++ .++.+. +.. . .++++.+. .++... .+.+..+.+.++
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~-~~~r~~--~~~---~---~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 90 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLF-TTCRNR--EQA---K---ELEDLAKNHSNIHILEIDLRNFDAYDKL 90 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEE-EEESCT--TSC---H---HHHHHHHHCTTEEEEECCTTCGGGHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEE-EEecCh--hhh---H---HHHHhhccCCceEEEEecCCChHHHHHH
Confidence 34567889999999999999999998 8877 444333 111 1 13333221 122222 244556677777
Q ss_pred HHHHHHc----CCcEEEEecCCC
Q 020101 116 ILEAMEA----ELDLVVCITEGI 134 (331)
Q Consensus 116 v~~~~~~----Gi~~ivi~t~G~ 134 (331)
++++.+. ++..+|. ..|.
T Consensus 91 ~~~~~~~~g~~~id~li~-~Ag~ 112 (267)
T 1sny_A 91 VADIEGVTKDQGLNVLFN-NAGI 112 (267)
T ss_dssp HHHHHHHHGGGCCSEEEE-CCCC
T ss_pred HHHHHHhcCCCCccEEEE-CCCc
Confidence 7766553 6888664 4443
No 487
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=78.21 E-value=5.1 Score=35.55 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=48.7
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcC--CCCEE-EEecChhhHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAET--KANAS-AIYVPPPFAAAAILE 118 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~--~iDla-ii~vp~~~~~~~v~~ 118 (331)
..+|+|.|+++-+|+.+++.|.+.|++++ .++.+. +. ++++.++. .+..+ .+.+.++.+.+++++
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~r~~--~~---------~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 72 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVI-GTARRT--EA---------LDDLVAAYPDRAEAISLDVTDGERIDVVAAD 72 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEESSG--GG---------GHHHHHHCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEE-EEeCCH--HH---------HHHHHHhccCCceEEEeeCCCHHHHHHHHHH
Confidence 45677889999999999999999999977 444332 11 11221111 22222 245566677777776
Q ss_pred HHHc--CCcEEEEecCC
Q 020101 119 AMEA--ELDLVVCITEG 133 (331)
Q Consensus 119 ~~~~--Gi~~ivi~t~G 133 (331)
+.+. ++..++. ..|
T Consensus 73 ~~~~~g~id~lv~-~Ag 88 (281)
T 3m1a_A 73 VLARYGRVDVLVN-NAG 88 (281)
T ss_dssp HHHHHSCCSEEEE-CCC
T ss_pred HHHhCCCCCEEEE-CCC
Confidence 6654 6887664 444
No 488
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=78.20 E-value=4.3 Score=37.80 Aligned_cols=85 Identities=12% Similarity=0.042 Sum_probs=51.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCc-----eec--------Ccccc--cCHHHhhhcCCCCEEEE
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-----EHL--------GLPVF--NTVAEAKAETKANASAI 105 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~-----~i~--------G~p~y--~sl~dl~~~~~iDlaii 105 (331)
..||+|+|+ |.+|..+...+...+. +++ .+|.....- ++. ...+. .+.++ .+ +.|++|+
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~-l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a-~~--~aDvVIi 79 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKD-LE--NSDVVIV 79 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG-GT--TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHH-HC--CCCEEEE
Confidence 468999998 9999988888877766 755 666544200 111 12222 23333 33 6899999
Q ss_pred ecCh----------------hhHHHHHHHHHHcCCcEEEEec
Q 020101 106 YVPP----------------PFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 106 ~vp~----------------~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
+.+. ....++++.+.+...+.+++.-
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivv 121 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI 121 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 8532 2345566667777766544433
No 489
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=78.08 E-value=2.4 Score=37.09 Aligned_cols=65 Identities=14% Similarity=0.128 Sum_probs=48.8
Q ss_pred EEecCCCCCCCC---CHHHHHHHhhcCCCccEEEEEEccCCCcHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 020101 210 CVGIGGDPFNGT---NFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESG-TEKPIVAFIAGLTA 275 (331)
Q Consensus 210 ~vs~Gn~~~~~v---~~~d~l~~l~~Dp~T~~I~ly~E~~g~~~~~~~~f~~a~r-~~KPVvv~k~Grs~ 275 (331)
+|.+++..+ +- .+..-|.++..|+..+.|.+|+.+.|-....+.+....++ .++||+++..|...
T Consensus 29 iI~l~g~I~-~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~~I~~~i~~~~~~V~t~~~G~Aa 97 (203)
T 3qwd_A 29 IIMLGSQID-DNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAA 97 (203)
T ss_dssp EEEECSCBC-HHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred EEEEcCEEC-HHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCcEEEEeeeeh
Confidence 677777641 22 2334466778888899999999998777888888888887 77999999877644
No 490
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=78.03 E-value=1.3 Score=43.20 Aligned_cols=69 Identities=14% Similarity=0.009 Sum_probs=49.0
Q ss_pred CeEEEEEcCCCCCC---------cHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEEEecChhhH
Q 020101 42 NTRVICQGITGKNG---------TFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFA 112 (331)
Q Consensus 42 ~~~VaIvGasgk~G---------~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlaii~vp~~~~ 112 (331)
..+|+|.|.+-|.+ ..+++.|.+.|.++. ..||.....+..|.....++++..+ +.|++|+....+..
T Consensus 332 ~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~-~~DP~~~~~~~~~~~~~~~~~~~~~--~aD~iv~~~~~~~~ 408 (432)
T 3pid_A 332 PKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVI-IYEPVMQEDEFFNSRVVRDLNAFKQ--EADVIISNRMAEEL 408 (432)
T ss_dssp CSSEEEECC-----------CHHHHHHHHHHHTTCCEE-EECTTCCSSEETTEEECCCHHHHHH--HCSEEECSSCCGGG
T ss_pred CCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEE-EECCCCChhhcCCceEECCHHHHHh--cCCEEEECCCChHH
Confidence 34688899987765 345678888899877 7899875445778888889999887 78999987765543
Q ss_pred H
Q 020101 113 A 113 (331)
Q Consensus 113 ~ 113 (331)
.
T Consensus 409 ~ 409 (432)
T 3pid_A 409 A 409 (432)
T ss_dssp G
T ss_pred H
Confidence 3
No 491
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=77.70 E-value=5.8 Score=37.03 Aligned_cols=86 Identities=12% Similarity=-0.035 Sum_probs=51.9
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCC-eEEEEeCCCCCCc-----ee------c--Ccccc--cCHHHhhhcCCCCEEE
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGT-KMVGGVTPKKGGT-----EH------L--GLPVF--NTVAEAKAETKANASA 104 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~-~iv~~VnP~~~g~-----~i------~--G~p~y--~sl~dl~~~~~iDlai 104 (331)
+..||+|+|+ |.+|..+...+...|. +++ .+|.....- ++ . ...+. .+.++ .+ +.|++|
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~-L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a-~~--~aDiVI 80 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAA-IE--GADVVI 80 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGG-GT--TCSEEE
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCCeEE-EEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHH-HC--CCCEEE
Confidence 3468999999 9999998888887777 755 666544100 01 1 12222 34533 33 689999
Q ss_pred EecCh----------------hhHHHHHHHHHHcCCcEEEEec
Q 020101 105 IYVPP----------------PFAAAAILEAMEAELDLVVCIT 131 (331)
Q Consensus 105 i~vp~----------------~~~~~~v~~~~~~Gi~~ivi~t 131 (331)
++.+. ....++++.+.+.+.+.+++.-
T Consensus 81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivv 123 (324)
T 3gvi_A 81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI 123 (324)
T ss_dssp ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEec
Confidence 98631 2244556666677766544433
No 492
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=77.68 E-value=2.4 Score=37.93 Aligned_cols=85 Identities=14% Similarity=0.154 Sum_probs=50.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCC-EEEEecChhhHHHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKAN-ASAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iD-laii~vp~~~~~~~v~~~~ 120 (331)
...++|.|+++-+|+.+++.|.+.|++++ .++.+. +... .....+.+... ++. +..+.+.++.+.++++++.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~r~~--~~~~--~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVI-GTATTE--AGAE--GIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEESSH--HHHH--HHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeCCH--HHHH--HHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHH
Confidence 34577889999999999999999999977 444432 1100 01111222111 222 2235566677777777776
Q ss_pred Hc--CCcEEEEecCCC
Q 020101 121 EA--ELDLVVCITEGI 134 (331)
Q Consensus 121 ~~--Gi~~ivi~t~G~ 134 (331)
+. ++..+|+ ..|+
T Consensus 101 ~~~g~iD~lvn-nAg~ 115 (270)
T 3ftp_A 101 KEFGALNVLVN-NAGI 115 (270)
T ss_dssp HHHSCCCEEEE-CCCC
T ss_pred HHcCCCCEEEE-CCCC
Confidence 64 5887654 4443
No 493
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=77.63 E-value=2.1 Score=41.99 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=29.5
Q ss_pred CCCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCC
Q 020101 40 DKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTP 75 (331)
Q Consensus 40 ~k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP 75 (331)
.+..+|+|.|. |+.|+..++.|.+.|.++++..|.
T Consensus 233 l~g~~vaVqGf-GnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 233 VEGARVAIQGF-GNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECS
T ss_pred ccCCEEEEecc-CHHHHHHHHHHHHCCCEEEEEEcC
Confidence 35678999997 999999999999999999876544
No 494
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=77.47 E-value=1.5 Score=40.06 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=60.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCc-ee--cCcccccCHHHhhhcCCCCEEEEecChhhH------
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT-EH--LGLPVFNTVAEAKAETKANASAIYVPPPFA------ 112 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~-~i--~G~p~y~sl~dl~~~~~iDlaii~vp~~~~------ 112 (331)
..+|+|+|+ |.+|+.++..|.+.|.+++ .+|.+.... +. .|..+. +++++. +.|++|-+||....
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~-V~nRt~~ka~~la~~~~~~~-~~~~l~---~~DiVInaTp~Gm~~~~~l~ 191 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVS-VLNRSSRGLDFFQRLGCDCF-MEPPKS---AFDLIINATSASLHNELPLN 191 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSSCTTHHHHHHHTCEEE-SSCCSS---CCSEEEECCTTCCCCSCSSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHCCCeEe-cHHHhc---cCCEEEEcccCCCCCCCCCC
Confidence 567889999 9999999999999996665 888876321 11 232222 334443 58999999986532
Q ss_pred HHHHHHHHHcCCcEEEEecCCCChhHHHHHHHHHhccCCcEEE
Q 020101 113 AAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLV 155 (331)
Q Consensus 113 ~~~v~~~~~~Gi~~ivi~t~G~~e~~~~~l~~~a~~~~gi~vi 155 (331)
.+.+.+.+..+ ..++-+... ++.. +.+.| ++.|++++
T Consensus 192 ~~~l~~~l~~~-~~v~D~vY~-P~T~---ll~~A-~~~G~~~~ 228 (269)
T 3phh_A 192 KEVLKGYFKEG-KLAYDLAYG-FLTP---FLSLA-KELKTPFQ 228 (269)
T ss_dssp HHHHHHHHHHC-SEEEESCCS-SCCH---HHHHH-HHTTCCEE
T ss_pred hHHHHhhCCCC-CEEEEeCCC-CchH---HHHHH-HHCcCEEE
Confidence 22233344443 222333332 2222 44455 67777655
No 495
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=77.39 E-value=8.2 Score=33.48 Aligned_cols=84 Identities=20% Similarity=0.166 Sum_probs=50.2
Q ss_pred CCeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCE---EEEecChhhHHHHHH
Q 020101 41 KNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANA---SAIYVPPPFAAAAIL 117 (331)
Q Consensus 41 k~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDl---aii~vp~~~~~~~v~ 117 (331)
+...|+|.|+++.+|+.+++.|.+.|++++ .++.+. +.. ... .+++.+. ..++ ..+.+.++.+.+.++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~-~~~r~~--~~~--~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVV-VADINA--EAA--EAV---AKQIVAD-GGTAISVAVDVSDPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHH--HHH---HHHHHHT-TCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEcCCH--HHH--HHH---HHHHHhc-CCcEEEEEccCCCHHHHHHHHH
Confidence 345678899999999999999999999976 555432 110 001 1222111 1222 224456666777777
Q ss_pred HHHHc--CCcEEEEecCCC
Q 020101 118 EAMEA--ELDLVVCITEGI 134 (331)
Q Consensus 118 ~~~~~--Gi~~ivi~t~G~ 134 (331)
++.+. ++..+|. ..|.
T Consensus 79 ~~~~~~g~id~li~-~Ag~ 96 (253)
T 3qiv_A 79 RTLAEFGGIDYLVN-NAAI 96 (253)
T ss_dssp HHHHHHSCCCEEEE-CCCC
T ss_pred HHHHHcCCCCEEEE-CCCc
Confidence 66654 6887654 4554
No 496
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=77.31 E-value=3.5 Score=37.01 Aligned_cols=87 Identities=16% Similarity=0.177 Sum_probs=51.4
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCc--ccccCHHHhhhcCCCCEEE---EecChhhHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGL--PVFNTVAEAKAETKANASA---IYVPPPFAAAAI 116 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~--p~y~sl~dl~~~~~iDlai---i~vp~~~~~~~v 116 (331)
...++|.|+++.+|+.+.+.|.+.|++++ .++.+. +..... ......+++... ..++.. +.+.++.+.+.+
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVA-LVAKSA--EPHPKLPGTIYTAAKEIEEA-GGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEE-EEESCC--SCCSSSCCCHHHHHHHHHHH-TSEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEECCh--hhhhhhhHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHH
Confidence 45578899999999999999999999976 444333 111111 011112222211 222222 455667777778
Q ss_pred HHHHHc--CCcEEEEecCC
Q 020101 117 LEAMEA--ELDLVVCITEG 133 (331)
Q Consensus 117 ~~~~~~--Gi~~ivi~t~G 133 (331)
+++.+. ++..+|+ ..|
T Consensus 85 ~~~~~~~g~id~lvn-nAg 102 (285)
T 3sc4_A 85 AKTVEQFGGIDICVN-NAS 102 (285)
T ss_dssp HHHHHHHSCCSEEEE-CCC
T ss_pred HHHHHHcCCCCEEEE-CCC
Confidence 777665 6888664 444
No 497
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=77.19 E-value=5.6 Score=35.24 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=46.1
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCE-EEEecChhhHHHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANA-SAIYVPPPFAAAAILEAM 120 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDl-aii~vp~~~~~~~v~~~~ 120 (331)
...|+|.|+++.+|+.+.+.|.+.|++++ .++.+. +. + . ++.. ..+.+.++.+.+.++++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~~--~~--~-----------~--~~~~~~~Dl~~~~~v~~~~~~~~ 69 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVI-DLSIHD--PG--E-----------A--KYDHIECDVTNPDQVKASIDHIF 69 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESSC--CC--S-----------C--SSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEecCc--cc--C-----------C--ceEEEEecCCCHHHHHHHHHHHH
Confidence 35578899999999999999999999977 444332 11 1 0 1111 123445566666666665
Q ss_pred Hc--CCcEEEEecCC
Q 020101 121 EA--ELDLVVCITEG 133 (331)
Q Consensus 121 ~~--Gi~~ivi~t~G 133 (331)
+. ++..+|+ ..|
T Consensus 70 ~~~g~iD~lv~-~Ag 83 (264)
T 2dtx_A 70 KEYGSISVLVN-NAG 83 (264)
T ss_dssp HHHSCCCEEEE-CCC
T ss_pred HHcCCCCEEEE-CCC
Confidence 53 5887664 444
No 498
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=77.12 E-value=1.8 Score=36.27 Aligned_cols=32 Identities=13% Similarity=0.227 Sum_probs=26.5
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCC
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPK 76 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~ 76 (331)
++|+|.|++|.+|+.+.+.|. .|++++ .++.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~-~~~r~ 35 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVI-TAGRH 35 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEE-EEESS
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEE-EEecC
Confidence 368899999999999999998 899977 55443
No 499
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=76.94 E-value=2.3 Score=37.81 Aligned_cols=84 Identities=13% Similarity=0.080 Sum_probs=49.2
Q ss_pred CeEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhc-CCCCEE-EEecChhhHHHHHHHH
Q 020101 42 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAE-TKANAS-AIYVPPPFAAAAILEA 119 (331)
Q Consensus 42 ~~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~-~~iDla-ii~vp~~~~~~~v~~~ 119 (331)
..+|+|.|+++.+|+.+++.|.+.|++++ .++.+. +... .. .+++.+. .++..+ .+.+.++.+.+.++++
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~-~~~r~~--~~~~--~~---~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLV-LWDINK--HGLE--ET---AAKCKGLGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCH--HHHH--HH---HHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEE-EEEcCH--HHHH--HH---HHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 45688999999999999999999999977 444332 1110 11 1222111 012222 2445566667777766
Q ss_pred HHc--CCcEEEEecCCC
Q 020101 120 MEA--ELDLVVCITEGI 134 (331)
Q Consensus 120 ~~~--Gi~~ivi~t~G~ 134 (331)
.+. ++..+|. ..|+
T Consensus 103 ~~~~g~iD~li~-~Ag~ 118 (272)
T 1yb1_A 103 KAEIGDVSILVN-NAGV 118 (272)
T ss_dssp HHHTCCCSEEEE-CCCC
T ss_pred HHHCCCCcEEEE-CCCc
Confidence 553 5887664 4443
No 500
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=76.84 E-value=3.7 Score=35.34 Aligned_cols=83 Identities=12% Similarity=0.050 Sum_probs=49.0
Q ss_pred eEEEEEcCCCCCCcHHHHHHHHcCCeEEEEeCCCCCCceecCcccccCHHHhhhcCCCCEEE---EecChhhHHHHHHHH
Q 020101 43 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASA---IYVPPPFAAAAILEA 119 (331)
Q Consensus 43 ~~VaIvGasgk~G~~~~~~l~~~g~~iv~~VnP~~~g~~i~G~p~y~sl~dl~~~~~iDlai---i~vp~~~~~~~v~~~ 119 (331)
..++|.|+++.+|+.+.+.|.+.|++++ .++.+. +.. -...+++..+...++.. +.+.++.+.+.++++
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~-~~~r~~--~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALA-LGARSV--DRL-----EKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKV 74 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEE-EEESCH--HHH-----HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-H
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeCCH--HHH-----HHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHH
Confidence 4577899999999999999999999976 544432 110 01122222111223322 455666777777666
Q ss_pred HHc--CCcEEEEecCCC
Q 020101 120 MEA--ELDLVVCITEGI 134 (331)
Q Consensus 120 ~~~--Gi~~ivi~t~G~ 134 (331)
.+. ++..+|+ ..|+
T Consensus 75 ~~~~g~id~li~-~Ag~ 90 (235)
T 3l77_A 75 LERFGDVDVVVA-NAGL 90 (235)
T ss_dssp HHHHSSCSEEEE-CCCC
T ss_pred HHhcCCCCEEEE-CCcc
Confidence 654 6887554 5554
Done!