BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020102
(331 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 157/287 (54%), Gaps = 36/287 (12%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKK---------------------- 87
+L++ATN+F+ ++G G G VYKG+ DG +A+K+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 88 -SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFP---LTWEMRLRIATEV 143
+ V L+G C E +L+Y+++ NG L +HL+ + P ++WE RL I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEICIGA 148
Query: 144 AGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTF 202
A L YLH+ A I HRD+KS NILLDE + K+ DFG SK +DQTH+ ++GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 203 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
GY+DPEY +LT+KSDVYSFGVVL E+L + I + +E V+LA + V S
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVESHNNG 263
Query: 263 RLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMEL 309
+L I+D + + + F + A +CL L+ + RP+M +V +L
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 36/287 (12%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKK---------------------- 87
+L++ATN+F+ ++G G G VYKG+ DG +A+K+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 88 -SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFP---LTWEMRLRIATEV 143
+ V L+G C E +L+Y+++ NG L +HL+ + P ++WE RL I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEICIGA 148
Query: 144 AGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTF 202
A L YLH+ A I HRD+KS NILLDE + K+ DFG SK + QTH+ ++GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 203 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
GY+DPEY +LT+KSDVYSFGVVL E+L + I + +E V+LA + V S
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVESHNNG 263
Query: 263 RLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMEL 309
+L I+D + + + F + A +CL L+ + RP+M +V +L
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 164/314 (52%), Gaps = 29/314 (9%)
Query: 40 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSK---------- 89
+ + K FS +EL A+++F+ ILG+GG G VYKG DG ++AVK+ K
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 90 --------------NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEM 135
N ++L G C+ LLVY +++NG++ L +R ++Q PL W
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPK 140
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 195
R RIA A LAYLH I HRD+K+ NILLDE + A V DFG +K + HV
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 196 TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
++GT G++ PEY + + ++K+DV+ +GV+L+EL+TG++ A + ++V L +
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGI--- 312
+++ +L ++D + K ++ +A C + +RP M EV L G
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
Query: 313 -RGSSRKKRAMFSK 325
R +K MF +
Sbjct: 321 ERWEEWQKEEMFRQ 334
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 40 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSK---------- 89
+ + K FS +EL A+++F ILG+GG G VYKG DG ++AVK+ K
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 90 --------------NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEM 135
N ++L G C+ LLVY +++NG++ L +R ++Q PL W
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPK 132
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 195
R RIA A LAYLH I HRD+K+ NILLDE + A V DFG +K + HV
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 196 TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
++G G++ PEY + + ++K+DV+ +GV+L+EL+TG++ A + ++V L +
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGI--- 312
+++ +L ++D + K ++ +A C + +RP M EV L G
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
Query: 313 -RGSSRKKRAMFSK 325
R +K MF +
Sbjct: 313 ERWEEWQKEEMFRQ 326
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 149/308 (48%), Gaps = 53/308 (17%)
Query: 46 FSSKELDKATNHFNVNRI------LGQGGQGTVYKG------------------------ 75
FS EL TN+F+ I +G+GG G VYKG
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 76 --MREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ--NQEFPL 131
++ +++A + +N V+LLG + + LVY ++ NG+L DRL + PL
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL----DRLSCLDGTPPL 130
Query: 132 TWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFI 187
+W MR +IA A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 188 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
QT + ++I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 188 ---QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREP 240
Query: 248 NVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSM 307
+ L + + D +D + M + A ++A +CL KRP +++V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 308 ELNGIRGS 315
L + S
Sbjct: 300 LLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 148/308 (48%), Gaps = 53/308 (17%)
Query: 46 FSSKELDKATNHFNVNRI------LGQGGQGTVYKG------------------------ 75
FS EL TN+F+ I +G+GG G VYKG
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 76 --MREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ--NQEFPL 131
++ +++A + +N V+LLG + + LVY ++ NG+L DRL + PL
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL----DRLSCLDGTPPL 130
Query: 132 TWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFI 187
+W MR +IA A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 188 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
QT + +I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 188 ---QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREP 240
Query: 248 NVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSM 307
+ L + + D +D + M + A ++A +CL KRP +++V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 308 ELNGIRGS 315
L + S
Sbjct: 300 LLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 53/308 (17%)
Query: 46 FSSKELDKATNHFNVNRI------LGQGGQGTVYKG------------------------ 75
FS EL TN+F+ I +G+GG G VYKG
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 76 --MREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ--NQEFPL 131
++ +++A + +N V+LLG + + LVY ++ NG+L DRL + PL
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL----DRLSCLDGTPPL 124
Query: 132 TWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFI 187
+W MR +IA A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 188 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
Q + +I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 182 ---QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREP 234
Query: 248 NVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSM 307
+ L + + D +D + M + A ++A +CL KRP +++V
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
Query: 308 ELNGIRGS 315
L + S
Sbjct: 294 LLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 139/303 (45%), Gaps = 55/303 (18%)
Query: 46 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGMREDGRIIAVKK------------ 87
FS EL TN+F+ I G+GG G VYKG + +AVKK
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 88 ---------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ--NQEFP 130
+N V+LLG + + LVY + NG+L DRL + P
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLL----DRLSCLDGTPP 120
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKF 186
L+W R +IA A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 187 IAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
Q ++I GT Y PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 178 A---QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHRE 230
Query: 247 ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVS 306
+ L + + D +D + + A ++A +CL KRP +++V
Sbjct: 231 PQLLLDIKEEIEDEEKTIEDYIDKKXND-ADSTSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 307 MEL 309
L
Sbjct: 290 QLL 292
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 68/297 (22%)
Query: 54 ATNHFNVNRILGQGGQGTVYKG-MREDGRIIAVK-------------------------- 86
A N + +G+GG G V+KG + +D ++A+K
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 87 ----KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATE 142
N VKL G L P +V EF+ G LY L D+ P+ W ++LR+ +
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLD 130
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNILL---DERYR--AKVADFGTSKFIAMDQTHVTTK 197
+A + Y+ + + PI HRD++S NI L DE AKVADFGTS+ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 198 IQGTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSAGNTSQENVSLAA 253
+ G F ++ PE + T+K+D YSF ++L +LTG+ P +S G
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELN 310
F++ +R+ L + + N+ E C + KKRP + EL+
Sbjct: 238 -FINMIREEGLRPTIPEDCPP--------RLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 35/232 (15%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVK----------------------- 86
++D N+ +G G GTV++ G +AVK
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 87 --KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+ N V +G + +V E++S G+LY+ LH ++ L RL +A +VA
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVA 147
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFG 203
+ YLH+ + PI HR++KS N+L+D++Y KV DFG S+ A T +++K GT
Sbjct: 148 KGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPE 204
Query: 204 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
++ PE + +KSDVYSFGV+L EL T ++P GN + V A F
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVGF 253
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 68/297 (22%)
Query: 54 ATNHFNVNRILGQGGQGTVYKG-MREDGRIIAVK-------------------------- 86
A N + +G+GG G V+KG + +D ++A+K
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 87 ----KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATE 142
N VKL G L P +V EF+ G LY L D+ P+ W ++LR+ +
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLD 130
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNILL---DERYR--AKVADFGTSKFIAMDQTHVTTK 197
+A + Y+ + + PI HRD++S NI L DE AKVADFG S+ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 198 IQGTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSAGNTSQENVSLAA 253
+ G F ++ PE + T+K+D YSF ++L +LTG+ P +S G
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELN 310
F++ +R+ L + + N+ E C + KKRP + EL+
Sbjct: 238 -FINMIREEGLRPTIPEDCPP--------RLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 33/231 (14%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVK----------------------- 86
++D N+ +G G GTV++ G +AVK
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 87 --KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+ N V +G + +V E++S G+LY+ LH ++ L RL +A +VA
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVA 147
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 204
+ YLH+ + PI HRD+KS N+L+D++Y KV DFG S+ A + GT +
Sbjct: 148 KGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTPEW 205
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
+ PE + +KSDVYSFGV+L EL T ++P GN + V A F
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVGF 253
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 66/299 (22%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKG--------------------------MREDGRII 83
E+D A + I+G GG G VY+ +R++ ++
Sbjct: 3 EIDFA--ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 84 AVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEV 143
A+ K N + L G CL+ LV EF G L + L + + + W A ++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQI 114
Query: 144 AGALAYLHSAASSPIYHRDIKSTNILLDERYR--------AKVADFGTSKFIAMDQTHVT 195
A + YLH A PI HRD+KS+NIL+ ++ K+ DFG ++ + H T
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRT 169
Query: 196 TKIQ--GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
TK+ G + ++ PE ++S + SDV+S+GV+L ELLTG+ P + +++A
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-----RGIDGLAVA- 223
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGI 312
+ + N+L + + FA L E C + + RP+ + +L I
Sbjct: 224 ---YGVAMNKLALPIPSTCPE--------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 128/297 (43%), Gaps = 68/297 (22%)
Query: 54 ATNHFNVNRILGQGGQGTVYKG-MREDGRIIAVK-------------------------- 86
A N + +G+GG G V+KG + +D ++A+K
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 87 ----KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATE 142
N VKL G L P +V EF+ G LY L D+ P+ W ++LR+ +
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLD 130
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNILL---DERYR--AKVADFGTSKFIAMDQTHVTTK 197
+A + Y+ + + PI HRD++S NI L DE AKVADF S+ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 198 IQGTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSAGNTSQENVSLAA 253
+ G F ++ PE + T+K+D YSF ++L +LTG+ P +S G
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELN 310
F++ +R+ L + + N+ E C + KKRP + EL+
Sbjct: 238 -FINMIREEGLRPTIPEDCPP--------RLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 49/269 (18%)
Query: 60 VNRILGQGGQGTVYKGMREDGRIIAVKK---------------------SKNAVKLLGCC 98
V ++G+G G V K + + +A+K+ N VKL G C
Sbjct: 12 VEEVVGRGAFGVVCKA-KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPL-TWEMRLRIATEVAGALAYLHSAASSP 157
L LV E+ G+LY LH + P T + + + +AYLHS
Sbjct: 71 LNPVC--LVMEYAEGGSLYNVLHGA---EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+LL K+ DFGT+ I QTH+T +G+ ++ PE + S +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYS 181
Query: 217 DKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLG 276
+K DV+S+G++L E++T +KP G + + + VH+ + L
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTRPPLI----------- 226
Query: 277 KKNQIMAFANLAERCLDLNGKKRPTMEEV 305
KN +L RC + +RP+MEE+
Sbjct: 227 -KNLPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 49/271 (18%)
Query: 58 FNVNRILGQGGQGTVYKGMREDGRIIAVKK---------------------SKNAVKLLG 96
V ++G+G G V K + + +A+K+ N VKL G
Sbjct: 11 IEVEEVVGRGAFGVVCKA-KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPL-TWEMRLRIATEVAGALAYLHSAAS 155
CL LV E+ G+LY LH + P T + + + +AYLHS
Sbjct: 70 ACLNPVC--LVMEYAEGGSLYNVLHGA---EPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 156 SPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
+ HRD+K N+LL K+ DFGT+ I QTH+T +G+ ++ PE + S
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSN 180
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMK 274
++K DV+S+G++L E++T +KP G + + + VH+ + L
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTRPPLI--------- 227
Query: 275 LGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
KN +L RC + +RP+MEE+
Sbjct: 228 ---KNLPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ ++ V+L G CLE LV+EF+ +G L D L+ Q E L
Sbjct: 51 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQRGLFAAETLL 106
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ +V +AYL A+ + HRD+ + N L+ E KV+DFG ++F+ DQ +T
Sbjct: 107 GMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
+ + PE S+ + KSDV+SFGV++ E +FS G EN S
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENRS 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ ++ V+L G CLE LV+EF+ +G L D L+ Q E L
Sbjct: 71 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQRGLFAAETLL 126
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ +V +AYL A + HRD+ + N L+ E KV+DFG ++F+ DQ +T
Sbjct: 127 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
+ + PE S+ + KSDV+SFGV++ E +FS G EN S
Sbjct: 184 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENRS 229
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ ++ V+L G CLE LV+EF+ +G L D L+ Q E L
Sbjct: 54 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQRGLFAAETLL 109
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ +V +AYL A + HRD+ + N L+ E KV+DFG ++F+ DQ +T
Sbjct: 110 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
+ + PE S+ + KSDV+SFGV++ E +FS G EN S
Sbjct: 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENRS 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ ++ V+L G CLE LV+EF+ +G L D L+ Q E L
Sbjct: 49 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQRGLFAAETLL 104
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ +V +AYL A + HRD+ + N L+ E KV+DFG ++F+ DQ +T
Sbjct: 105 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
+ + PE S+ + KSDV+SFGV++ E +FS G EN S
Sbjct: 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENRS 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ ++ V+L G CLE LV+EF+ +G L D L+ Q E L
Sbjct: 51 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQRGLFAAETLL 106
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ +V +AYL A + HRD+ + N L+ E KV+DFG ++F+ DQ +T
Sbjct: 107 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
+ + PE S+ + KSDV+SFGV++ E +FS G EN S
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENRS 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 146
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 144
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 38 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 151
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 152 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 255
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 147
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 146
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 147
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 92 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 205
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + +
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ ++ V+L G CLE LV EF+ +G L D L+ Q E L
Sbjct: 52 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL----SDYLRTQRGLFAAETLL 107
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ +V +AYL A + HRD+ + N L+ E KV+DFG ++F+ DQ +T
Sbjct: 108 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
+ + PE S+ + KSDV+SFGV++ E +FS G EN S
Sbjct: 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENRS 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+AV + A G +P +V E++ TL +H E P+T + + +
Sbjct: 74 IVAVYDTGEAETPAG-----PLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIA 123
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
+ AL + H I HRD+K NIL+ KV DFG ++ IA V T +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH-- 257
GT YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVRED 235
Query: 258 ----SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
S R L LD V+K KN + AE DL
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 145
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + H T + +
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 249
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 143
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 144 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+AV + A G +P +V E++ TL +H E P+T + + +
Sbjct: 74 IVAVYDTGEAETPAG-----PLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIA 123
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 199
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH-- 257
GT YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVRED 235
Query: 258 ----SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
S R L LD V+K KN + AE DL
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+AV + A G +P +V E++ TL +H E P+T + + +
Sbjct: 74 IVAVYATGEAETPAG-----PLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIA 123
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 199
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH-- 257
GT YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVRED 235
Query: 258 ----SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
S R L LD V+K KN + AE DL
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 51 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 164
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 165 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 268
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 25 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 139 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 242
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+AV + A G +P +V E++ TL +H E P+T + + +
Sbjct: 74 IVAVYDTGEAETPAG-----PLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIA 123
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 199
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH-- 257
GT YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVRED 235
Query: 258 ----SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
S R L LD V+K KN + AE DL
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 146
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 52 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 165
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 269
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+AV + A G +P +V E++ TL +H E P+T + + +
Sbjct: 91 IVAVYDTGEAETPAG-----PLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIA 140
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 199
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 141 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH-- 257
GT YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVRED 252
Query: 258 ----SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
S R L LD V+K KN + AE DL
Sbjct: 253 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 146
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 145
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 249
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 144
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 145 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 57 HFNVNRILGQGGQGTVYKG--MREDGRII--AVKK------------------------S 88
HFN ++G+G G VY G + DG+ I AVK
Sbjct: 28 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 89 KNAVKLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N + LLG CL +E PL+V ++ +G L + + N T + + +VA +
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGM 141
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGY 204
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + +
Sbjct: 142 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 121/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 171
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 269
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 171
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 269
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 121/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 119
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCG 173
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 119
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 173
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 271
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 121/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 115
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 116 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCG 169
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 218
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 219 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 267
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+AV + A G +P +V E++ TL +H E P+T + + +
Sbjct: 74 IVAVYDTGEAETPAG-----PLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIA 123
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 199
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH-- 257
GT YL PE + + +SDVYS G VL E+LTG+ P T S+A V
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPDSVAYQHVRED 235
Query: 258 ----SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
S R L LD V+K KN + AE DL
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 121/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 119
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 173
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPXLREV-LEHPWITANSSK 271
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH E + + IA + A
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTA 118
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 119 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 85
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 140
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 141 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 194
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 243
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 244 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 292
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 118/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 121
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDYLP 175
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 224
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 225 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 17 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 76
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 77 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 131
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 132 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 185
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 234
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 235 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 283
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 122/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ G +Y+ L + E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----QRTATYI 119
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 173
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 271
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 120/292 (41%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P F A NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA-NTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 119/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T++ GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 118/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 119
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 120 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLP 173
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 222
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 223 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH E + + IA + A
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTA 130
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+
Sbjct: 131 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 118/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 120/292 (41%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 124
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLP 178
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P F A NT QE R +R+
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA-NTYQETYK---------RISRVEF 227
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 228 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 118/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 120/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCG 171
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 269
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 113/280 (40%), Gaps = 59/280 (21%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR--IIAVK------------------------- 86
A F + R LG+G G VY RE R I+A+K
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLA-REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 61
Query: 87 -KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELAN 116
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
AL+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 170
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLY 265
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVE 219
Query: 266 DILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
D V + + +L R L N +RP + EV
Sbjct: 220 FTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 251
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 121/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+A+FG S + T + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCG 171
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 269
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 118/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 123/298 (41%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 116
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+A+FG S + + TT + G
Sbjct: 117 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LCG 170
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 219
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 220 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 268
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 120/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 116
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 117 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCG 170
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 219
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 220 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 120/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 115
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 116 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCG 169
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 218
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 219 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 119/298 (39%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ G +Y+ L + E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----QRTATYI 119
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLXG 173
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 271
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 142
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 141
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 142 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 117/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 116
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 117 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 119
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 119/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY ++ + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G ++ L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 121 LSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P NT Q+ R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 119
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 119/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLP 174
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P F A NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA-NTYQETYK---------RISRVEF 223
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 266
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 142
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 119/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 123
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLP 177
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P F A NT QE R +R+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA-NTYQETYK---------RISRVEF 226
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 227 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 120/298 (40%), Gaps = 58/298 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------- 86
SK+ A F + R LG+G G VY + + I+A+K
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 85
Query: 87 ------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+ N ++L G + L+ E+ GT+Y+ L + E +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 140
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
TE+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 141 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCG 194
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 243
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
+R+ D V + + +L R L N +RP + EV +E I +S K
Sbjct: 244 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
SS + + V + +G G GTVYKG + +
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T+ L +V ++ +LY HLH + +F + + IA + A
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTA 134
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+
Sbjct: 135 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 119/292 (40%), Gaps = 58/292 (19%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-------------------------- 86
A F + R LG+G G VY + + I+A+K
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+ N ++L G + L+ E+ GT+Y+ L + E + TE+A A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 123
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLP 177
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + +K D++S GV+ E L GK P F A NT QE R +R+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEA-NTYQETYK---------RISRVEF 226
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
D V + + +L R L N +RP + EV +E I +S K
Sbjct: 227 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV-LEHPWITANSSK 269
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 77 REDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEF------- 129
+ + ++ + + ++ V+ G C E L+V+E++ +G L + L + +
Sbjct: 62 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 121
Query: 130 ---PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 186
PL L +A++VA + YL A HRD+ + N L+ + K+ DFG S+
Sbjct: 122 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 178
Query: 187 I-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNT 244
I + D V + ++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 179 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 77 REDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEF------- 129
+ + ++ + + ++ V+ G C E L+V+E++ +G L + L + +
Sbjct: 68 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 127
Query: 130 ---PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 186
PL L +A++VA + YL A HRD+ + N L+ + K+ DFG S+
Sbjct: 128 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 184
Query: 187 I-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNT 244
I + D V + ++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 185 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAV 85
++ + + V + +G G GTVYKG + +
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 86 KKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+K+++ LL T L +V ++ +LY HLH E + + IA + A
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTA 130
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFG 203
+ YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+
Sbjct: 131 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 204 YLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 77 REDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEF------- 129
+ + ++ + + ++ V+ G C E L+V+E++ +G L + L + +
Sbjct: 91 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150
Query: 130 ---PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 186
PL L +A++VA + YL A HRD+ + N L+ + K+ DFG S+
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 207
Query: 187 I-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNT 244
I + D V + ++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 208 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 23/236 (9%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N V ++ E + LV E+I TL +++ PL+ + + ++ +
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIK 125
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 208
+ H I HRDIK NIL+D K+ DFG +K ++ T + GT Y PE
Sbjct: 126 HAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDIL 268
+ + +D+YS G+VL E+L G+ P G T+ VS+A + N D+
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPPF--NGETA---VSIAIKHIQDSVPNVTTDV- 236
Query: 269 DDQVMKLGKKNQIMAFANLAERCLDLNGKKR-PTMEEVSMELNGIRGSSRKKRAMF 323
+K+ + +N+ R + + R T++E+ +L+ + +R ++
Sbjct: 237 --------RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVY 284
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 74 KGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ-------- 125
K + ++ + ++ VK G C+E + ++V+E++ +G L + L
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 126 NQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK 185
N LT L IA ++A + YL AS HRD+ + N L+ E K+ DFG S+
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
Query: 186 FI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ + D V ++ PE + T +SDV+S GVVL E+ T GK+P + N
Sbjct: 177 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLH 121
++L QG + + M + +I+ + V+L+G C + E +LV E G L++ L
Sbjct: 43 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 101
Query: 122 DRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADF 181
+ +E P++ + +V+ + YL HRD+ + N+LL R+ AK++DF
Sbjct: 102 GK--REEIPVS--NVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDF 154
Query: 182 GTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
G SK + D ++ T + G + + PE + + +SDV+S+GV + E L+ G+KP
Sbjct: 155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 57 HFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAVKKSKNAVKLL 95
V + +G G GTVYKG + ++K+++ LL
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 96 GCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
T+ L +V ++ +LY HLH + +F + + IA + A + YLH+ +
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTAQGMDYLHAKS 124
Query: 155 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFGYLDPEY---H 210
I HRD+KS NI L E K+ DFG + + +H ++ G+ ++ PE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 132
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQ-----------------VYELLEKDYRMERPEGC 235
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 57 HFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAVKKSKNAVKLL 95
V + +G G GTVYKG + ++K+++ LL
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 96 GCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
T L +V ++ +LY HLH + +F + + IA + A + YLH+ +
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTAQGMDYLHAKS 124
Query: 155 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFGYLDPEY---H 210
I HRD+KS NI L E K+ DFG + + +H ++ G+ ++ PE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 58/288 (20%)
Query: 58 FNVNRILGQGGQGTVYKGM-REDGRIIAVK--------------------------KSKN 90
F++ R LG+G G VY R+ I+A+K + N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 91 AVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
++L G + L+ E+ GT+Y+ L + E + TE+A AL+Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRTATYITELANALSYC 128
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS + HRDIK N+LL K+ADFG S + T + GT YL PE
Sbjct: 129 HSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMI 182
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDD 270
+ +K D++S GV+ E L G P F A +T QE R +R+ D
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP-FEA-HTYQETYR---------RISRVEFTFPD 231
Query: 271 QVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
V + + +L R L N +R T+ EV +E I+ +S K
Sbjct: 232 FVTEGAR--------DLISRLLKHNASQRLTLAEV-LEHPWIKANSSK 270
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 122
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 123 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS 177
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI--FSAGNTSQENVSL 251
+ + + PE S+ + KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Query: 252 AAYFVHSMRKNRLYDIL 268
+ + ++Y I+
Sbjct: 238 LRLYRPHLASEKVYTIM 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 53 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 107
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 108 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI--FSAGNTSQ 246
+ + + PE S+ + KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 163 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 52 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 106
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 107 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 161
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI--FSAGNTSQ 246
+ + + PE S+ + KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 162 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIA 140
+++ + N +K +G + + + E+I GTL + + + ++P W R+ A
Sbjct: 59 KVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYP--WSQRVSFA 114
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---- 196
++A +AYLHS I HRD+ S N L+ E VADFG ++ + ++T
Sbjct: 115 KDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 197 ---------KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
+ G ++ PE +K DV+SFG+VL E I N +
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE-------IIGRVNADPD 224
Query: 248 NVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSM 307
+ F ++R LD + N +F + RC DL+ +KRP+ ++
Sbjct: 225 YLPRTMDFGLNVR-----GFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275
Query: 308 ELNGIR 313
L +R
Sbjct: 276 WLETLR 281
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 48 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 102
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 103 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI--FSAGNTSQ 246
+ + + PE S+ + KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 54/277 (19%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLL----------------- 106
+G G GTVYKG + + K + EV +L
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 107 -----VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
V ++ +LY+HLH +Q +F + + IA + A + YLH+ I HR
Sbjct: 104 DNLAIVTQWCEGSSLYKHLH--VQETKFQMF--QLIDIARQTAQGMDYLHAKN---IIHR 156
Query: 162 DIKSTNILLDERYRAKVADFG----TSKFIAMDQTHVTTKIQGTFGYLDPEY---HQSSQ 214
D+KS NI L E K+ DFG S++ Q T G+ ++ PE ++
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDNNP 213
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMK 274
+ +SDVYS+G+VL EL+TG+ P +S N + + + S ++LY
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELP-YSHINNRDQIIFMVGRGYASPDLSKLY--------- 263
Query: 275 LGKKNQIMAFANLAERCLDLNGKKRPTMEEV--SMEL 309
KN A L C+ ++RP ++ S+EL
Sbjct: 264 ---KNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 56 NHFNVNRILGQGGQGTVY---KGMRED-GRIIAVKKSKNAVKLLGCCLETEV-------- 103
+HF + ++LGQG G V+ K R D G + A+K K A + + T++
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 104 --PLLV---YEFISNGTLY--------QHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
P +V Y F + G LY L RL + +++ +A E+A L +L
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALGLDHL 146
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS I +RD+K NILLDE K+ DFG SK A+D GT Y+ PE
Sbjct: 147 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
+ +D +S+GV++ E+LTG P G +E ++L
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPF--QGKDRKETMTL 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 57 HFNVNRILGQGGQGTVYKGMRE---------------------DGRIIAVKKSKNAVKLL 95
V + +G G GTVYKG + ++K+++ LL
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 96 GCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
T+ L +V ++ +LY HLH + +F + + IA + A + YLH+ +
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLH--IIETKFEMI--KLIDIARQTAQGMDYLHAKS 124
Query: 155 SSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDPEY---H 210
I HRD+KS NI L E K+ DFG ++ +H ++ G+ ++ PE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 122
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 123 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + + PE S+ + KSD+++FGV++ E+ + GK P
Sbjct: 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 59 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 113
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 114 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 168
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI--FSAGNTSQ 246
+ + + PE S+ + KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 169 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 58 FNVNRILGQGGQGTVYK-GMREDGRIIAVKKSKNAV------------------------ 92
F + R LG G G V+ R +GR A+K K +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 93 --KLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
++ G + + ++ ++I G L+ L ++Q FP + A EV AL YL
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNP--VAKFYAAEVCLALEYL 122
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS I +RD+K NILLD+ K+ DFG +K++ VT + GT Y+ PE
Sbjct: 123 HSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAPEVV 175
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ D +SFG+++ E+L G P + +
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 132
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQ-----------------VYELLEKDYRMERPEGC 235
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWE 134
E+ +++ + V+L G C + ++ E+++NG L +L + R Q Q+
Sbjct: 53 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL----- 107
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
L + +V A+ YL S HRD+ + N L++++ KV+DFG S+++ D+
Sbjct: 108 --LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI--FSAGNTSQ 246
+ + + PE S+ + KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 163 SRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 132
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQ-----------------VYELLEKDYRMERPEGC 235
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 136
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 239
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 135
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 238
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 135
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 238
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 134
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 237
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 134
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 237
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 74 KGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHL------------- 120
K + + ++ + ++ VK G C + + ++V+E++ +G L + L
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 121 HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 180
R E L+ L IA+++A + YL AS HRD+ + N L+ K+ D
Sbjct: 122 QPRQAKGELGLS--QMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGD 176
Query: 181 FGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI 238
FG S+ + + D V ++ PE + T +SDV+SFGV+L E+ T GK+P
Sbjct: 177 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 236
Query: 239 FSAGNT 244
F NT
Sbjct: 237 FQLSNT 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 134
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 237
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 134
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 237
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 139
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 242
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 139
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 242
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 134
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 237
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 139
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 242
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 134
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 237
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I A+ +N VK G E + L E+ S G L+ + + E R
Sbjct: 58 INAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFH 112
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQG 200
++ + YLH I HRDIK N+LLDER K++DFG + F ++ + K+ G
Sbjct: 113 QLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 201 TFGYLDPEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
T Y+ PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 136
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 239
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 147
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 208 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 250
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 251 PEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 136
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 239
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 139
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 242
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 138
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 241
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 139
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 242
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 94/219 (42%), Gaps = 40/219 (18%)
Query: 54 ATNHFNVNRILGQGGQGTVYKG-MREDGRIIAVKKSKNAVKL------------------ 94
++F R+LG+G G V ++E G + AVK K V L
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 95 --------LGCCLETEVPLL-VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI-ATEVA 144
L CC +T L V EF++ G L H+ +++ F E R R A E+
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRFD---EARARFYAAEII 134
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 204
AL +LH I +RD+K N+LLD K+ADFG K + T GT Y
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDY 190
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
+ PE Q D ++ GV+L E+L G P F A N
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP-FEAEN 228
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 117
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 118 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 52/267 (19%)
Query: 64 LGQGGQGTVYKGMR-EDGRIIAVK-----------------------KSKNAVKLLGCCL 99
+GQG GTVY M G+ +A++ K+ N V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
+ +V E+++ G+L + + ++ + E AL +LHS + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHS---NQVI 138
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRDIKS NILL K+ DFG I +Q+ +T + GT ++ PE K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
D++S G++ +E++ G+ P + EN A Y + + + +L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT-----------NGTPELQNPE 240
Query: 280 QIMA-FANLAERCLDLNGKKRPTMEEV 305
++ A F + RCLD++ +KR + +E+
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 119/288 (41%), Gaps = 58/288 (20%)
Query: 58 FNVNRILGQGGQGTVYKGM-REDGRIIAVK--------------------------KSKN 90
F++ R LG+G G VY R+ I+A+K + N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 91 AVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
++L G + L+ E+ GT+Y+ L + E + TE+A AL+Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRTATYITELANALSYC 128
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS + HRDIK N+LL K+ADFG S + + GT YL PE
Sbjct: 129 HSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEMI 182
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDD 270
+ +K D++S GV+ E L G P F A +T QE R +R+ D
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP-FEA-HTYQETYR---------RISRVEFTFPD 231
Query: 271 QVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRK 318
V + + +L R L N +R T+ EV +E I+ +S K
Sbjct: 232 FVTEGAR--------DLISRLLKHNASQRLTLAEV-LEHPWIKANSSK 270
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 118
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N VK G E + L E+ S G L+ + + E R ++ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVV 119
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLDP 207
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 208 EYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
E + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 39/237 (16%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLT 132
++ + ++ R + + N ++ GC L LV E+ D L+ + PL
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA-----SDLLEVHKKPLQ 152
Query: 133 WEMRLRIATEVAGAL---AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 189
+ IA GAL AYLHS + HRD+K+ NILL E K+ DFG++ +A
Sbjct: 153 ---EVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
Query: 190 DQTHVTTKIQGTFGYLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
V GT ++ PE Q K DV+S G+ +EL K P+F+ S
Sbjct: 207 ANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 261
Query: 247 ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTME 303
LY I ++ L + F N + CL + RPT E
Sbjct: 262 -----------------LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 301
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 39/237 (16%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLT 132
++ + ++ R + + N ++ GC L LV E+ D L+ + PL
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA-----SDLLEVHKKPLQ 113
Query: 133 WEMRLRIATEVAGAL---AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 189
+ IA GAL AYLHS + HRD+K+ NILL E K+ DFG++ +A
Sbjct: 114 ---EVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167
Query: 190 DQTHVTTKIQGTFGYLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
V GT ++ PE Q K DV+S G+ +EL K P+F+ S
Sbjct: 168 ANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 222
Query: 247 ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTME 303
LY I ++ L + F N + CL + RPT E
Sbjct: 223 -----------------LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLH 121
++L QG + + M + +I+ + V+L+G C + E +LV E G L++ L
Sbjct: 369 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 427
Query: 122 DRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADF 181
+ +E P++ + +V+ + YL HR++ + N+LL R+ AK++DF
Sbjct: 428 GK--REEIPVS--NVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDF 480
Query: 182 GTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
G SK + D ++ T + G + + PE + + +SDV+S+GV + E L+ G+KP
Sbjct: 481 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 56 NHFNVNRILGQGGQGTVYKGMREDG----RIIAVKKSKNAVKLL----------GCCLET 101
+ F + ++LGQG G V+ + G ++ A+K K A + +E
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 102 EVPLLV---YEFISNGTLY--------QHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
P +V Y F + G LY L RL + +++ +A E+A AL +L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 143
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS I +RD+K NILLDE K+ DFG SK ++D GT Y+ PE
Sbjct: 144 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
T +D +SFGV++ E+LTG P G +E +++
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 56 NHFNVNRILGQGGQGTVYKGMREDG----RIIAVKKSKNAVKLL----------GCCLET 101
+ F + ++LGQG G V+ + G ++ A+K K A + +E
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 102 EVPLLV---YEFISNGTLY--------QHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
P +V Y F + G LY L RL + +++ +A E+A AL +L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 142
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS I +RD+K NILLDE K+ DFG SK ++D GT Y+ PE
Sbjct: 143 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
T +D +SFGV++ E+LTG P G +E +++
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 56 NHFNVNRILGQGGQGTVYKGMREDG----RIIAVKKSKNAVKLL----------GCCLET 101
+ F + ++LGQG G V+ + G ++ A+K K A + +E
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 102 EVPLLV---YEFISNGTLY--------QHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
P +V Y F + G LY L RL + +++ +A E+A AL +L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 142
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
HS I +RD+K NILLDE K+ DFG SK ++D GT Y+ PE
Sbjct: 143 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
T +D +SFGV++ E+LTG P G +E +++
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 237
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAV--VLLYMATQISSAMEYLEKKN---FIH 341
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
R++ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 444
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 445 PEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 49/221 (22%)
Query: 64 LGQGGQGTVYKGMRED-GRIIAVKKSKNAVKLLG---CCLETEV---------------- 103
LG GG G V + + +D G +A+K+ + + CLE ++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 104 -----------PLLVYEFISNGTLYQHLHDRLQN----QEFPLTWEMRLRIATEVAGALA 148
PLL E+ G L ++L ++ +N +E P+ + ++++ AL
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIR-----TLLSDISSALR 135
Query: 149 YLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
YLH I HRD+K NI+L +R K+ D G +K +DQ + T+ GT YL
Sbjct: 136 YLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYL 190
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
PE + + T D +SFG + E +TG +P Q
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 49/221 (22%)
Query: 64 LGQGGQGTVYKGMRED-GRIIAVKKSKNAVKLLG---CCLETEV---------------- 103
LG GG G V + + +D G +A+K+ + + CLE ++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 104 -----------PLLVYEFISNGTLYQHLHDRLQN----QEFPLTWEMRLRIATEVAGALA 148
PLL E+ G L ++L ++ +N +E P+ + ++++ AL
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIR-----TLLSDISSALR 136
Query: 149 YLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
YLH I HRD+K NI+L +R K+ D G +K +DQ + T+ GT YL
Sbjct: 137 YLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYL 191
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
PE + + T D +SFG + E +TG +P Q
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 380
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
R++ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 441 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 483
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 484 PEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 120 LHDRLQNQEFP--------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD 171
L + +N+ P LT E + + +VA + +L AS HRD+ + NILL
Sbjct: 123 LRSK-RNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 172 ERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVE 230
E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 179 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 231 LLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
IFS G + V + F +++
Sbjct: 239 -------IFSLGASPYPGVKIDEEFCRRLKE 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 64 LGQGGQGTVYKGMREDGRI-IAVK----------------------KSKNAVKLLGCCLE 100
LG G G VY+G+ + + +AVK K N V+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
++ EF++ G L +L + QE + L +AT+++ A+ YL H
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNAV--VLLYMATQISSAMEYLEKKN---FIH 338
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
R++ + N L+ E + KVADFG S+ + D + + PE ++ + KSD
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V++FGV+L E+ T + + SQ +Y++L+ +
Sbjct: 399 VWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRMERPEGC 441
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
L C N RP+ E+
Sbjct: 442 PEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 52/267 (19%)
Query: 64 LGQGGQGTVYKGMR-EDGRIIAVK-----------------------KSKNAVKLLGCCL 99
+GQG GTVY M G+ +A++ K+ N V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
+ +V E+++ G+L + + ++ + E AL +LHS + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHS---NQVI 138
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRDIKS NILL K+ DFG I +Q+ +++ GT ++ PE K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
D++S G++ +E++ G+ P + EN A Y + + + +L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT-----------NGTPELQNPE 240
Query: 280 QIMA-FANLAERCLDLNGKKRPTMEEV 305
++ A F + RCLD++ +KR + +E+
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 259
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 120 LHDRLQNQEFP--------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD 171
L + +N+ P LT E + + +VA + +L AS HRD+ + NILL
Sbjct: 123 LRSK-RNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 172 ERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVE 230
E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 231 LLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
IFS G + V + F +++
Sbjct: 239 -------IFSLGASPYPGVKIDEEFXRRLKE 262
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKG------------------------MRE-- 78
+F E + A ++R LGQG G VY+G MRE
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 79 ----DGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
+ ++ + V+LLG + + L++ E ++ G L +L ++N
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 64 LGQGGQGTVYK-GMREDGRIIAVKK---------SKNAVKLLGCCLET-EVPLLVY---E 109
+G G G V+K R+ G +IAVK+ +K + L L++ + P +V
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 110 FISN----------GTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
FI+N GT + L R+Q P+ + ++ + AL YL +
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHG--VI 147
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTD-- 217
HRD+K +NILLDER + K+ DFG S + D+ + G Y+ PE T
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERIDPPDPTKPD 205
Query: 218 ---KSDVYSFGVVLVELLTGKKP 237
++DV+S G+ LVEL TG+ P
Sbjct: 206 YDIRADVWSLGISLVELATGQFP 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKG------------------------MRE-- 78
++ E + A ++R LGQG G VY+G MRE
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 79 ----DGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
+ ++ + V+LLG + + L++ E ++ G L +L ++N
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA- 188
P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 58 FNVNRILGQGGQGTVYKGM-REDGRIIAVKK---------------------SKNAVKLL 95
F+V LG+G G+VYK + +E G+I+A+K+ S + VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 96 GCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
G + +V E+ G++ + RL+N+ LT + I L YLH
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDII--RLRNKT--LTEDEIATILQSTLKGLEYLHFMRK 146
Query: 156 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
HRDIK+ NILL+ AK+ADFG + + D + GT ++ PE Q
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 216 TDKSDVYSFGVVLVELLTGKKP 237
+D++S G+ +E+ GK P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 51 LDK-ATNHFNVNRILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV- 107
+DK AT ++L +G + ++ + + +I I + N V LLG C + PL+V
Sbjct: 53 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 112
Query: 108 YEFISNGTLYQHLHDRLQNQEFP----------LTWEMRLRIATEVAGALAYLHSAASSP 157
EF G L +L + +N+ P LT E + + +VA + +L AS
Sbjct: 113 VEFCKFGNLSTYLRSK-RNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRK 168
Query: 158 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLT 216
HRD+ + NILL E+ K+ DFG ++ I D V + ++ PE T
Sbjct: 169 XIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 217 DKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
+SDV+SFGV+L E IFS G + V + F +++
Sbjct: 229 IQSDVWSFGVLLWE-------IFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 69/332 (20%)
Query: 34 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-----REDGRI-IA 84
SY+G + ID +L +++ + N+ + LG G G V + +ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 85 VK-------------------------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQH 119
VK + +N V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 120 LHDRLQ---NQEFPLTWEMR--LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERY 174
L + + ++E E+R L +++VA +A+L AS HRD+ + N+LL +
Sbjct: 141 LRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGH 197
Query: 175 RAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
AK+ DFG ++ I D ++ + ++ PE T +SDV+S+G++L E
Sbjct: 198 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE--- 254
Query: 234 GKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFA-----NLA 288
IFS G + + ++ Y ++ D G + AFA ++
Sbjct: 255 ----IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPKNIYSIM 296
Query: 289 ERCLDLNGKKRPTMEEVSMELNGIRGSSRKKR 320
+ C L RPT +++ L R++R
Sbjct: 297 QACWALEPTHRPTFQQICSFLQEQAQEDRRER 328
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKGMR------EDGRIIAVKKSKNA------------ 91
E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 92 ------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF--PLTWE 134
V+LLG + + L++ E ++ G L +L ++N P +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTH 193
+++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I D
Sbjct: 124 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 194 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 100 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 159
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 160 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 215
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV
Sbjct: 216 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 275
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
+L E IFS G + V + F +++
Sbjct: 276 LLWE-------IFSLGASPYPGVKIDEEFCRRLKEG 304
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 39 VIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR------EDGRIIAVKKSKNA- 91
++ ++ E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 92 -----------------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQ 125
V+LLG + + L++ E ++ G L +L ++
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 126 NQEF--PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
N P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 184 SKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 259
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 111/252 (44%), Gaps = 35/252 (13%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ I+A S V+L + + +V E++ G L + + N + P W
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV----NLMSNYDVPEKWAKFY 179
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT---HV 194
EV AL +HS + HRD+K N+LLD+ K+ADFGT + MD+T H
Sbjct: 180 --TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHC 232
Query: 195 TTKIQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
T + GT Y+ PE + SQ D + D +S GV L E+L G P ++
Sbjct: 233 DTAV-GTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD-------- 282
Query: 250 SLAAYFVHSM-RKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNG----KKRPTMEE 304
SL + M KN L D ++ K KN I AF E L NG K+ P +
Sbjct: 283 SLVGTYSKIMDHKNSLCFPEDAEISKHA-KNLICAFLTDREVRLGRNGVEEIKQHPFFKN 341
Query: 305 VSMELNGIRGSS 316
+ IR ++
Sbjct: 342 DQWNWDNIRETA 353
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 39 VIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR------EDGRIIAVKKSKNA- 91
++ ++ E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 92 -----------------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQ 125
V+LLG + + L++ E ++ G L +L ++
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 126 NQEF--PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
N P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 184 SKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 123 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
+L E IFS G + V + F +++
Sbjct: 239 LLWE-------IFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 139 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 248
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 249 ELFKLLKEGHRMDKPSNCTNELYMMMRD 276
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLVY-EFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTY 113
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 114 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV
Sbjct: 170 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
+L E IFS G + V + F +++
Sbjct: 230 LLWE-------IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 41 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLE 100
D KL++ K L KAT + Q + T + R + +++ + + L +
Sbjct: 80 DTGKLYAMKVLKKAT--------IVQKAKTTEH--TRTERQVLEHIRQSPFLVTLHYAFQ 129
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
TE L L+ ++I+ G L+ HL R + E E+++ + E+ AL +LH I
Sbjct: 130 TETKLHLILDYINGGELFTHLSQRERFTEH----EVQIYVG-EIVLALEHLHKLG---II 181
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT-DK 218
+RDIK NILLD + DFG SK D+T GT Y+ P+ + DK
Sbjct: 182 YRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDK 241
Query: 219 S-DVYSFGVVLVELLTGKKPIFSAGN-TSQENVS 250
+ D +S GV++ ELLTG P G SQ +S
Sbjct: 242 AVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLVY-EFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTY 113
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 114 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV
Sbjct: 170 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
+L E IFS G + V + F +++
Sbjct: 230 LLWE-------IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR-----------LQNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 259
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 65 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 124
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 125 LRSK-RNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 180
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D +V + ++ PE T +SDV+SFGV
Sbjct: 181 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 240
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
+L E IFS G + V + F +++
Sbjct: 241 LLWE-------IFSLGASPYPGVKIDEEFCRRLKEG 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 135 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 244
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 245 ELFKLLKEGHRMDKPSNCTNELYMMMRD 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 143 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 252
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 253 ELFKLLKEGHRMDKPSNCTNELYMMMRD 280
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 142 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 251
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 252 ELFKLLKEGHRMDKPSNCTNELYMMMRD 279
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 259
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 64 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 123
Query: 120 LHDRLQNQEFP-----------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNI 168
L + +N+ P LT E + + +VA + +L AS HRD+ + NI
Sbjct: 124 LRSK-RNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 179
Query: 169 LLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVV 227
LL E+ K+ DFG ++ I D V + ++ PE T +SDV+SFGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 228 LVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
L E IFS G + V + F +++
Sbjct: 240 LWE-------IFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRL-----------QNQEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R N E L+
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 191 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVE 300
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 301 ELFKLLKEGHRMDKPSNCTNELYMMMRD 328
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 50/269 (18%)
Query: 1 MLLRIIRKKRMDIKLKEGFFKXXXXXXXXXXXXSYDGSVIDRCKLFSSKELDKATNHFNV 60
++L + +KR + +L G S + ++ E + A +
Sbjct: 3 IMLYVFHRKRNNSRLGNGVL-----------YASVNPEYFSAADVYVPDEWEVAREKITM 51
Query: 61 NRILGQGGQGTVYKG------------------------MRE------DGRIIAVKKSKN 90
+R LGQG G VY+G MRE + ++ +
Sbjct: 52 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 91 AVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF--PLTWEMRLRIATEVAG 145
V+LLG + + L++ E ++ G L +L ++N P + +++A E+A
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGY 204
+AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I D K +
Sbjct: 172 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 228
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
+ PE + T SDV+SFGVVL E+ T
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 137/338 (40%), Gaps = 75/338 (22%)
Query: 34 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-----REDGRI-IA 84
SY+G + ID +L +++ + N+ + LG G G V + +ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 85 VK-------------------------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQH 119
VK + +N V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 120 L-----------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNI 168
L ++ N E L+ L +++VA +A+L AS HRD+ + N+
Sbjct: 141 LRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 197
Query: 169 LLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVV 227
LL + AK+ DFG ++ I D ++ + ++ PE T +SDV+S+G++
Sbjct: 198 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 257
Query: 228 LVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFA-- 285
L E IFS G + + ++ Y ++ D G + AFA
Sbjct: 258 LWE-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPK 296
Query: 286 ---NLAERCLDLNGKKRPTMEEVSMELNGIRGSSRKKR 320
++ + C L RPT +++ L R++R
Sbjct: 297 NIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 334
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
K N V+LLG C +V E++ G L +L R N+E +T + L +AT+++ A
Sbjct: 86 KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNRE-EVTAVVLLYMATQISSA 142
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
+ YL HRD+ + N L+ E + KVADFG S+ + D + +
Sbjct: 143 MEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 199
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
PE + + KSDV++FGV+L E+ T G P
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 113
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 114 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D V + ++ PE T +SDV+SFGV
Sbjct: 170 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
+L E IFS G + V + F +++
Sbjct: 230 LLWE-------IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKG------------------------MRE-- 78
++ E + A ++R LGQG G VY+G MRE
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 79 ----DGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
+ ++ + V+LLG + + L++ E ++ G L +L ++N
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 123 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D V + ++ PE T +SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
+L E IFS G + V + F +++
Sbjct: 239 LLWE-------IFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLVY-EFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTY 113
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 114 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D V + ++ PE T +SDV+SFGV
Sbjct: 170 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 229
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
+L E IFS G + V + F +++
Sbjct: 230 LLWE-------IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKG------------------------MRE-- 78
++ E + A ++R LGQG G VY+G MRE
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 79 ----DGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
+ ++ + V+LLG + + L++ E ++ G L +L ++N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 69/317 (21%)
Query: 34 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-----REDGRI-IA 84
SY+G + ID +L +++ + N+ + LG G G V + +ED + +A
Sbjct: 13 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 72
Query: 85 VK-------------------------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQH 119
VK + +N V LLG C L++ E+ G L
Sbjct: 73 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 132
Query: 120 LHDRLQ---NQEFPLTWEMR--LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERY 174
L + + ++E E+R L +++VA +A+L AS HRD+ + N+LL +
Sbjct: 133 LRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGH 189
Query: 175 RAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
AK+ DFG ++ I D ++ + ++ PE T +SDV+S+G++L E
Sbjct: 190 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE--- 246
Query: 234 GKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFA-----NLA 288
IFS G + + ++ Y ++ D G + AFA ++
Sbjct: 247 ----IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPKNIYSIM 288
Query: 289 ERCLDLNGKKRPTMEEV 305
+ C L RPT +++
Sbjct: 289 QACWALEPTHRPTFQQI 305
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 52/267 (19%)
Query: 64 LGQGGQGTVYKGMR-EDGRIIAVK-----------------------KSKNAVKLLGCCL 99
+GQG GTVY M G+ +A++ K+ N V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
+ +V E+++ G+L + + ++ + E AL +LHS + +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHS---NQVI 139
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HR+IKS NILL K+ DFG I +Q+ +T + GT ++ PE K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
D++S G++ +E++ G+ P + EN A Y + + + +L
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT-----------NGTPELQNPE 241
Query: 280 QIMA-FANLAERCLDLNGKKRPTMEEV 305
++ A F + RCL+++ +KR + +E+
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKEL 268
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 52/267 (19%)
Query: 64 LGQGGQGTVYKGMR-EDGRIIAVK-----------------------KSKNAVKLLGCCL 99
+GQG GTVY M G+ +A++ K+ N V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
+ +V E+++ G+L + + ++ + E AL +LHS + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHS---NQVI 138
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRDIKS NILL K+ DFG I +Q+ + + GT ++ PE K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
D++S G++ +E++ G+ P + EN A Y + + + +L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT-----------NGTPELQNPE 240
Query: 280 QIMA-FANLAERCLDLNGKKRPTMEEV 305
++ A F + RCL+++ +KR + +E+
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKEL 267
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 60 VNRILGQGGQGTVYKGMREDGR----IIAVKKSK------------------------NA 91
+NRILG+G G VY+G+ + + +AVK K +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
VKL+G +E E ++ E G L +L +R +N LT + + ++ A+AYL
Sbjct: 72 VKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLT---LVLYSLQICKAMAYLE 126
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 211
S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 127 SINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 212 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 59/297 (19%)
Query: 56 NHFNVNRILGQGGQGTVYKGM--REDGRII--AVKKSK---------------------- 89
F + R+LG+G G+V + +EDG + AVK K
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 90 ---NAVKLLGCCLET------EVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRI 139
+ KL+G L + +P+++ F+ +G L+ L R+ F L + +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHVTTKI 198
++A + YL +S HRD+ + N +L E VADFG S K + D
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQENVSLAAYFVH 257
+ +L E + T SDV++FGV + E++T G+ P EN + Y +
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY-----AGIENAEIYNYLIG 254
Query: 258 SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRG 314
R + + +++ +L +C + K+RP+ + MEL I G
Sbjct: 255 GNRLKQPPECMEE-------------VYDLMYQCWSADPKQRPSFTCLRMELENILG 298
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 52/267 (19%)
Query: 64 LGQGGQGTVYKGMR-EDGRIIAVK-----------------------KSKNAVKLLGCCL 99
+GQG GTVY M G+ +A++ K+ N V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
+ +V E+++ G+L + + ++ + E AL +LHS + +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHS---NQVI 139
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRDIKS NILL K+ DFG I +Q+ + + GT ++ PE K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
D++S G++ +E++ G+ P + EN A Y + + + +L
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT-----------NGTPELQNPE 241
Query: 280 QIMA-FANLAERCLDLNGKKRPTMEEV 305
++ A F + RCL+++ +KR + +E+
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKEL 268
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 47/233 (20%)
Query: 37 GSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG--------------------- 75
GSV D E + A ++R LGQG G VY+G
Sbjct: 1 GSVPD--------EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 52
Query: 76 ---MRE------DGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---R 123
MRE + ++ + V+LLG + + L++ E ++ G L +L
Sbjct: 53 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 124 LQNQEF--PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADF 181
++N P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DF
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 169
Query: 182 GTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
G ++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 170 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 60 VNRILGQGGQGTVYKGMREDGR----IIAVKKSK------------------------NA 91
+NRILG+G G VY+G+ + + +AVK K +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
VKL+G +E E ++ E G L +L +R +N LT + + ++ A+AYL
Sbjct: 76 VKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLT---LVLYSLQICKAMAYLE 130
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 211
S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 131 SINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 212 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 120 LHDRLQNQEFP------------LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTN 167
L + +N+ P LT E + + +VA + +L AS HRD+ + N
Sbjct: 123 LRSK-RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
Query: 168 ILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 226
ILL E+ K+ DFG ++ I D V + ++ PE T +SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 227 VLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
+L E IFS G + V + F +++
Sbjct: 239 LLWE-------IFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 65/301 (21%)
Query: 57 HFNVNRILGQGGQGTV----YKGMRED-GRIIAVKKSK---------------------- 89
H R LG+G G+V Y ++++ G ++AVKK +
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 90 -NAVKLLGCCLET--EVPLLVYEFISNGTLYQHLH---DRLQNQEFPLTWEMRLRIATEV 143
N VK G C L+ EF+ G+L ++L +R+ + + L+ +++
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-------LQYTSQI 126
Query: 144 AGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--- 200
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+ +
Sbjct: 184 IFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIG 232
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVSMELNGI 312
++ ++ +++L K N + + + C + N +RP+ ++++ ++ I
Sbjct: 233 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
Query: 313 R 313
R
Sbjct: 293 R 293
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 60 VNRILGQGGQGTVYKGMREDGR----IIAVKKSK------------------------NA 91
+NRILG+G G VY+G+ + + +AVK K +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
VKL+G +E E ++ E G L +L +R +N LT + + ++ A+AYL
Sbjct: 88 VKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLT---LVLYSLQICKAMAYLE 142
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 211
S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 143 SINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 212 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 45/214 (21%)
Query: 61 NRILGQGGQGTVYKGMRED---GRIIAVKKS-------------------------KNAV 92
+R++G+G G VY G D RI KS N +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 93 KLLGCCLETE-VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
L+G L E +P ++ ++ +G L Q + +N T + + +VA + YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP----TVKDLISFGLQVARGMEYL- 140
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD------QTHVTTKIQGTFGYL 205
A HRD+ + N +LDE + KVADFG ++ I +D Q H ++ + L
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTAL 197
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
E Q+ + T KSDV+SFGV+L ELLT P +
Sbjct: 198 --ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 45/210 (21%)
Query: 62 RILGQGGQGTVYKG-----------------MRE------------DGRIIAVKKSKNAV 92
++LG G GTVYKG +RE + ++A S
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 93 KLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEFPLTWEMRLRIATEVAGALAY 149
+LLG CL + V LV + + G L H+ + RL +Q+ L W M ++A ++Y
Sbjct: 83 RLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDL-LNWCM------QIAKGMSY 134
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPE 208
L + HRD+ + N+L+ K+ DFG ++ + +D+T + ++ E
Sbjct: 135 LEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 40/227 (17%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKG-MREDGR---IIAVKKSK-------------- 89
+KELD + + R++G G G V G ++ G+ +A+K K
Sbjct: 37 AKELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCE 94
Query: 90 ----------NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI 139
N V L G + ++V EF+ NG L L R + +F + +++
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTV-----IQL 147
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 199
+ G A + A HRD+ + NIL++ KV+DFG S+ I D V T
Sbjct: 148 VGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 200 GTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
G + PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 66/288 (22%)
Query: 64 LGQGGQGTVYKG-MREDGRIIAVKKSK------------------------NAVKLLGCC 98
+G+G G V+ G +R D ++AVK + N V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT------EVAGALAYLHS 152
+ + +V E + G L T RLR+ T + A + YL S
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR----------TEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 153 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-QGTFGYLDPEYHQ 211
HRD+ + N L+ E+ K++DFG S+ A + + Q + PE
Sbjct: 232 KCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 212 SSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS--LAAYFVHSMRKNRLYDILD 269
+ + +SDV+SFG++L E FS G + N+S FV + ++
Sbjct: 289 YGRYSSESDVWSFGILLWE-------TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP 341
Query: 270 DQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSR 317
D V + L E+C +RP+ + EL IR R
Sbjct: 342 DAVFR------------LMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKG------------------------MRE-- 78
++ E + A ++R LGQG G VY+G MRE
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 79 ----DGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
+ ++ + V+LLG + + L++ E ++ G L +L ++N
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P + +++A E+A +AYL+ ++ HRD+ + N + E + K+ DFG ++ I
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 50/281 (17%)
Query: 58 FNVNRILGQGGQGTVYKG-MREDGRIIAVKKSKNAVKLLG-------------------- 96
F ++++LG+G G V+ ++ + A+K K V L+
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 97 ------CCLET-EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
C +T E V E+++ G L H+ +F L+ A E+ L +
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLS--RATFYAAEIILGLQF 134
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 209
LHS I +RD+K NILLD+ K+ADFG K + T + GT Y+ PE
Sbjct: 135 LHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIAPEI 190
Query: 210 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILD 269
+ D +SFGV+L E+L G+ P G +E HS+R + +
Sbjct: 191 LLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEE-------LFHSIRMDNPF--YP 239
Query: 270 DQVMKLGKKNQIMAFANLAERCLDLNG--KKRPTMEEVSME 308
+ K K + F E+ L + G ++ P E++ E
Sbjct: 240 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 106 LVYEFISNGT---LYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
LV + +S G+ + +H+ + +++ L I EV L YLH HRD
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRD 146
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF----GYLDPEYHQSSQLTD- 217
+K+ NILL E ++ADFG S F+A K++ TF ++ PE + + D
Sbjct: 147 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 206
Query: 218 KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQV-MKLG 276
K+D++SFG+ +EL TG P Y + K + + +D ++ G
Sbjct: 207 KADIWSFGITAIELATGAAP----------------YHKYPPMKVLMLTLQNDPPSLETG 250
Query: 277 KKNQIM------AFANLAERCLDLNGKKRPTMEEV 305
+++ M +F + CL + +KRPT E+
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 106 LVYEFISNGT---LYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
LV + +S G+ + +H+ + +++ L I EV L YLH HRD
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRD 141
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF----GYLDPEYHQSSQLTD- 217
+K+ NILL E ++ADFG S F+A K++ TF ++ PE + + D
Sbjct: 142 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 201
Query: 218 KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQV-MKLG 276
K+D++SFG+ +EL TG P Y + K + + +D ++ G
Sbjct: 202 KADIWSFGITAIELATGAAP----------------YHKYPPMKVLMLTLQNDPPSLETG 245
Query: 277 KKNQIM------AFANLAERCLDLNGKKRPTMEEV 305
+++ M +F + CL + +KRPT E+
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 39/207 (18%)
Query: 62 RILGQGGQGTVYKGMR-----------------------------EDGRIIAVKKSKNAV 92
++LG G GTVYKG+ ++ I+A + V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 93 KLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHS 152
+LLG CL + LV + + +G L +++H+ N + ++ L ++A + YL
Sbjct: 81 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQIAKGMMYLEE 135
Query: 153 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQ 211
+ HRD+ + N+L+ K+ DFG ++ + D+ + ++ E
Sbjct: 136 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 212 SSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ T +SDV+S+GV + EL+T G KP
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 122
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 123 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMR------EDGRIIAVKKSKNA------- 91
++ E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 92 -----------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
V+LLG + + L++ E ++ G L +L + N
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 134
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 135 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 124
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 125 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 56 NHFNVNRILGQGGQGTVYKGMRED-GRIIAVKK-SKNAVK-------------LLGCCLE 100
N F+V+RI+G+GG G VY + D G++ A+K K +K +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 101 TEVPLLV---YEF------------ISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ P +V Y F ++ G L+ HL Q+ F +MR A E+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEA-DMRF-YAAEIIL 303
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 238
PE Q D S D +S G +L +LL G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 56 NHFNVNRILGQGGQGTVYKGMRED-GRIIAVKK-SKNAVK-------------LLGCCLE 100
N F+V+RI+G+GG G VY + D G++ A+K K +K +L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 101 TEVPLLV---YEF------------ISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ P +V Y F ++ G L+ HL Q+ F +MR A E+
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEA-DMRF-YAAEIIL 302
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 238
PE Q D S D +S G +L +LL G P
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 66/288 (22%)
Query: 64 LGQGGQGTVYKG-MREDGRIIAVKKSK------------------------NAVKLLGCC 98
+G+G G V+ G +R D ++AVK + N V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT------EVAGALAYLHS 152
+ + +V E + G L T RLR+ T + A + YL S
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR----------TEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 153 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-QGTFGYLDPEYHQ 211
HRD+ + N L+ E+ K++DFG S+ A + + Q + PE
Sbjct: 232 KCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 212 SSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS--LAAYFVHSMRKNRLYDILD 269
+ + +SDV+SFG++L E FS G + N+S FV + ++
Sbjct: 289 YGRYSSESDVWSFGILLWE-------TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP 341
Query: 270 DQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSR 317
D V + L E+C +RP+ + EL IR R
Sbjct: 342 DAVFR------------LMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMR------EDGRIIAVKKSKNA------- 91
++ E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 92 -----------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHD---RLQNQEF-- 129
V+LLG + + L++ E ++ G L +L + N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P + +++A E+A +AYL+ ++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 56 NHFNVNRILGQGGQGTVYKGMRED-GRIIAVKK-SKNAVK-------------LLGCCLE 100
N F+V+RI+G+GG G VY + D G++ A+K K +K +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 101 TEVPLLV---YEF------------ISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ P +V Y F ++ G L+ HL Q+ F +MR A E+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEA-DMRF-YAAEIIL 303
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 238
PE Q D S D +S G +L +LL G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 56 NHFNVNRILGQGGQGTVYKGMRED-GRIIAVKK-SKNAVK-------------LLGCCLE 100
N F+V+RI+G+GG G VY + D G++ A+K K +K +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 101 TEVPLLV---YEF------------ISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ P +V Y F ++ G L+ HL Q+ F +MR A E+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEA-DMRF-YAAEIIL 303
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 238
PE Q D S D +S G +L +LL G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 39/207 (18%)
Query: 62 RILGQGGQGTVYKGMR-----------------------------EDGRIIAVKKSKNAV 92
++LG G GTVYKG+ ++ I+A + V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 93 KLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHS 152
+LLG CL + LV + + +G L +++H+ N + ++ L ++A + YL
Sbjct: 104 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQIAKGMMYLEE 158
Query: 153 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQ 211
+ HRD+ + N+L+ K+ DFG ++ + D+ + ++ E
Sbjct: 159 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 212 SSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ T +SDV+S+GV + EL+T G KP
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 109/283 (38%), Gaps = 59/283 (20%)
Query: 58 FNVNRILGQGGQGTVYKGMR-EDGRIIAVK-----------------------KSKNAVK 93
F + ++G G G VYKG + G++ A+K +N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 94 LLGCCLETEVP------LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
G ++ P LV EF G++ + + N L E I E+ L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT---LKEEWIAYICREILRGL 142
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 207
++LH + HRDIK N+LL E K+ DFG S + T I GT ++ P
Sbjct: 143 SHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAP 198
Query: 208 EYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKN 262
E + D KSD++S G+ +E+ G P+ +H MR
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD---------------MHPMRA- 242
Query: 263 RLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
L+ I + +L K F + E CL N +RP E++
Sbjct: 243 -LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 62 RILGQGGQGTVYKGMREDGR-----IIAVKKSK------------------------NAV 92
+++G G G VYKGM + +A+K K N +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 93 KLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHS 152
+L G + + +++ E++ NG L + L R ++ EF + L++ + G A +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSV-----LQLVGMLRGIAAGMKY 162
Query: 153 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ--THVTTKIQGTFGYLDPEYH 210
A+ HRD+ + NIL++ KV+DFG S+ + D T+ T+ + + PE
Sbjct: 163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 211 QSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ T SDV+SFG+V+ E++T G++P + N
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 142
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 143 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 87 KSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ N V+LLG +E + L +V E+++ G+L +L R ++ L + L+ + +V
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCE 300
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q ++ T
Sbjct: 301 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---- 353
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLY 265
PE + + + KSDV+SFG++L E I+S G + L V + K
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKD-VVPRVEKGYKM 405
Query: 266 DILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIR 313
D D A ++ + C L+ RPT ++ +L IR
Sbjct: 406 DAPD---------GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 92 VKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYL 150
VK G C E P+ +V E+ISNG L +L + E P L + +V +A+L
Sbjct: 66 VKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLE-P---SQLLEMCYDVCEGMAFL 120
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
S HRD+ + N L+D KV+DFG ++++ DQ + + + PE
Sbjct: 121 ESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF 177
Query: 211 QSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV++FG+++ E+ + GK P
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMP 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 145 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 145 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI-ATEVAGALAYLHSAASSPIYHRDIK 164
V ++I+ G L+ HL Q E R R A E+A AL YLHS I +RD+K
Sbjct: 116 FVLDYINGGELFYHL------QRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLK 166
Query: 165 STNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSF 224
NILLD + + DFG K ++ T+ GT YL PE D +
Sbjct: 167 PENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225
Query: 225 GVVLVELLTGKKPIFSAG------NTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKK 278
G VL E+L G P +S N + + L +S R + D+ +LG K
Sbjct: 226 GAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK 285
Query: 279 NQIM 282
+ M
Sbjct: 286 DDFM 289
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+IA + AL +LHS S + HRD+K +N+L++ + K+ DFG S ++ D V
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKD 167
Query: 198 IQ-GTFGYL-----DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
I G Y+ +PE +Q + KSD++S G+ ++EL + P S G Q+
Sbjct: 168 IDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---- 222
Query: 252 AAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
L ++++ +L F + +CL N K+RPT E+
Sbjct: 223 ------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 114/297 (38%), Gaps = 56/297 (18%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
+F E + + + R LGQG G VY+G D G +AVK
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA- 188
P T + +++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
D K ++ PE + T SD++SFGVVL E+
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------------- 222
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N K RPT E+
Sbjct: 223 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 279
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 45/252 (17%)
Query: 56 NHFNVNRILGQGGQGTVYKG--MREDGRI--IAVKKSK---------------------- 89
N + +ILG+G G+V +G +EDG +AVK K
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93
Query: 90 ---NAVKLLGCCLETEV-----PLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIA 140
N ++LLG C+E P+++ F+ G L+ +L + RL+ + + L+
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-Q 199
++A + YL ++ HRD+ + N +L + VADFG SK I + +I +
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQENVSLAAYFVHS 258
++ E T KSDV++FGV + E+ T G P +N + Y +H
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY-----PGVQNHEMYDYLLHG 265
Query: 259 MRKNRLYDILDD 270
R + D LD+
Sbjct: 266 HRLKQPEDCLDE 277
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 89 KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+N VK G C E L+ EF+ +G+L ++L + +N+ + + +L+ A ++
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK---INLKQQLKYAVQICKG 138
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ---GTFG 203
+ YL S HRD+ + N+L++ ++ K+ DFG +K I D+ T K F
Sbjct: 139 MDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 204 YLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
Y PE S+ SDV+SFGV L ELLT
Sbjct: 196 YA-PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 114/297 (38%), Gaps = 56/297 (18%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
+F E + + + R LGQG G VY+G D G +AVK
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA- 188
P T + +++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
D K ++ PE + T SD++SFGVVL E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------------- 225
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N K RPT E+
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+IA + AL +LHS S + HRD+K +N+L++ + K+ DFG S ++ + T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTI 212
Query: 198 IQGTFGYL-----DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
G Y+ +PE +Q + KSD++S G+ ++EL + P S G Q+
Sbjct: 213 DAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----- 266
Query: 253 AYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
L ++++ +L F + +CL N K+RPT E+
Sbjct: 267 -----------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE + SD+++ G ++ +L+ G P F AGN
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 89 KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
+N VK G C E L+ EF+ +G+L ++L + +N+ + + +L+ A ++
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK---INLKQQLKYAVQICKG 126
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ---GTFG 203
+ YL S HRD+ + N+L++ ++ K+ DFG +K I D+ T K F
Sbjct: 127 MDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 183
Query: 204 YLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
Y PE S+ SDV+SFGV L ELLT
Sbjct: 184 YA-PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + G + + PE
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKI 198
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 114 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 214
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 50/281 (17%)
Query: 58 FNVNRILGQGGQGTVYKG-MREDGRIIAVKKSKNAVKLLG-------------------- 96
F ++++LG+G G V+ ++ + A+K K V L+
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 97 ------CCLET-EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
C +T E V E+++ G L H+ +F L+ A E+ L +
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLS--RATFYAAEIILGLQF 133
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 209
LHS I +RD+K NILLD+ K+ADFG K + T GT Y+ PE
Sbjct: 134 LHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIAPEI 189
Query: 210 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILD 269
+ D +SFGV+L E+L G+ P G +E HS+R + +
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEE-------LFHSIRMDNPF--YP 238
Query: 270 DQVMKLGKKNQIMAFANLAERCLDLNG--KKRPTMEEVSME 308
+ K K + F E+ L + G ++ P E++ E
Sbjct: 239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 53/267 (19%)
Query: 64 LGQGGQGTVYKGMREDGR-IIAVK------------------------KSKNAVKLLGCC 98
+G+G G VYKG+ + ++A+K S + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
L++ ++ E++ G+ L + PL I E+ L YLHS
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIATILREILKGLDYLHSERK--- 137
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRDIK+ N+LL E+ K+ADFG + + Q + GT ++ PE + S K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFK 196
Query: 219 SDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKK 278
+D++S G+ +EL G+ P N L H MR L+ I + L +
Sbjct: 197 ADIWSLGITAIELAKGEPP----------NSDL-----HPMR--VLFLIPKNSPPTLEGQ 239
Query: 279 NQIMAFANLAERCLDLNGKKRPTMEEV 305
+ F E CL+ + + RPT +E+
Sbjct: 240 HS-KPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKI 198
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 113 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKI 198
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 116 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 216
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 136/336 (40%), Gaps = 73/336 (21%)
Query: 34 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-----REDGRI-IA 84
SY+G + ID +L +++ + N+ + LG G G V + +ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 85 VK-------------------------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQH 119
VK + +N V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 120 LHDRLQNQEFPLTWEMR---------LRIATEVAGALAYLHSAASSPIYHRDIKSTNILL 170
L + + E + + L +++VA +A+L AS HRD+ + N+LL
Sbjct: 141 LRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 197
Query: 171 DERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLV 229
+ AK+ DFG ++ I D ++ + ++ PE T +SDV+S+G++L
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
Query: 230 ELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFA---- 285
E IFS G + + ++ Y ++ D G + AFA
Sbjct: 258 E-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPKNI 296
Query: 286 -NLAERCLDLNGKKRPTMEEVSMELNGIRGSSRKKR 320
++ + C L RPT +++ L R++R
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKI 198
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 115 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 73/301 (24%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK------------------------KSKNAVKLLGCC 98
+G+G G V+KG+ +++A+K S K G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT---EVAGALAYLHSAAS 155
L+ ++ E++ G+ D L+ F +IAT E+ L YLHS
Sbjct: 91 LKGSKLWIIMEYLGGGSAL----DLLRAGPFD-----EFQIATMLKEILKGLDYLHSEKK 141
Query: 156 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
HRDIK+ N+LL E+ K+ADFG + + Q T + GT ++ PE Q S
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAY 197
Query: 216 TDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR------KNRLYDILD 269
K+D++S G+ +EL G+ P N+ +H MR KN ++
Sbjct: 198 DSKADIWSLGITAIELAKGEPP-----NSD----------MHPMRVLFLIPKNNPPTLVG 242
Query: 270 DQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGIRGSSRKKRAMFSKIIKR 329
D +F + CL+ + RPT +E+ ++ S KK + +++I R
Sbjct: 243 DFT---------KSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS--KKTSYLTELIDR 291
Query: 330 L 330
Sbjct: 292 F 292
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 136/336 (40%), Gaps = 73/336 (21%)
Query: 34 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-----REDGRI-IA 84
SY+G + ID +L +++ + N+ + LG G G V + +ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 85 VK-------------------------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQH 119
VK + +N V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 120 LHDRLQNQEFPLTWEMR---------LRIATEVAGALAYLHSAASSPIYHRDIKSTNILL 170
L + + E + + L +++VA +A+L AS HRD+ + N+LL
Sbjct: 141 LRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 197
Query: 171 DERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLV 229
+ AK+ DFG ++ I D ++ + ++ PE T +SDV+S+G++L
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
Query: 230 ELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFA---- 285
E IFS G + + ++ Y ++ D G + AFA
Sbjct: 258 E-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPKNI 296
Query: 286 -NLAERCLDLNGKKRPTMEEVSMELNGIRGSSRKKR 320
++ + C L RPT +++ L R++R
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 486
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 487 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHL- 120
++L + + + + ++A + N VKLLG C + L++E+++ G L + L
Sbjct: 83 KMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR 142
Query: 121 -----------HDRLQNQ-------EFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
H L + PL+ +L IA +VA +AYL + HRD
Sbjct: 143 SMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRD 199
Query: 163 IKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
+ + N L+ E K+ADFG S+ I + D ++ PE ++ T +SDV
Sbjct: 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDV 259
Query: 222 YSFGVVLVELLT-GKKPIF 239
+++GVVL E+ + G +P +
Sbjct: 260 WAYGVVLWEIFSYGLQPYY 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 144 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 243
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
V+++G C E E +LV E G L ++L ++ + + + +V+ + YL
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 487
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 209
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 488 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 210 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ + KSDV+SFGV++ E + G+KP
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 121 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 140 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 239
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 140 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 136 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 48 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 103
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 104 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 160
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 161 TKVLPQDKEFFKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 212
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 213 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 269
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 270 NNNVNQRPSFRDLALRVDQIR 290
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 54 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 109
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 110 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 166
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 167 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 218
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 219 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 275
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 276 NNNVNQRPSFRDLALRVDQIR 296
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 53 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 108
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 109 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 165
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 166 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 217
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 218 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 274
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 275 NNNVNQRPSFRDLALRVDQIR 295
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ ++F L +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKFSLDLASLIL 115
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 66 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 121
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 122 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 178
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 179 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 230
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 231 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 287
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 288 NNNVNQRPSFRDLALRVDQIR 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 142 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 241
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 48 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 103
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 104 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 160
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 161 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 212
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 213 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 269
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 270 NNNVNQRPSFRDLALRVDQIR 290
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 136 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 199
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
GT Y+ PE SD+++ G ++ +L+ G P F AGN
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ ++F L +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKFSLDLASLIL 115
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +K
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 55 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 110
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 111 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 167
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 168 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 219
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 220 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 276
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 277 NNNVNQRPSFRDLALRVDQIR 297
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 127 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 181
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH 257
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI +G+ S L Y
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-GSGSGSMAIFELLDY--- 237
Query: 258 SMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
I+++ KL + F + +CL N +R ++++
Sbjct: 238 ---------IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 47 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 102
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 103 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 159
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 160 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 211
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 212 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 268
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 269 NNNVNQRPSFRDLALRVDQIR 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 66 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 121
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 122 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 178
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 179 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 230
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 231 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 287
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 288 NNNVNQRPSFRDLALRVDQIR 308
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 51 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 106
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 107 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 163
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 164 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 215
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 216 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 272
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 273 NNNVNQRPSFRDLALRVDQIR 293
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N V++ L E ++ EF+ G L + N+E T + V ALAY
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQALAY 156
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 209
LH+ + HRDIKS +ILL R K++DFG I+ D + GT ++ PE
Sbjct: 157 LHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEV 212
Query: 210 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
S + D++S G++++E++ G+ P FS
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 56/224 (25%)
Query: 58 FNVNRILGQGGQGTVYKGMREDGR-IIAVK--------------------------KSKN 90
F++ R LG+G G VY + + I+A+K + N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 91 AVKLLGCCLETEVPLLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIAT---EVAG 145
+++ + + L+ EF G LY+ L H R Q R AT E+A
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----------RSATFMEELAD 126
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQGT 201
AL Y H + HRDIK N+L+ + K+ADFG S H + + GT
Sbjct: 127 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 176
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTS 245
YL PE + +K D++ GV+ E L G P S +T
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 56/224 (25%)
Query: 58 FNVNRILGQGGQGTVYKGMREDGR-IIAVK--------------------------KSKN 90
F++ R LG+G G VY + + I+A+K + N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 91 AVKLLGCCLETEVPLLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIAT---EVAG 145
+++ + + L+ EF G LY+ L H R Q R AT E+A
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----------RSATFMEELAD 125
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQGT 201
AL Y H + HRDIK N+L+ + K+ADFG S H + + GT
Sbjct: 126 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTS 245
YL PE + +K D++ GV+ E L G P S +T
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 46 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 101
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 102 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 158
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 159 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 210
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 211 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 267
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 268 NNNVNQRPSFRDLALRVDQIR 288
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 59/298 (19%)
Query: 57 HFNVNRILGQGGQGTV----YKGMRED-GRIIAVKKSK---------------------- 89
H + LG+G G+V Y ++++ G ++AVKK +
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 90 -NAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
N VK G C L+ E++ G+L D LQ + + L+ +++
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFG 203
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G F
Sbjct: 131 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 204 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNR 263
Y PE S+ + SDV+SFGVVL EL T +++ S A F+ + ++
Sbjct: 188 YA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDK 236
Query: 264 LYDILDDQVMKLGKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVSMELNGIR 313
++ +++L K N + + + C + N +RP+ ++++ ++ IR
Sbjct: 237 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 37/232 (15%)
Query: 41 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----- 91
D + S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 434
Query: 92 -------------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLT 132
VKL+G E V ++ E + G L LQ ++F L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKFSLD 489
Query: 133 WEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 192
+ A +++ ALAYL S HRDI + N+L+ K+ DFG S+++
Sbjct: 490 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ +K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 48 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 103
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 104 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 160
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 161 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 212
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 213 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 269
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 270 NNNVNQRPSFRDLALRVDQIR 290
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 162
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH 257
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI +A +
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF--- 219
Query: 258 SMRKNRLYD-ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
L D I+++ KL + F + +CL N +R ++++
Sbjct: 220 -----ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 59/298 (19%)
Query: 57 HFNVNRILGQGGQGTV----YKGMRED-GRIIAVKKSK---------------------- 89
H + LG+G G+V Y ++++ G ++AVKK +
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 90 -NAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGA 146
N VK G C L+ E++ G+L D LQ + + L+ +++
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFG 203
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G F
Sbjct: 158 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 204 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNR 263
Y PE S+ + SDV+SFGVVL EL T +++ S A F+ + ++
Sbjct: 215 YA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDK 263
Query: 264 LYDILDDQVMKLGKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVSMELNGIR 313
++ +++L K N + + + C + N +RP+ ++++ ++ IR
Sbjct: 264 QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 116/294 (39%), Gaps = 86/294 (29%)
Query: 63 ILGQGGQGTVYKGMRE-DGRIIAVKKSKNAVKLLGCCLETEVPLLV-------------- 107
+LGQG G V K D R A+KK ++ + L L +EV LL
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASLNHQYVVRYYAAW 71
Query: 108 ----------------------YEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
E+ NGTLY +H NQ+ W R+ ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHVT--- 195
AL+Y+HS I HRD+K NI +DE K+ DFG +K + +D ++
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 196 ---TKIQGTFGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
T GT Y+ E + +K D+YS G++ E++ FS G E V++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----FSTG---MERVNI 237
Query: 252 AAYFVHSMRKNRLYDI-----LDDQVMKLGKKNQIMAFANLAERCLDLNGKKRP 300
++K R I DD MK+ KK + +D + KRP
Sbjct: 238 -------LKKLRSVSIEFPPDFDDNKMKVEKK--------IIRLLIDHDPNKRP 276
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH--SAASSPIYHRDI 163
+V E+ G L + + +++ L E LR+ T++ AL H S + HRD+
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQY-LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N+ LD + K+ DFG ++ + D + T + GT Y+ PE +KSD++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 224 FGVVLVELLTGKKPIFSA 241
G +L E L P F+A
Sbjct: 202 LGCLLYE-LCALMPPFTA 218
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 114/297 (38%), Gaps = 56/297 (18%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
+F E + + + R LGQG G VY+G D G +AVK
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P T + +++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
D K ++ PE + T SD++SFGVVL E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------------- 225
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N K RPT E+
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ +I+ K V+L E + +V E+++ G+L L D + L +
Sbjct: 53 EEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKD---GEGRALKLPNLV 108
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+A +VA +AY+ HRD++S NIL+ K+ADFG ++ I ++
Sbjct: 109 DMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ + PE + T KSDV+SFG++L EL+T G+ P N
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
N + L G ++ +++ EF+ NG+L L R + +F + +++ + G A
Sbjct: 94 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTV-----IQLVGMLRGIAA 146
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQGTFG--Y 204
+ A HRD+ + NIL++ KV+DFG S+F+ D + T+ + G +
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 206
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 49 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 104
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + + L+ +++ + YL + HR++ + NIL++ R K+ DFG
Sbjct: 105 LQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGL 161
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ + K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 162 TKVLPQDKEYYKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 213
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 214 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 270
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 271 NNNVNQRPSFRDLALRVDQIR 291
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 144 KDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYY 200
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 253
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 254 ELFKLLKEGHRMDKPANCTNELYMMMRD 281
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ +++ L +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLIL 115
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 146 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 202
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 255
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 256 ELFKLLKEGHRMDKPANCTNELYMMMRD 283
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 37/232 (15%)
Query: 41 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----- 91
D + S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 434
Query: 92 -------------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLT 132
VKL+G E V ++ E + G L LQ ++F L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKFSLD 489
Query: 133 WEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 192
+ A +++ ALAYL S HRDI + N+L+ K+ DFG S+++
Sbjct: 490 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ +K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 149 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 205
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 258
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 259 ELFKLLKEGHRMDKPANCTNELYMMMRD 286
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD---QTHV 194
+IA + AL +LHS S + HRD+K +N+L++ + K DFG S ++ D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
K ++PE +Q + KSD++S G+ +EL + P S G Q+
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ------- 249
Query: 255 FVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
L ++++ +L F + +CL N K+RPT E+
Sbjct: 250 ---------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 116/298 (38%), Gaps = 58/298 (19%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
+F E + + + R LGQG G VY+G D G +AVK
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 189
P T + +++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI-Y 181
Query: 190 DQTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
+ + +G ++ PE + T SD++SFGVVL E+
Sbjct: 182 ETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 225
Query: 248 NVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N K RPT E+
Sbjct: 226 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E++ +G L D LQ L L ++++ + YL S HRD+ +
Sbjct: 90 LVMEYLPSGCL----RDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAA 142
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVY 222
NIL++ K+ADFG +K + +D+ + + G F Y PE + + +SDV+
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVW 201
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIM 282
SFGVVL EL T ++ S +A F+ M R L + L + ++
Sbjct: 202 SFGVVLYELFT----------YCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLP 251
Query: 283 AFA-------NLAERCLDLNGKKRPTMEEVSMELNGIRGSSR 317
A L + C + + RP+ + +L+ + SR
Sbjct: 252 APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 293
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 203 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 259
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 312
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 313 ELFKLLKEGHRMDKPANCTNELYMMMRD 340
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ +++ L +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLIL 115
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 56/224 (25%)
Query: 58 FNVNRILGQGGQGTVYKGMREDGR-IIAVK--------------------------KSKN 90
F++ R LG+G G VY + + I+A+K + N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 91 AVKLLGCCLETEVPLLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIAT---EVAG 145
+++ + + L+ EF G LY+ L H R Q R AT E+A
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----------RSATFMEELAD 125
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQGT 201
AL Y H + HRDIK N+L+ + K+ADFG S H + + GT
Sbjct: 126 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTS 245
YL PE + +K D++ GV+ E L G P S +T
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 87 KSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ N V+LLG +E + L +V E+++ G+L +L R ++ L + L+ + +V
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCE 128
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q ++ T
Sbjct: 129 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---- 181
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
PE + + + KSDV+SFG++L E+ + G+ P
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
Query: 69 QGTVYKGMREDGRIIAVKKS---KNAVKLLGCCLET--EVPLLVYEFISNGTLYQHLHDR 123
Q + + +R+ R I + KS N VK G C L+ E++ G+L D
Sbjct: 51 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL----RDY 106
Query: 124 LQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 183
LQ + L+ +++ + YL + HRD+ + NIL++ R K+ DFG
Sbjct: 107 LQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 163
Query: 184 SKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+K + D+ K G F Y PE S+ + SDV+SFGVVL EL T
Sbjct: 164 TKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT------- 215
Query: 241 AGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFAN--------LAERCL 292
+++ S A F+ + ++ ++ +++L K N + + + C
Sbjct: 216 ---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 272
Query: 293 DLNGKKRPTMEEVSMELNGIR 313
+ N +RP+ ++++ ++ IR
Sbjct: 273 NNNVNQRPSFRDLALRVDQIR 293
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ +++ L +
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLIL 143
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 144 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 200
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ +++ L +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLIL 117
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 118 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 75 PI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 127
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 188 WSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 77 PI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 129
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 190 WSFGILLTELTTKGRVP 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI 139
R++A+ + L C +T L V E+++ G L H+ + +E +
Sbjct: 72 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE-----PHAVFY 126
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-I 198
A E+A L +L S I +RD+K N++LD K+ADFG K D VTTK
Sbjct: 127 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXF 181
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE D ++FGV+L E+L G+ P
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+ E + G+L Q L + + E E+ +++ V LAYL I HRD+K
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPE-----EILGKVSIAVLRGLAYLREKHQ--IMHRDVKP 143
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
+NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD++S G
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 226 VVLVELLTGKKPI 238
+ LVEL G+ PI
Sbjct: 201 LSLVELAVGRYPI 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVCEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 87 KSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ N V+LLG +E + L +V E+++ G+L +L R ++ L + L+ + +V
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCE 119
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q ++ T
Sbjct: 120 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---- 172
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
PE + + + KSDV+SFG++L E+ + G+ P
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ +++ L +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLIL 118
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 119 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 132/330 (40%), Gaps = 82/330 (24%)
Query: 34 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-----REDGRI-IA 84
SY+G + ID +L +++ + N+ + LG G G V + +ED + +A
Sbjct: 6 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 65
Query: 85 VK-------------------------KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQH 119
VK + +N V LLG C L++ E+ G L
Sbjct: 66 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 125
Query: 120 LHDRL-----------QNQEF-------PLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
L + Q+ E PL L +++VA +A+L AS HR
Sbjct: 126 LRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHR 182
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSD 220
D+ + N+LL + AK+ DFG ++ I D ++ + ++ PE T +SD
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 242
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V+S+G++L E IFS G + + ++ Y ++ D G +
Sbjct: 243 VWSYGILLWE-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMA 281
Query: 281 IMAFA-----NLAERCLDLNGKKRPTMEEV 305
AFA ++ + C L RPT +++
Sbjct: 282 QPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK------------------------KSKNAVKLLGCC 98
+G+G G V+KG+ +++A+K S K G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
L+ ++ E++ G+ L + PL I E+ L YLHS
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRDIK+ N+LL E K+ADFG + + Q T + GT ++ PE + S K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 184
Query: 219 SDVYSFGVVLVELLTGKKP 237
+D++S G+ +EL G+ P
Sbjct: 185 ADIWSLGITAIELARGEPP 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA----------- 91
S+++ + + R +G+G G V++G+ +A+K KN
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 92 -------------VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLR 138
VKL+G E V ++ E + G L LQ +++ L +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLIL 120
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 198
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ + +K
Sbjct: 121 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK------------------------KSKNAVKLLGCC 98
+G+G G V+KG+ +++A+K S K G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
L+ ++ E++ G+ L + PL I E+ L YLHS
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSEKK--- 145
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRDIK+ N+LL E K+ADFG + + Q T + GT ++ PE + S K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 204
Query: 219 SDVYSFGVVLVELLTGKKP 237
+D++S G+ +EL G+ P
Sbjct: 205 ADIWSLGITAIELARGEPP 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E++ +G L D LQ L L ++++ + YL S HRD+ +
Sbjct: 103 LVMEYLPSGCL----RDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAA 155
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLDPEYHQSSQLTDKSDVYS 223
NIL++ K+ADFG +K + +D+ + + G + PE + + +SDV+S
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 224 FGVVLVELLT 233
FGVVL EL T
Sbjct: 216 FGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E++ +G L D LQ L L ++++ + YL S HRD+ +
Sbjct: 91 LVMEYLPSGCL----RDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAA 143
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLDPEYHQSSQLTDKSDVYS 223
NIL++ K+ADFG +K + +D+ + + G + PE + + +SDV+S
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 224 FGVVLVELLT 233
FGVVL EL T
Sbjct: 204 FGVVLYELFT 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ V N VKL +ETE L LV E+ S G ++ +L H R++ +E +
Sbjct: 65 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF 119
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S T
Sbjct: 120 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPI 238
G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ V N VKL +ETE L LV E+ S G ++ +L H R++ +E +
Sbjct: 65 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF 119
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S T
Sbjct: 120 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPI 238
G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ V N VKL +ETE L LV E+ S G ++ +L H R++ +E +
Sbjct: 65 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF 119
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S T
Sbjct: 120 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPI 238
G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 87 KSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
+ N V+LLG +E + L +V E+++ G+L +L R ++ L + L+ + +V
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCE 113
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q ++ T
Sbjct: 114 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---- 166
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
PE + + + KSDV+SFG++L E+ + G+ P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ V N VKL +ETE L LV E+ S G ++ +L H R++ +E +
Sbjct: 65 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF 119
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S +
Sbjct: 120 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDE 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPI 238
G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI 139
R++A+ + L C +T L V E+++ G L H+ + +E +
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-----PQAVFY 125
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 199
A E++ L +LH I +RD+K N++LD K+ADFG K MD T +
Sbjct: 126 AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFC 181
Query: 200 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE D +++GV+L E+L G+ P
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVMEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 64 LGQGGQGTV-YKGMREDGRIIAVKK-----------------------SKNAVKLLGCCL 99
+G+G G V +R G+++AVKK +N V++ L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 100 ETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +V EF+ G L + H R+ ++ + V AL+ LH+ +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLHAQG---V 137
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSSQLT 216
HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
+ D++S G++++E++ G+ P F+
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI 139
R++A+ + L C +T L V E+++ G L H+ + +E +
Sbjct: 393 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE-----PHAVFY 447
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-I 198
A E+A L +L S I +RD+K N++LD K+ADFG K D VTTK
Sbjct: 448 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXF 502
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE D ++FGV+L E+L G+ P
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 58 FNVNRILGQGGQGTVYKGMR----EDGRIIAVKKSKNAVKLLGC------------CLET 101
F + R+LG+GG G V++ + G+I A+K K A+ + E
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 102 EVPL---LVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--------LRIATEVAGALAYL 150
+ P L+Y F + G LY L + L E + E E++ AL +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLIL-EYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
H I +RD+K NI+L+ + K+ DFG K D T VT GT Y+ PE
Sbjct: 138 HQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEIL 193
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
S D +S G ++ ++LTG P F+ N
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP-FTGEN 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 64 LGQGGQGTV-YKGMREDGRIIAVKK-----------------------SKNAVKLLGCCL 99
+G+G G V +R G+++AVKK +N V++ L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 100 ETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +V EF+ G L + H R+ ++ + V AL+ LH+ +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLHAQG---V 146
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSSQLT 216
HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
+ D++S G++++E++ G+ P F+
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ E+ S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E ++ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 92/224 (41%), Gaps = 23/224 (10%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ I+A S V+L + +V E++ G L + + N + P W R
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV----NLMSNYDVPEKW-ARF 177
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
A EV AL +HS HRD+K N+LLD+ K+ADFGT + +
Sbjct: 178 YTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 198 IQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
GT Y+ PE + SQ D + D +S GV L E+L G P ++ SL
Sbjct: 234 AVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLV 284
Query: 253 AYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNG 296
+ M DD + KN I AF E L NG
Sbjct: 285 GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 328
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 38 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGC 97
SV+ RC + + L+ A N ++ + ++ + + RI + N V+L
Sbjct: 43 SVVRRC-VHKTTGLEFAAKIINTKKLSARD-----FQKLEREARICRKLQHPNIVRLHDS 96
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
E LV++ ++ G L++ + R E + ++ ++AY HS
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSNG--- 148
Query: 158 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
I HR++K N+LL + + K+ADFG + I ++ + GT GYL PE +
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIF 239
+ D+++ GV+L LL G P +
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFW 231
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---F 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 64 LGQGGQGTV-YKGMREDGRIIAVKK-----------------------SKNAVKLLGCCL 99
+G+G G V +R G+++AVKK +N V++ L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 100 ETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +V EF+ G L + H R+ ++ + V AL+ LH+ +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLHAQG---V 148
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSSQLT 216
HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
+ D++S G++++E++ G+ P F+
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 20/237 (8%)
Query: 75 GMREDGRIIAVKKSKNAVKLLGCCLETEVP--LLVYEFISNGTLYQHLHDRLQNQEFPLT 132
G +++ I+ ++ +K GCC + LV E++ G+L D L L
Sbjct: 79 GWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL----RDYLPRHSIGLA 134
Query: 133 WEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 192
L A ++ +AYLH+ HRD+ + N+LLD K+ DFG +K +
Sbjct: 135 --QLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189
Query: 193 HVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+ G F Y PE + + SDV+SFGV L ELLT S E +
Sbjct: 190 XYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248
Query: 250 SLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA-FANLAERCLDLNGKKRPTMEEV 305
+A M RL ++L ++ +L + ++ A +L + C + RPT E +
Sbjct: 249 GIAQ---GQMTVLRLTELL-ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 58 FNVNRILGQGGQGTVYKGMR----EDGRIIAVKKSKNAVKLLGC------------CLET 101
F + R+LG+GG G V++ + G+I A+K K A+ + E
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 102 EVPL---LVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--------LRIATEVAGALAYL 150
+ P L+Y F + G LY L + L E + E E++ AL +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLIL-EYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 151 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
H I +RD+K NI+L+ + K+ DFG K D T VT GT Y+ PE
Sbjct: 138 HQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEIL 193
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
S D +S G ++ ++LTG P F+ N
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP-FTGEN 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVTEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E++ +G L D LQ L L ++++ + YL S HRD+ +
Sbjct: 87 LVMEYLPSGCL----RDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAA 139
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLDPEYHQSSQLTDKSDVYS 223
NIL++ K+ADFG +K + +D+ + G + PE + + +SDV+S
Sbjct: 140 RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 224 FGVVLVELLT 233
FGVVL EL T
Sbjct: 200 FGVVLYELFT 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 108/280 (38%), Gaps = 56/280 (20%)
Query: 62 RILGQGGQGTVYKGMRED---GRI---IAVKK------------------------SKNA 91
R LGQG G VY+G D G +AVK +
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----FPLTWEMRLRIATEVAGA 146
V+LLG + + L+V E +++G L +L E P T + +++A E+A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYL 205
+AYL++ HRD+ + N ++ + K+ DFG ++ I D K ++
Sbjct: 142 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLY 265
PE + T SD++SFGVVL E+ SLA + ++
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEI-----------------TSLAEQPYQGLSNEQVL 241
Query: 266 DILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ D N +L C N K RPT E+
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH--SAASSPIYHRDI 163
+V E+ G L + + +++ L E LR+ T++ AL H S + HRD+
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQY-LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N+ LD + K+ DFG ++ + D T GT Y+ PE +KSD++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 224 FGVVLVELLTGKKPIFSA 241
G +L E L P F+A
Sbjct: 202 LGCLLYE-LCALMPPFTA 218
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 64 LGQGGQGTV-YKGMREDGRIIAVKK-----------------------SKNAVKLLGCCL 99
+G+G G V +R G+++AVKK +N V++ L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 100 ETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +V EF+ G L + H R+ ++ + V AL+ LH+ +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLHAQG---V 141
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSSQLT 216
HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
+ D++S G++++E++ G+ P F+
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L L + +A ++A +AY+ HR
Sbjct: 76 PI-XIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 128
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 189 WSFGILLTELTTKGRVP 205
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 64 LGQGGQGTV-YKGMREDGRIIAVKK-----------------------SKNAVKLLGCCL 99
+G+G G V +R G+++AVKK +N V++ L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 100 ETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +V EF+ G L + H R+ ++ + V AL+ LH+ +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLHAQG---V 191
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSSQLT 216
HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
+ D++S G++++E++ G+ P F+
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 92/224 (41%), Gaps = 23/224 (10%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ I+A S V+L + +V E++ G L + + N + P W R
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV----NLMSNYDVPEKW-ARF 172
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
A EV AL +HS HRD+K N+LLD+ K+ADFGT + +
Sbjct: 173 YTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 198 IQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
GT Y+ PE + SQ D + D +S GV L E+L G P ++ SL
Sbjct: 229 AVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLV 279
Query: 253 AYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNG 296
+ M DD + KN I AF E L NG
Sbjct: 280 GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 323
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 64 LGQGGQGTV-YKGMREDGRIIAVKK-----------------------SKNAVKLLGCCL 99
+G+G G V +R G+++AVKK +N V++ L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 100 ETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +V EF+ G L + H R+ ++ + V AL+ LH+ +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLHAQG---V 268
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSSQLT 216
HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
+ D++S G++++E++ G+ P F+
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 23/164 (14%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ + N VKL +ETE L LV E+ S G ++ +L H R++ +E +
Sbjct: 66 RIMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKF 120
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K
Sbjct: 121 R---QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS-----NEFTVGNK 169
Query: 198 IQ---GTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 237
+ G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 170 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 92/224 (41%), Gaps = 23/224 (10%)
Query: 78 EDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRL 137
E+ I+A S V+L + +V E++ G L + + N + P W R
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV----NLMSNYDVPEKW-ARF 177
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
A EV AL +HS HRD+K N+LLD+ K+ADFGT + +
Sbjct: 178 YTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 198 IQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
GT Y+ PE + SQ D + D +S GV L E+L G P ++ SL
Sbjct: 234 AVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLV 284
Query: 253 AYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNG 296
+ M DD + KN I AF E L NG
Sbjct: 285 GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 328
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 48/247 (19%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ + N VKL +ETE L L+ E+ S G ++ +L H R++ +E +
Sbjct: 63 RIMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE----ARSKF 117
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K
Sbjct: 118 R---QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGK 166
Query: 198 IQ---GTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPIFSAGN---------- 243
+ G+ Y PE Q + + DV+S GV+L L++G P F N
Sbjct: 167 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR 225
Query: 244 ----------TSQENVSLAAYFVHSMRKNRLYDILDDQVMKLG-KKNQIMAFANLAERCL 292
T EN+ ++ +++ L I+ D+ + G +++++ F E L
Sbjct: 226 GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPF---VEPEL 282
Query: 293 DLNGKKR 299
D++ +KR
Sbjct: 283 DISDQKR 289
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 41/227 (18%)
Query: 63 ILGQGGQGTVYKGMREDGRI-IAVK-----------------------KSKNAVKLLGCC 98
+LG+G G VY G ++ IA+K K KN V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 99 LETEVPLLVYEFISNGTLYQHLHDR---LQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
E + E + G+L L + L++ E + + + ++ L YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHD--- 140
Query: 156 SPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
+ I HRDIK N+L++ Y K++DFGTSK +A T GT Y+ PE
Sbjct: 141 NQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKG 198
Query: 214 Q--LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHS 258
+D++S G ++E+ TGK P + G + + VH
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 58 FNVNRILGQGGQGTVYK------GMREDGRII---------AVKKSKNAVKLLGCCL--- 99
F V +LG+G VY+ G+ ++I V++ +N VK+ C L
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI-HCQLKHP 71
Query: 100 ----------ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
++ LV E NG + ++L +R++ P + ++ + Y
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK----PFSENEARHFMHQIITGMLY 127
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD-QTHVTTKIQGTFGYLDPE 208
LHS I HRD+ +N+LL K+ADFG + + M + H T + GT Y+ PE
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
S +SDV+S G + LL G+ P
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 36 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 86
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 87 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 139
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH--SAASSPIYHRDI 163
+V E+ G L + + +++ L E LR+ T++ AL H S + HRD+
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQY-LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N+ LD + K+ DFG ++ + D+ + GT Y+ PE +KSD++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 224 FGVVLVELLTGKKPIFSA 241
G +L E L P F+A
Sbjct: 202 LGCLLYE-LCALMPPFTA 218
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 63 ILGQGGQGTVYKGMREDGRI-IAVK-----------------------KSKNAVKLLGCC 98
+LG+G G VY G ++ IA+K K KN V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 99 LETEVPLLVYEFISNGTLYQHLHDR---LQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
E + E + G+L L + L++ E + + + ++ L YLH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHD--- 126
Query: 156 SPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
+ I HRDIK N+L++ K++DFGTSK +A T GT Y+ PE
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 185
Query: 215 --LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHS 258
+D++S G ++E+ TGK P + G + + VH
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 253 PI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 305
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG + I ++ + + PE + T KSDV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 366 WSFGILLTELTTKGRVP 382
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 53 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 103
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 104 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 156
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 216
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 217 SASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
N ++L G + ++V E++ NG+L L R + +F + +++ + G A
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTI-----MQLVGMLRGVGA 162
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLD 206
+ + HRD+ + N+L+D KV+DFG S+ + D T G +
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTA 222
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
PE + SDV+SFGVV+ E+L G++P ++ N
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L + L + +A ++A +AY+ HR
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+ + NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 38 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGC 97
SV+ RC + + L+ A N ++ + ++ + + RI + N V+L
Sbjct: 20 SVVRRC-VHKTTGLEFAAKIINTKKLSARD-----FQKLEREARICRKLQHPNIVRLHDS 73
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
E LV++ ++ G L++ + R E + ++ ++AY HS
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSNG--- 125
Query: 158 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
I HR++K N+LL + + K+ADFG + I ++ + GT GYL PE +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIF 239
+ D+++ GV+L LL G P +
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 38 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGC 97
SV+ RC + + L+ A N ++ + ++ + + RI + N V+L
Sbjct: 20 SVVRRC-VHKTTGLEFAAKIINTKKLSARD-----FQKLEREARICRKLQHPNIVRLHDS 73
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
E LV++ ++ G L++ + R E + ++ ++AY HS
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSNG--- 125
Query: 158 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
I HR++K N+LL + + K+ADFG + I ++ + GT GYL PE +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIF 239
+ D+++ GV+L LL G P +
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFW 208
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 105 LLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
+V E+ G L+ ++ DRL +E + + ++ A+AY+HS + HRD
Sbjct: 84 FMVLEYCPGGELFDYIISQDRLSEEETRVVFR-------QIVSAVAYVHSQGYA---HRD 133
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-SQLTDKSDV 221
+K N+L DE ++ K+ DFG ++ + G+ Y PE Q S L ++DV
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADV 193
Query: 222 YSFGVVLVELLTGKKP 237
+S G++L L+ G P
Sbjct: 194 WSMGILLYVLMCGFLP 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 56/297 (18%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
++ E + + + R LGQG G VY+G D G +AVK
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA- 188
P T + +++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
D K ++ PE + T SD++SFGVVL E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------------- 225
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N RPT E+
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 63 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 113
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 114 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 166
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 227 SASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 60 VNRILGQGGQGTVYKGM----REDGRIIAVKKSKNA------------------------ 91
+ R +G+G G V++G+ +A+K KN
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 92 VKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
VKL+G E V ++ E + G L LQ +++ L + A +++ ALAYL
Sbjct: 71 VKLIGVITENPV-WIIMELCTLG----ELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 211
S HRDI + N+L+ K+ DFG S+++ + +K + ++ PE
Sbjct: 126 SKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 212 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ T SDV+ FGV + E+L G KP N
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 38 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGC 97
SV+ RC + + L+ A N ++ + ++ + + RI + N V+L
Sbjct: 19 SVVRRC-VHKTTGLEFAAKIINTKKLSARD-----FQKLEREARICRKLQHPNIVRLHDS 72
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
E LV++ ++ G L++ + R E + ++ ++AY HS
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSNG--- 124
Query: 158 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
I HR++K N+LL + + K+ADFG + I ++ + GT GYL PE +
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIF 239
+ D+++ GV+L LL G P +
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFW 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L L + +A ++A +AY+ HR
Sbjct: 79 PI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 131
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 192 WSFGILLTELTTKGRVP 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
N ++L G + ++V E++ NG+L L R + +F + +++ + G A
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTI-----MQLVGMLRGVGA 162
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA--MDQTHVTTKIQGTFGYLD 206
+ + HRD+ + N+L+D KV+DFG S+ + D + TT + +
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
PE + SDV+SFGVV+ E+L G++P ++ N
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 48/247 (19%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ + N VKL +ETE L L+ E+ S G ++ +L H R++ +E +
Sbjct: 66 RIMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE----ARSKF 120
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K
Sbjct: 121 R---QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGK 169
Query: 198 IQGTFG---YLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPIFSAGN---------- 243
+ G Y PE Q + + DV+S GV+L L++G P F N
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR 228
Query: 244 ----------TSQENVSLAAYFVHSMRKNRLYDILDDQVMKLG-KKNQIMAFANLAERCL 292
T EN+ ++ +++ L I+ D+ + G +++++ F E L
Sbjct: 229 GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPF---VEPEL 285
Query: 293 DLNGKKR 299
D++ +KR
Sbjct: 286 DISDQKR 292
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ V N VKL +ETE L LV E+ S G ++ +L H R++ +E +
Sbjct: 65 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----ARAKF 119
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S
Sbjct: 120 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDA 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPI 238
G Y PE Q + + DV+S GV+L L++G P
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 20/237 (8%)
Query: 75 GMREDGRIIAVKKSKNAVKLLGCCLET-EVPL-LVYEFISNGTLYQHLHDRLQNQEFPLT 132
G +++ I+ ++ +K GCC + E L LV E++ G+L D L L
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL----RDYLPRHSIGLA 117
Query: 133 WEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 192
L A ++ +AYLHS HR++ + N+LLD K+ DFG +K +
Sbjct: 118 --QLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 193 HVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+ + G F Y PE + + SDV+SFGV L ELLT S E +
Sbjct: 173 YYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 231
Query: 250 SLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA-FANLAERCLDLNGKKRPTMEEV 305
+A M RL ++L ++ +L + ++ +L + C + RPT E +
Sbjct: 232 GIAQ---GQMTVLRLTELL-ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 44/230 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKG-MREDGR---IIAVKKSK-------------- 89
+KE+D ++ + ++G G G V +G ++ G+ +A+K K
Sbjct: 8 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 65
Query: 90 ----------NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI 139
N ++L G + +++ EF+ NG L L RL + +F + +++
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTV-----IQL 118
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTT 196
+ G + + A HRD+ + NIL++ KV+DFG S+F+ + D T+ T+
Sbjct: 119 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TS 177
Query: 197 KIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ G + PE + T SD +S+G+V+ E+++ G++P + N
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L L + +A ++A +AY+ HR
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 365 WSFGILLTELTTKGRVP 381
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E + NG+L L R + +F + + + +A + YL +
Sbjct: 116 TKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMGA--- 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ + S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L L + +A ++A +AY+ HR
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 365 WSFGILLTELTTKGRVP 381
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N +KL + + LV EF G L++ + +R + E I ++ + Y
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-----NIMKQILSGICY 161
Query: 150 LHSAASSPIYHRDIKSTNILLDER---YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
LH I HRDIK NILL+ + K+ DFG S F + D + GT Y+
Sbjct: 162 LHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGTAYYIA 216
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
PE + + +K DV+S GV++ LL G P G Q+
Sbjct: 217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF--GGQNDQD 254
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L L + +A ++A +AY+ HR
Sbjct: 335 PI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 387
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 448 WSFGILLTELTTKGRVP 464
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK------------------------KSKNAVKLLGCC 98
+G+G G V+KG+ +++A+K S K G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
L+ ++ E++ G+ L + PL I E+ L YLHS
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSEKK--- 140
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRDIK+ N+LL E K+ADFG + + Q + GT ++ PE + S K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 199
Query: 219 SDVYSFGVVLVELLTGKKP 237
+D++S G+ +EL G+ P
Sbjct: 200 ADIWSLGITAIELARGEPP 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 189
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 95 LGCCLETEVPLL-VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
L C +TE L V E+++ G L H+ + + L E + E++ AL YLH
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHER 140
Query: 154 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 141 G---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRL 264
D ++ GV++ E++ G+ P G++ + + Y + + ++
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 247
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK------------------------KSKNAVKLLGCC 98
+G+G G V+KG+ +++A+K S K G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
L+ ++ E++ G+ L + PL I E+ L YLHS
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRDIK+ N+LL E K+ADFG + + Q + GT ++ PE + S K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 184
Query: 219 SDVYSFGVVLVELLTGKKP 237
+D++S G+ +EL G+ P
Sbjct: 185 ADIWSLGITAIELARGEPP 203
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 85 VKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN-----------QEFPLTW 133
+ K KN + LLG C + ++ + S G L ++L R E +T+
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 134 EMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 192
+ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 193 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
TT + ++ PE T +SDV+SFGV++ E IF+ G + + +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYPGIPVE 266
Query: 253 AYFV-----HSMRK-----NRLYDILDD 270
F H M K N LY ++ D
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 115/294 (39%), Gaps = 86/294 (29%)
Query: 63 ILGQGGQGTVYKGMRE-DGRIIAVKKSKNAVKLLGCCLETEVPLLV-------------- 107
+LGQG G V K D R A+KK ++ + L L +EV LL
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASLNHQYVVRYYAAW 71
Query: 108 ----------------------YEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
E+ N TLY +H NQ+ W R+ ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHVT--- 195
AL+Y+HS I HRD+K NI +DE K+ DFG +K + +D ++
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 196 ---TKIQGTFGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSL 251
T GT Y+ E + +K D+YS G++ E++ FS G E V++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----FSTG---MERVNI 237
Query: 252 AAYFVHSMRKNRLYDI-----LDDQVMKLGKKNQIMAFANLAERCLDLNGKKRP 300
++K R I DD MK+ KK + +D + KRP
Sbjct: 238 -------LKKLRSVSIEFPPDFDDNKMKVEKK--------IIRLLIDHDPNKRP 276
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
N + L G ++ +++ EF+ NG+L L R + +F + +++ + G A
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTV-----IQLVGMLRGIAA 120
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQGTFG--Y 204
+ A HR + + NIL++ KV+DFG S+F+ D + T+ + G +
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 205 LDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 162
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 162
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E++S G+L L L + +A ++A +AY+ HR
Sbjct: 252 PI-YIVGEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 365 WSFGILLTELTTKGRVP 381
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG ++ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 95 LGCCLETEVPLL-VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
L C +TE L V E+++ G L H+ + + L E + E++ AL YLH
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHER 129
Query: 154 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 130 G---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRL 264
D ++ GV++ E++ G+ P G++ + + Y + + ++
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 236
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 95 LGCCLETEVPLL-VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
L C +TE L V E+++ G L H+ + + L E + E++ AL YLH
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHER 172
Query: 154 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 173 G---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRL 264
D ++ GV++ E++ G+ P G++ + + Y + + ++
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
L+ + +S G L+ DR+ + F T R+ +V A+ YLH I HRD+K
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKP 144
Query: 166 TNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+L LDE + ++DFG SK D V + GT GY+ PE + D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQ-ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
S GV+ LL G P + + E + A Y S + + D D + L +K+
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 82 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K D + T GT YL PE + + D + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 193 VVMYEMMCGRLPFYN 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 224
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 95 LGCCLETEVPLL-VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
L C +TE L V E+++ G L H+ + + L E + E++ AL YLH
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLHER 125
Query: 154 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 126 G---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRL 264
D ++ GV++ E++ G+ P G++ + + Y + + ++
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 162
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
L+ + +S G L+ DR+ + F T R+ +V A+ YLH I HRD+K
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKP 144
Query: 166 TNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+L LDE + ++DFG SK D V + GT GY+ PE + D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQ-ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
S GV+ LL G P + + E + A Y S + + D D + L +K+
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 20/237 (8%)
Query: 75 GMREDGRIIAVKKSKNAVKLLGCCLET-EVPL-LVYEFISNGTLYQHLHDRLQNQEFPLT 132
G +++ I+ ++ +K GCC + E L LV E++ G+L D L L
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL----RDYLPRHSIGLA 117
Query: 133 WEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 192
L A ++ +AYLH+ HR++ + N+LLD K+ DFG +K +
Sbjct: 118 --QLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 193 HVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+ + G F Y PE + + SDV+SFGV L ELLT S E +
Sbjct: 173 YYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 231
Query: 250 SLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA-FANLAERCLDLNGKKRPTMEEV 305
+A M RL ++L ++ +L + ++ +L + C + RPT E +
Sbjct: 232 GIAQ---GQMTVLRLTELL-ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
L+ + +S G L+ DR+ + F T R+ +V A+ YLH I HRD+K
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKP 144
Query: 166 TNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+L LDE + ++DFG SK D V + GT GY+ PE + D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQ-ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
S GV+ LL G P + + E + A Y S + + D D + L +K+
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS 162
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
GT Y+ PE Q + + +SD++S G+ LVE+ G+ PI
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 187 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 109 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 161
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 162 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 219 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 85 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 137
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 138 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 195 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 78 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E++ NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG + + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 79 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 189 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 187 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 187 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 36 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 86
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E + NG+L L R + +F + + + +A + YL
Sbjct: 87 TKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 139
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 79 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 189 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 186 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 121
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 122 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 179 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGR-IIAVK-----------KSKNAV 92
+F E D +HF + R +G+G G V + D + + A+K + +N
Sbjct: 5 VFDENE-DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 93 KLLGCCLETEVPLLV---YEF------------ISNGTLYQHLHDRLQNQEFPLTWEMRL 137
K L E P LV Y F + G L HL + +E E
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE-----ETVK 118
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
E+ AL YL + I HRD+K NILLDE + DF + + +T +TT
Sbjct: 119 LFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT- 173
Query: 198 IQGTFGYLDPEYHQSSQLTDKS---DVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+ GT Y+ PE S + S D +S GV ELL G++P +TS + +
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 44/230 (19%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKG-MREDGR---IIAVKKSK-------------- 89
+KE+D ++ + ++G G G V +G ++ G+ +A+K K
Sbjct: 10 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 67
Query: 90 ----------NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRI 139
N ++L G + +++ EF+ NG L L RL + +F + +++
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTV-----IQL 120
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTT 196
+ G + + A HRD+ + NIL++ KV+DFG S+F+ + D T T+
Sbjct: 121 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE-TS 179
Query: 197 KIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+ G + PE + T SD +S+G+V+ E+++ G++P + N
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTL-----YQHLHDRLQNQ 127
Y + + +II K++ + G + ++YE++ N ++ Y + D+
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 128 EFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 187
P+ ++ I V + +Y+H+ + I HRD+K +NIL+D+ R K++DFG S+++
Sbjct: 147 FIPI--QVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 188 AMDQTHVTTKIQ---GTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
V KI+ GT+ ++ PE+ ++SS K D++S G+ L + P
Sbjct: 203 ------VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI+ V N VKL +ETE L LV E+ S G ++ +L H ++ +E +
Sbjct: 58 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA----RAKF 112
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S T
Sbjct: 113 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 164
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPI 238
G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 79 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 132
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 220 DVYSFGVVLVELLT-GKKP 237
DV+SFG++L E++T G+ P
Sbjct: 193 DVWSFGILLTEIVTHGRIP 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALA 148
N V + L + +V EF+ G L + H R+ ++ + V AL+
Sbjct: 103 NVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------ATVCLSVLRALS 155
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLD 206
YLH+ + HRDIKS +ILL R K++DFG F A V + + GT ++
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMA 209
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
PE + D++S G++++E++ G+ P F+ + +MR R+ D
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP------------LQAMR--RIRD 255
Query: 267 ILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNG 311
L +V L K + ++ LDL + P+ + EL G
Sbjct: 256 SLPPRVKDLHKVSSVL------RGFLDLMLVREPSQRATAQELLG 294
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 85 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 136
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K D + T GT YL PE + + D + G
Sbjct: 137 ENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 196 VVMYEMMCGRLPFYN 210
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
L+ + +S G L+ DR+ + F T R+ +V A+ YLH I HRD+K
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKP 144
Query: 166 TNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+L LDE + ++DFG SK D V + GT GY+ PE + D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQ-ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
S GV+ LL G P + + E + A Y S + + D D + L +K+
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 192 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 186 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 42 RCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMRE---DGRIIAVKKSKNAVKLLGCC 98
R KL S KE+ A V G K R+ + I+ N ++L G
Sbjct: 65 RLKLPSKKEISVAIKTLKV---------GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++ ++V E + NG+L L R + +F + + + +A + YL
Sbjct: 116 TKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVI--QLVGMLRGIASGMKYLSDMG---Y 168
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEYHQSSQLT 216
HRD+ + NIL++ KV+DFG S+ + D T G + PE + T
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 217 DKSDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+S+G+VL E+++ G++P + N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 80 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 133
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 194 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+++ V L YL I HRD+K +NIL++ R K+ DFG S + +D+ + +
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDE--MANE 165
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
GT Y+ PE Q + + +SD++S G+ LVE+ G+ P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 82 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K D + T GT YL PE + + D + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 193 VVMYEMMCGRLPFYN 207
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 72 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 124
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 125 EGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 182 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 81 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 133
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 134 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 187 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 73 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 126
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 187 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 187 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 100 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 152
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 153 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 210 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 24/269 (8%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLET--E 102
L+ + T + L +G + G + + I+ ++ VK GCC + +
Sbjct: 27 LYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEK 86
Query: 103 VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
LV E++ G+L D L L L A ++ +AYLH+ HR
Sbjct: 87 SVQLVMEYVPLGSL----RDYLPRHCVGLA--QLLLFAQQICEGMAYLHAQH---YIHRA 137
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKS 219
+ + N+LLD K+ DFG +K + + + G F Y PE + + S
Sbjct: 138 LAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKECKFYYAS 196
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQEN--VSLAAYFVHSMRKNRLYDILDDQVMKLGK 277
DV+SFGV L ELLT + N S L + M RL ++L ++ +L +
Sbjct: 197 DVWSFGVTLYELLT-----YCDSNQSPHTKFTELIGHTQGQMTVLRLTELL-ERGERLPR 250
Query: 278 KNQIMA-FANLAERCLDLNGKKRPTMEEV 305
++ +L + C + RPT + +
Sbjct: 251 PDRCPCEIYHLMKNCWETEASFRPTFQNL 279
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 88 SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
SKN+ + CL + EF GTL Q + R + L + L + ++ +
Sbjct: 98 SKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFEQITKGV 149
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 207
Y+HS + HRD+K +NI L + + K+ DFG + D T+ +GT Y+ P
Sbjct: 150 DYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSP 204
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELL 232
E S + D+Y+ G++L ELL
Sbjct: 205 EQISSQDYGKEVDLYALGLILAELL 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 24/269 (8%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLET--E 102
L+ + T + L +G + G + + I+ ++ VK GCC + +
Sbjct: 26 LYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEK 85
Query: 103 VPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
LV E++ G+L D L L L A ++ +AYLH+ HR
Sbjct: 86 SVQLVMEYVPLGSL----RDYLPRHCVGLA--QLLLFAQQICEGMAYLHAQH---YIHRA 136
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKS 219
+ + N+LLD K+ DFG +K + + + G F Y PE + + S
Sbjct: 137 LAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKECKFYYAS 195
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQEN--VSLAAYFVHSMRKNRLYDILDDQVMKLGK 277
DV+SFGV L ELLT + N S L + M RL ++L ++ +L +
Sbjct: 196 DVWSFGVTLYELLT-----YCDSNQSPHTKFTELIGHTQGQMTVLRLTELL-ERGERLPR 249
Query: 278 KNQIMA-FANLAERCLDLNGKKRPTMEEV 305
++ +L + C + RPT + +
Sbjct: 250 PDRCPCEIYHLMKNCWETEASFRPTFQNL 278
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 87 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 201 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 220 DVYSFGVVLVELLT-GKKP 237
DV+SFG++L E++T G+ P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++LG G GTVYKG+ ++ ++A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 31/230 (13%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LG G G V+ G + +AVK K V+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
E ++ EF++ G+L L ++ + + + ++A +AY+ HR
Sbjct: 80 EPIYIITEFMAKGSLLDFLK---SDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHR 133
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ N+L+ E K+ADFG ++ I ++ + + PE T KS+V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 222 YSFGVVLVELLT-GKKPIFSAGNTSQENVSLAAYFVHSMR--KNRLYDIL 268
+SFG++L E++T GK P N + Y + M + LYDI+
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIM 243
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 192 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 220
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 220 DVYSFGVVLVELLT-GKKP 237
DV+SFG++L E++T G+ P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 89/233 (38%), Gaps = 51/233 (21%)
Query: 47 SSKELDKATNHFNVN-----RILGQGGQGTVYKG-------------------------- 75
SS D T HF ++ R LG+G G VY
Sbjct: 9 SSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 68
Query: 76 -MREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWE 134
+R + I A N ++L + L+ E+ G LY+ L E +
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE-----Q 123
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
I E+A AL Y H + HRDIK N+LL + K+ADFG S H
Sbjct: 124 RTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWS-------VHA 173
Query: 195 TT----KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
+ + GT YL PE + +K D++ GV+ ELL G P SA +
Sbjct: 174 PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASH 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 220 DVYSFGVVLVELLT-GKKP 237
DV+SFG++L E++T G+ P
Sbjct: 200 DVWSFGILLTEIVTHGRIP 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 84 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 198 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 83 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 136
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 220 DVYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
DV+SFG++L E++T G+ P G T+ E +
Sbjct: 197 DVWSFGILLTEIVTHGRIPY--PGMTNPEVI 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E+++ G+L L L + ++ ++A +AY+ HR
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKGETGKY---LRLPQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 196 WSFGILLTELTTKGRVP 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 40/231 (17%)
Query: 81 RIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRL 137
RI V N VKL +ETE L LV E+ S G ++ +L H R + +E +
Sbjct: 65 RIXKVLNHPNIVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE----ARAKF 119
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S
Sbjct: 120 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDA 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKPIFSAGNTSQ--ENVSLAAY 254
G Y PE Q + + DV+S GV+L L++G P F N + E V Y
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKY 230
Query: 255 FVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ Y D + NL ++ L LN KR T+E++
Sbjct: 231 RIP------FYXSTDCE--------------NLLKKFLILNPSKRGTLEQI 261
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 106 LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRI-ATEVAGALAYLHSAASSPIYHRDI 163
V E+ + G L+ HL +R+ +++ R R E+ AL YLHS + + +RD+
Sbjct: 225 FVMEYANGGELFFHLSRERVFSED-------RARFYGAEIVSALDYLHSEKN--VVYRDL 275
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N++LD+ K+ DFG K D + T GT YL PE + + D +
Sbjct: 276 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWG 334
Query: 224 FGVVLVELLTGKKPIFS 240
GVV+ E++ G+ P ++
Sbjct: 335 LGVVMYEMMCGRLPFYN 351
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 35/212 (16%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK------------------------KSKNAVKLLGCC 98
LG G TVYKG+ + G +A+K K +N V+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV- 71
Query: 99 LETEVPL-LVYEFISNGTLYQHLHDR-LQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ N L +++ R + N L + ++ LA+ H +
Sbjct: 72 IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---N 127
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+L+++R + K+ DFG ++ + ++++ T Y P+ S+
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTY 186
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQE 247
S D++S G +L E++TG KP+F N ++
Sbjct: 187 STSIDIWSCGCILAEMITG-KPLFPGTNDEEQ 217
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 106 LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRI-ATEVAGALAYLHSAASSPIYHRDI 163
V E+ + G L+ HL +R+ +++ R R E+ AL YLHS + + +RD+
Sbjct: 228 FVMEYANGGELFFHLSRERVFSED-------RARFYGAEIVSALDYLHSEKN--VVYRDL 278
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N++LD+ K+ DFG K D + T GT YL PE + + D +
Sbjct: 279 KLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWG 337
Query: 224 FGVVLVELLTGKKPIFS 240
GVV+ E++ G+ P ++
Sbjct: 338 LGVVMYEMMCGRLPFYN 354
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LGQG G V+ G +A+K K V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
+ +V E+++ G+L L L + ++ ++A +AY+ HR
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKGETGKY---LRLPQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ NIL+ E KVADFG ++ I ++ + + PE + T KSDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 222 YSFGVVLVELLT-GKKP 237
+SFG++L EL T G+ P
Sbjct: 196 WSFGILLTELTTKGRVP 212
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 220 DVYSFGVVLVELLT-GKKP 237
DV+SFG++L E++T G+ P
Sbjct: 202 DVWSFGILLTEIVTHGRIP 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LG G G V+ G +AVK K V+L T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV--T 78
Query: 102 EVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
+ P+ ++ E++ NG+L L LT L +A ++A +A++ H
Sbjct: 79 QEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
RD+++ NIL+ + K+ADFG ++ I + + + PE T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 221 VYSFGVVLVELLT-GKKPIFSAGNTSQENV 249
V+SFG++L E++T G+ P G T+ E +
Sbjct: 193 VWSFGILLTEIVTHGRIPY--PGMTNPEVI 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 SVIDRC-KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLG 96
SV+ RC KL + E A N ++ + Q + + RI + K N V+L
Sbjct: 18 SVVRRCVKLCTGHEY--AAKIINTKKLSARDHQK-----LEREARICRLLKHSNIVRLHD 70
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
E LV++ ++ G L++ + R E + ++ A+ + H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQMG-- 123
Query: 157 PIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
+ HRD+K N+LL + + K+ADFG + + DQ GT GYL PE +
Sbjct: 124 -VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKE 181
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIF 239
D+++ GV+L LL G P +
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFW 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 56/297 (18%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
++ E + + + R LGQG G VY+G D G +AVK
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P T + +++A E+A +AYL++ HR++ + N ++ + K+ DFG ++ I
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
D K ++ PE + T SD++SFGVVL E+
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------------- 226
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N RPT E+
Sbjct: 227 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 56/297 (18%)
Query: 45 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMRED---GRI---IAVKK----------- 87
++ E + + + R LGQG G VY+G D G +AVK
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 88 -------------SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE-----F 129
+ V+LLG + + L+V E +++G L +L E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 188
P T + +++A E+A +AYL++ HR++ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 189 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
D K ++ PE + T SD++SFGVVL E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------------- 225
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
SLA + ++ + D N +L C N RPT E+
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 44/211 (20%)
Query: 58 FNVNRILGQGGQGTVYKGM-REDGRIIAVKKSK-------------------NAVKLLGC 97
F ++G GG G V+K R DG+ +K+ K N V GC
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 98 C----------------LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
+T+ + EF GTL Q + R + L + L +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFE 129
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
++ + Y+HS + +RD+K +NI L + + K+ DFG + D +K GT
Sbjct: 130 QITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK--GT 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 232
Y+ PE S + D+Y+ G++L ELL
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 87 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 138
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K + GT YL PE + + D + G
Sbjct: 139 ENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 198 VVMYEMMCGRLPFYN 212
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 82 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K + GT YL PE + + D + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 193 VVMYEMMCGRLPFYN 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 82 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K + GT YL PE + + D + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 193 VVMYEMMCGRLPFYN 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
V E+ + G L+ HL ++E T E E+ AL YLHS + +RDIK
Sbjct: 82 FVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKL 133
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N++LD+ K+ DFG K + GT YL PE + + D + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 226 VVLVELLTGKKPIFS 240
VV+ E++ G+ P ++
Sbjct: 193 VVMYEMMCGRLPFYN 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 105 LLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
+V E++S G L+ ++ H R++ E R+ ++ A+ Y H + HRD
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEME-------ARRLFQQILSAVDYCHRHM---VVHRD 136
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL--TDKSD 220
+K N+LLD AK+ADFG S ++ D + T G+ Y PE S +L + D
Sbjct: 137 LKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSC-GSPNYAAPEV-ISGRLYAGPEVD 193
Query: 221 VYSFGVVLVELLTGKKP 237
++S GV+L LL G P
Sbjct: 194 IWSCGVILYALLCGTLP 210
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 33/230 (14%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR----LQNQEFPLTWEMRL-------- 137
N V LLG C L++ E+ G L L + + ++ P E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 138 -RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
+ +VA +A+L AS HRD+ + NILL K+ DFG ++ I D +V
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 197 -KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
+ ++ PE + T +SDV+S+G+ L EL FS G++ + +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-------FSLGSSPYPGMPV---- 276
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ Y ++ + L ++ ++ + C D + KRPT +++
Sbjct: 277 -----DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 112/298 (37%), Gaps = 69/298 (23%)
Query: 56 NHFNVNRILGQGGQGTVYK------GMREDGRIIAVKK---------------------- 87
N ++G+G G V K G+R D I +K+
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 88 SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-----------LTWEMR 136
N + LLG C L E+ +G L L + P L+ +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
L A +VA + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK 197
Query: 197 KIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
K G ++ E S T SDV+S+GV+L E I S G T ++ A
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMTCAEL 250
Query: 255 FVHSMRKNRLYDIL--DDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELN 310
+ + RL L DD+V +L +C +RP+ ++ + LN
Sbjct: 251 YEKLPQGYRLEKPLNCDDEVY------------DLMRQCWREKPYERPSFAQILVSLN 296
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 101 TEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
T+ P+ ++ E++ NG+L L LT L +A ++A +A++
Sbjct: 74 TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 127
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HR++++ NIL+ + K+ADFG ++ I ++ + + PE T KS
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 220 DVYSFGVVLVELLT-GKKP 237
DV+SFG++L E++T G+ P
Sbjct: 188 DVWSFGILLTEIVTHGRIP 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++L G GTVYKG+ ++ ++A
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L++ + + G L ++ + N ++ L W ++A
Sbjct: 82 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 22/146 (15%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV+E + G++ H+H R E + + +VA AL +LH+ I HRD+K
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHNKG---IAHRDLKP 139
Query: 166 TNILLDERYR---AKVADFGTSKFIAM--DQTHVTTK----IQGTFGYLDPE----YHQS 212
NIL + + K+ DFG I + D + ++T G+ Y+ PE + +
Sbjct: 140 ENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 213 SQLTDK-SDVYSFGVVLVELLTGKKP 237
+ + DK D++S GV+L LL+G P
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 112/298 (37%), Gaps = 69/298 (23%)
Query: 56 NHFNVNRILGQGGQGTVYK------GMREDGRIIAVKK---------------------- 87
N ++G+G G V K G+R D I +K+
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 88 SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-----------LTWEMR 136
N + LLG C L E+ +G L L + P L+ +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
L A +VA + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK 187
Query: 197 KIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
K G ++ E S T SDV+S+GV+L E I S G T ++ A
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMTCAEL 240
Query: 255 FVHSMRKNRLYDIL--DDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELN 310
+ + RL L DD+V +L +C +RP+ ++ + LN
Sbjct: 241 YEKLPQGYRLEKPLNCDDEVY------------DLMRQCWREKPYERPSFAQILVSLN 286
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 56 NHFNVNRILGQGGQGTVYKG-MREDGRIIAV-------------------------KKSK 89
N F R+LG+GG G V +R G++ A K +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 90 NAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMR-LRIATEVAGAL 147
V L ET+ L LV ++ G L H++ + FP E R + A E+ L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP---EARAVFYAAEICCGL 299
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 207
LH I +RD+K NILLD+ +++D G + + QT + ++ GT GY+ P
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAP 354
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
E ++ + T D ++ G +L E++ G+ P
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 56 NHFNVNRILGQGGQGTVYKG-MREDGRIIAV-------------------------KKSK 89
N F R+LG+GG G V +R G++ A K +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 90 NAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMR-LRIATEVAGAL 147
V L ET+ L LV ++ G L H++ + FP E R + A E+ L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP---EARAVFYAAEICCGL 299
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 207
LH I +RD+K NILLD+ +++D G + + QT + ++ GT GY+ P
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAP 354
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
E ++ + T D ++ G +L E++ G+ P
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
T+ P+ ++ EF++ G+L L D Q P + + ++A +A++
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL----IDFSAQIAEGMAFIEQRN---Y 132
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRD+++ NIL+ K+ADFG ++ I ++ + + PE T K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 219 SDVYSFGVVLVELLT-GKKPIFSAGNT 244
SDV+SFG++L+E++T G+ P N
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSKNA----------------------VKLLGCCLET 101
LG G G V+ G + +AVK K V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 102 EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHR 161
E ++ E+++ G+L L ++ + + + ++A +AY+ HR
Sbjct: 81 EPIYIITEYMAKGSLLDFLK---SDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHR 134
Query: 162 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
D+++ N+L+ E K+ADFG ++ I ++ + + PE T KSDV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 222 YSFGVVLVELLT-GKKPIFSAGNTSQENVSLAAYFVHSMR--KNRLYDIL 268
+SFG++L E++T GK P N Y + + + LYDI+
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIM 244
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++L G GTVYKG+ ++ ++A
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 33/230 (14%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR----LQNQEFPLTWEMRL-------- 137
N V LLG C L++ E+ G L L + + ++ P E
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 138 -RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
+ +VA +A+L AS HRD+ + NILL K+ DFG ++ I D +V
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 197 -KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
+ ++ PE + T +SDV+S+G+ L EL FS G++ + +
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-------FSLGSSPYPGMPV---- 253
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ Y ++ + L ++ ++ + C D + KRPT +++
Sbjct: 254 -----DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
LV++ + G L+ +L +++ L+ + I + A+++LH+ + I HRD+K
Sbjct: 176 FLVFDLMRKGELFDYLTEKVA-----LSEKETRSIMRSLLEAVSFLHA---NNIVHRDLK 227
Query: 165 STNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ------LTDK 218
NILLD+ + +++DFG S ++ ++ GT GYL PE + S +
Sbjct: 228 PENILLDDNMQIRLSDFGFS--CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 219 SDVYSFGVVLVELLTGKKPIF 239
D+++ GV+L LL G P +
Sbjct: 286 VDLWACGVILFTLLAGSPPFW 306
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 33/230 (14%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR----LQNQEFPLTWEMRL-------- 137
N V LLG C L++ E+ G L L + + ++ P E
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 138 -RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
+ +VA +A+L AS HRD+ + NILL K+ DFG ++ I D +V
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 197 -KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
+ ++ PE + T +SDV+S+G+ L EL FS G++ + + + F
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-------FSLGSSPYPGMPVDSKF 273
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
Y ++ + L ++ ++ + C D + KRPT +++
Sbjct: 274 ---------YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-----------------------------EDGRIIAVK 86
F ++L G GTVYKG+ ++ ++A
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 87 KSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQN--QEFPLTWEMRLRIATEVA 144
+ + +LLG CL + V L+ + + G L ++ + N ++ L W ++A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 201
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 87/221 (39%), Gaps = 59/221 (26%)
Query: 63 ILGQGGQGTVYKGMRE-DGRIIAVKKSKNAVKLLGCCLETEVPLLV-------------- 107
+LGQG G V K D R A+KK ++ + L L +EV LL
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVXLLASLNHQYVVRYYAAW 71
Query: 108 ----------------------YEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAG 145
E+ N TLY +H NQ+ W R+ ++
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHVT--- 195
AL+Y+HS I HR++K NI +DE K+ DFG +K + +D ++
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 196 ---TKIQGTFGYLDPEY-HQSSQLTDKSDVYSFGVVLVELL 232
T GT Y+ E + +K D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 33/230 (14%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR----LQNQEFPLTWEMRL-------- 137
N V LLG C L++ E+ G L L + + ++ P E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 138 -RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
+ +VA +A+L AS HRD+ + NILL K+ DFG ++ I D +V
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 197 -KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
+ ++ PE + T +SDV+S+G+ L EL FS G++ + +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-------FSLGSSPYPGMPV---- 276
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ Y ++ + L ++ ++ + C D + KRPT +++
Sbjct: 277 -----DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 33/230 (14%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR----LQNQEFPLTWEMRL-------- 137
N V LLG C L++ E+ G L L + + ++ P E
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 138 -RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
+ +VA +A+L AS HRD+ + NILL K+ DFG ++ I D +V
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 197 -KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
+ ++ PE + T +SDV+S+G+ L EL FS G++ + +
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-------FSLGSSPYPGMPV---- 271
Query: 256 VHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ Y ++ + L ++ ++ + C D + KRPT +++
Sbjct: 272 -----DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 105 LLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
+V E++S G L+ ++ H R++ E R+ ++ A+ Y H + HRD
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEME-------ARRLFQQILSAVDYCHRHM---VVHRD 136
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL--TDKSD 220
+K N+LLD AK+ADFG S M G+ Y PE S +L + D
Sbjct: 137 LKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRDSCGSPNYAAPEV-ISGRLYAGPEVD 193
Query: 221 VYSFGVVLVELLTGKKP 237
++S GV+L LL G P
Sbjct: 194 IWSCGVILYALLCGTLP 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 101 TEVPL-LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
T+ P+ ++ EF++ G+L L D Q P + + ++A +A++
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL----IDFSAQIAEGMAFIEQRN---Y 305
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRD+++ NIL+ K+ADFG ++ I ++ + + PE T K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 219 SDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+SFG++L+E++T G+ P N
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 58 FNVNRILGQGGQGTVY-KGMREDGRIIAVKKSKNAVKLLGCCLETEVPLL---------- 106
F +LG G V+ R G++ A+K K + LE E+ +L
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 107 -------------VYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
V + +S G L+ + +R E + + +V A+ YLH
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-----LVIQQVLSAVKYLHEN 125
Query: 154 ASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 210
I HRD+K N+L +E + + DFG SK M+Q + + GT GY+ PE
Sbjct: 126 G---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPEVL 179
Query: 211 QSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
+ D +S GV+ LL G P +
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHL----------------HDRLQNQE--FP 130
+N V LLG C + L++E+ G L +L RL+ +E
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT+E L A +VA + +L + HRD+ + N+L+ K+ DFG ++ I D
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 191 QTHVT-TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+V + ++ PE T KSDV+S+G++L E IFS G +
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE-------IFSLGVNPYPGI 278
Query: 250 SLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVS 306
+ A F ++ DQ ++ I + + C + +KRP+ ++
Sbjct: 279 PVDANFYKLIQNG----FKMDQPFYATEEIYI-----IMQSCWAFDSRKRPSFPNLT 326
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 52/284 (18%)
Query: 63 ILGQGGQGTVYKGMRED-GRIIAVKK-------------------------SKNAVKLLG 96
++G+G G V K +D GRI+A+KK +N V LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
C + + LV+EF+ + L D L+ L +++ + ++ + + HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRDIK NIL+ + K+ DFG ++ +A ++ T Y PE
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKY 202
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENV--------SLAAYFVHSMRKN----- 262
K+ DV++ G ++ E+ G +P+F G++ + + +L KN
Sbjct: 203 GKAVDVWAIGCLVTEMFMG-EPLFP-GDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 263 -RLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
RL +I + + ++ +LA++CL ++ KRP E+
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N + L G + + +++ E++ NG+L L R + F + + + + + Y
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVI--QLVGMLRGIGSGMKY 146
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDP 207
L ++ HRD+ + NIL++ KV+DFG S+ + D T G + P
Sbjct: 147 LSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
E + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 77 REDGR----IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDR---LQNQEF 129
RE+ R ++A K N V+ E +V ++ G L++ ++ + L ++
Sbjct: 67 REESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 189
L W ++ AL ++H I HRDIKS NI L + ++ DFG ++ +
Sbjct: 127 ILDW------FVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN- 176
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
+ GT YL PE ++ +KSD+++ G VL EL T K F AG+
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH-AFEAGS 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + I D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 106 LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRI-ATEVAGALAYLHSAASSPIYHRDI 163
V E+ + G L+ HL +R+ +++ R R E+ AL YLHS + + +RD+
Sbjct: 87 FVMEYANGGELFFHLSRERVFSED-------RARFYGAEIVSALDYLHSEKN--VVYRDL 137
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N++LD+ K+ DFG K D GT YL PE + + D +
Sbjct: 138 KLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 196
Query: 224 FGVVLVELLTGKKPIFS 240
GVV+ E++ G+ P ++
Sbjct: 197 LGVVMYEMMCGRLPFYN 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 81 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + F +
Sbjct: 136 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQ 246
PE ++ + SD + FGV L E+ T G++P N SQ
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 232
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 106 LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRI-ATEVAGALAYLHSAASSPIYHRDI 163
V E+ + G L+ HL +R+ +++ R R E+ AL YLHS + + +RD+
Sbjct: 86 FVMEYANGGELFFHLSRERVFSED-------RARFYGAEIVSALDYLHSEKN--VVYRDL 136
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N++LD+ K+ DFG K D GT YL PE + + D +
Sbjct: 137 KLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 224 FGVVLVELLTGKKPIFS 240
GVV+ E++ G+ P ++
Sbjct: 196 LGVVMYEMMCGRLPFYN 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI--AMDQTHVTTKIQ 199
++ L Y+HSA + HRD+K +N+L++ K+ DFG ++ D T T+
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 267
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVM---KLGKKNQIMAFANLAERCLDLNGKKRPT 301
SQE+++ ++ +N L + + KL K+ A +L +R L N KR T
Sbjct: 268 SQEDLNC---IINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRIT 323
Query: 302 MEE 304
+EE
Sbjct: 324 VEE 326
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 106 LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRI-ATEVAGALAYLHSAASSPIYHRDI 163
V E+ + G L+ HL +R+ +++ R R E+ AL YLHS + + +RD+
Sbjct: 85 FVMEYANGGELFFHLSRERVFSED-------RARFYGAEIVSALDYLHSEKN--VVYRDL 135
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYS 223
K N++LD+ K+ DFG K D GT YL PE + + D +
Sbjct: 136 KLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 194
Query: 224 FGVVLVELLTGKKPIFS 240
GVV+ E++ G+ P ++
Sbjct: 195 LGVVMYEMMCGRLPFYN 211
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 142
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 143 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 193
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 249
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 250 IGGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 141
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 142 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 192
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 248
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 249 IGGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRIATEVAGALAYLHSAASSPIYHRD 162
LV++ + G L+ +L +++ E E R +R EV AL L+ I HRD
Sbjct: 87 FLVFDLMKKGELFDYLTEKVTLSEK----ETRKIMRALLEVICALHKLN------IVHRD 136
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS--- 219
+K NILLD+ K+ DFG S +D ++ GT YL PE + S +
Sbjct: 137 LKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 194
Query: 220 ---DVYSFGVVLVELLTGKKPIF 239
D++S GV++ LL G P +
Sbjct: 195 KEVDMWSTGVIMYTLLAGSPPFW 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 75 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI--QGTFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + + F +
Sbjct: 130 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQ 246
PE ++ + SD + FGV L E+ T G++P N SQ
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 71 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + F +
Sbjct: 126 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQ 246
PE ++ + SD + FGV L E+ T G++P N SQ
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 81 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + F +
Sbjct: 136 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQ 246
PE ++ + SD + FGV L E+ T G++P N SQ
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 232
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 142
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 143 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 193
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 249
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 250 IGGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 71 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + F +
Sbjct: 126 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQ 246
PE ++ + SD + FGV L E+ T G++P N SQ
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 44 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 103
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 161
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 162 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 212
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 213 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 268
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 269 IRGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 129
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 130 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 180
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 181 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 236
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 237 IRGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 50/228 (21%)
Query: 43 CKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR----------------ED--GR--- 81
++F EL K ++LG G GTV+KG+ ED GR
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 82 ------IIAVKKSKNA--VKLLGCCLETEVPLLVYEFISNGTLYQHL--HDRLQNQEFPL 131
++A+ +A V+LLG C + + LV +++ G+L H+ H + L
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL 136
Query: 132 TWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ 191
W ++A + YL + HR++ + N+LL + +VADFG + + D
Sbjct: 137 NW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 192 THVT-TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ ++ + ++ E + T +SDV+S+GV + EL+T G +P
Sbjct: 188 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N + L G + + +++ E++ NG+L L R + F + + + + + Y
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVI--QLVGMLRGIGSGMKY 131
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDP 207
L + HRD+ + NIL++ KV+DFG S+ + D T G + P
Sbjct: 132 LSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
E + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 128
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 129 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 179
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 180 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 235
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 236 IRGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 141
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 142 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 192
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 248
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 249 IGGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 71 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + F +
Sbjct: 126 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGNTSQ 246
PE ++ + SD + FGV L E+ T G++P N SQ
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 89 KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
+N ++L G L + + V E G+L DRL+ + R A +VA +
Sbjct: 75 RNLIRLYGVVLTPPMKM-VTELAPLGSLL----DRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLD 206
YL S HRD+ + N+LL R K+ DFG + + + H + F +
Sbjct: 130 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
PE ++ + SD + FGV L E+ T G++P
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 142
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 143 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 193
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 249
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 250 IGGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 50/228 (21%)
Query: 43 CKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR----------------ED--GR--- 81
++F EL K ++LG G GTV+KG+ ED GR
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 82 ------IIAVKKSKNA--VKLLGCCLETEVPLLVYEFISNGTLYQHL--HDRLQNQEFPL 131
++A+ +A V+LLG C + + LV +++ G+L H+ H + L
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL 118
Query: 132 TWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ 191
W ++A + YL + HR++ + N+LL + +VADFG + + D
Sbjct: 119 NW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 192 THVT-TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 237
+ ++ + ++ E + T +SDV+S+GV + EL+T G +P
Sbjct: 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N + L G + + +++ E++ NG+L L R + F + + + + + Y
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVI--QLVGMLRGIGSGMKY 125
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDP 207
L + HRD+ + NIL++ KV+DFG S+ + D T G + P
Sbjct: 126 LSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
E + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 129
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 130 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 180
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 181 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 236
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 237 IRGQVFF---------------------RQRVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ KVADFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 142
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 143 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 193
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 194 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 249
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 250 IGGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 156
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 157 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 207
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 208 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 263
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 264 IRGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 31 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 90
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 148
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 149 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 199
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 255
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 256 IRGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 141
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 142 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 192
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 248
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 249 IGGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 112/298 (37%), Gaps = 69/298 (23%)
Query: 56 NHFNVNRILGQGGQGTVYK------GMREDGRIIAVKK---------------------- 87
N ++G+G G V K G+R D I +K+
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 88 SKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-----------LTWEMR 136
N + LLG C L E+ +G L L + P L+ +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 196
L A +VA + YL + HR++ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK 194
Query: 197 KIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
K G ++ E S T SDV+S+GV+L E I S G T ++ A
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMTCAEL 247
Query: 255 FVHSMRKNRLYDIL--DDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELN 310
+ + RL L DD+V +L +C +RP+ ++ + LN
Sbjct: 248 YEKLPQGYRLEKPLNCDDEVY------------DLMRQCWREKPYERPSFAQILVSLN 293
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRIATEVAGALAYLHSAASSPIYHRD 162
LV++ + G L+ +L +++ E E R +R EV AL L+ I HRD
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEK----ETRKIMRALLEVICALHKLN------IVHRD 149
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS--- 219
+K NILLD+ K+ DFG S +D ++ GT YL PE + S +
Sbjct: 150 LKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 220 ---DVYSFGVVLVELLTGKKPIF 239
D++S GV++ LL G P +
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 141
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 142 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 192
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 193 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 248
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 249 IRGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 77/300 (25%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 156
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 157 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 207
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 208 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP----------- 256
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVM---KLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
F H +I+ QV ++ + Q +L CL L RPT EE+
Sbjct: 257 ------FEHDE------EIIRGQVFFRQRVSSECQ-----HLIRWCLALRPSDRPTFEEI 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 128
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 129 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 179
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 180 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 235
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 236 IRGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 71/297 (23%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE- 100
KL KE + + + V +LG GG G+VY G+R D +A+K K+ + G
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 101 TEVPLLVYEF--ISNG----------------------------TLYQHLHDRLQNQEFP 130
T VP+ V +S+G L+ + +R QE
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-- 129
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAM 189
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+
Sbjct: 130 ---ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---AL 180
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 181 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEI 236
Query: 249 VSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ +F ++ +L CL L RPT EE+
Sbjct: 237 IRGQVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 38 SVIDRC-KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLG 96
SV+ RC K+ + +E A N ++ + Q + + RI + K N V+L
Sbjct: 18 SVVRRCMKIPTGQEY--AAKIINTKKLSARDHQK-----LEREARICRLLKHPNIVRLHD 70
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
E LV++ ++ G L++ + R E + ++ ++ + H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCHLNG-- 123
Query: 157 PIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRD+K N+LL + + K+ADFG + + DQ GT GYL PE +
Sbjct: 124 -IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKD 181
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIF 239
D+++ GV+L LL G P +
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 38 SVIDRC-KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLG 96
SV+ RC K+ + +E A N ++ + Q + + RI + K N V+L
Sbjct: 18 SVVRRCMKIPTGQEY--AAKIINTKKLSARDHQK-----LEREARICRLLKHPNIVRLHD 70
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
E LV++ ++ G L++ + R E + ++ ++ + H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNHCHLNG-- 123
Query: 157 PIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRD+K N+LL + + K+ADFG + + DQ GT GYL PE +
Sbjct: 124 -IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKD 181
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIF 239
D+++ GV+L LL G P +
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 38 SVIDRC-KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLG 96
SV+ RC K+ + +E A N ++ + Q + + RI + K N V+L
Sbjct: 36 SVVRRCVKVLAGQEY--AAKIINTKKLSARDHQK-----LEREARICRLLKHPNIVRLHD 88
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
E L+++ ++ G L++ + R E + ++ A+ + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQMG-- 141
Query: 157 PIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
+ HRD+K N+LL + + K+ADFG + + +Q GT GYL PE +
Sbjct: 142 -VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKD 199
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIF 239
D+++ GV+L LL G P +
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFW 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 50/277 (18%)
Query: 58 FNVNRILGQGGQGT-VYKGMREDGRIIAVKK--------SKNAVKLLGCCLETEVPLLV- 107
F +LG G +GT VY+GM D R +AVK+ + V+LL E P ++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLR--ESDEHPNVIR 82
Query: 108 ---------YEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+++I+ L + ++ ++F + + + LA+LHS I
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---I 139
Query: 159 YHRDIKSTNILLD-----ERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 211
HRD+K NIL+ + +A ++DFG K +A+ + + + + GT G++ PE
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 212 S---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDIL 268
T D++S G V +++ F Q N+ L A + + + D++
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI 259
Query: 269 DDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ L E+ + ++ +KRP+ + V
Sbjct: 260 ARE---------------LIEKMIAMDPQKRPSAKHV 281
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + I D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 293
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 249
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 250 SQEDLNCGINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 291
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 267
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 268 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 309
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 293
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 247
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDLNGK 297
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 248 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 293
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 267
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 268 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 309
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 293
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + I D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 110/285 (38%), Gaps = 67/285 (23%)
Query: 58 FNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETE---VPLLVYEFISNG 114
+ + +LG+GG GTV+ G R R+ K ++LG ++ PL V G
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 115 TLYQH-----LHDRLQNQEF-------PLTWEMRLRIATE---------------VAGAL 147
H L D + QE PL + TE V A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 148 AYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
+ HS + HRDIK NIL+D R AK+ DFG+ + D+ + T GT Y
Sbjct: 153 QHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY--TDFDGTRVYSP 206
Query: 207 PEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNR 263
PE+ HQ L + V+S G++L +++ G P QE + +F + +
Sbjct: 207 PEWISRHQYHAL--PATVWSLGILLYDMVCGDIPF----ERDQEILEAELHFPAHVSPD- 259
Query: 264 LYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSME 308
L RCL RP++EE+ ++
Sbjct: 260 --------------------CCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 137 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 252
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 253 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 294
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 138 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 253
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 254 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 295
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 129 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 244
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 245 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 286
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 293
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 245
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 246 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 287
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 140 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 255
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 256 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 297
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 247
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 248 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 289
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 249
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 250 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 291
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRIATEVAGALAYLHSAASSPIYHRD 162
LV++ + G L+ +L +++ E E R +R EV AL L+ I HRD
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEK----ETRKIMRALLEVICALHKLN------IVHRD 149
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS--- 219
+K NILLD+ K+ DFG S +D + GT YL PE + S +
Sbjct: 150 LKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 220 ---DVYSFGVVLVELLTGKKPIF 239
D++S GV++ LL G P +
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + I D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 247
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDLNGK 297
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 248 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 247
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDLNGK 297
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 248 SQEDLNXIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA 241
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPG 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 249
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 250 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 291
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYMPGGDMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ KVADFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + I D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV + +S G L+ DR+ + F T + + +V A+ YLH I HRD+K
Sbjct: 97 LVMQLVSGGELF----DRIVEKGF-YTEKDASTLIRQVLDAVYYLHRMG---IVHRDLKP 148
Query: 166 TNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+L DE + ++DFG SK + V + GT GY+ PE + D +
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYVAPEVLAQKPYSKAVDCW 206
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQ-ENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKN 279
S GV+ LL G P + ++ E + A Y S + + D D + L +K+
Sbjct: 207 SIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 264
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N + L G +++ ++V E++ NG+L L + + +F + +++ + G A
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTV-----IQLVGMLRGISAG 136
Query: 150 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDP 207
+ + HRD+ + NIL++ KV+DFG S+ + D T G + P
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 208 EYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
E + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYMPGGDMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ KVADFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLT 132
++ + + RI + K N V+L E LV++ ++ G L++ + R E +
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 133 WEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAM 189
++ ++ ++H I HRD+K N+LL + + K+ADFG + +
Sbjct: 134 -----HCIHQILESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 190 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
+Q GT GYL PE + D+++ GV+L LL G P +
Sbjct: 186 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFW 234
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 247
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDLNGK 297
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 248 SQEDLNXIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+L+D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 89 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 140
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 199 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 233
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 89 ILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 140
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 199 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 233
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV+E + G++ H+H R E + + +VA AL +LH+ I HRD+K
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHNKG---IAHRDLKP 139
Query: 166 TNILLDERYR---AKVADFGTSKFIAM--DQTHVTTK----IQGTFGYLDPE----YHQS 212
NIL + + K+ DF I + D + ++T G+ Y+ PE + +
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 213 SQLTDK-SDVYSFGVVLVELLTGKKP 237
+ + DK D++S GV+L LL+G P
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 191 QTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 304
Query: 250 SLAAYFVHSMRKN 262
+ F +++
Sbjct: 305 KIDEEFCRRLKEG 317
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 120 LHDRLQNQEFPL-TWEMRLRIATEVAGALA 148
L + +N+ P T R R + GA+
Sbjct: 123 LRSK-RNEFVPYKTKGARFRQGKDYVGAIP 151
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 191 QTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 297
Query: 250 SLAAYFVHSMRKN 262
+ F +++
Sbjct: 298 KIDEEFCRRLKEG 310
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 56 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 115
Query: 120 LHDRLQNQEFPL-TWEMRLRIATEVAGALA 148
L + +N+ P T R R + GA+
Sbjct: 116 LRSK-RNEFVPYKTKGARFRQGKDYVGAIP 144
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 191 QTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 299
Query: 250 SLAAYFVHSMRKN 262
+ F +++
Sbjct: 300 KIDEEFCRRLKEG 312
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 58 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 117
Query: 120 LHDRLQNQEFPL-TWEMRLRIATEVAGALA 148
L + +N+ P T R R + GA+
Sbjct: 118 LRSK-RNEFVPYKTKGARFRQGKDYVGAIP 146
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 139 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 190
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 247 VLIYEMAAGYPPFFA 261
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 105 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 156
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+DE+ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 157 ENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 212
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 213 VLIYEMAAGYPPFFA 227
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 191 QTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 306
Query: 250 SLAAYFVHSMRKN 262
+ F +++
Sbjct: 307 KIDEEFCRRLKEG 319
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 62 RILGQGGQGTVYKGMREDGRI-IAVKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + ++ + + +I I + N V LLG C + PL+V EF G L +
Sbjct: 65 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 124
Query: 120 LHDRLQNQEFPL-TWEMRLRIATEVAGALA 148
L + +N+ P T R R + GA+
Sbjct: 125 LRSK-RNEFVPYKTKGARFRQGKDYVGAIP 153
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVLEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ KVADFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 111 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG--- 156
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 157 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 214
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 215 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 270
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 271 DPRFNDILG 279
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E G L+ + R++ E I +V + YLH I HRD+K
Sbjct: 113 LVMECYKGGELFDEIIHRMKFNEVDAA-----VIIKQVLSGVTYLHK---HNIVHRDLKP 164
Query: 166 TNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+LL+ + + K+ DFG S + +Q + ++ GT Y+ PE + + +K DV+
Sbjct: 165 ENLLLESKEKDALIKIVDFGLSA-VFENQKKMKERL-GTAYYIAPEVLRK-KYDEKCDVW 221
Query: 223 SFGVVLVELLTGKKPIFSAGNTSQE 247
S GV+L LL G P G T QE
Sbjct: 222 SIGVILFILLAGYPPF--GGQTDQE 244
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N +KL ++ +V E + G L+ + R + E RI +V + Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITY 136
Query: 150 LHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
+H I HRD+K NILL+ + + K+ DFG S + T + +I GT Y+
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIA 191
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
PE + + +K DV+S GV+L LL+G P +
Sbjct: 192 PEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 105 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 150
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 208
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 209 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 264
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 265 DPRFNDILG 273
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 104 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 149
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 150 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 207
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 208 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 263
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 264 DPRFNDILG 272
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPL 105
KE + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 106 LVYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEM 135
V +S+G L+ + +R QE E+
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----EL 138
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 194
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 139 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 192
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQV 248
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+F ++ +L CL L RPT EE+
Sbjct: 249 FF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 105 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 150
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 208
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 209 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 264
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 265 DPRFNDILG 273
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 47/227 (20%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVKKSKNAVKLLGCCLET--EVPLLV----YEFISNG-T 115
LG+G G V+K + R G ++AVKK +A + T E+ +L +E I N
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 116 LYQHLHDR-----LQNQEFPLTWEMRLRIATEV---------AGALAYLHSAASSPIYHR 161
+ + +DR E L +R I V + YLHS + HR
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHR 133
Query: 162 DIKSTNILLDERYRAKVADFGTSK-FIAM-------------------DQTHVTTKIQGT 201
D+K +NILL+ KVADFG S+ F+ + D + T T
Sbjct: 134 DMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT 193
Query: 202 FGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
Y PE S++ T D++S G +L E+L G KPIF +T +
Sbjct: 194 RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQ 239
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E ++ G L+ L ++ LT E ++ + YLHS I H D+K
Sbjct: 90 ILIGELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLK 141
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L +R R K+ DFG + +D + I GT ++ PE L ++D
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G+T QE NVS Y
Sbjct: 200 MWSIGVITYILLSGASPFL--GDTKQETLANVSAVNY 234
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 101 TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ P LV+E ++N LYQ L D +++R + E+ AL Y HS
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD----------YDIRFYMY-EILKALDYCHSMG--- 151
Query: 158 IYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
I HRD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMY 209
Query: 217 DKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKL 275
D S D++S G +L ++ K+P F + + V +A + LYD +D ++L
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIEL 265
Query: 276 GKK-NQIMA 283
+ N I+
Sbjct: 266 DPRFNDILG 274
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 115/261 (44%), Gaps = 34/261 (13%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLH 121
+ L +G + + R + + A + N V LLG + + +++ + S+G L++ L
Sbjct: 45 KTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 104
Query: 122 DRLQNQEFPLTWEMR-----------LRIATEVAGALAYLHSAASSPIYHRDIKSTNILL 170
R + + T + R + + ++A + YL +S + H+D+ + N+L+
Sbjct: 105 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLV 161
Query: 171 DERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLV 229
++ K++D G + + A D + ++ PE + + SD++S+GVVL
Sbjct: 162 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 221
Query: 230 ELLT-GKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLA 288
E+ + G +P G ++Q+ V M +NR QV+ +A +
Sbjct: 222 EVFSYGLQPY--CGYSNQDVV--------EMIRNR-------QVLPCPDDCPAWVYALMI 264
Query: 289 ERCLDLNGKKRPTMEEVSMEL 309
E C + +RP +++ L
Sbjct: 265 E-CWNEFPSRRPRFKDIHSRL 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 189
P+T E + + +VA + +L +S HRD+ + NILL E K+ DFG ++ I
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 190 DQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQEN 248
+ +V + ++ PE + KSDV+S+GV+L E IFS G +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWE-------IFSLGGSPYPG 304
Query: 249 VSLAAYFVHSMRKN-----------RLYDILDDQVMKLGKKNQIMAFANLAERCLDL 294
V + F +R+ +Y I+ D + K+ FA L E+ DL
Sbjct: 305 VQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERP--RFAELVEKLGDL 359
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 62 RILGQGGQGTVYKGMREDGRIIA-VKKSKNAVKLLGCCLETEVPLLV-YEFISNGTLYQH 119
++L +G + YK + + +I+ + N V LLG C + PL+V E+ G L +
Sbjct: 63 KMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNY 122
Query: 120 LHDR 123
L +
Sbjct: 123 LKSK 126
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 106 LVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
LV ++ G TL DRL +E + + IA + L Y+H RD
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLP-EEMARFYLAEMVIAIDSVHQLHYVH---------RD 200
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-----SQLTD 217
IK NIL+D ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 218 KSDVYSFGVVLVELLTGKKPIFS 240
+ D +S GV + E+L G+ P ++
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYA 283
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPL 105
KE + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 106 LVYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEM 135
V +S+G L+ + +R QE E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----EL 115
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 194
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 116 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 169
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQV 225
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+F ++ +L CL L RPT EE+
Sbjct: 226 FF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 115/261 (44%), Gaps = 34/261 (13%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLH 121
+ L +G + + R + + A + N V LLG + + +++ + S+G L++ L
Sbjct: 62 KTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 121
Query: 122 DRLQNQEFPLTWEMR-----------LRIATEVAGALAYLHSAASSPIYHRDIKSTNILL 170
R + + T + R + + ++A + YL +S + H+D+ + N+L+
Sbjct: 122 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLV 178
Query: 171 DERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLV 229
++ K++D G + + A D + ++ PE + + SD++S+GVVL
Sbjct: 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 238
Query: 230 ELLT-GKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLA 288
E+ + G +P G ++Q+ V M +NR QV+ +A +
Sbjct: 239 EVFSYGLQPY--CGYSNQDVV--------EMIRNR-------QVLPCPDDCPAWVYALMI 281
Query: 289 ERCLDLNGKKRPTMEEVSMEL 309
E C + +RP +++ L
Sbjct: 282 E-CWNEFPSRRPRFKDIHSRL 301
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPL 105
KE + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 106 LVYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEM 135
V +S+G L+ + +R QE E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----EL 116
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 194
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 117 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 170
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQV 226
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+F ++ +L CL L RPT EE+
Sbjct: 227 FF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 45/225 (20%)
Query: 52 DKATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVKKSKNAVKLLGCCLETEVPLL---- 106
+K + + ++ ++G+G G V K R + +A+K KN L + EV LL
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMN 108
Query: 107 -------------------------VYEFISNGTLYQHLHDRLQNQEF-PLTWEMRLRIA 140
V+E +S +L+D L+N F ++ + + A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-----YNLYDLLRNTNFRGVSLNLTRKFA 163
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILL--DERYRAKVADFGTSKFIAMDQTHVTTKI 198
++ AL +L + S I H D+K NILL +R K+ DFG+S + + I
Sbjct: 164 QQMCTALLFLATPELS-IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG---QRIYQXI 219
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
Q F Y PE D++S G +LVE+ TG +P+FS N
Sbjct: 220 QSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGAN 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPL 105
KE + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 106 LVYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEM 135
V +S+G L+ + +R QE E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----EL 116
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 194
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 117 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 170
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQV 226
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+F ++ +L CL L RPT EE+
Sbjct: 227 FF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 71/292 (24%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPL 105
KE + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 106 LVYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEM 135
V +S+G L+ + +R QE E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQE-----EL 115
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 194
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 116 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 169
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQV 225
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+F ++ +L CL L RPT EE+
Sbjct: 226 FF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 117/292 (40%), Gaps = 71/292 (24%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPL 105
KE + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 106 LVYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEM 135
V +S+G L+ + +R QE E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----EL 116
Query: 136 RLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 194
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 117 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 170
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAA 253
T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQV 226
Query: 254 YFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+F ++ + Q +L CL L RPT EE+
Sbjct: 227 FFRQ----------------RVSSECQ-----HLIRWCLALRPSDRPTFEEI 257
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N +KL ++ +V E + G L+ + R + E RI +V + Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITY 136
Query: 150 LHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
+H I HRD+K NILL+ + + K+ DFG S + T + +I GT Y+
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIA 191
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
PE + + +K DV+S GV+L LL+G P +
Sbjct: 192 PEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 106 LVYEFISNGTLYQHL---------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+V E+++ G ++ HL H R + LT+E YLHS
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE--------------YLHSLD-- 182
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ +RD+K N+L+D++ +V DFG +K + T + GT YL PE S
Sbjct: 183 -LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
D ++ GV++ E+ G P F+
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAY 149
N +KL ++ +V E + G L+ + R + E RI +V + Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITY 136
Query: 150 LHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
+H I HRD+K NILL+ + + K+ DFG S + T + +I GT Y+
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIA 191
Query: 207 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
PE + + +K DV+S GV+L LL+G P +
Sbjct: 192 PEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H +
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 293
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 35/173 (20%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 199
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H +
Sbjct: 137 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 200 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSA--------------GNT 244
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 252
Query: 245 SQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMA---FANLAERCLDL 294
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 253 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 294
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 45/225 (20%)
Query: 52 DKATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVKKSKNAVKLLGCCLETEVPLL---- 106
+K + + ++ ++G+G G V K R + +A+K KN L + EV LL
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMN 108
Query: 107 -------------------------VYEFISNGTLYQHLHDRLQNQEF-PLTWEMRLRIA 140
V+E +S +L+D L+N F ++ + + A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-----YNLYDLLRNTNFRGVSLNLTRKFA 163
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILL--DERYRAKVADFGTSKFIAMDQTHVTTKI 198
++ AL +L + S I H D+K NILL +R K+ DFG+S + + I
Sbjct: 164 QQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXI 219
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
Q F Y PE D++S G +LVE+ TG +P+FS N
Sbjct: 220 QSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGAN 262
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 37/161 (22%)
Query: 158 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE---YHQSSQ 214
I HRDIK +NILLD K+ DFG S + + T+ G Y+ PE S Q
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 215 LTD-KSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVM 273
D +SDV+S G+ L EL TG+ P + N ++D L QV+
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPY--------------------PKWNSVFDQL-TQVV 243
Query: 274 KLGKKNQI---------MAFANLAERCLDLNGKKRPTMEEV 305
K G Q+ +F N CL + KRP +E+
Sbjct: 244 K-GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 106 LVYEFISNGTLYQHL---------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+V E+++ G ++ HL H R + LT+E YLHS
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFE--------------YLHSLD-- 161
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ +RD+K N+L+D++ +V DFG +K + T + GT YL PE S
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
D ++ GV++ E+ G P F+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPL 131
Y+G + +I+A S+ V L ET+ L LV ++ G + H+++ +++ P
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN--VDEDNPG 285
Query: 132 TWEMRLRIAT-EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
E R T ++ L +LH I +RD+K N+LLD+ +++D G + +
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 191 QTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
QT T GT G++ PE + D ++ GV L E++ + P F A EN
Sbjct: 343 QTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP-FRARGEKVENKE 400
Query: 251 L 251
L
Sbjct: 401 L 401
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPL 131
Y+G + +I+A S+ V L ET+ L LV ++ G + H+++ +++ P
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN--VDEDNPG 285
Query: 132 TWEMRLRIAT-EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
E R T ++ L +LH I +RD+K N+LLD+ +++D G + +
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 191 QTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
QT T GT G++ PE + D ++ GV L E++ + P F A EN
Sbjct: 343 QTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP-FRARGEKVENKE 400
Query: 251 L 251
L
Sbjct: 401 L 401
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 113 MVMEYVAGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 164
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 220
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 221 VLIYEMAAGYPPFFA 235
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 52 DKATNHFNVNRILGQGGQGTVY----KGMREDGRIIAVKKS------------------K 89
D ++ F V LG+G VY KG ++ + +KK+
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHP 108
Query: 90 NAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
N +KL ET + LV E ++ G L+ + ++ E ++ A+A
Sbjct: 109 NIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGYYSE-----RDAADAVKQILEAVA 162
Query: 149 YLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
YLH I HRD+K N+L K+ADFG SK + + + + GT GY
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYC 217
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
PE + + D++S G++ LL G +P +
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 84/198 (42%), Gaps = 44/198 (22%)
Query: 64 LGQGGQGTVYK-GMREDGRIIAVKKS-------KNAVKLLG------------CCLETEV 103
LG G G V+K +EDGR+ AVK+S K+ + L CC+ E
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE- 123
Query: 104 PLLVYEFISNGTLYQHLHDRLQN---QEFPLTWEMRLRIATEVAG-------ALAYLHSA 153
+ G LY L L Q+ W L A +V G ALA+LHS
Sbjct: 124 ----QAWEEGGILY--LQTELCGPSLQQHCEAWGASLPEA-QVWGYLRDTLLALAHLHSQ 176
Query: 154 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
+ H D+K NI L R R K+ DFG + + +G Y+ PE Q S
Sbjct: 177 G---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGS 231
Query: 214 QLTDKSDVYSFGVVLVEL 231
T +DV+S G+ ++E+
Sbjct: 232 YGT-AADVFSLGLTILEV 248
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPL 131
Y+G + +I+A S+ V L ET+ L LV ++ G + H+++ +++ P
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN--VDEDNPG 285
Query: 132 TWEMRLRIAT-EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
E R T ++ L +LH I +RD+K N+LLD+ +++D G + +
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 191 QTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
QT T GT G++ PE + D ++ GV L E++ + P F A EN
Sbjct: 343 QTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP-FRARGEKVENKE 400
Query: 251 L 251
L
Sbjct: 401 L 401
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 45/225 (20%)
Query: 52 DKATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVKKSKNAVKLLGCCLETEVPLL---- 106
+K + + ++ ++G+G G V K R + +A+K KN L + EV LL
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMN 89
Query: 107 -------------------------VYEFISNGTLYQHLHDRLQNQEF-PLTWEMRLRIA 140
V+E +S +L+D L+N F ++ + + A
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-----YNLYDLLRNTNFRGVSLNLTRKFA 144
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILL--DERYRAKVADFGTSKFIAMDQTHVTTKI 198
++ AL +L + S I H D+K NILL +R K+ DFG+S + + I
Sbjct: 145 QQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ---RIYQXI 200
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
Q F Y PE D++S G +LVE+ TG +P+FS N
Sbjct: 201 QSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGAN 243
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 73 YKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPL 131
Y+G + +I+A S+ V L ET+ L LV ++ G + H+++ +++ P
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN--VDEDNPG 285
Query: 132 TWEMRLRIAT-EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
E R T ++ L +LH I +RD+K N+LLD+ +++D G + +
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342
Query: 191 QTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
QT T GT G++ PE + D ++ GV L E++ + P F A EN
Sbjct: 343 QTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP-FRARGEKVENKE 400
Query: 251 L 251
L
Sbjct: 401 L 401
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 120
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 121 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 178
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 179 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 227
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 261
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 118
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 176
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 177 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 225
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 259
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 191
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 191
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 48/214 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 112
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 113 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 170
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 171 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 219
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFS 240
+L T DV+S G VL ELL G +PIF
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 252
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 139 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 190
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 247 VLIYEMAAGYPPFFA 261
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 122
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 123 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 180
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 181 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 229
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 263
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 97
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 98 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 155
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 156 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 204
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
LV E ++ G L++ + + E ++ MR ++ A++++H + HRD+K
Sbjct: 82 FLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAVSHMHDVG---VVHRDLK 133
Query: 165 STNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L ++ K+ DFG ++ D + T T Y PE + + D+
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNGYDESCDL 192
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV+L +L+G+ P S
Sbjct: 193 WSLGVILYTMLSGQVPFQS 211
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 30/144 (20%)
Query: 106 LVYEFISNGTLYQHL---------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+V E++ G ++ HL H R + LT+E YLHS
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE--------------YLHSLD-- 162
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ +RD+K N+L+D++ +V DFG +K + T + GT YL PE S
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYN 217
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
D ++ GV++ E+ G P F+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 48/214 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 89
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 90 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 147
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 148 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 196
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFS 240
+L T DV+S G VL ELL G +PIF
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 105 LLVYEFISNGTLYQHL--HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
+V E++S G L+ ++ + RL +E R+ ++ + Y H + HRD
Sbjct: 92 FMVMEYVSGGELFDYICKNGRLDEKE-------SRRLFQQILSGVDYCHRHM---VVHRD 141
Query: 163 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT--DKSD 220
+K N+LLD AK+ADFG S M G+ Y PE S +L + D
Sbjct: 142 LKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRXSCGSPNYAAPEV-ISGRLYAGPEVD 198
Query: 221 VYSFGVVLVELLTGKKP 237
++S GV+L LL G P
Sbjct: 199 IWSSGVILYALLCGTLP 215
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 163
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 164 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 221
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 222 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 270
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 304
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 48/215 (22%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
I HRDIK N+LLD K+ DFG++K + + +V+ Y+ Y+++
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYYRAP 191
Query: 214 QL-------TDKSDVYSFGVVLVELLTGKKPIFSA 241
+L T DV+S G VL ELL G +PIF
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 101 TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYH 160
+ P LV+E ++N T ++ L L + +++R + E+ AL Y HS I H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLRQTLTD------YDIRFYMY-EILKALDYCHSMG---IMH 154
Query: 161 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 220 -DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKK 278
D++S G +L ++ K+P F + + V +A + LYD +D ++L +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEDLYDYIDKYNIELDPR 268
Query: 279 -NQIMA 283
N I+
Sbjct: 269 FNDILG 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 111 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 162
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 219 VLIYEMAAGYPPFFA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 111 MVMEYVPGGEMFSHLR-RIGRFXEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 162
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 219 VLIYEMAAGYPPFFA 233
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 38 SVIDRC-KLFSSKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNAVKLLG 96
SV+ RC K+ + +E A N ++ + Q + + RI + K N V+L
Sbjct: 25 SVVRRCVKVLAGQEY--AAMIINTKKLSARDHQK-----LEREARICRLLKHPNIVRLHD 77
Query: 97 CCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
E L+++ ++ G L++ + R E + ++ A+ + H
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQMG-- 130
Query: 157 PIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 213
+ HR++K N+LL + + K+ADFG + + +Q GT GYL PE +
Sbjct: 131 -VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKD 188
Query: 214 QLTDKSDVYSFGVVLVELLTGKKPIF 239
D+++ GV+L LL G P +
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFW 214
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 104 MVMEYVPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 155
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 156 ENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGYNKAVDWWALG 211
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 212 VLIYEMAAGYPPFFA 226
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 188
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 246
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 247 WSLGVIMYILLCGYPPFYS 265
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 158
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 216
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 217 WSLGVIMYILLCGYPPFYS 235
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 194
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 252
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 253 WSLGVIMYILLCGYPPFYS 271
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 202
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 203 WSLGVIMYILLCGYPPFYS 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 142
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 200
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 201 WSLGVIMYILLCGYPPFYS 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 18/192 (9%)
Query: 69 QGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQE 128
+GT ++++ I+ + + +N + L E ++++EFIS ++ +R+
Sbjct: 41 KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF----ERINTSA 96
Query: 129 FPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRA--KVADFGTSKF 186
F L + +V AL +LHS I H DI+ NI+ R + K+ +FG ++
Sbjct: 97 FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR- 152
Query: 187 IAMDQTHVTTKIQGTFG---YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
Q + F Y PE HQ ++ +D++S G ++ LL+G P + N
Sbjct: 153 ----QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN 208
Query: 244 TS-QENVSLAAY 254
EN+ A Y
Sbjct: 209 QQIIENIMNAEY 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 90 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 143
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 201
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 202 WSLGVIMYILLCGYPPFYS 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 97 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 150
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 208
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 209 WSLGVIMYILLCGYPPFYS 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 96 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 149
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 207
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 208 WSLGVIMYILLCGYPPFYS 226
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-----SQ 214
HRDIK N+LLD ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFS 240
+ D +S GV + E+L G+ P ++
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 95 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 148
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 206
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 207 WSLGVIMYILLCGYPPFYS 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ ++ G P F+
Sbjct: 226 VLIYQMAAGYPPFFA 240
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-----SQ 214
HRDIK N+LLD ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFS 240
+ D +S GV + E+L G+ P ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ KV DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 202
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 203 WSLGVIMYILLCGYPPFYS 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDE---RYRAKVADFGTSKFIAMDQTHVTTKI 198
++ ALAY HS + H+D+K NIL + K+ DFG ++ D+ +T
Sbjct: 132 QMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNA 186
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
GT Y+ PE + +T K D++S GVV+ LLTG P G + +E A Y
Sbjct: 187 AGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF--TGTSLEEVQQKATY 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ KV DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 131 LTWEMRLRIATEVAGALAYLHS-------AASSPIYHRDIKSTNILLDERYRAKVADFGT 183
++W IA +A LAYLH I HRDIKS N+LL A +ADFG
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 184 S-KFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-----DVYSFGVVLVELLT 233
+ KF A T GT Y+ PE + + + D+Y+ G+VL EL +
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ KV DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 119 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 170
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ KV DFG +K + T + GT YL PE S D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 227 VLIYEMAAGYPPFFA 241
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 114/291 (39%), Gaps = 71/291 (24%)
Query: 50 ELDKATNHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPLL 106
E + + + V +LG GG G+VY G+R D +A+K K+ + G T VP+
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 107 VYEF--ISNG----------------------------TLYQHLHDRLQNQEFPLTWEMR 136
V +S+G L+ + +R QE E+
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELA 115
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVT 195
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 116 RSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVY 169
Query: 196 TKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
T GT Y PE+ + + +S V+S G++L +++ G P +E + +
Sbjct: 170 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVF 225
Query: 255 FVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
F ++ +L CL L RPT EE+
Sbjct: 226 F---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ KV DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 106 LVYEFISNGTLYQHL---------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+V E+ G ++ HL H R + LT+E YLHS
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE--------------YLHSLD-- 162
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ +RD+K N+++D++ KV DFG +K + T + GT YL PE S
Sbjct: 163 -LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
D ++ GV++ E+ G P F+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 23/175 (13%)
Query: 85 VKKSKNAVKLLGCCLE--TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRI 139
++ N +KL+ + ++ P LV+E+I+N LYQ L D +++R +
Sbjct: 94 LRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD----------FDIRFYM 143
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 198
E+ AL Y HS I HRD+K N+++D ++ + ++ D+G ++F Q + ++
Sbjct: 144 -YELLKALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRV 198
Query: 199 QGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
+ + PE Q+ D S D++S G +L ++ ++P F + + V +A
Sbjct: 199 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 252
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 113 NG----TLYQHL--------------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G +Y +L H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 197
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 71/285 (24%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPLLVYEF-- 110
+ + V +LG GG G+VY G+R D +A+K K+ + G T VP+ V
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 111 ISNG----------------------------TLYQHLHDRLQNQEFPLTWEMRLRIATE 142
+S+G L+ + +R QE E+ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELARSFFWQ 118
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T GT
Sbjct: 119 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGT 172
Query: 202 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
Y PE+ + + +S V+S G++L +++ G P +E + +F
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIGGQVFF----- 223
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ +L CL L RPT EE+
Sbjct: 224 ----------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 106 LVYEFISNGTLYQHL---------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+V E+ G ++ HL H R + LT+E YLHS
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE--------------YLHSLD-- 161
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ +RD+K N+++D++ KV DFG +K + T + GT YL PE S
Sbjct: 162 -LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 217 DKSDVYSFGVVLVELLTGKKPIFS 240
D ++ GV++ E+ G P F+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 23/170 (13%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNG---TLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
N +KL+ + ++ P LV+E+I+N LYQ L D F + + M E+
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD------FDIRFYM-----YELL 142
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 203
AL Y HS I HRD+K N+++D ++ + ++ D+G ++F Q + ++ +
Sbjct: 143 KALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY- 197
Query: 204 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
+ PE Q+ D S D++S G +L ++ ++P F + + V +A
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 247
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 36/208 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 96
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIHSFG 154
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 155 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 209
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFS 240
+ T DV+S G VL ELL G +PIF
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLG-QPIFP 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 118
Query: 113 NG-----------------TLYQ-HLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G T+Y+ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 176
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V + I + Y PE +
Sbjct: 177 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRY-YRAPELIFGA 231
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 259
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 96
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 154
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 155 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 209
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 237
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L ++ LT + + ++ + YLHS I H D+K
Sbjct: 105 VLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLHSKR---IAHFDLK 156
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L ++ R K+ DFG + I + + I GT ++ PE L ++D
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 214
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G T QE N+S Y
Sbjct: 215 MWSIGVITYILLSGASPFL--GETKQETLTNISAVNY 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 92
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 93 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 150
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 151 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 205
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 103
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 104 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 161
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 162 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 216
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 71/285 (24%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPLLVYEF-- 110
+ + V +LG GG G+VY G+R D +A+K K+ + G T VP+ V
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 111 ISNG----------------------------TLYQHLHDRLQNQEFPLTWEMRLRIATE 142
+S+G L+ + +R QE E+ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELARSFFWQ 118
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T GT
Sbjct: 119 VLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGT 172
Query: 202 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
Y PE+ + + +S V+S G++L +++ G P +E + +F
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFF----- 223
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ +L CL L RPT EE+
Sbjct: 224 ----------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 71/285 (24%)
Query: 56 NHFNVNRILGQGGQGTVYKGMR-EDGRIIAVKK-SKNAVKLLGCCLE-TEVPLLVYEF-- 110
+ + V +LG GG G+VY G+R D +A+K K+ + G T VP+ V
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 111 ISNG----------------------------TLYQHLHDRLQNQEFPLTWEMRLRIATE 142
+S+G L+ + +R QE E+ +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELARSFFWQ 118
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T GT
Sbjct: 119 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGT 172
Query: 202 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMR 260
Y PE+ + + +S V+S G++L +++ G P +E + +F
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFF----- 223
Query: 261 KNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
++ +L CL L RPT EE+
Sbjct: 224 ----------------RQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 85
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 86 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 143
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 144 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 198
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K N+LLD+ K+ADFG S I D + T
Sbjct: 112 RFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTS 167
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 237
G+ Y PE + DV+S G+VL +L G+ P
Sbjct: 168 C-GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--- 193
L I ++A A+ +LHS + HRD+K +NI KV DFG AMDQ
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQ 221
Query: 194 -VTTKIQ---------GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 232
V T + GT Y+ PE + + K D++S G++L ELL
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 197
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 197
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L ++ LT + + ++ + YLHS I H D+K
Sbjct: 84 VLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLHSKR---IAHFDLK 135
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L ++ R K+ DFG + I + + I GT ++ PE L ++D
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 193
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G T QE N+S Y
Sbjct: 194 MWSIGVITYILLSGASPFL--GETKQETLTNISAVNY 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 42/207 (20%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSK-------------------------NAVKLLGCC 98
+G+G G VYK GRI+A+K+ + N V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 99 LETEVPLLVYEFISNGTLYQHLHDR---LQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
LV+EF+ L + L + LQ+ + + LR +A+ H
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLR-------GVAHCHQHR- 139
Query: 156 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
I HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S+
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 216 TDKS-DVYSFGVVLVELLTGKKPIFSA 241
S D++S G + E++TG KP+F
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLFPG 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L ++ LT + + ++ + YLHS I H D+K
Sbjct: 91 VLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLHSKR---IAHFDLK 142
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 220
NI+L ++ R K+ DFG + ++ + I GT ++ PE L ++D
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
++S GV+ LL+G P G T QE N+S Y
Sbjct: 201 MWSIGVITYILLSGASPFL--GETKQETLTNISAVNY 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 42/207 (20%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSK-------------------------NAVKLLGCC 98
+G+G G VYK GRI+A+K+ + N V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 99 LETEVPLLVYEFISNGTLYQHLHDR---LQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
LV+EF+ L + L + LQ+ + + LR +A+ H
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLR-------GVAHCHQHR- 139
Query: 156 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
I HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S+
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 216 TDKS-DVYSFGVVLVELLTGKKPIFSA 241
S D++S G + E++TG KP+F
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLFPG 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKKS------KN-----AVKLLGCCL--------- 99
+++G G G VY+ + + G ++A+KK KN KL C +
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 88
Query: 100 ----ETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+ EV L LV +++ H Q P+ + ++L + ++ +LAY+HS
Sbjct: 89 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 146
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 147 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 201
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 61 NRILGQGGQGTVYKG-MREDGRIIAVKK-------SKNAVKLLGCCLETEVPLLVYEFIS 112
+++G G G VY+ + + G ++A+KK ++++ + L Y F S
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 113 NGT----LYQHL--------------HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
+G +Y +L H Q P+ + ++L + ++ +LAY+HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMY-QLFRSLAYIHSFG 142
Query: 155 SSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY-HQS 212
I HRDIK N+LLD K+ DFG++K + + +V+ I + Y PE +
Sbjct: 143 ---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPELIFGA 197
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T DV+S G VL ELL G +PIF
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLG-QPIFPG 225
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 101 TEVPL-LVYEFISNGTLYQHL-HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
T+ P+ ++ EF++ G+L L D Q P + + ++A +A++
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL----IDFSAQIAEGMAFIEQRN---Y 299
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK 218
HRD+++ NIL+ K+ADFG ++ A T FG T K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFG----------SFTIK 349
Query: 219 SDVYSFGVVLVELLT-GKKPIFSAGN 243
SDV+SFG++L+E++T G+ P N
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--- 193
L I ++A A+ +LHS + HRD+K +NI KV DFG AMDQ
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQ 175
Query: 194 -VTTKIQ---------GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 232
V T + GT Y+ PE + + K D++S G++L ELL
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT YL P S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 73/295 (24%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKK---SKNAVKLLGCCLETEV---PLLVYEFISNGT 115
+ILG G GTV GR +AVK+ + L+ L TE P ++ + S T
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 80
Query: 116 ---LY-------QHLHD------------RLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
LY +L D +LQ + P++ + ++A +A+LHS
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIASGVAHLHSL 134
Query: 154 ASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTTKIQ- 199
I HRD+K NIL+ E R ++DFG K + Q+ T +
Sbjct: 135 K---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 200 --GTFGYLDPEYHQSS-------QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
GT G+ PE + S +LT D++S G V +L+ K F + + N+
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 251 LAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ + D++ L ++ I +L + +D + KRPT +V
Sbjct: 252 RGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDR-GDQAF--TEREASEIMKSIGEAIQYLHSIN---IAHRDVK 142
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K + T+ T Y+ PE + D+
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV++ LL G P +S
Sbjct: 201 WSLGVIMYILLCGYPPFYS 219
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV+E + G++ H+ + E + R+ +VA AL +LH+ I HRD+K
Sbjct: 88 LVFEKLQGGSILAHIQKQKHFNEREAS-----RVVRDVAAALDFLHTKG---IAHRDLKP 139
Query: 166 TNILLDERYRA---KVADF--GTSKFIAMDQTHVTTK----IQGTFGYLDPEY-----HQ 211
NIL + + K+ DF G+ + T +TT G+ Y+ PE Q
Sbjct: 140 ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQ 199
Query: 212 SSQLTDKSDVYSFGVVLVELLTGKKPI 238
++ + D++S GVVL +L+G P
Sbjct: 200 ATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ-------------------NQEFP 130
+ +KL G C + LL+ E+ G+L L + + E
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK----- 185
LT + A +++ + YL A + HRD+ + NIL+ E + K++DFG S+
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 186 --FIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
++ Q + K D Y T +SDV+SFGV+L E++T
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIY------TTQSDVWSFGVLLWEIVT 247
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
++ YLH + HRD+K N+ L+E K+ DFG + + D T + GT
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGT 180
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
Y+ PE + + DV+S G ++ LL GK P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 141 TEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 200
++ AL ++HS + HRDIK N+ + K+ D G +F + +T + G
Sbjct: 143 VQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVG 198
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
T Y+ PE + KSD++S G +L E+ + P +
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 208
YLH + HRD+K N+ L+E K+ DFG + + D T + GT Y+ PE
Sbjct: 136 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 191
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
+ + DV+S G ++ LL GK P
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L+V E + G L+ + DR +Q F T I + A+ YLHS I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDR-GDQAF--TEREASEIXKSIGEAIQYLHSIN---IAHRDVK 188
Query: 165 STNILL-DERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L +R A K+ DFG +K +TT + Y+ PE + D
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDX 246
Query: 222 YSFGVVLVELLTGKKPIFS 240
+S GV+ LL G P +S
Sbjct: 247 WSLGVIXYILLCGYPPFYS 265
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYAPGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+++D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
++ YLH + HRD+K N+ L+E K+ DFG + + D T + GT
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGT 180
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
Y+ PE + + DV+S G ++ LL GK P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L+ + R + E RI +V + Y+H + I HRD+K
Sbjct: 109 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK---NKIVHRDLKP 160
Query: 166 TNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+LL+ + + ++ DFG S + + KI GT Y+ PE + +K DV+
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAYYIAPEVLHGT-YDEKCDVW 217
Query: 223 SFGVVLVELLTGKKPIFSAGN 243
S GV+L LL+G P F+ N
Sbjct: 218 STGVILYILLSGCPP-FNGAN 237
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 36/224 (16%)
Query: 96 GCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
G C+ + +LV EF+ G+L +L + + W +L +A ++A A+ +L
Sbjct: 79 GVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILW--KLEVAKQLAAAMHFLEENT- 133
Query: 156 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI------QGTFGYLDPEY 209
+ H ++ + NILL R + G FI + ++ + Q ++ PE
Sbjct: 134 --LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 210 HQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDIL 268
++ + L +D +SFG L E+ +G SA + S RK + Y+
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSA--------------LDSQRKLQFYE-- 232
Query: 269 DDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGI 312
D + K ++ ANL C+D RP+ + +LN +
Sbjct: 233 DRHQLPAPKAAEL---ANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L+ + R + E RI +V + Y+H + I HRD+K
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK---NKIVHRDLKP 154
Query: 166 TNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+LL+ + + ++ DFG S + + KI GT Y+ PE + +K DV+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAYYIAPEVLHGT-YDEKCDVW 211
Query: 223 SFGVVLVELLTGKKPIFSAGN 243
S GV+L LL+G P F+ N
Sbjct: 212 STGVILYILLSGCPP-FNGAN 231
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L+ + R + E RI +V + Y+H + I HRD+K
Sbjct: 127 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK---NKIVHRDLKP 178
Query: 166 TNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+LL+ + + ++ DFG S + + KI GT Y+ PE + +K DV+
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAYYIAPEVLHGT-YDEKCDVW 235
Query: 223 SFGVVLVELLTGKKPIFSAGN 243
S GV+L LL+G P F+ N
Sbjct: 236 STGVILYILLSGCPP-FNGAN 255
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS--------- 227
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
L DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 228 --------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 179
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS--------- 226
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
L DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 227 --------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 270
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L+ + R + E RI +V + Y+H + I HRD+K
Sbjct: 126 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK---NKIVHRDLKP 177
Query: 166 TNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+LL+ + + ++ DFG S + + KI GT Y+ PE + +K DV+
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAYYIAPEVLHGT-YDEKCDVW 234
Query: 223 SFGVVLVELLTGKKPIFSAGN 243
S GV+L LL+G P F+ N
Sbjct: 235 STGVILYILLSGCPP-FNGAN 254
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS--------- 227
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
L DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 228 --------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 186
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS--------- 233
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
L DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 234 --------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS--------- 227
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
L DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 228 --------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 47/283 (16%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQ-GTVYKGMREDG--RIIAVKKSKNAVKLLGCCL- 99
K+F +++L + R+ Q G+ G +RE R + + N V+L C
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85
Query: 100 -----ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
ET++ L+ + T Y D++ P E + ++ L +LHS
Sbjct: 86 SRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPT--ETIKDMMFQLLRGLDFLHSHR 140
Query: 155 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
+ HRD+K NIL+ + K+ADFG ++ + T + T Y PE S
Sbjct: 141 ---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSS 195
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE------------------NVSLAAYFV 256
D++S G + E+ +KP+F + + +V+L
Sbjct: 196 YATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254
Query: 257 HSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKR 299
HS + + D + +LGK +L +CL N KR
Sbjct: 255 HSKSAQPIEKFVTD-IDELGK--------DLLLKCLTFNPAKR 288
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 47/283 (16%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQ-GTVYKGMREDG--RIIAVKKSKNAVKLLGCCL- 99
K+F +++L + R+ Q G+ G +RE R + + N V+L C
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85
Query: 100 -----ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
ET++ L+ + T Y D++ P E + ++ L +LHS
Sbjct: 86 SRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPT--ETIKDMMFQLLRGLDFLHSHR 140
Query: 155 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
+ HRD+K NIL+ + K+ADFG ++ + T + T Y PE S
Sbjct: 141 ---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSS 195
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE------------------NVSLAAYFV 256
D++S G + E+ +KP+F + + +V+L
Sbjct: 196 YATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254
Query: 257 HSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKR 299
HS + + D + +LGK +L +CL N KR
Sbjct: 255 HSKSAQPIEKFVTD-IDELGK--------DLLLKCLTFNPAKR 288
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 69/291 (23%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKK---SKNAVKLLGCCLETEV---PLLVYEFISNGT 115
+ILG G GTV GR +AVK+ + L+ L TE P ++ + S T
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 98
Query: 116 ---LY-------QHLHD------------RLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
LY +L D +LQ + P++ + ++A +A+LHS
Sbjct: 99 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIASGVAHLHSL 152
Query: 154 ASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTTKIQ- 199
I HRD+K NIL+ E R ++DFG K + Q +
Sbjct: 153 K---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 200 --GTFGYLDPEYHQSS---QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
GT G+ PE + S +LT D++S G V +L+ K F + + N+ +
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 269
Query: 255 FVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ D++ L ++ I +L + +D + KRPT +V
Sbjct: 270 SL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+++ G ++ HL R+ P R A ++ YLHS + +RD+K
Sbjct: 118 MVMEYVAGGEMFSHLR-RIGRFSEP---HARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 166 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFG 225
N+L+D++ +V DFG +K + T + GT L PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALG 225
Query: 226 VVLVELLTGKKPIFS 240
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L++ E + G L+ + +R +Q F T I ++ A+ +LHS I HRD+K
Sbjct: 102 LIIMECMEGGELFSRIQER-GDQAF--TEREAAEIMRDIGTAIQFLHSHN---IAHRDVK 155
Query: 165 STNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L + + K+ DFG +K Q + T + Y+ PE + D+
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 212
Query: 222 YSFGVVLVELLTGKKPIFSAGNTSQ 246
+S GV++ LL G P +S NT Q
Sbjct: 213 WSLGVIMYILLCGFPPFYS--NTGQ 235
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 69/291 (23%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKK---SKNAVKLLGCCLETEV---PLLVYEFISNGT 115
+ILG G GTV GR +AVK+ + L+ L TE P ++ + S T
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 98
Query: 116 ---LY-------QHLHD------------RLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
LY +L D +LQ + P++ + ++A +A+LHS
Sbjct: 99 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIASGVAHLHSL 152
Query: 154 ASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTTKIQ- 199
I HRD+K NIL+ E R ++DFG K + Q +
Sbjct: 153 K---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 200 --GTFGYLDPEYHQSS---QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
GT G+ PE + S +LT D++S G V +L+ K F + + N+ +
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 269
Query: 255 FVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ D++ L ++ I +L + +D + KRPT +V
Sbjct: 270 SL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVT 195
I +V YLH I HRD+K N+LL+ + R K+ DFG S V
Sbjct: 126 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EVG 177
Query: 196 TKIQ---GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
K++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 178 GKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQE 229
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 319
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VSL
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVSLK------- 368
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 369 ----------DQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 410
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 79/209 (37%), Gaps = 49/209 (23%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKK------------------------SKNAVKLLGCCL 99
LG G G VYK ++ ++A K N VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
++ EF + G + + E PLT + + AL YLH + I
Sbjct: 105 YENNLWILIEFCAGGAV----DAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLDPEYHQSS 213
HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 214 QLTD-----KSDVYSFGVVLVELLTGKKP 237
D K+DV+S G+ L+E+ + P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 79/209 (37%), Gaps = 49/209 (23%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKK------------------------SKNAVKLLGCCL 99
LG G G VYK ++ ++A K N VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
++ EF + G + + E PLT + + AL YLH + I
Sbjct: 105 YENNLWILIEFCAGGAV----DAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLDPEYHQSS 213
HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 214 QLTD-----KSDVYSFGVVLVELLTGKKP 237
D K+DV+S G+ L+E+ + P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 79/209 (37%), Gaps = 49/209 (23%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKK------------------------SKNAVKLLGCCL 99
LG G G VYK ++ ++A K N VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 100 ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
++ EF + G + + E PLT + + AL YLH + I
Sbjct: 105 YENNLWILIEFCAGGAV----DAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLDPEYHQSS 213
HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 214 QLTD-----KSDVYSFGVVLVELLTGKKP 237
D K+DV+S G+ L+E+ + P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
L++ E + G L+ + +R +Q F T I ++ A+ +LHS I HRD+K
Sbjct: 83 LIIMECMEGGELFSRIQER-GDQAF--TEREAAEIMRDIGTAIQFLHSHN---IAHRDVK 136
Query: 165 STNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
N+L + + K+ DFG +K Q + T + Y+ PE + D+
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 193
Query: 222 YSFGVVLVELLTGKKPIFSAGNTSQ 246
+S GV++ LL G P +S NT Q
Sbjct: 194 WSLGVIMYILLCGFPPFYS--NTGQ 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 202
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 305
Query: 203 GYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSM 259
YL PE S + D +S GV+L L+G P FS T VSL
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVSLK------- 354
Query: 260 RKNRLYDILDDQVMKLGKKNQIM-AFANLAERCLDL-------NGKKRPTMEE 304
DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 355 ----------DQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 396
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 44 KLFSSKELDKATNHFNVNRILGQGGQ-GTVYKGMREDG--RIIAVKKSKNAVKLLGCCL- 99
K+F +++L + R+ Q G+ G +RE R + + N V+L C
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85
Query: 100 -----ETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAA 154
ET++ LV+E + L +L D++ P E + ++ L +LHS
Sbjct: 86 SRTDRETKL-TLVFEHVDQD-LTTYL-DKVPEPGVPT--ETIKDMMFQLLRGLDFLHSHR 140
Query: 155 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 214
+ HRD+K NIL+ + K+ADFG ++ + T + T Y PE S
Sbjct: 141 ---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSS 195
Query: 215 LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE------------------NVSLAAYFV 256
D++S G + E+ +KP+F + + +V+L
Sbjct: 196 YATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254
Query: 257 HSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKR 299
HS + + D + +LGK +L +CL N KR
Sbjct: 255 HSKSAQPIEKFVTD-IDELGK--------DLLLKCLTFNPAKR 288
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVT 195
I +V YLH I HRD+K N+LL+ + R K+ DFG S V
Sbjct: 109 IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EVG 160
Query: 196 TKIQ---GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQE 247
K++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 161 GKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQE 212
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK-------------------------KSKNAVKLLGC 97
+G+G GTV+K RE I+A+K K KN V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ LV+EF Q L + L E+ ++ L + HS
Sbjct: 70 LHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--- 121
Query: 158 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTD 217
+ HRD+K N+L++ K+ADFG ++ + + ++ T Y P+ ++L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 218 KS-DVYSFGVVLVELLTGKKPIFSAGNTSQE 247
S D++S G + EL +P+F + +
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
+ YLH+ + HRD+K N+ L++ K+ DFG + I D T + GT Y+
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYI 209
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
PE + + D++S G +L LL GK P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ-------------------NQEFP 130
+ +KL G C + LL+ E+ G+L L + + E
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT + A +++ + YL A + HRD+ + NIL+ E + K++DFG S+ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 191 QTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
+ V + QG ++ E T +SDV+SFGV+L E++T
Sbjct: 204 DSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 90 NAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQ-------------------NQEFP 130
+ +KL G C + LL+ E+ G+L L + + E
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 131 LTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 190
LT + A +++ + YL A + HRD+ + NIL+ E + K++DFG S+ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 191 QTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT 233
+ V + QG ++ E T +SDV+SFGV+L E++T
Sbjct: 204 DSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 36/224 (16%)
Query: 96 GCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
G C + +LV EF+ G+L +L + + W +L +A ++A A+ +L
Sbjct: 79 GVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILW--KLEVAKQLAWAMHFLEENT- 133
Query: 156 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI------QGTFGYLDPEY 209
+ H ++ + NILL R + G FI + ++ + Q ++ PE
Sbjct: 134 --LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 210 HQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDIL 268
++ + L +D +SFG L E+ +G SA + S RK + Y+
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSA--------------LDSQRKLQFYE-- 232
Query: 269 DDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEVSMELNGI 312
D + K ++ ANL C+D RP+ + +LN +
Sbjct: 233 DRHQLPAPKAAEL---ANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTH 193
+R+ ++ + YLH + I H D+K NILL Y K+ DFG S+ I H
Sbjct: 134 IRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG----H 186
Query: 194 VTT--KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
+I GT YL PE +T +D+++ G++ LLT P N
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 117 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 172
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 237
G+ Y PE + DV+S GV+L +L + P
Sbjct: 173 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 116 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 171
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 237
G+ Y PE + DV+S GV+L +L + P
Sbjct: 172 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 107 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 162
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 237
G+ Y PE + DV+S GV+L +L + P
Sbjct: 163 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 111 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 166
Query: 198 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 237
G+ Y PE + DV+S GV+L +L + P
Sbjct: 167 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 204
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX-ICSRY-Y 207
Query: 205 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
PE ++ T D++S G V+ EL+ G +P+F
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFPG 244
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIYH 160
L+ + +G+LY D LQ Q L + LR+A A LA+LH + I H
Sbjct: 83 LITHYHEHGSLY----DFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV---TTKIQGTFGYLDPEYHQSSQLTD 217
RD KS N+L+ + +AD G + + ++ GT Y+ PE TD
Sbjct: 137 RDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTD 196
Query: 218 ------KSDVYSFGVVLVEL 231
+D+++FG+VL E+
Sbjct: 197 CFESYKWTDIWAFGLVLWEI 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 56 NHFNVNRILGQGGQGTVYKGMRE-DGRIIAVKKSKNAVKLLGCC---------------- 98
+ + + +G G G V R G+ +A+KK NA ++
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 99 --------LETEVPLLVYE--FISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
L VP ++ ++ + LH + + + PLT E ++ L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLK 172
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 205
Y+HSA + HRD+K +N+L++E K+ DFG ++ + + + T+ T Y
Sbjct: 173 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 206 DPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
PE S + T D++S G + E+L ++ +F N
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKN 267
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 147 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MAQDIYRASY 199
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
++ E+ S G LY+ + + + E E R ++G ++Y HS I HRD+K
Sbjct: 93 IIMEYASGGELYERICNAGRFSED----EARFFFQQLLSG-VSYCHSMQ---ICHRDLKL 144
Query: 166 TNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVY 222
N LLD R K+ DFG SK + +T GT Y+ PE + K +DV+
Sbjct: 145 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYDGKIADVW 202
Query: 223 SFGVVLVELLTGKKP 237
S GV L +L G P
Sbjct: 203 SCGVTLYVMLVGAYP 217
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 208
YLH + HRD+K N+ L+E K+ DFG + + D + GT Y+ PE
Sbjct: 154 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 209
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
+ + DV+S G ++ LL GK P
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 208
YLH + HRD+K N+ L+E K+ DFG + + D + GT Y+ PE
Sbjct: 156 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 211
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
+ + DV+S G ++ LL GK P
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS------- 212
HRDIK NILLD ++ADFG+ + D T + GT YL PE Q+
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 213 SQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVH 257
+ D ++ GV E+ G+ P F A +T++ + Y H
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTP-FYADSTAETYGKIVHYKEH 288
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 96 GCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAAS 155
G LE E+ L+ F G+L +L + +TW +A ++ L+YLH
Sbjct: 81 GSNLEVEL-WLITAFHDKGSLTDYLKGNI------ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 156 --------SPIYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHVTTKIQGTFGYLD 206
I HRD KS N+LL A +ADFG + +F T GT Y+
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 207 PEYHQSSQLTDKS-----DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRK 261
PE + + + D+Y+ G+VL EL++ K + G + +
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA--ADGPVDEYMLPFEEEIGQHPSL 251
Query: 262 NRLYDILDDQVMKLGKKNQIMAFANLAERCLDLN 295
L +++ + M+ K+ + LA+ C+ +
Sbjct: 252 EELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIE 285
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
++ YLH + HRD+K N+ L+E K+ DFG + + D + GT
Sbjct: 123 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGT 178
Query: 202 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
Y+ PE + + DV+S G ++ LL GK P
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 147 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 199
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 56 NHFNVNRILGQGGQGTVYKGMRE-DGRIIAVKKSKNAVKLLGCC---------------- 98
+ + + +G G G V R G+ +A+KK NA ++
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 99 --------LETEVPLLVYE--FISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALA 148
L VP ++ ++ + LH + + + PLT E ++ L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLK 173
Query: 149 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 205
Y+HSA + HRD+K +N+L++E K+ DFG ++ + + + T+ T Y
Sbjct: 174 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 206 DPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSAGN 243
PE S + T D++S G + E+L ++ +F N
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKN 268
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 147 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 199
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 153 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 205
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 258
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 173 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 225
Query: 197 KIQG-----TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 278
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 161 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 213
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 161 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 213
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 146 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 198
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 146 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 198
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 138 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 190
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 243
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 163 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 215
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 216 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 268
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIAT 141
I+A N VKLL ++ EF + G + + E PLT +
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV----DAVMLELERPLTESQIQVVCK 115
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
+ AL YLH + I HRD+K+ NIL K+ADFG S GT
Sbjct: 116 QTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 202 FGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKP 237
++ PE D K+DV+S G+ L+E+ + P
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
+ YLH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+
Sbjct: 138 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYI 193
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
PE + + D++S G +L LL GK P
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 54/237 (22%)
Query: 47 SSKELDKATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVKK------------------ 87
S KE+D+ F V R+ GQG GTV G + G +A+KK
Sbjct: 18 SRKEMDR----FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDL 73
Query: 88 ----SKNAVKL------LGCCLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMR 136
N V+L LG ++ L +V E++ + TL++ + + Q P ++
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIK 132
Query: 137 LRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVT 195
+ + ++ ++ LH + + + HRDIK N+L++E K+ DFG++K ++ + +V
Sbjct: 133 VFL-FQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV- 189
Query: 196 TKIQGTFGYLDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSAGNTS 245
Y+ Y+++ +L T D++S G + E++ G +PIF N++
Sbjct: 190 -------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSA 238
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+K NIL+ A + DFG + ++ GT Y PE S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 220 DVYSFGVVLVELLTGKKP 237
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG +A D +
Sbjct: 161 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASY 213
Query: 197 KIQGTFG-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
+G ++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 73/295 (24%)
Query: 62 RILGQGGQGTVYKGMREDGRIIAVKK---SKNAVKLLGCCLETEV---PLLVYEFISNGT 115
+ILG G GTV GR +AVK+ + L+ L TE P ++ + S T
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 80
Query: 116 ---LY-------QHLHD------------RLQNQEFPLTWEMRLRIATEVAGALAYLHSA 153
LY +L D +LQ + P++ + ++A +A+LHS
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIASGVAHLHSL 134
Query: 154 ASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTTKIQ- 199
I HRD+K NIL+ E R ++DFG K + Q +
Sbjct: 135 K---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 200 --GTFGYLDPEYHQSS-------QLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENVS 250
GT G+ PE + S +LT D++S G V +L+ K F + + N+
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 251 LAAYFVHSMRKNRLYDILDDQVMKLGKKNQIMAFANLAERCLDLNGKKRPTMEEV 305
+ + D++ L ++ I +L + +D + KRPT +V
Sbjct: 252 RGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 47/239 (19%)
Query: 34 SYDGSVIDRCKLFSSKEL----DKATNHFNVNRILGQGGQGTVYK--------------- 74
+YD V D K + + + D +H++++ LG G G V++
Sbjct: 25 NYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV 84
Query: 75 ---------GMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHL---HD 122
+R++ + ++V + V L + +++YEF+S G L++ + H+
Sbjct: 85 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 144
Query: 123 RLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERY--RAKVAD 180
++ E + +V L ++H H D+K NI+ + K+ D
Sbjct: 145 KMSEDE-------AVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLID 194
Query: 181 FGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
FG + + Q+ VTT GT + PE + + +D++S GV+ LL+G P
Sbjct: 195 FGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 24/142 (16%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH----SAASSP-IYH 160
L+ ++ NG+LY +L + L + L++A L +LH S P I H
Sbjct: 112 LITDYHENGSLYDYL------KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 161 RDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHV----TTKIQGTFGYLDPEYHQSS-- 213
RD+KS NIL+ + +AD G + KFI+ D V T++ GT Y+ PE S
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFIS-DTNEVDIPPNTRV-GTKRYMPPEVLDESLN 223
Query: 214 ----QLTDKSDVYSFGVVLVEL 231
Q +D+YSFG++L E+
Sbjct: 224 RNHFQSYIMADMYSFGLILWEV 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
+ YLH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYI 209
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
PE + + D++S G +L LL GK P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 158 IYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
I H D+K NILL ++ R+ KV DFG+S + + V T IQ F Y PE ++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 216 TDKSDVYSFGVVLVELLTG 234
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 158 IYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
I H D+K NILL ++ R+ KV DFG+S + + V T IQ F Y PE ++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 216 TDKSDVYSFGVVLVELLTG 234
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
+ YLH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYI 209
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
PE + + D++S G +L LL GK P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ A + T +V T+
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ A + T +V T+
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ A + T +V T+
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 47/239 (19%)
Query: 34 SYDGSVIDRCKLFSSKEL----DKATNHFNVNRILGQGGQGTVYK--------------- 74
+YD V D K + + + D +H++++ LG G G V++
Sbjct: 131 NYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV 190
Query: 75 ---------GMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHL---HD 122
+R++ + ++V + V L + +++YEF+S G L++ + H+
Sbjct: 191 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 250
Query: 123 RLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDER--YRAKVAD 180
++ E + +V L ++H H D+K NI+ + K+ D
Sbjct: 251 KMSEDE-------AVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLID 300
Query: 181 FGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
FG + + Q+ VTT GT + PE + + +D++S GV+ LL+G P
Sbjct: 301 FGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L+ + R + E RI +V + Y H + I HRD+K
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYXHK---NKIVHRDLKP 154
Query: 166 TNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 222
N+LL+ + + ++ DFG S + KI GT Y+ PE + +K DV+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKK-XKDKI-GTAYYIAPEVLHGT-YDEKCDVW 211
Query: 223 SFGVVLVELLTGKKPIFSAGN 243
S GV+L LL+G P F+ N
Sbjct: 212 STGVILYILLSGCPP-FNGAN 231
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG ++ I +
Sbjct: 164 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 197 KIQG-TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 221 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 269
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 159
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 160 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 214
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 261
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L Q+ L+ E ++ + YLH+ I H D+K
Sbjct: 91 VLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK 142
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQSSQLTDKS 219
NI+L ++ K+ DFG + I + V K I GT ++ PE L ++
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
D++S GV+ LL+G P G+T QE N++ +Y
Sbjct: 200 DMWSIGVITYILLSGASPFL--GDTKQETLANITAVSY 235
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 89 KNAVKLLGCCLET----EVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
N ++L+ CL L+ F GTL+ + +RL+++ LT + L + +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI-ERLKDKGNFLTEDQILWLLLGIC 144
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT--SKFIAMDQTHVTTKIQG-- 200
L +H+ + HRD+K TNILL + + + D G+ I ++ + +Q
Sbjct: 145 RGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 201 ----TFGYLDPEYH--QSSQLTD-KSDVYSFGVVLVELLTGKKP---IFSAGNT 244
T Y PE QS + D ++DV+S G VL ++ G+ P +F G++
Sbjct: 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILL----DERYRAKVADFGTSKFI--AMDQTHVT 195
++ + YLH+ + HRD+K NIL+ ER R K+AD G ++ +
Sbjct: 136 QILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 196 TKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAY 254
+ TF Y PE ++ K+ D+++ G + ELLT +PIF + QE++ +
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIF---HCRQEDIKTSNP 248
Query: 255 FVHSMRKNRLYDIL 268
+ H + +R+++++
Sbjct: 249 YHHD-QLDRIFNVM 261
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK-------------------------KSKNAVKLLGC 97
+G+G GTV+K RE I+A+K K KN V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
+ LV+EF Q L + L E+ ++ L + HS
Sbjct: 70 LHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--- 121
Query: 158 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTD 217
+ HRD+K N+L++ K+A+FG ++ + + ++ T Y P+ ++L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 218 KS-DVYSFGVVLVELLTGKKPIFSAGNTSQE 247
S D++S G + EL +P+F + +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 139
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 140 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 194
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 139 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 193
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 139 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 193
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 139
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 140 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 194
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 139 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 193
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 140
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 141 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 195
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 139 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 193
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 139 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 193
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 82 IIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMR--LRI 139
II+ +N V+ +G L++ ++ E ++ G L L + P + M L +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTT 196
A ++A YL HRDI + N LL AK+ DFG ++ I +
Sbjct: 187 ARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 197 KIQG-TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSAGN 243
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 244 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L Q+ L+ E ++ + YLH+ I H D+K
Sbjct: 91 VLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK 142
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQSSQLTDKS 219
NI+L ++ K+ DFG + I + V K I GT ++ PE L ++
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
D++S GV+ LL+G P G+T QE N++ +Y
Sbjct: 200 DMWSIGVITYILLSGASPFL--GDTKQETLANITAVSY 235
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L Q+ L+ E ++ + YLH+ I H D+K
Sbjct: 91 VLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK 142
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQSSQLTDKS 219
NI+L ++ K+ DFG + I + V K I GT ++ PE L ++
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
D++S GV+ LL+G P G+T QE N++ +Y
Sbjct: 200 DMWSIGVITYILLSGASPFL--GDTKQETLANITAVSY 235
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 52/235 (22%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVK-------------------------- 86
AT+ + +G G GTVYK G +A+K
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 87 -----KSKNAVKLLGCCL------ETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-LTWE 134
+ N V+L+ C E +V LV+E + Q L L P L E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVD-----QDLRTYLDKAPPPGLPAE 120
Query: 135 MRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 194
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 175
Query: 195 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
T + T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 228
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 90 NAVKLLGCCLE--TEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGAL 147
N VKLL + ++ P L++E+++N T ++ L+ L + +++R I E+ AL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNN-TDFKVLYPTLTD------YDIRYYI-YELLKAL 138
Query: 148 AYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
Y HS I HRD+K N+++D R ++ D+G ++F + + ++ + +
Sbjct: 139 DYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY-FKG 193
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLA 252
PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L D++ Q+F E + T + + YLHS + HRD+K
Sbjct: 98 LVTELMRGGELL----DKILRQKFFSEREASFVLHT-IGKTVEYLHSQG---VVHRDLKP 149
Query: 166 TNIL-LDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
+NIL +DE ++ DFG +K + + + T T ++ PE + + D+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDI 208
Query: 222 YSFGVVLVELLTGKKPIFSAGNTSQENV 249
+S G++L +L G P + + + E +
Sbjct: 209 WSLGILLYTMLAGYTPFANGPSDTPEEI 236
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 91/236 (38%), Gaps = 57/236 (24%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVK-------------------------- 86
AT+ + +G G GTVYK G +A+K
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 87 --KSKNAVKLLGCCL------ETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-LTWEMRL 137
+ N V+L+ C E +V LV+E + Q L L P L E
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVD-----QDLRTYLDKAPPPGLPAETIK 115
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF----IAMDQTH 193
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +A+D
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV 172
Query: 194 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
V T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 173 V------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 137 LRIATEVAGALAYLH-----SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ 191
LRI +A LA+LH + I HRD+KS NIL+ + + +AD G +A+
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMH 163
Query: 192 THVTTKIQ-------GTFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 231
+ T ++ GT Y+ PE + D + D+++FG+VL E+
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIY 159
LV ++ +G+L+ +L+ + +T E +++A A LA+LH + I
Sbjct: 83 WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 136
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLDPEYHQSS- 213
HRD+KS NIL+ + +AD G + + D T I GT Y+ PE S
Sbjct: 137 HRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 194
Query: 214 -----QLTDKSDVYSFGVVLVEL 231
+ ++D+Y+ G+V E+
Sbjct: 195 NMKHFESFKRADIYAMGLVFWEI 217
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 137 LRIATEVAGALAYLH-----SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ 191
LRI +A LA+LH + I HRD+KS NIL+ + + +AD G +A+
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMH 163
Query: 192 THVTTKIQ-------GTFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 231
+ T ++ GT Y+ PE + D + D+++FG+VL E+
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIY 159
LV ++ +G+L+ +L+ + +T E +++A A LA+LH + I
Sbjct: 80 WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 133
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLDPEYHQSS- 213
HRD+KS NIL+ + +AD G + + D T I GT Y+ PE S
Sbjct: 134 HRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 191
Query: 214 -----QLTDKSDVYSFGVVLVEL 231
+ ++D+Y+ G+V E+
Sbjct: 192 NMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIY 159
LV ++ +G+L+ +L+ + +T E +++A A LA+LH + I
Sbjct: 77 WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLDPEYHQSS- 213
HRD+KS NIL+ + +AD G + + D T I GT Y+ PE S
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 214 -----QLTDKSDVYSFGVVLVEL 231
+ ++D+Y+ G+V E+
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEI 211
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 137 LRIATEVAGALAYLH-----SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ 191
LRI +A LA+LH + I HRD+KS NIL+ + + +AD G +A+
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMH 192
Query: 192 THVTTKIQ-------GTFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 231
+ T ++ GT Y+ PE + D + D+++FG+VL E+
Sbjct: 193 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L Q+ L+ E ++ + YLH+ I H D+K
Sbjct: 91 VLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK 142
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQSSQLTDKS 219
NI+L ++ K+ DFG + I + V K I GT ++ PE L ++
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
D++S GV+ LL+G P G+T QE N++ +Y
Sbjct: 200 DMWSIGVITYILLSGASPFL--GDTKQETLANITSVSY 235
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
LV E + G L D++ Q+F E + T + + YLHS + HRD+K
Sbjct: 98 LVTELMRGGELL----DKILRQKFFSEREASFVLHT-IGKTVEYLHSQG---VVHRDLKP 149
Query: 166 TNIL-LDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
+NIL +DE ++ DFG +K + + + T T ++ PE + + D+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDI 208
Query: 222 YSFGVVLVELLTGKKPIFSAGNTSQENV 249
+S G++L +L G P + + + E +
Sbjct: 209 WSLGILLYTMLAGYTPFANGPSDTPEEI 236
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L Q+ L+ E ++ + YLH+ I H D+K
Sbjct: 91 VLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK 142
Query: 165 STNILLDER----YRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQSSQLTDKS 219
NI+L ++ K+ DFG + I + V K I GT ++ PE L ++
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
D++S GV+ LL+G P G+T QE N++ +Y
Sbjct: 200 DMWSIGVITYILLSGASPFL--GDTKQETLANITSVSY 235
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ S G L++ + + + E E R ++G ++Y H+ + HRD+K
Sbjct: 92 IVMEYASGGELFERICNAGRFSED----EARFFFQQLISG-VSYCHAMQ---VCHRDLKL 143
Query: 166 TNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVY 222
N LLD R K+ DFG SK + +T GT Y+ PE + K +DV+
Sbjct: 144 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVW 201
Query: 223 SFGVVLVELLTGKKP 237
S GV L +L G P
Sbjct: 202 SCGVTLYVMLVGAYP 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 49/232 (21%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVK-------------------------- 86
AT+ + +G G GTVYK G +A+K
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 87 --KSKNAVKLLGCCL------ETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-LTWEMRL 137
+ N V+L+ C E +V LV+E + Q L L P L E
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVD-----QDLRTYLDKAPPPGLPAETIK 115
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV 172
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+ T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 173 V--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 220
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIY 159
LV ++ +G+L+ +L+ + +T E +++A A LA+LH + I
Sbjct: 78 WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 131
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLDPEYHQSS- 213
HRD+KS NIL+ + +AD G + + D T I GT Y+ PE S
Sbjct: 132 HRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 189
Query: 214 -----QLTDKSDVYSFGVVLVEL 231
+ ++D+Y+ G+V E+
Sbjct: 190 NMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIYH 160
LV ++ +G+L+ +L+ + +T E +++A A LA+LH + I H
Sbjct: 104 LVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 157
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLDPEYHQSS-- 213
RD+KS NIL+ + +AD G + + D T I GT Y+ PE S
Sbjct: 158 RDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 215
Query: 214 ----QLTDKSDVYSFGVVLVEL 231
+ ++D+Y+ G+V E+
Sbjct: 216 MKHFESFKRADIYAMGLVFWEI 237
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+L+ E +S G L+ L Q+ L+ E ++ + YLH+ I H D+K
Sbjct: 91 VLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLK 142
Query: 165 STNILLDERY----RAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEYHQSSQLTDKS 219
NI+L ++ K+ DFG + I + V K I GT ++ PE L ++
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQE---NVSLAAY 254
D++S GV+ LL+G P G+T QE N++ +Y
Sbjct: 200 DMWSIGVITYILLSGASPFL--GDTKQETLANITSVSY 235
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 46/265 (17%)
Query: 48 SKELDKATNHFNVNRILGQGGQGTVYKGMREDGRIIAVKKSKNA----VKLLGCCLETEV 103
S L A H +RI G + G R ++ +KK + ++LL +
Sbjct: 74 SDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 130
Query: 104 PLLVYEFISN-GTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
+L+ E L+ + +R QE E+ +V A+ + H+ + HRD
Sbjct: 131 FVLILERPEPVQDLFDFITERGALQE-----ELARSFFWQVLEAVRHCHNCG---VLHRD 182
Query: 163 IKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-D 220
IK NIL+D R K+ DFG+ A+ + V T GT Y PE+ + + +S
Sbjct: 183 IKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYFVHSMRKNRLYDILDDQVMKLGKKNQ 280
V+S G++L +++ G P +E + +F ++
Sbjct: 240 VWSLGILLYDMVCGDIPF----EHDEEIIRGQVFF---------------------RQRV 274
Query: 281 IMAFANLAERCLDLNGKKRPTMEEV 305
+L CL L RPT EE+
Sbjct: 275 SSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH-----SAASSPIYH 160
LV ++ +G+L+ +L+ + +T E +++A A LA+LH + I H
Sbjct: 117 LVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 161 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLDPEYHQSS-- 213
RD+KS NIL+ + +AD G + + D T I GT Y+ PE S
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 228
Query: 214 ----QLTDKSDVYSFGVVLVEL 231
+ ++D+Y+ G+V E+
Sbjct: 229 MKHFESFKRADIYAMGLVFWEI 250
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE ++ +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ S G L++ + + + E E R ++G ++Y H+ + HRD+K
Sbjct: 91 IVMEYASGGELFERICNAGRFSED----EARFFFQQLISG-VSYCHAMQ---VCHRDLKL 142
Query: 166 TNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVY 222
N LLD R K+ DFG SK + +T GT Y+ PE + K +DV+
Sbjct: 143 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVW 200
Query: 223 SFGVVLVELLTGKKP 237
S GV L +L G P
Sbjct: 201 SCGVTLYVMLVGAYP 215
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTF 202
A+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 203 GYLDPEYHQSSQLTDKS-------DVYSFGVVLVELLTGKKPIFSA 241
Y+ ++++ ++ S DV+S G +L EL ++PIF
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPG 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
LAY H + HRD+K N+L++ER K+ADFG ++ ++ ++ T Y
Sbjct: 112 GLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYR 167
Query: 206 DPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
P+ S+ + + D++ G + E+ TG +P+F G+T +E +
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPLF-PGSTVEEQL 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 49/232 (21%)
Query: 54 ATNHFNVNRILGQGGQGTVYKGM-REDGRIIAVK-------------------------- 86
AT+ + +G G GTVYK G +A+K
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 87 --KSKNAVKLLGCCL------ETEVPLLVYEFISNGTLYQHLHDRLQNQEFP-LTWEMRL 137
+ N V+L+ C E +V LV+E + Q L L P L E
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVD-----QDLRTYLDKAPPPGLPAETIK 115
Query: 138 RIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 197
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV 172
Query: 198 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
+ T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 173 V--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 69 QGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL--------LVYEFISNGTLYQHL 120
+G +RE +I+ + K +N V L+ C P LV++F + L
Sbjct: 57 EGFPITALREI-KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-----L 110
Query: 121 HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 180
L N T R+ + L Y+H + I HRD+K+ N+L+ K+AD
Sbjct: 111 AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD 167
Query: 181 FGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKK 236
FG ++ ++ + + T Y PE + D++ G ++ E+ T +
Sbjct: 168 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RS 226
Query: 237 PIFSAGNTSQENVSLAAYFVHSM 259
PI GNT Q ++L + S+
Sbjct: 227 PIMQ-GNTEQHQLALISQLCGSI 248
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 69 QGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL--------LVYEFISNGTLYQHL 120
+G +RE +I+ + K +N V L+ C P LV++F + L
Sbjct: 58 EGFPITALREI-KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-----DL 111
Query: 121 HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 180
L N T R+ + L Y+H + I HRD+K+ N+L+ K+AD
Sbjct: 112 AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD 168
Query: 181 FGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKK 236
FG ++ ++ + + T Y PE + D++ G ++ E+ T +
Sbjct: 169 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RS 227
Query: 237 PIFSAGNTSQENVSLAAYFVHSM 259
PI GNT Q ++L + S+
Sbjct: 228 PIMQ-GNTEQHQLALISQLCGSI 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 69 QGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL--------LVYEFISNGTLYQHL 120
+G +RE +I+ + K +N V L+ C P LV++F + L
Sbjct: 58 EGFPITALREI-KILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHD-----L 111
Query: 121 HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 180
L N T R+ + L Y+H + I HRD+K+ N+L+ K+AD
Sbjct: 112 AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD 168
Query: 181 FGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKK 236
FG ++ ++ + + T Y PE + D++ G ++ E+ T +
Sbjct: 169 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RS 227
Query: 237 PIFSAGNTSQENVSLAAYFVHSM 259
PI GNT Q ++L + S+
Sbjct: 228 PIMQ-GNTEQHQLALISQLCGSI 249
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 36/198 (18%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVKK-------------------------SKNAVKLLGC 97
+G+G G V+K R+ G+I+A+KK N V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 98 CLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSP 157
LV+E+ + L H DR Q + + I + A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVL--HELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNC-- 123
Query: 158 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH-QSSQLT 216
HRD+K NIL+ + K+ DFG ++ + + ++ T Y PE +Q
Sbjct: 124 -IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYG 181
Query: 217 DKSDVYSFGVVLVELLTG 234
DV++ G V ELL+G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ S G L++ + + + E E R ++G ++Y H+ + HRD+K
Sbjct: 92 IVMEYASGGELFERICNAGRFSED----EARFFFQQLISG-VSYAHAMQ---VAHRDLKL 143
Query: 166 TNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQ-GTFGYLDPEYHQSSQLTDK-SDV 221
N LLD R K+ADFG SK + H K GT Y+ PE + K +DV
Sbjct: 144 ENTLLDGSPAPRLKIADFGYSKASVL---HSQPKSAVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 222 YSFGVVLVELLTGKKP 237
+S GV L +L G P
Sbjct: 201 WSCGVTLYVMLVGAYP 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 139 IATEVAGALAYLHSAASSPIYHRDIKSTNILL--DERYRAKVADFGTSK-FIAMDQTH-- 193
I ++ AL YLH+ I HRDIK N L ++ + K+ DFG SK F ++
Sbjct: 173 IMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 194 -VTTKIQGTFGYLDPEYHQSSQLT--DKSDVYSFGVVLVELLTGKKP 237
+TTK GT ++ PE ++ + K D +S GV+L LL G P
Sbjct: 230 GMTTK-AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAAS------SPI 158
LLV E+ NG+L ++L + W R+A V LAYLH+ I
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFI-------AMDQTHVTTKIQGTFGYLDPEYHQ 211
HRD+ S N+L+ ++DFG S + ++ + GT Y+ PE +
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
Query: 212 SS-QLTD------KSDVYSFGVVLVELLTGKKPIFSAGNTSQ 246
+ L D + D+Y+ G++ E+ +F + +
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGY 204
L Y+HSA + HRD+K N+ ++E K+ DFG ++ + T +V T+ Y
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 207
Query: 205 LDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
PE S +++ D++S G ++ E+LTGK
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 158 IYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 215
I H D+K NILL ++ R+ KV DFG+S + + V IQ F Y PE ++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYXXIQSRF-YRAPEVILGARY 276
Query: 216 TDKSDVYSFGVVLVELLTG 234
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTF 202
A+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 203 GYLDPEYHQSSQLTDKS-------DVYSFGVVLVELLTGKKPIFSA 241
++ ++++ ++ S DV+S G +L EL ++PIF
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPG 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 69 QGTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPL--------LVYEFISNGTLYQHL 120
+G +RE +I+ + K +N V L+ C P LV++F + L
Sbjct: 58 EGFPITALREI-KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-----L 111
Query: 121 HDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 180
L N T R+ + L Y+H + I HRD+K+ N+L+ K+AD
Sbjct: 112 AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD 168
Query: 181 FGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKK 236
FG ++ ++ + + T Y PE + D++ G ++ E+ T +
Sbjct: 169 FGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RS 227
Query: 237 PIFSAGNTSQENVSLAAYFVHSM 259
PI GNT Q ++L + S+
Sbjct: 228 PIMQ-GNTEQHQLALISQLCGSI 249
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 96/248 (38%), Gaps = 55/248 (22%)
Query: 49 KELDKATNHFNVNRILGQGGQGTVYKGMREDG----RIIAVKKS---------------- 88
+E D + ++G+G G VY G R G R+I +++
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHG-RWHGEVAIRLIDIERDNEDQLKAFKREVMAYR 84
Query: 89 ----KNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVA 144
+N V +G C+ ++ TLY + D + L +IA E+
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIV 140
Query: 145 GALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG---TSKFIAMDQTHVTTKIQ-G 200
+ YLH+ I H+D+KS N+ D + + DFG S + + +IQ G
Sbjct: 141 KGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNG 196
Query: 201 TFGYLDPE-YHQSSQLTDK--------SDVYSFGVVLVELLTGKKP---------IFSAG 242
+L PE Q S T++ SDV++ G + EL + P I+ G
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG 256
Query: 243 NTSQENVS 250
+ N+S
Sbjct: 257 TGMKPNLS 264
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGY 187
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGY 193
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGY 187
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGX 202
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGY 204
L Y+HSA + HRD+K N+ ++E K+ DFG ++ + T +V T+ Y
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 189
Query: 205 LDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
PE S +++ D++S G ++ E+LTGK
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 193
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 204
A+ ++HS I HRDIK N+L++ + K+ DFG++K + + V I F Y
Sbjct: 153 AVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAX-ICSRF-Y 207
Query: 205 LDPEYH-QSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTS 245
PE +++ T D++S G V EL+ G KP+FS G TS
Sbjct: 208 RAPELMLGATEYTPSIDLWSIGCVFGELILG-KPLFS-GETS 247
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 194
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 194
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 205
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 184
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 189
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 152 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVT------T 196
A+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T T
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 197 KIQGTFGYLDPEYH-QSSQLTDKSDVYSFGVVLVELLTGKKPIFSA 241
+ T Y PE S++ + DV+S G +L EL ++PIF
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPG 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 188
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGX 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 187
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 132 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 181
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 130 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 183
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 184 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPL--TWEMRLRIATEVAGALAYLHSAASSPIYHRD 162
+LV E ++GTL +L R + + + +W ++ L +LH+ + PI HRD
Sbjct: 105 VLVTELXTSGTLKTYLK-RFKVXKIKVLRSW------CRQILKGLQFLHTR-TPPIIHRD 156
Query: 163 IKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
+K NI + K+ D G + + + + GT + PE ++ + + DV
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXYEE-KYDESVDV 212
Query: 222 YSFGVVLVELLTGKKPIFSAGNTSQ 246
Y+FG +E T + P N +Q
Sbjct: 213 YAFGXCXLEXATSEYPYSECQNAAQ 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGY 184
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 187
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 130 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 183
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 184 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 143 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 192
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 178
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 152 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGY 188
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGY 205
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 131 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 184
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 185 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ G Q + D + + FP+ ++ L YLHS I H+DIK
Sbjct: 85 MVMEYCVCGM--QEMLDSVPEKRFPVC--QAHGYFCQLIDGLEYLHSQG---IVHKDIKP 137
Query: 166 TNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYLDPEYHQSSQLTD--KSD 220
N+LL K++ G ++ + A D T T+ QG+ + PE K D
Sbjct: 138 GNLLLTTGGTLKISALGVAEALHPFAADDTCRTS--QGSPAFQPPEIANGLDTFSGFKVD 195
Query: 221 VYSFGVVLVELLTGKKPIFSAGNTSQ--ENVSLAAYFVHSMRKNRLYDIL 268
++S GV L + TG P F N + EN+ +Y + L D+L
Sbjct: 196 IWSAGVTLYNITTGLYP-FEGDNIYKLFENIGKGSYAIPGDCGPPLSDLL 244
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 79/204 (38%), Gaps = 36/204 (17%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSK-------------------------NAVKLLGCC 98
+G+G G VYK G A+KK + N VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +LV+E + Q L L E L ++ +AY H +
Sbjct: 70 HTKKRLVLVFEHLD-----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS-QLTD 217
HRD+K N+L++ K+ADFG ++ + T +I T Y P+ S + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 218 KSDVYSFGVVLVELLTGKKPIFSA 241
D++S G + E++ G P+F
Sbjct: 181 TIDIWSVGCIFAEMVNG-TPLFPG 203
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 188
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 188
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E + G L D++ Q+F E + T + + YLH+ + HRD+K
Sbjct: 93 VVTELMKGGELL----DKILRQKFFSEREASAVLFT-ITKTVEYLHAQG---VVHRDLKP 144
Query: 166 TNIL-LDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 221
+NIL +DE ++ DFG +K + + + T T ++ PE + D+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDI 203
Query: 222 YSFGVVLVELLTGKKPIFSAGNTSQENV 249
+S GV+L +LTG P + + + E +
Sbjct: 204 WSLGVLLYTMLTGYTPFANGPDDTPEEI 231
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG + H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 36/204 (17%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSK-------------------------NAVKLLGCC 98
+G+G G VYK G A+KK + N VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +LV+E + Q L L E L ++ +AY H +
Sbjct: 70 HTKKRLVLVFEHLD-----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS-QLTD 217
HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 218 KSDVYSFGVVLVELLTGKKPIFSA 241
D++S G + E++ G P+F
Sbjct: 181 TIDIWSVGCIFAEMVNG-APLFPG 203
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 36/204 (17%)
Query: 64 LGQGGQGTVYKGMREDGRIIAVKKSK-------------------------NAVKLLGCC 98
+G+G G VYK G A+KK + N VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 99 LETEVPLLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPI 158
+ +LV+E + Q L L E L ++ +AY H +
Sbjct: 70 HTKKRLVLVFEHLD-----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 159 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS-QLTD 217
HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 218 KSDVYSFGVVLVELLTGKKPIFSA 241
D++S G + E++ G P+F
Sbjct: 181 TIDIWSVGCIFAEMVNG-TPLFPG 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 105 LLVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIK 164
+LV E++ G L+ DR+ ++ + LT + ++ + ++H I H D+K
Sbjct: 162 VLVMEYVDGGELF----DRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLK 214
Query: 165 STNILLDER--YRAKVADFGTSKFIAMDQTHVTTKIQGTFG---YLDPEYHQSSQLTDKS 219
NIL R + K+ DFG ++ + K++ FG +L PE ++ +
Sbjct: 215 PENILCVNRDAKQIKIIDFGLAR-----RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPT 269
Query: 220 DVYSFGVVLVELLTGKKPIFSAGNTSQENVSLAAYF 255
D++S GV+ LL+G P + N LA +
Sbjct: 270 DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ D+G ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L Y+HSA I HRD+K +N+ ++E ++ DFG +A T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVATRWYR 195
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
PE + +++ D++S G ++ ELL GK
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 147 LAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 206
L Y+HSA I HRD+K +N+ ++E ++ DFG +A T T Y
Sbjct: 136 LKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG----LARQADEEMTGYVATRWYRA 188
Query: 207 PEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
PE + +++ D++S G ++ ELL GK
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T +V T+
Sbjct: 162 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 215
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + + + D++S G ++ ELLTG+
Sbjct: 216 --WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L Y+HSA I HRD+K +N+ ++E ++ DFG +A T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVATRWYR 195
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
PE + +++ D++S G ++ ELL GK
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 29/199 (14%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK----KSKNA-------VKLLGCCLETEVPLLVYEFI 111
LG G G VYK +E G + A K KS+ +++L C + L+ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 112 SNGTLYQHLH-------DRLQNQ-EFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDI 163
+G L+ + D + + + LT + ++ AL +LHS I HRD+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDL 143
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTD-----K 218
K+ N+L+ ++ADFG S + GT ++ PE + D K
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 202
Query: 219 SDVYSFGVVLVELLTGKKP 237
+D++S G+ L+E+ + P
Sbjct: 203 ADIWSLGITLIEMAQIEPP 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 29/199 (14%)
Query: 64 LGQGGQGTVYKGM-REDGRIIAVK----KSKNA-------VKLLGCCLETEVPLLVYEFI 111
LG G G VYK +E G + A K KS+ +++L C + L+ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 112 SNGTLYQHLH-------DRLQNQ-EFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDI 163
+G L+ + D + + + LT + ++ AL +LHS I HRD+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDL 135
Query: 164 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTD-----K 218
K+ N+L+ ++ADFG S + GT ++ PE + D K
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 194
Query: 219 SDVYSFGVVLVELLTGKKP 237
+D++S G+ L+E+ + P
Sbjct: 195 ADIWSLGITLIEMAQIEPP 213
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 143 VAGALAYLHSAASSPIYHRDIKSTNIL-LDERYRA---KVADFGTSKFIAMDQTHVTTKI 198
+ + YLH+ + HRD+K +NIL +DE ++ DFG +K + + + T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 199 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSAGNTSQENV 249
T ++ PE + D++S GV+L LTG P + + + E +
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEI 231
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ S G L++ + + + E E R ++G ++Y H+ + HRD+K
Sbjct: 92 IVMEYASGGELFERICNAGRFSED----EARFFFQQLISG-VSYCHAMQ---VCHRDLKL 143
Query: 166 TNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVY 222
N LLD R K+ FG SK + +T GT Y+ PE + K +DV+
Sbjct: 144 ENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVW 201
Query: 223 SFGVVLVELLTGKKP 237
S GV L +L G P
Sbjct: 202 SCGVTLYVMLVGAYP 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
+ YLH I HRDIK +N+L+ E K+ADFG S ++ + GT ++
Sbjct: 149 GIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAFM 204
Query: 206 DPEYHQSSQ--LTDKS-DVYSFGVVLVELLTGKKP 237
PE ++ + K+ DV++ GV L + G+ P
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 201
++ L Y+HSA I HRD+K +N+ ++E K+ DF ++A T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF----YLARHTDDEMTGYVAT 185
Query: 202 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 10/174 (5%)
Query: 70 GTVYKGMREDGRIIAVKKSKNAVKLLGCCLETEVPLLVYEFISNGTLYQHLHDRLQNQEF 129
G + ++ + I + K + V+LL + +V+EF+ L + R + F
Sbjct: 67 GLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR-ADAGF 125
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKF 186
+ + ++ AL Y H + I HRD+K N+LL + + K+ DFG +
Sbjct: 126 VYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA-- 180
Query: 187 IAMDQTHVTTKIQ-GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 239
I + ++ + + GT ++ PE + DV+ GV+L LL+G P +
Sbjct: 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 34/152 (22%)
Query: 140 ATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAK---------------------- 177
E+ AL YL + + H D+K NILLD+ Y K
Sbjct: 143 CIEILKALNYLRKMSLT---HTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKST 199
Query: 178 ---VADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTG 234
+ DFG + F ++ I T Y PE + SD++SFG VL EL TG
Sbjct: 200 GIKLIDFGCATF----KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 235 KKPIFSAGNTSQENVSLAAYFVHSMRKNRLYD 266
+ + E++++ + + KN LY+
Sbjct: 256 S--LLFRTHEHMEHLAMMESIIQPIPKNMLYE 285
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 106 LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKS 165
+V E+ S G L++ + + + E E R ++G ++Y H+ + HRD+K
Sbjct: 92 IVMEYASGGELFERICNAGRFSED----EARFFFQQLISG-VSYCHAMQ---VCHRDLKL 143
Query: 166 TNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVY 222
N LLD R K+ FG SK + T GT Y+ PE + K +DV+
Sbjct: 144 ENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGKVADVW 201
Query: 223 SFGVVLVELLTGKKP 237
S GV L +L G P
Sbjct: 202 SCGVTLYVMLVGAYP 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 130 PLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-- 187
PL+ + L+I + A+ ++H PI HRD+K N+LL + K+ DFG++ I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190
Query: 188 -----------AMDQTHVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLT 233
A+ + +T T Y PE + + + +K D+++ G +L L
Sbjct: 191 YPDYSWSAQRRALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 234 GKKP 237
+ P
Sbjct: 249 RQHP 252
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQG 200
++ L Y+HSA I HRD+K +N+ ++E K+ FG ++ + T +V T+
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR--- 186
Query: 201 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 37/210 (17%)
Query: 56 NHFNVNRILGQGGQGTVYKGM-REDGRIIAVKKSKNAVKLLGCCLETEVPL--------- 105
+++++ LG G G V++ + + GR+ K L ++ E+ +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 106 --------------LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLH 151
L+ EF+S G L+ DR+ +++ ++ + + L ++H
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELF----DRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 152 SAASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQ-THVTTKIQGTFGYLDPE 208
+ I H DIK NI+ + + + K+ DFG + + D+ VTT T + PE
Sbjct: 167 EHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPE 220
Query: 209 YHQSSQLTDKSDVYSFGVVLVELLTGKKPI 238
+ +D+++ GV+ LL+G P
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ D G ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 123
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 182 STAVDIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 124
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 125 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 182
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 183 STAVDIWSLGCIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 47/203 (23%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHD-----RLQNQEFPLTWEMRLRIATEVAGALAYLH 151
+ TE L LV+EF L+Q L D L PL ++ LA+ H
Sbjct: 71 -IHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQ----GLAFCH 120
Query: 152 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 211
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 212 SSQLTDKS-DVYSFGVVLVELLT 233
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 123
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 182 STAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 122
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 180
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 181 STAVDIWSLGCIFAEMVT 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 75 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 127
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 128 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 185
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 186 STAVDIWSLGCIFAEMVT 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 78 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 130
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 131 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 188
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 189 STAVDIWSLGCIFAEMVT 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
L YLH I HRD+K N+LLDE K+ADFG +K ++ T Y
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYR 179
Query: 206 DPEYHQSSQLTDKS-DVYSFGVVLVELL 232
PE +++ D+++ G +L ELL
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 122
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 180
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 181 STAVDIWSLGCIFAEMVT 198
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ D G ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 123
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYY 181
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 182 STAVDIWSLGCIFAEMVT 199
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 202
L Y+H+A I HRD+K N+ ++E K+ DFG ++ +++ G T
Sbjct: 140 GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVVTR 189
Query: 203 GYLDPEY-HQSSQLTDKSDVYSFGVVLVELLTGK 235
Y PE + T D++S G ++ E++TGK
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 142 EVAGALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG- 200
++ L Y+HSA I HRD+K +N+ ++E K+ D G ++ H ++ G
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-------HTDDEMTGY 182
Query: 201 --TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 235
T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 78 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 130
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 131 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYY 188
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 189 STAVDIWSLGCIFAEMVT 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+S L PL ++ LA+ HS
Sbjct: 72 -IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 124
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 125 -VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 183 STAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+S L PL ++ LA+ HS
Sbjct: 74 -IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 126
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 127 QEFPLTWEMRLRIATEVAGALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSK 185
++ PL E ++ L Y+HSA + HRD+K N+ ++ E K+ DFG ++
Sbjct: 113 EQGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLAR 169
Query: 186 FIAMDQTHVTTKIQG--TFGYLDPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSAG 242
+ +H +G T Y P S + T D+++ G + E+LTGK A
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 243 NTSQENVSLAAY-FVHSMRKNRLYDIL 268
Q + L + VH + L ++
Sbjct: 230 ELEQMQLILESIPVVHEEDRQELLSVI 256
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 158 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTD 217
I HRDIK NI++ E + K+ DFG++ ++ + T GT Y PE +
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIEYCAPEVLMGNPYRG 208
Query: 218 KS-DVYSFGVVLVELLTGKKP 237
+++S GV L L+ + P
Sbjct: 209 PELEMWSLGVTLYTLVFEENP 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+S L PL ++ LA+ HS
Sbjct: 73 -IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 125
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 126 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 184 STAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+S L PL ++ LA+ HS
Sbjct: 74 -IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 126
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ L++ HS
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLSFCHSHR-- 123
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 182 STAVDIWSLGCIFAEMVT 199
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKK----------SKNAVKLLGCCLETEVPLLV--YEF 110
+G+G G VYK + G ++A+KK A++ + E P +V +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 111 ISNGT----LYQHLHDRLQN-------QEFPLTWEMRLRIATEVAGALAYLHSAASSPIY 159
I +++H+H L+ PL + ++ LA+ HS +
Sbjct: 70 IHTENKLYLVFEHVHQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLAFCHSHR---VL 124
Query: 160 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 219
HRD+K N+L++ K+ADFG ++ + T ++ T Y PE + +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 220 -DVYSFGVVLVELLT 233
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMD---QTHVTTK-IQG 200
L YLH+ I H D+K+ N+LL + RA + DFG + + D ++ +T I G
Sbjct: 176 GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
T ++ PE K D++S +++ +L G P
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 124
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 125 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 183 STAVDIWSLGCIFAEMVT 200
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 205
+ +LHSA I HRD+K +NI++ K+ DFG ++ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 206 DPEYHQSSQLTDKSDVYSFGVVLVELLTG 234
PE + D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 75 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 127
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 128 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 185
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 186 STAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 74 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 126
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 73 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 125
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 126 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 184 STAVDIWSLGCIFAEMVT 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 74 -IHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 126
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 123
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 182 STAVDIWSLGCIFAEMVT 199
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 146 ALAYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMD---QTHVTTK-IQG 200
L YLH+ I H D+K+ N+LL + RA + DFG + + D ++ +T I G
Sbjct: 162 GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 201 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 237
T ++ PE K D++S +++ +L G P
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 73 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 125
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 126 -VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 184 STAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 124
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 125 -VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 183 STAVDIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 74 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 126
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 64 LGQGGQGTVYKGMRE-DGRIIAVKKSK-------------------------NAVKLLGC 97
+G+G G VYK + G ++A+KK + N VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 98 CLETEVPL-LVYEFISNGTLYQHLHDRLQNQEFPLTWEMRLRIATEVAGALAYLHSAASS 156
+ TE L LV+EF+ L PL ++ LA+ HS
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ----GLAFCHSHR-- 123
Query: 157 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 216
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 217 DKS-DVYSFGVVLVELLT 233
+ D++S G + E++T
Sbjct: 182 STAVDIWSLGCIFAEMVT 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,813,114
Number of Sequences: 62578
Number of extensions: 345476
Number of successful extensions: 2941
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 865
Number of HSP's gapped (non-prelim): 1267
length of query: 331
length of database: 14,973,337
effective HSP length: 99
effective length of query: 232
effective length of database: 8,778,115
effective search space: 2036522680
effective search space used: 2036522680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)