Query 020105
Match_columns 331
No_of_seqs 177 out of 633
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 11:52:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020105.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020105hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3d7ca1 a.29.2.1 (A:731-832) G 100.0 1.2E-29 8.9E-34 204.6 11.9 98 228-328 4-101 (102)
2 d1e6ia_ a.29.2.1 (A:) GCN5 {Ba 100.0 5.3E-29 3.9E-33 203.6 12.8 99 227-328 4-102 (111)
3 d1wuma1 a.29.2.1 (A:715-832) P 99.9 1.3E-28 9.7E-33 203.4 10.0 99 227-328 14-112 (118)
4 d1eqfa1 a.29.2.1 (A:1359-1497) 99.9 7.4E-28 5.4E-32 204.1 12.7 99 227-328 27-125 (139)
5 d3dwya1 a.29.2.1 (A:1084-1197) 99.9 8.8E-28 6.4E-32 197.1 11.1 101 226-329 6-109 (114)
6 d1eqfa2 a.29.2.1 (A:1498-1625) 99.9 6.6E-28 4.8E-32 202.1 10.0 90 236-328 20-109 (128)
7 d1x41a1 a.4.1.1 (A:8-54) Trans 96.5 0.00076 5.5E-08 45.8 3.3 29 3-39 17-45 (47)
8 d1w0ua_ a.4.1.4 (A:) Telomeric 95.5 0.0029 2.1E-07 44.0 2.1 34 3-42 18-51 (55)
9 d1w0ta_ a.4.1.4 (A:) DNA-bindi 95.2 0.0043 3.1E-07 42.7 2.4 34 3-42 18-51 (52)
10 d1gvda_ a.4.1.3 (A:) c-Myb, DN 95.2 0.0029 2.1E-07 43.7 1.3 29 3-39 19-47 (52)
11 d1guua_ a.4.1.3 (A:) c-Myb, DN 94.6 0.0053 3.9E-07 41.8 1.4 29 3-39 17-45 (50)
12 d2cjja1 a.4.1.3 (A:8-70) Radia 94.4 0.014 1E-06 41.4 3.4 33 4-44 18-53 (63)
13 d2iw5b1 a.4.1.3 (B:376-440) RE 93.4 0.018 1.3E-06 40.7 2.4 33 4-45 22-54 (65)
14 d2cqra1 a.4.1.3 (A:7-66) DnaJ 92.7 0.021 1.5E-06 39.9 1.8 29 4-40 29-60 (60)
15 d2ckxa1 a.4.1.3 (A:578-660) Te 91.5 0.066 4.8E-06 39.7 3.5 36 3-42 16-51 (83)
16 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 90.6 0.097 7.1E-06 36.6 3.5 33 4-45 19-51 (65)
17 d1xc5a1 a.4.1.3 (A:413-480) Nu 88.4 0.11 8.2E-06 36.8 2.4 31 4-43 34-64 (68)
18 d1gv2a2 a.4.1.3 (A:144-190) c- 86.9 0.094 6.8E-06 35.1 1.1 30 4-42 18-47 (47)
19 d1ug2a_ a.4.1.3 (A:) 2610100b2 78.9 0.68 5E-05 35.5 3.3 37 4-48 50-88 (95)
20 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 77.1 0.98 7.1E-05 31.5 3.4 31 6-45 22-53 (59)
21 d1zrja1 a.140.2.1 (A:1-37) Het 71.8 0.72 5.3E-05 29.5 1.4 32 66-97 3-35 (37)
22 d1igna1 a.4.1.6 (A:360-445) DN 67.8 0.75 5.4E-05 34.2 0.9 36 3-46 17-58 (86)
23 d1wgxa_ a.4.1.3 (A:) Hypotheti 67.6 1.5 0.00011 31.8 2.6 28 4-39 28-55 (73)
24 d2do1a1 a.140.2.1 (A:5-46) Nuc 50.3 3.8 0.00028 26.4 1.9 29 65-93 2-38 (42)
25 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 24.7 30 0.0022 24.3 3.3 23 71-93 28-50 (67)
26 d2crga1 a.4.1.3 (A:8-64) Metas 23.8 20 0.0015 23.8 2.2 30 4-42 18-48 (57)
27 d1h1js_ a.140.2.1 (S:) S/mar D 22.4 22 0.0016 23.0 2.0 33 66-98 5-38 (44)
No 1
>d3d7ca1 a.29.2.1 (A:731-832) GCN5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1.2e-29 Score=204.58 Aligned_cols=98 Identities=27% Similarity=0.351 Sum_probs=94.8
Q ss_pred hhHHHHHHHHHHhcCCCCCccccccCCcccchhHHHhhccCCCHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHhhhCCC
Q 020105 228 SEPLIRLLDLIRTHNHHLPSLFERRLKSQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPK 307 (331)
Q Consensus 228 ~q~L~~iL~~L~~hk~~~a~~F~~PVd~~e~PdY~~iIk~PMDL~TIk~KL~~g~Y~S~~~EF~rDl~Lmf~NA~~YN~~ 307 (331)
.+.|..||+.|.+|+. ++||..||++.++|+|+++|++||||+||++||++|.|.++. +|..||.|||.||+.||++
T Consensus 4 ~~~l~~il~~l~~~~~--s~~F~~pv~~~~~pdY~~~I~~PmdL~tI~~kl~~~~Y~s~~-~f~~D~~li~~Na~~yN~~ 80 (102)
T d3d7ca1 4 YTTLKNLLAQIKSHPS--AWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRK-LFVADLQRVIANCREYNPP 80 (102)
T ss_dssp HHHHHHHHHHHHHSGG--GGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCCSHH-HHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHhCCC--CCccCCCCChhhCcCHHHHcCCccCHHHHHHHhccCccCCHH-HHHHHHHHHHHHHHHHCCC
Confidence 3568999999999999 999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q 020105 308 ASLESEAAHQLRNLVSNEIKR 328 (331)
Q Consensus 308 ~S~~~~~A~~Lr~l~~k~m~k 328 (331)
+|++|.+|..|+++|.++|++
T Consensus 81 ~s~~~~~A~~l~~~f~~~~ke 101 (102)
T d3d7ca1 81 DSEYCRCASALEKFFYFKLKE 101 (102)
T ss_dssp TSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999875
No 2
>d1e6ia_ a.29.2.1 (A:) GCN5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=5.3e-29 Score=203.56 Aligned_cols=99 Identities=21% Similarity=0.401 Sum_probs=95.7
Q ss_pred chhHHHHHHHHHHhcCCCCCccccccCCcccchhHHHhhccCCCHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHhhhCC
Q 020105 227 ESEPLIRLLDLIRTHNHHLPSLFERRLKSQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 306 (331)
Q Consensus 227 ~~q~L~~iL~~L~~hk~~~a~~F~~PVd~~e~PdY~~iIk~PMDL~TIk~KL~~g~Y~S~~~EF~rDl~Lmf~NA~~YN~ 306 (331)
..+.|..||+.|++|+. ||||.+||++.++|+||++|++||||+||++||.+|.|.++. +|..||.|||.||+.||+
T Consensus 4 ~~~~l~~il~~l~~~~~--a~pF~~pvd~~~~pdY~~vI~~PmdL~tI~~kl~~~~Y~s~~-~f~~Dv~li~~Na~~yN~ 80 (111)
T d1e6ia_ 4 HDAAIQNILTELQNHAA--AWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKME-DFIYDARLVFNNCRMYNG 80 (111)
T ss_dssp THHHHHHHHHHHHHSTT--CGGGSSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCSSHH-HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCCC--ChhhcCCCCchhCcCHHHHcCCchhHHHHHHHHHccccchHH-HHHHHHHHHHHHHHHHCC
Confidence 35789999999999999 999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHh
Q 020105 307 KASLESEAAHQLRNLVSNEIKR 328 (331)
Q Consensus 307 ~~S~~~~~A~~Lr~l~~k~m~k 328 (331)
++|+++.+|..|+++|.+.|++
T Consensus 81 ~~s~i~~~A~~l~~~f~~~~~~ 102 (111)
T d1e6ia_ 81 ENTSYYKYANRLEKFFNNKVKE 102 (111)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999865
No 3
>d1wuma1 a.29.2.1 (A:715-832) P300/CAF histone acetyltransferase bromodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.3e-28 Score=203.36 Aligned_cols=99 Identities=26% Similarity=0.364 Sum_probs=95.6
Q ss_pred chhHHHHHHHHHHhcCCCCCccccccCCcccchhHHHhhccCCCHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHhhhCC
Q 020105 227 ESEPLIRLLDLIRTHNHHLPSLFERRLKSQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 306 (331)
Q Consensus 227 ~~q~L~~iL~~L~~hk~~~a~~F~~PVd~~e~PdY~~iIk~PMDL~TIk~KL~~g~Y~S~~~EF~rDl~Lmf~NA~~YN~ 306 (331)
-...|..||+.|++|+. +++|.+||+..++|+||++|++||||+||++||++|.|.++. +|..||.|||.||+.||+
T Consensus 14 l~~~l~~il~~l~~~~~--a~~F~~pv~~~~~pdY~~iI~~PmdL~~I~~kl~~~~Y~s~~-ef~~Dv~li~~Na~~yn~ 90 (118)
T d1wuma1 14 LYSTLKSILQQVKSHQS--AWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKK-LFMADLQRVFTNCKEYNP 90 (118)
T ss_dssp HHHHHHHHHHHHHHSSS--CHHHHSCCCSSSSSSCTTTCSSCCCHHHHHHHHTTTCCCSSH-HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCCC--cCcccCCCChhhCcCHHHHcCChhhHHHHHHHhcccccCchH-HHHHHHHHHHHHHHHHCC
Confidence 35679999999999999 999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHh
Q 020105 307 KASLESEAAHQLRNLVSNEIKR 328 (331)
Q Consensus 307 ~~S~~~~~A~~Lr~l~~k~m~k 328 (331)
++|++|.+|..|+.+|.++|++
T Consensus 91 ~~s~~~~~A~~l~~~f~~~~~e 112 (118)
T d1wuma1 91 PESEYYKCANILEKFFFSKIKE 112 (118)
T ss_dssp TTSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876
No 4
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=7.4e-28 Score=204.15 Aligned_cols=99 Identities=17% Similarity=0.311 Sum_probs=94.6
Q ss_pred chhHHHHHHHHHHhcCCCCCccccccCCcccchhHHHhhccCCCHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHhhhCC
Q 020105 227 ESEPLIRLLDLIRTHNHHLPSLFERRLKSQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 306 (331)
Q Consensus 227 ~~q~L~~iL~~L~~hk~~~a~~F~~PVd~~e~PdY~~iIk~PMDL~TIk~KL~~g~Y~S~~~EF~rDl~Lmf~NA~~YN~ 306 (331)
..+.|..||+.|..|+. +|+|.+||++.++||||++|++||||.||++||++|.|.++. +|..||.|||+||+.||+
T Consensus 27 l~~~l~~il~~l~~~~~--s~pF~~Pvd~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~s~~-~f~~D~~li~~Na~~yN~ 103 (139)
T d1eqfa1 27 LSSILESIINDMRDLPN--TYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSRE-EFREHLELIVKNSATYNG 103 (139)
T ss_dssp HHHHHHHHHHHHHTSTT--CGGGTSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCSSHH-HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCC--chhhhCCCChhhccCHHHHcCChhhHHHHHHHHHcCCcCCHH-HHHHHHHHHHHHHHHHCC
Confidence 34568889999999999 999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHh
Q 020105 307 KASLESEAAHQLRNLVSNEIKR 328 (331)
Q Consensus 307 ~~S~~~~~A~~Lr~l~~k~m~k 328 (331)
++|+++.+|..|..+|.+.|++
T Consensus 104 ~~s~i~~~A~~L~~~~~~~~~~ 125 (139)
T d1eqfa1 104 PKHSLTQISQSMLDLCDEKLKE 125 (139)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988765
No 5
>d3dwya1 a.29.2.1 (A:1084-1197) CREB-binding protein, CBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=8.8e-28 Score=197.10 Aligned_cols=101 Identities=24% Similarity=0.403 Sum_probs=94.6
Q ss_pred cchhHHHHHHHHHHhc-CCCCCccccccCCcc--cchhHHHhhccCCCHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHh
Q 020105 226 AESEPLIRLLDLIRTH-NHHLPSLFERRLKSQ--ESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAI 302 (331)
Q Consensus 226 ~~~q~L~~iL~~L~~h-k~~~a~~F~~PVd~~--e~PdY~~iIk~PMDL~TIk~KL~~g~Y~S~~~EF~rDl~Lmf~NA~ 302 (331)
.-.+.|+.+|+.|++| +. |++|..||++. ++||||++|++||||.||++||.+|.|.++. +|.+||.|||+||+
T Consensus 6 el~~~l~~~l~~l~~~~p~--a~pF~~pvd~~~~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~s~~-ef~~Dv~li~~Na~ 82 (114)
T d3dwya1 6 ELRQALMPTLEALYRQDPE--SLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPW-QYVDDVWLMFNNAW 82 (114)
T ss_dssp HHHHHHHHHHHHHHTCTTT--TGGGSSCCCHHHHTCTTHHHHCSSCCCHHHHHHHHHTTCCSSHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcC--CCccCCCCChhhccCCCHHHHcCCCCCHHHHHHHHHcCccccHH-HHHHHHHHHHHHHH
Confidence 3456799999999977 68 99999999976 7999999999999999999999999999999 99999999999999
Q ss_pred hhCCCCCHHHHHHHHHHHHHHHHHHhh
Q 020105 303 VYFPKASLESEAAHQLRNLVSNEIKRT 329 (331)
Q Consensus 303 ~YN~~~S~~~~~A~~Lr~l~~k~m~k~ 329 (331)
.||+++|++|.+|..|+++|.+++.+-
T Consensus 83 ~yN~~~s~~~~~A~~L~~~f~~~~~~i 109 (114)
T d3dwya1 83 LYNRKTSRVYKFCSKLAEVFEQEIDPV 109 (114)
T ss_dssp HHSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988764
No 6
>d1eqfa2 a.29.2.1 (A:1498-1625) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=6.6e-28 Score=202.06 Aligned_cols=90 Identities=18% Similarity=0.317 Sum_probs=85.4
Q ss_pred HHHHhcCCCCCccccccCCcccchhHHHhhccCCCHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q 020105 236 DLIRTHNHHLPSLFERRLKSQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAA 315 (331)
Q Consensus 236 ~~L~~hk~~~a~~F~~PVd~~e~PdY~~iIk~PMDL~TIk~KL~~g~Y~S~~~EF~rDl~Lmf~NA~~YN~~~S~~~~~A 315 (331)
+.+..++. ||||.+||+++.+|+||++|++||||+||++||++|.|.++. +|..||.|||.||+.||+++|++|.+|
T Consensus 20 ~~~~~~p~--a~pF~~pVd~~~~PdY~~vIk~PmDL~tI~~kl~~~~Y~s~~-ef~~Dv~li~~Na~~yN~~~s~i~~~A 96 (128)
T d1eqfa2 20 QKMMAVPD--SWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRE-SFLDDVNLILANSVKYNGPESQYTKTA 96 (128)
T ss_dssp HTTTTSTT--CGGGTSCCCTTTSTTHHHHCSSCCCHHHHHHHHHTTCCSSHH-HHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHcCCC--CChhcCCCCcccCcCHHHHcCCcccHHHHHHHHHhhccccHH-HHHHHHHHHHHHHHHHCCCCCHHHHHH
Confidence 45667788 999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 020105 316 HQLRNLVSNEIKR 328 (331)
Q Consensus 316 ~~Lr~l~~k~m~k 328 (331)
..|..+|.+.+++
T Consensus 97 ~~L~~~~~~~l~~ 109 (128)
T d1eqfa2 97 QEIVNVCYQTLTE 109 (128)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888764
No 7
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.55 E-value=0.00076 Score=45.82 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=25.8
Q ss_pred CCCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHH
Q 020105 3 NVGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRD 39 (331)
Q Consensus 3 ~rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~d 39 (331)
..||..+|..||..|.+| ||..|+.||..
T Consensus 17 ~~~G~~nW~~Ia~~~~~R--------t~~Qcr~r~~~ 45 (47)
T d1x41a1 17 MDCGFGNWQDVANQMCTK--------TKEECEKHYMK 45 (47)
T ss_dssp HHTCTTCHHHHHHHHTTS--------CHHHHHHHHHH
T ss_pred HHHCCccHHHHHHHcCCC--------CHHHHHHHHHH
Confidence 369999999999999988 67999999974
No 8
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.46 E-value=0.0029 Score=44.05 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=26.4
Q ss_pred CCCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHh
Q 020105 3 NVGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLER 42 (331)
Q Consensus 3 ~rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~r 42 (331)
.+||++.|..||.++. .+ . .|+..|+.||+-|.+
T Consensus 18 ~~~G~~~W~~I~~~~~----~~-~-Rt~~q~k~Rwrn~~k 51 (55)
T d1w0ua_ 18 QKYGEGNWAAISKNYP----FV-N-RTAVMIKDRWRTMKR 51 (55)
T ss_dssp HHHCTTCHHHHHHHSC----CS-S-CCHHHHHHHHHHHHH
T ss_pred HHhCCChHHHHHhhcC----CC-C-cCHHHHHHHHHHHhc
Confidence 4699999999998842 11 1 289999999998865
No 9
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.22 E-value=0.0043 Score=42.70 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHh
Q 020105 3 NVGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLER 42 (331)
Q Consensus 3 ~rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~r 42 (331)
..||++.|..||.++- +. . .|+..|+.||+-|.+
T Consensus 18 ~~~G~~~W~~I~~~~~----~~-~-Rt~~q~r~Rw~nl~K 51 (52)
T d1w0ta_ 18 RKYGEGNWSKILLHYK----FN-N-RTSVMLKDRWRTMKK 51 (52)
T ss_dssp HHHCTTCHHHHHHHSC----CS-S-CCHHHHHHHHHHHHT
T ss_pred HHHCCCCHHHHHhhcC----CC-C-CCHHHHHHHHHHHHC
Confidence 4699999999997641 11 1 389999999999874
No 10
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.16 E-value=0.0029 Score=43.66 Aligned_cols=29 Identities=10% Similarity=0.272 Sum_probs=25.2
Q ss_pred CCCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHH
Q 020105 3 NVGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRD 39 (331)
Q Consensus 3 ~rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~d 39 (331)
..||+..|..||..|..| |+..|+.||..
T Consensus 19 ~~~g~~~W~~Ia~~l~~R--------t~~qc~~Rw~~ 47 (52)
T d1gvda_ 19 QKYGPKRWSVIAKHLKGR--------IGKQCRERWHN 47 (52)
T ss_dssp HHHCTTCHHHHHTTSTTC--------CHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHCCC--------CHHHHHHHHHh
Confidence 369999999999988776 68999999985
No 11
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.57 E-value=0.0053 Score=41.79 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=25.4
Q ss_pred CCCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHH
Q 020105 3 NVGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRD 39 (331)
Q Consensus 3 ~rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~d 39 (331)
.+||..+|..||..|-.| |+..|+.||.-
T Consensus 17 ~~~g~~~W~~Ia~~~~~R--------t~~qcr~Rw~~ 45 (50)
T d1guua_ 17 EQNGTDDWKVIANYLPNR--------TDVQCQHRWQK 45 (50)
T ss_dssp HHHCSSCHHHHHHTSTTC--------CHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHCCC--------CHHHHHHHHHh
Confidence 479999999999998776 67999999975
No 12
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=94.42 E-value=0.014 Score=41.36 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=28.0
Q ss_pred CCCCCC---hhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHhhh
Q 020105 4 VGGVGA---SMRLSVELQTKTSLPHLLTTPQCCKQKYRDLERRF 44 (331)
Q Consensus 4 rHGt~~---WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~rRf 44 (331)
.||.++ |..||..|..| |+..|+.||..|....
T Consensus 18 ~~~~~~~~~W~~Ia~~l~gR--------t~~qc~~r~~~L~~di 53 (63)
T d2cjja1 18 VYDKDTPDRWANVARAVEGR--------TPEEVKKHYEILVEDI 53 (63)
T ss_dssp HSCTTCTTHHHHHHHHSTTC--------CHHHHHHHHHHHHHHH
T ss_pred HHCCCCchHHHHHHHHcCCC--------CHHHHHHHHHHHHHHh
Confidence 477765 99999999988 6799999999987653
No 13
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.39 E-value=0.018 Score=40.71 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=29.0
Q ss_pred CCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHhhhc
Q 020105 4 VGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLERRFN 45 (331)
Q Consensus 4 rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~rRfs 45 (331)
.||. +|..||.-|.+| |+..|+.+|..+++||.
T Consensus 22 ~~G~-~w~~Ia~~~~~k--------t~~q~~~~y~~~~k~~~ 54 (65)
T d2iw5b1 22 KYGR-DFQAISDVIGNK--------SVVQVKNFFVNYRRRFN 54 (65)
T ss_dssp HHSS-CHHHHHHHHSSC--------CHHHHHHHHHHTTTTTT
T ss_pred HhCc-hHHHHHHHcCCC--------CHHHHHHHHHHHHhhcC
Confidence 5784 699999999887 67999999999999986
No 14
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.72 E-value=0.021 Score=39.93 Aligned_cols=29 Identities=17% Similarity=0.254 Sum_probs=24.0
Q ss_pred CCCCCC---hhhHHHHHhhcCCCCCCCCChHhHHHhHHHH
Q 020105 4 VGGVGA---SMRLSVELQTKTSLPHLLTTPQCCKQKYRDL 40 (331)
Q Consensus 4 rHGt~~---WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL 40 (331)
.||.++ |..||..|..| |+..|+.||+-|
T Consensus 29 ~~~~~~~~~W~~IA~~l~~R--------t~~qc~~R~~~L 60 (60)
T d2cqra1 29 QYPRGSSDCWDKIARCVPSK--------SKEDCIARYKLL 60 (60)
T ss_dssp HSCSSSHHHHHHHGGGCSSS--------CHHHHHHHHHHH
T ss_pred HcCCccchHHHHHHHHcCCC--------CHHHHHHHHHHC
Confidence 367764 99999988766 689999999876
No 15
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=91.50 E-value=0.066 Score=39.73 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=27.2
Q ss_pred CCCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHh
Q 020105 3 NVGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLER 42 (331)
Q Consensus 3 ~rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~r 42 (331)
.+||++.|..||..+-.. ... .|+..|+.||+.|-+
T Consensus 16 ~~~G~~~W~~I~~~~~~~---~~~-Rt~~qck~RWrn~l~ 51 (83)
T d2ckxa1 16 EHLGTGRWRDVKMRAFDN---ADH-RTYVDLKDKWKTLVH 51 (83)
T ss_dssp HHHCSSCHHHHHHHHCTT---CTT-SCHHHHHHHHHHHHH
T ss_pred HHHCcccHHHHHHHHHhh---ccC-CCHHHHHHHHHHHhh
Confidence 479999999999876322 112 399999999988654
No 16
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.59 E-value=0.097 Score=36.56 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=27.2
Q ss_pred CCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHhhhc
Q 020105 4 VGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLERRFN 45 (331)
Q Consensus 4 rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~rRfs 45 (331)
.|| .+|..||..|-+| |+..|+.+|.-+.++-.
T Consensus 19 ~~G-~~W~~Ia~~~~~R--------t~~q~k~ry~~~~~~~~ 51 (65)
T d2cu7a1 19 KFG-RRWTKISKLIGSR--------TVLQVKSYARQYFKNKV 51 (65)
T ss_dssp HTC-SCHHHHHHHHSSS--------CHHHHHHHHHHHHHHHS
T ss_pred Hhc-chHHHHHHHcCCC--------CHHHHHHHHHHHHHHHH
Confidence 588 5999999999877 67999999987666544
No 17
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.43 E-value=0.11 Score=36.79 Aligned_cols=31 Identities=16% Similarity=0.015 Sum_probs=26.1
Q ss_pred CCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHhh
Q 020105 4 VGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLERR 43 (331)
Q Consensus 4 rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~rR 43 (331)
.||+ +|..||.-|.+| |+..|+.+|...+++
T Consensus 34 ~~G~-~w~~Ia~~~~~r--------t~~q~~~~yy~~kk~ 64 (68)
T d1xc5a1 34 QHPK-NFGLIASFLERK--------TVAECVLYYYLTKKN 64 (68)
T ss_dssp HTTS-CSSSHHHHTTTS--------CHHHHHHHHHHHTTT
T ss_pred HHCC-cHHHHHHHcCCC--------CHHHHHHHHHHHHCc
Confidence 4896 799999999888 579999999877654
No 18
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.93 E-value=0.094 Score=35.05 Aligned_cols=30 Identities=17% Similarity=0.128 Sum_probs=24.2
Q ss_pred CCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHh
Q 020105 4 VGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRDLER 42 (331)
Q Consensus 4 rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~r 42 (331)
.||. .|..||.-|-.| |+..|+.+|..+.|
T Consensus 18 ~~G~-~W~~Ia~~~~gR--------t~~~~knr~~~~lr 47 (47)
T d1gv2a2 18 RLGN-RWAEIAKLLPGR--------TDNAIKNHWNSTMR 47 (47)
T ss_dssp HHSS-CHHHHHTTCTTC--------CHHHHHHHHHHHTC
T ss_pred HHhh-HHHHHHhHcCCC--------CHHHHHHHHHHHcC
Confidence 5887 699999776555 78999999998754
No 19
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.87 E-value=0.68 Score=35.47 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=31.6
Q ss_pred CCCCCC--hhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHhhhcCCC
Q 020105 4 VGGVGA--SMRLSVELQTKTSLPHLLTTPQCCKQKYRDLERRFNDDP 48 (331)
Q Consensus 4 rHGt~~--WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~rRfs~~~ 48 (331)
+||+.. |..||.-|..| |+..|+.||..|-+.|...+
T Consensus 50 ~~G~~~~tw~~Ia~~L~~R--------s~~qvr~Rf~~Lm~lf~~~~ 88 (95)
T d1ug2a_ 50 EQGAQPHTFSVISQQLGNK--------TPVEVSHRFRELMQLFHTAC 88 (95)
T ss_dssp HTTSCTTTHHHHHHHHSSC--------CHHHHHHHHHHHHHHHHHCS
T ss_pred HcCCcHHHHHHHHHHcCCC--------CHHHHHHHHHHHHHHHHHhh
Confidence 477543 99999999888 57999999999999998765
No 20
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.13 E-value=0.98 Score=31.55 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=25.1
Q ss_pred CCCC-hhhHHHHHhhcCCCCCCCCChHhHHHhHHHHHhhhc
Q 020105 6 GVGA-SMRLSVELQTKTSLPHLLTTPQCCKQKYRDLERRFN 45 (331)
Q Consensus 6 Gt~~-WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~dL~rRfs 45 (331)
||.+ |+.||..| .| |+..|..||..|+.=+.
T Consensus 22 gt~~RW~~IA~~v-gk--------t~~ev~~~~k~l~e~~~ 53 (59)
T d2cqqa1 22 GTPGRWEKIAHEL-GR--------SVTDVTTKAKQLKDSVT 53 (59)
T ss_dssp TCTTHHHHHHHHH-TS--------CHHHHHHHHHHHHHSCC
T ss_pred CCcHHHHHHHHHH-CC--------CHHHHHHHHHHHHHhcc
Confidence 4444 99999999 55 68999999999986554
No 21
>d1zrja1 a.140.2.1 (A:1-37) Heterogeneous nuclear ribonucleoprotein U-like protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.79 E-value=0.72 Score=29.50 Aligned_cols=32 Identities=34% Similarity=0.598 Sum_probs=24.2
Q ss_pred HhHhhHHHHHHHHhhhhhhhHHHHH-HHHHHHH
Q 020105 66 LRKVRVDELKRELQRCDLSILSLQL-QVKKLEE 97 (331)
Q Consensus 66 LRklRVAELrrever~d~sIgsLq~-kvk~L~e 97 (331)
|.+++|+|||.+++...+.+.=.-. =|+||++
T Consensus 3 ~~~m~V~eLK~~Lk~rgL~~sG~Ka~Li~RL~~ 35 (37)
T d1zrja1 3 VRRLKVNELREELQRRGLDTRGLKAELAERLQA 35 (37)
T ss_dssp GGGSCHHHHHHHHHHTTCCCCSCHHHHHHHHHH
T ss_pred hHHCcHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Confidence 6789999999999998887754433 4566654
No 22
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.80 E-value=0.75 Score=34.21 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=27.0
Q ss_pred CCCCCC-----ChhhHHHHHhhcCCCCCCCCChHhHHHhHH-HHHhhhcC
Q 020105 3 NVGGVG-----ASMRLSVELQTKTSLPHLLTTPQCCKQKYR-DLERRFND 46 (331)
Q Consensus 3 ~rHGt~-----~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~-dL~rRfs~ 46 (331)
..||+. .|..||.-|-.| |+..|+.||+ .|..+...
T Consensus 17 ~~~g~~~~~~~~W~~IA~~lpgR--------t~~qcr~Rw~~~L~p~l~~ 58 (86)
T d1igna1 17 RKNPTRRTTHTLYDEISHYVPNH--------TGNSIRHRFRVYLSKRLEY 58 (86)
T ss_dssp HTSGGGTTCSHHHHHHTTTSTTS--------CHHHHHHHHHHTTGGGCCC
T ss_pred HHhCcCcCCccCHHHHHHHcCCC--------CHHHHHHHHHHHcCccccC
Confidence 467776 499999777665 7899999998 46666543
No 23
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.61 E-value=1.5 Score=31.78 Aligned_cols=28 Identities=18% Similarity=0.433 Sum_probs=24.4
Q ss_pred CCCCCChhhHHHHHhhcCCCCCCCCChHhHHHhHHH
Q 020105 4 VGGVGASMRLSVELQTKTSLPHLLTTPQCCKQKYRD 39 (331)
Q Consensus 4 rHGt~~WdsVA~Evq~Rs~~~~~~~Tp~~Cr~Ky~d 39 (331)
.|--+=|.-|||=|=+| |+..|..||..
T Consensus 28 kh~~gfW~~VA~~VGtR--------SaeECQ~ky~~ 55 (73)
T d1wgxa_ 28 KHKPGFWSEVAAAVGSR--------SPEECQRKYME 55 (73)
T ss_dssp SSSSSHHHHHHHHTTTS--------CHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHccC--------CHHHHHHHHHh
Confidence 47778899999999999 58999999964
No 24
>d2do1a1 a.140.2.1 (A:5-46) Nuclear protein hcc-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.27 E-value=3.8 Score=26.37 Aligned_cols=29 Identities=34% Similarity=0.402 Sum_probs=21.6
Q ss_pred HHhHhhHHHHHHHHhhhhh--------hhHHHHHHHH
Q 020105 65 HLRKVRVDELKRELQRCDL--------SILSLQLQVK 93 (331)
Q Consensus 65 ELRklRVAELrrever~d~--------sIgsLq~kvk 93 (331)
||-||.+||||.|-+...+ -|+-||.-++
T Consensus 2 el~klklaelkqec~argl~~kgnk~dli~rlqayle 38 (42)
T d2do1a1 2 ELHKLKLAELKQECLARGLETKGIKQDLIHRLQAYLE 38 (42)
T ss_dssp CTTTSCHHHHHHHHHHHTCCCCSCHHHHHHHHHHHHH
T ss_pred chhHhHHHHHHHHHHHccccccCcHHHHHHHHHHHHH
Confidence 5789999999999887554 3666766543
No 25
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.73 E-value=30 Score=24.28 Aligned_cols=23 Identities=35% Similarity=0.570 Sum_probs=19.2
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHH
Q 020105 71 VDELKRELQRCDLSILSLQLQVK 93 (331)
Q Consensus 71 VAELrrever~d~sIgsLq~kvk 93 (331)
|-..-+||++|-.+|--||.+|-
T Consensus 28 V~diE~eLerCk~~irrLeqel~ 50 (67)
T d1k1fa_ 28 VGDIEQELERAKASIRRLEQEVN 50 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHH
Confidence 45566899999999999998774
No 26
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.80 E-value=20 Score=23.82 Aligned_cols=30 Identities=13% Similarity=0.002 Sum_probs=23.1
Q ss_pred CCCCCChhhHHHH-HhhcCCCCCCCCChHhHHHhHHHHHh
Q 020105 4 VGGVGASMRLSVE-LQTKTSLPHLLTTPQCCKQKYRDLER 42 (331)
Q Consensus 4 rHGt~~WdsVA~E-vq~Rs~~~~~~~Tp~~Cr~Ky~dL~r 42 (331)
.||. +|..||.+ |.+| |+..|..-|-.-++
T Consensus 18 ~yGK-df~~I~~~~v~~K--------s~~~~v~fYY~~Kk 48 (57)
T d2crga1 18 KYGK-DFNDIRQDFLPWK--------SLTSIIEYYYMWKT 48 (57)
T ss_dssp HTCS-CHHHHHHTTCSSS--------CHHHHHHHHHHHHT
T ss_pred HHcc-cHHHHHHHHcCCC--------CHHHHHHHHHHHhC
Confidence 4777 99999986 4666 67999998876554
No 27
>d1h1js_ a.140.2.1 (S:) S/mar DNA-binding protein Tho1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.39 E-value=22 Score=22.96 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=25.7
Q ss_pred HhHhhHHHHHHHHhhhhhhhHHHHH-HHHHHHHh
Q 020105 66 LRKVRVDELKRELQRCDLSILSLQL-QVKKLEEE 98 (331)
Q Consensus 66 LRklRVAELrrever~d~sIgsLq~-kvk~L~ee 98 (331)
+.++-|+|||.++...-+.+.=... -|+||++.
T Consensus 5 y~~ltv~eLK~~lk~rgL~~sG~Ka~Li~RL~~~ 38 (44)
T d1h1js_ 5 YSSLTVVQLKDLLTKRNLSVGGLKNELVQRLIKD 38 (44)
T ss_dssp GGGCCHHHHHHHHHHTTCCCCSSHHHHHHHHHHH
T ss_pred HHHCcHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Confidence 5688999999999999988754443 56777764
Done!