Your job contains 1 sequence.
>020107
MDVAHCELDGNADAVEFCPQDSYHHVLAASTYTLQEGDKPSRNGSISLFNVNAEEKNLEL
LYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSI
TVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIR
ESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLG
GGVWRIKHHPFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSL
EGKRKNSLVATCSFYDRLLRIWMPESDCLTR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020107
(331 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2166315 - symbol:AT5G63010 "AT5G63010" species... 1156 2.3e-117 1
MGI|MGI:1914478 - symbol:Wdr85 "WD repeat domain 85" spec... 358 1.4e-51 3
RGD|1304868 - symbol:RGD1304868 "similar to RIKEN cDNA 28... 363 2.2e-51 3
UNIPROTKB|F1MY10 - symbol:Bt.18449 "Uncharacterized prote... 359 3.7e-46 3
UNIPROTKB|Q9BTV6 - symbol:WDR85 "WD repeat-containing pro... 371 9.5e-46 3
DICTYBASE|DDB_G0270178 - symbol:wdr85 "WD40 repeat-contai... 403 3.7e-44 2
ZFIN|ZDB-GENE-070410-57 - symbol:wdr85 "WD repeat domain ... 410 1.6e-43 2
UNIPROTKB|F1NSA3 - symbol:WDR85 "Uncharacterized protein"... 387 1.8e-42 2
POMBASE|SPCC18.15 - symbol:rrt2 "WD repeat protein, invol... 345 2.0e-31 1
CGD|CAL0005473 - symbol:orf19.2191 species:5476 "Candida ... 293 6.6e-26 1
UNIPROTKB|Q5A2L4 - symbol:CaO19.2191 "Putative uncharacte... 293 6.6e-26 1
SGD|S000000450 - symbol:RRT2 "Protein required for last s... 250 3.4e-21 1
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 178 1.2e-10 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 164 9.8e-10 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 164 1.0e-09 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 164 1.0e-09 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 163 1.3e-09 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 162 1.6e-09 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 161 2.1e-09 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 157 6.3e-09 1
ASPGD|ASPL0000037329 - symbol:AN3018 species:162425 "Emer... 157 8.9e-09 2
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 150 4.0e-08 1
ASPGD|ASPL0000077901 - symbol:AN4648 species:162425 "Emer... 146 3.4e-07 1
TAIR|locus:2123929 - symbol:VIP3 "AT4G29830" species:3702... 132 4.9e-06 1
UNIPROTKB|A8XEN7 - symbol:wdr-23 "DDB1- and CUL4-associat... 135 6.0e-06 1
WB|WBGene00008419 - symbol:wdr-23 species:6239 "Caenorhab... 132 1.4e-05 1
UNIPROTKB|P90794 - symbol:wdr-23 "DDB1- and CUL4-associat... 132 1.4e-05 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 125 3.0e-05 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 132 4.1e-05 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 124 7.4e-05 1
DICTYBASE|DDB_G0288453 - symbol:DDB_G0288453 "E3 ubiquiti... 127 9.7e-05 1
DICTYBASE|DDB_G0291832 - symbol:wdr23 "WD40 repeat-contai... 125 9.9e-05 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 121 0.00020 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 119 0.00033 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 119 0.00034 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 119 0.00035 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 111 0.00035 2
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 121 0.00037 2
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 118 0.00039 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 118 0.00043 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 118 0.00043 1
UNIPROTKB|Q8TED0 - symbol:UTP15 "U3 small nucleolar RNA-a... 115 0.00046 2
UNIPROTKB|A7MB12 - symbol:UTP15 "U3 small nucleolar RNA-a... 115 0.00046 2
UNIPROTKB|H0Y8P4 - symbol:UTP15 "U3 small nucleolar RNA-a... 115 0.00053 2
RGD|1304773 - symbol:Rfwd2 "ring finger and WD repeat dom... 116 0.00054 1
UNIPROTKB|F1NUL8 - symbol:WDR77 "Uncharacterized protein"... 114 0.00062 1
ASPGD|ASPL0000074293 - symbol:AN4800 species:162425 "Emer... 117 0.00076 1
UNIPROTKB|H0Y339 - symbol:RFWD2 "E3 ubiquitin-protein lig... 116 0.00080 1
RGD|1310992 - symbol:Utp15 "UTP15, U3 small nucleolar rib... 113 0.00080 2
DICTYBASE|DDB_G0275073 - symbol:pwp1 "periodic tryptophan... 116 0.00080 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 117 0.00085 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 113 0.00085 1
UNIPROTKB|B4DXK8 - symbol:UTP15 "cDNA FLJ57656, highly si... 115 0.00086 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 114 0.00096 1
>TAIR|locus:2166315 [details] [associations]
symbol:AT5G63010 "AT5G63010" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0080008 EMBL:AB009051
UniGene:At.49209 UniGene:At.68259 OMA:DTEYSAD HOGENOM:HOG000240907
UniGene:At.43098 IPI:IPI00522354 RefSeq:NP_201106.1
ProteinModelPortal:Q9FM51 SMR:Q9FM51 PRIDE:Q9FM51
EnsemblPlants:AT5G63010.1 GeneID:836421 KEGG:ath:AT5G63010
TAIR:At5g63010 InParanoid:Q9FM51 PhylomeDB:Q9FM51
ProtClustDB:CLSN2687531 Genevestigator:Q9FM51 Uniprot:Q9FM51
Length = 343
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 221/347 (63%), Positives = 270/347 (77%)
Query: 1 MDVAHCELDGNADAVEFCPQDSYHHVLAASTYTLQEGDKPSRNGSISLFNV-NAEEKNLE 59
MD A C L+GNADAVEFCP +SY ++LAASTYTLQEGD PSR+GS+ LF+V + E+ L
Sbjct: 1 MDAADCYLEGNADAVEFCPHESYANLLAASTYTLQEGDCPSRSGSVYLFDVGDVEDVGLN 60
Query: 60 LLYRMDTAGIFDIKWSPVGGNAGPF-LAQADADG-------------GLLRDITGEKISS 105
L+ ++DTAG+FDI+WS GG+ G LAQADADG G LR+++G++ISS
Sbjct: 61 LIQKIDTAGVFDIRWSR-GGDGGDVALAQADADGCLIVYKIDETESKGTLREVSGKRISS 119
Query: 106 SMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMV 165
SMCLCL+W+PS+TSI VGLSDGS S+VS +S LE +Q+WK H+FELW SFD++ P++V
Sbjct: 120 SMCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLV 179
Query: 166 YTGSDDCKFSGWDIRESPF-KLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWD 224
YTGSDDCKFS WDIR+SP FQNSK+H MGVCCI+S PSD ++ TGSYDE LRVWD
Sbjct: 180 YTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
Query: 225 VRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKH 284
RS+S+P+NETSV LGGGVWRIKHHP + G+VLAACMHNGFA+ KV K EVLE+Y KH
Sbjct: 240 TRSVSRPLNETSVSLGGGVWRIKHHPSLSGVVLAACMHNGFALAKVSDGKGEVLESYNKH 299
Query: 285 GSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCLTR 331
SLAYGADW RG+ +K S+VATCSFYDRLLR+WMP +D TR
Sbjct: 300 HSLAYGADWYRGKD-----QKQSVVATCSFYDRLLRVWMPITDFSTR 341
>MGI|MGI:1914478 [details] [associations]
symbol:Wdr85 "WD repeat domain 85" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914478 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017183 EMBL:AL732585 eggNOG:NOG317327
OMA:DTEYSAD CTD:92715 HOGENOM:HOG000240907 HOVERGEN:HBG080322
OrthoDB:EOG4F7NJV EMBL:AK013297 EMBL:AK078448 EMBL:AK087998
EMBL:BC086486 IPI:IPI00112046 IPI:IPI00608030 RefSeq:NP_080320.1
UniGene:Mm.389248 ProteinModelPortal:Q9CYU6 SMR:Q9CYU6
PhosphoSite:Q9CYU6 PRIDE:Q9CYU6 Ensembl:ENSMUST00000028351
GeneID:67228 KEGG:mmu:67228 UCSC:uc008ipq.2 UCSC:uc008ips.2
GeneTree:ENSGT00390000018644 InParanoid:Q9CYU6 ChiTaRS:WDR85
NextBio:323946 Bgee:Q9CYU6 CleanEx:MM_WDR85 Genevestigator:Q9CYU6
GermOnline:ENSMUSG00000026975 Uniprot:Q9CYU6
Length = 477
Score = 358 (131.1 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 77/176 (43%), Positives = 105/176 (59%)
Query: 125 SDGSVSIVSVVE--SQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRES 182
S G + ++ V E ++L+++ W AH FE W +F+ Q +VY+G DDC GWD R
Sbjct: 168 SKGQLHLLMVNEGTAELQLVASWPAHHFEAWIAAFNYWQTELVYSGGDDCLLRGWDTRML 227
Query: 183 PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGG 242
+ F SK H MGVC I S P + L TGSYDE++ +WD R+I +P+ + V GG
Sbjct: 228 GTPV-F-TSKRHCMGVCSIQSSPHQEHILATGSYDEHVLLWDTRNIRQPLADVPV--QGG 283
Query: 243 VWRIKHHPFIPGLVLAACMHNGFAVV---KVGGEKAE--VLETYAKHGSLAYGADW 293
VWR+K HP L+LAACMHNGF ++ K EK + VL ++ SL YGADW
Sbjct: 284 VWRLKWHPVHHHLLLAACMHNGFKILNCQKAIEEKQDITVLTSHEMPNSLVYGADW 339
Score = 130 (50.8 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 12 ADAVEFCPQDSYHHVLAASTYTLQ--------EGDKPS-RNGSISLFNVNAEEKNLELL- 61
AD+VE+CP + Y H+LA TY L+ +G +P R G + LF+ + LL
Sbjct: 21 ADSVEWCPVEGYQHLLACGTYQLRAPRDQPALDGSEPQVRLGRLYLFSFSEHNTAKPLLE 80
Query: 62 -YRMDTAGIFDIKWS--PVGGNAGPFLAQADADGGLLRDITGEKISSSM--CLCLEWNPS 116
R D++ + D+KW PV G+ LA A GLLR + E S ++ L + +
Sbjct: 81 VQRRDSSAVLDMKWCHIPVSGHVLLGLANASGSIGLLRLMECENNSYTLQPISSLALDEN 140
Query: 117 ATSITVGLSDGSVSIVSVVESQLEVL 142
S+++ S G V E L+++
Sbjct: 141 CLSLSMDWSTGKS--VRAREQPLKII 164
Score = 76 (31.8 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 306 NSLVATCSFYDRLLRIWMPESD 327
NSL+ATCSFYD +L +W E++
Sbjct: 438 NSLLATCSFYDHVLHLWKWETN 459
>RGD|1304868 [details] [associations]
symbol:RGD1304868 "similar to RIKEN cDNA 2810443J12"
species:10116 "Rattus norvegicus" [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304868 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017183 OMA:DTEYSAD OrthoDB:EOG4F7NJV
GeneTree:ENSGT00390000018644 IPI:IPI00558829
Ensembl:ENSRNOT00000046898 Uniprot:D4A1S8
Length = 463
Score = 363 (132.8 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 77/176 (43%), Positives = 105/176 (59%)
Query: 125 SDGSVSIVSVVE--SQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRES 182
S G + ++ + E +QL++L W AH FE W +F+ Q +VY+G DDC GWD R
Sbjct: 168 SKGQLHLLLLSEGAAQLQLLASWPAHHFEAWIAAFNYWQTELVYSGGDDCLLRGWDTRML 227
Query: 183 PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGG 242
K F SK H MGVC I S P + L TGSYDE++ +WD R++ +P+ + V GG
Sbjct: 228 G-KPVF-TSKRHSMGVCSIQSSPHREHILATGSYDEHVLLWDTRNVRQPLADVPV--QGG 283
Query: 243 VWRIKHHPFIPGLVLAACMHNGFAVV---KVGGEKAE--VLETYAKHGSLAYGADW 293
VWR++ HP L+LAACMHNGF ++ K EK + VL ++ SL YGADW
Sbjct: 284 VWRLRWHPVHHHLLLAACMHNGFKILNCQKAIEEKQDITVLTSHTMPNSLVYGADW 339
Score = 128 (50.1 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 46/146 (31%), Positives = 72/146 (49%)
Query: 12 ADAVEFCPQDSYHHVLAASTYTLQ--------EGDKPS-RNGSISLFNVNAEEKNLELL- 61
AD+VE+CP + H+LA TY L+ +G +P R G + LF+ + + LL
Sbjct: 21 ADSVEWCPVEGCQHLLACGTYQLRAPKDQPAPDGSEPQVRLGRLYLFSFSEDNTAKPLLE 80
Query: 62 -YRMDTAGIFDIKWS--PVGGNAGPFLAQADADGGLLRDITGEKISSSMCLC--LEWNPS 116
R D++ + D+KW PV G+ LA A LLR + EK S ++ L L + S
Sbjct: 81 VQRRDSSAVLDMKWCHIPVSGHVLLGLANASGSVELLRLMECEKNSYTLQLISSLALDES 140
Query: 117 ATSITVGLSDGSVSIVSVVESQLEVL 142
S+++ S G V E L+++
Sbjct: 141 CLSLSLDWSTGKS--VRAREQPLKII 164
Score = 71 (30.1 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 306 NSLVATCSFYDRLLRIWMPES 326
+SL+ATCSFYD +L +W E+
Sbjct: 440 SSLLATCSFYDHVLHLWKLET 460
>UNIPROTKB|F1MY10 [details] [associations]
symbol:Bt.18449 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017183 "peptidyl-diphthamide biosynthetic process from
peptidyl-histidine" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0017183 OMA:DTEYSAD
GeneTree:ENSGT00390000018644 EMBL:DAAA02032391 IPI:IPI00717550
Ensembl:ENSBTAT00000016098 Uniprot:F1MY10
Length = 454
Score = 359 (131.4 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 73/175 (41%), Positives = 103/175 (58%)
Query: 125 SDGSVSIVSVVESQ--LEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRES 182
S G + ++ ++E+ L+ + W+AH+FE W +F+ Q +VY+G DD GWD R
Sbjct: 164 SKGQLHLLKILEAGPGLQAVVTWRAHQFEAWVAAFNYWQTEVVYSGGDDGLLKGWDTR-M 222
Query: 183 PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGG 242
P AF +S+ H MGVC I S P N L TGSYDE++ +WD RS+ +P+ + V GG
Sbjct: 223 PDTAAF-SSRRHSMGVCSIQSSPHRENILATGSYDEHVLLWDTRSLRQPLADVPV--QGG 279
Query: 243 VWRIKHHPFIPGLVLAACMHNGFAVVK----VGGEKAEVLETYAKHGSLAYGADW 293
VWR+K HPF L+LAACMH GF ++ GE+ + + SL YG DW
Sbjct: 280 VWRLKWHPFQRDLLLAACMHGGFKIINYQMAAEGEQEAISLSCPLPNSLVYGIDW 334
Score = 87 (35.7 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 34 LQEGDKPSRNGSISLFNVNAEEKNLELL--YRMDTAGIFDIKWS--PVGGNAGPFLAQAD 89
L + P R G + L++ N + L+ R DT+ I D+KW PV G+ P L AD
Sbjct: 49 LDVDEPPIRLGRLYLYSWNEDRSPCPLVEVQRRDTSAILDMKWCHVPVAGH--PLLGVAD 106
Query: 90 ADGG--LLRDITGEKI-SSSMCLCLEWNPSATSITVGLSDGSVSIVS 133
A G LLR + E + C L ++++ S G S
Sbjct: 107 ASGSIELLRLLPSEDTWTLQPCSRLALEKQCLALSLDWSTGKAGRAS 153
Score = 66 (28.3 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 307 SLVATCSFYDRLLRIWMPES 326
+L+ATCSFY+R+L +W E+
Sbjct: 434 NLLATCSFYNRVLHLWKWEN 453
Score = 64 (27.6 bits), Expect = 9.1e-44, Sum P(3) = 9.1e-44
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 7 ELDGNADAVEFCPQDSYHHVLAASTYTL-QEGDKPSRNGSISLFNVNAEEKNLELLY 62
+ + D+VE+CP H+LA TY L + D P+ S +V+ L LY
Sbjct: 6 DTEHTVDSVEWCPLAGCRHLLACGTYQLWKPEDWPADGECQSELDVDEPPIRLGRLY 62
>UNIPROTKB|Q9BTV6 [details] [associations]
symbol:WDR85 "WD repeat-containing protein 85" species:9606
"Homo sapiens" [GO:0017183 "peptidyl-diphthamide biosynthetic
process from peptidyl-histidine" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0017183 EMBL:AL365502
eggNOG:NOG317327 OMA:DTEYSAD EMBL:AK075115 EMBL:BC003123
EMBL:BC017335 IPI:IPI00030511 RefSeq:NP_620133.1 UniGene:Hs.292570
ProteinModelPortal:Q9BTV6 PhosphoSite:Q9BTV6 DMDM:68565266
PaxDb:Q9BTV6 PRIDE:Q9BTV6 DNASU:92715 Ensembl:ENST00000277540
GeneID:92715 KEGG:hsa:92715 UCSC:uc004cnk.1 CTD:92715
GeneCards:GC09M140449 HGNC:HGNC:25199 HPA:HPA022911 MIM:613210
neXtProt:NX_Q9BTV6 PharmGKB:PA134942088 HOGENOM:HOG000240907
HOVERGEN:HBG080322 InParanoid:Q9BTV6 OrthoDB:EOG4F7NJV
PhylomeDB:Q9BTV6 GenomeRNAi:92715 NextBio:77853 Bgee:Q9BTV6
CleanEx:HS_WDR85 Genevestigator:Q9BTV6 GermOnline:ENSG00000148399
Uniprot:Q9BTV6
Length = 452
Score = 371 (135.7 bits), Expect = 9.5e-46, Sum P(3) = 9.5e-46
Identities = 84/202 (41%), Positives = 118/202 (58%)
Query: 107 MCLCLEWNPSATS------ITVGLSD--GSVSIVSVVESQ--LEVLQQWKAHEFELWATS 156
+ L L+W+ T + + SD G + ++ V E++ L+ + W+AH+FE W +
Sbjct: 143 LALSLDWSTGKTGRAGDQPLKIISSDSTGQLHLLMVNETRPRLQKVASWQAHQFEAWIAA 202
Query: 157 FDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSY 216
F+ P +VY+G DD GWD R P K F SK H MGVC I S P + L TGSY
Sbjct: 203 FNYWHPEIVYSGGDDGLLRGWDTRV-PGKFLF-TSKRHTMGVCSIQSSPHREHILATGSY 260
Query: 217 DEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVV---KVGGE 273
DE++ +WD R++ +P+ +T V GGVWRIK HPF L+LAACMH+GF ++ K E
Sbjct: 261 DEHILLWDTRNMKQPLADTPV--QGGVWRIKWHPFHHHLLLAACMHSGFKILNCQKAMEE 318
Query: 274 KAE--VLETYAKHGSLAYGADW 293
+ E VL ++ SL YGADW
Sbjct: 319 RQEATVLTSHTLPDSLVYGADW 340
Score = 81 (33.6 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 49 FNVNAEEKNLELLYRMDTAGIFDIKWS--PVGGNAGPFLAQADADGG--LLRDITGEK-- 102
FN N L + R DT+ I D+KW PV G+A L ADA G LLR + EK
Sbjct: 71 FNDNNSIHPLVEVQRKDTSAILDMKWCHIPVAGHA--LLGLADASGSIQLLRLVESEKSH 128
Query: 103 ----ISS----SMCLCLEWNPSATSITVGLSDGSVSIVSVVES-QLEVLQQWKAHEFELW 153
+SS CL L + S T T D + I+S + QL +L +
Sbjct: 129 VLEPLSSLALEEQCLALSLDWS-TGKTGRAGDQPLKIISSDSTGQLHLLMVNETRPRLQK 187
Query: 154 ATSFDVHQ 161
S+ HQ
Sbjct: 188 VASWQAHQ 195
Score = 71 (30.1 bits), Expect = 9.5e-46, Sum P(3) = 9.5e-46
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 12 ADAVEFCPQDSYHHVLAASTYTLQEG-DKPS 41
AD+VE+CP H+LA TY L+ D+P+
Sbjct: 16 ADSVEWCPLQGCRHLLACGTYQLRRPEDRPA 46
Score = 66 (28.3 bits), Expect = 9.5e-46, Sum P(3) = 9.5e-46
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 307 SLVATCSFYDRLLRIW 322
SL+ATCSFYD L +W
Sbjct: 432 SLLATCSFYDHALHLW 447
>DICTYBASE|DDB_G0270178 [details] [associations]
symbol:wdr85 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0270178 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
RefSeq:XP_646601.1 ProteinModelPortal:Q55C80
EnsemblProtists:DDB0267165 GeneID:8617573 KEGG:ddi:DDB_G0270178
eggNOG:NOG317327 OMA:DTEYSAD ProtClustDB:CLSZ2431444 Uniprot:Q55C80
Length = 367
Score = 403 (146.9 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 84/248 (33%), Positives = 134/248 (54%)
Query: 95 LRDITGEKISSS-MCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQ--WKAHEFE 151
L+ T +S+ + L L+WN S + SDG++ + V + +V ++ WKAH++E
Sbjct: 125 LKSSTEISLSNDILSLSLDWNKSGDKLICSFSDGNIGLFKVTKDYSKVTEEKRWKAHDYE 184
Query: 152 LWATSFDVHQPHMVYTGSDDCKFSGWDIRE----SPFKLAFQNS-KIHK---MGVCCIAS 203
W +F+ H +V++G DDCKF WD+ + + + + K K MGV I
Sbjct: 185 AWICAFNYHDESIVFSGGDDCKFKIWDLNQLLNHNDDDIGIPPTPKFTKRCDMGVTSIHC 244
Query: 204 IPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHN 263
P+ N + GSYDE LR+WD++S+ +P+ T LGGG+WRIK HPF ++ ACM
Sbjct: 245 HPTIENLIAVGSYDECLRIWDLKSLKQPIITTD-SLGGGIWRIKWHPFQKNKLVTACMGG 303
Query: 264 GFAVVKVGGEKA------EVLETY-AKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYD 316
GF ++ E ++ ++Y H S+AYG DW +++ + + CSFYD
Sbjct: 304 GFHILSTDPENINDFSTLQIEQSYNGPHKSIAYGVDWSFNKNNFD----KQFIGCCSFYD 359
Query: 317 RLLRIWMP 324
+ L IW+P
Sbjct: 360 KCLSIWIP 367
Score = 79 (32.9 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 8 LDGNADAVEFCPQDSYHHVLAASTYTLQEGD---KPSRNGSISLFNVNAEEKNLE 59
LD +D+VEF P ++ ++ TY +++GD K R G + LF + E++ E
Sbjct: 11 LDYTSDSVEFYPFNN--NIFVCGTYEIEKGDTEYKERRKGKLYLFEIEEEQQQKE 63
>ZFIN|ZDB-GENE-070410-57 [details] [associations]
symbol:wdr85 "WD repeat domain 85" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-070410-57
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:NOG317327 OMA:DTEYSAD CTD:92715
HOGENOM:HOG000240907 HOVERGEN:HBG080322 OrthoDB:EOG4F7NJV
GeneTree:ENSGT00390000018644 EMBL:BX855605 EMBL:BC133930
IPI:IPI00482001 RefSeq:NP_001076308.1 UniGene:Dr.82410
Ensembl:ENSDART00000089339 GeneID:564032 KEGG:dre:564032
InParanoid:A3KNN6 NextBio:20885191 Uniprot:A3KNN6
Length = 443
Score = 410 (149.4 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 89/214 (41%), Positives = 128/214 (59%)
Query: 93 GLLRDITGEKISSSMCLCLEWNPS---ATSITVGLSD--GSVSIVSVVESQLEVLQQWKA 147
GL +++ + + L L+W+ ++ + V SD GS++++S+ E+ L + QWKA
Sbjct: 128 GLECELSTDLGPDRLALSLDWSTGRGESSDVRVVSSDSTGSLTLLSLGEADLTAVCQWKA 187
Query: 148 HEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSD 207
HE+E W ++F VY+G DD K GWD+R F SK H MGVC I S P
Sbjct: 188 HEYEAWISAFSYWDTQTVYSGGDDSKLKGWDLRMGCSSPTF-TSKRHTMGVCSIHSNPHR 246
Query: 208 SNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAV 267
+ L TGSYDE + +WD R++ +P++ET+V GGGVWR+K HP L+LAACMHN F +
Sbjct: 247 EHILATGSYDENVLLWDGRNMKQPLSETAV--GGGVWRLKWHPSQEHLLLAACMHNDFQI 304
Query: 268 V----KVGGEKAE--VLETYAKHGSLAYGADWQR 295
+ + G++ VL +Y H SLAYGADW R
Sbjct: 305 LYCQKALEGQETPCPVLGSYILHNSLAYGADWSR 338
Score = 145 (56.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 52/145 (35%), Positives = 70/145 (48%)
Query: 12 ADAVEFCPQDSYHHVLAASTYT-LQEGDK---------PSRNGSISLFNVNAEEKNLELL 61
AD VE+CP + HVLA TY L EGD PSR G + LF+ N + + L
Sbjct: 19 ADTVEWCPIPQWAHVLACGTYQQLLEGDDKQRTEGSAAPSRIGRLYLFDCNPQSSFIPPL 78
Query: 62 ---YRMDTAGIFDIKWSPVGGNAGPFLAQADADGG--LLRDITGEKISSSM-C-LCLEWN 114
R+DTA I D+KW V + P L A A G L + I ++ SS + C L +
Sbjct: 79 TESQRIDTAAILDLKWCHVPISERPLLGMATASGEIQLYKLIEAQQGSSGLECELSTDLG 138
Query: 115 PSATSITVGLSDG--SVSIVSVVES 137
P ++++ S G S V VV S
Sbjct: 139 PDRLALSLDWSTGRGESSDVRVVSS 163
Score = 66 (28.3 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 308 LVATCSFYDRLLRIW 322
L+ATCSFYD ++ +W
Sbjct: 416 LIATCSFYDHMMHVW 430
>UNIPROTKB|F1NSA3 [details] [associations]
symbol:WDR85 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017183 "peptidyl-diphthamide biosynthetic process from
peptidyl-histidine" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0017183
GeneTree:ENSGT00390000018644 EMBL:AADN02026927 IPI:IPI00580082
Ensembl:ENSGALT00000014239 OMA:YESPTAT Uniprot:F1NSA3
Length = 376
Score = 387 (141.3 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 78/179 (43%), Positives = 108/179 (60%)
Query: 125 SDGSVSIVSVVES--QLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRES 182
S+G +++ S+ ES + VL QW+AH+FE W +F+ +VY+G DD GWD R +
Sbjct: 74 SEGKLNLFSIDESAPSVHVLNQWEAHKFEAWIAAFNYWNIDIVYSGGDDSLLKGWDTRCN 133
Query: 183 PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGG 242
P F S+ H MGVC I P N L TGSYDE++ +WD R++ +P+ +T V GG
Sbjct: 134 PETPVF-TSRRHSMGVCSIQCSPHRENLLATGSYDEHVLLWDTRNMKQPLADTHV--EGG 190
Query: 243 VWRIKHHPFIPGLVLAACMHNGFAVVKVGGEKAE------VLETYAKHGSLAYGADWQR 295
VWR+K HP ++LAACM +GF ++ G AE +L +Y H SLAYGADW R
Sbjct: 191 VWRLKWHPTCDFVLLAACMQSGFKILDCRGSMAENTEECVILSSYVLHNSLAYGADWSR 249
Score = 79 (32.9 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 296 GRSSLEGKRKNSLVATCSFYDRLLRIW 322
G S + + S+VATCSFYD +L IW
Sbjct: 345 GVKSSDSPKATSIVATCSFYDNILHIW 371
>POMBASE|SPCC18.15 [details] [associations]
symbol:rrt2 "WD repeat protein, involved in diphthamide
biosynthesis (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0017183
"peptidyl-diphthamide biosynthetic process from peptidyl-histidine"
evidence=ISO] [GO:0032456 "endocytic recycling" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC18.15 GO:GO:0005829
GO:GO:0005634 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CU329672 GO:GO:0032456 GO:GO:0017183
eggNOG:NOG317327 PIR:T41158 RefSeq:NP_588394.2
EnsemblFungi:SPCC18.15.1 GeneID:2539212 OrthoDB:EOG4643MZ
NextBio:20800382 Uniprot:O74865
Length = 326
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 96/331 (29%), Positives = 161/331 (48%)
Query: 9 DGNADAVEFCPQDSYHHVLAASTYTLQEGDKPSRNGSISLFNVNAEEKNLELLYRMDTAG 68
D AD ++ + VL TY L E K R+G + L++ +E L+ ++ M
Sbjct: 15 DWPADVCKY--SQVFEDVLVVGTYMLDESTK-LRHGKLVLYDT--KEDVLKRVFDMHCDA 69
Query: 69 IFDIKWSPVGGNAGPFLAQADADGGL----------LRDITGEKI--SSSMCLCLEWNPS 116
I D KWSP + LA A + G + L + G K+ SS + L L+++ S
Sbjct: 70 ILDFKWSPHDASV---LAVAHSTGHVSFYRHQFRAELMFLRGIKVADSSVLMLSLDFSDS 126
Query: 117 ATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSG 176
+ V +S+GSV I+ + +S + + +WK H++E W + +++Y+G DD
Sbjct: 127 GKELAVSMSNGSVLIIDI-DSGV-IKNKWKEHDYEAWTCHYSRQDNNLLYSGGDDAALVC 184
Query: 177 WDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETS 236
+D R P +++ ++H GV I S + TG Y +++ D R+I KP+ S
Sbjct: 185 YDQR-IPNSCIWRDIQVHHSGVVSILSRAPFGPYIATGEYGDFMHTLDTRNIGKPL--FS 241
Query: 237 VCLGGGVWRIKHHPFIPGL--VLAACMHNGFAVVKVGGEKAEV---LETYAKHGSLAYGA 291
LGGGVWR++H VL MH G V+++ + + + + +H S+ YG
Sbjct: 242 ANLGGGVWRLEHMETTENYHKVLGILMHRGAQVLRISNDFSSIDASKRIFKEHESMCYGG 301
Query: 292 DWQRGRSSLEGKRKNSLVATCSFYDRLLRIW 322
DW + + L+ATCSFYD+ + +W
Sbjct: 302 DW---------RHTDGLLATCSFYDKRVCLW 323
>CGD|CAL0005473 [details] [associations]
symbol:orf19.2191 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=IEA]
[GO:0032456 "endocytic recycling" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005473 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AACQ01000076
EMBL:AACQ01000075 eggNOG:NOG317327 RefSeq:XP_715973.1
RefSeq:XP_716031.1 ProteinModelPortal:Q5A2L4 GeneID:3642294
GeneID:3642395 KEGG:cal:CaO19.2191 KEGG:cal:CaO19.9737
Uniprot:Q5A2L4
Length = 345
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 99/342 (28%), Positives = 160/342 (46%)
Query: 19 PQDSYHHVLAASTYTLQEGDKPSRNGSISLFNVNAEEKNLELLYRMDTAG-IFDIKWSP- 76
PQD+ + TY L+ D SR+GS+ ++ + L L+ T G I DIK++P
Sbjct: 26 PQDTSK--IFIGTYKLE--DDGSRHGSLDYYSFL--DNKLSLISSTATLGAILDIKFNPS 79
Query: 77 -----VGGNAGPFLAQADADGGLLRDITGEKI-SSSMCLCLEWNPSATS----ITVGLSD 126
V ++ L D L + ++ + +NP+ S I + ++
Sbjct: 80 DPQMLVSAHSNGHLLIWKFDNNTLELSHDANVHEDTLITSIFFNPNKDSNGSVILLTFTN 139
Query: 127 GSVSIVSVVESQLEVLQQWKAHEFELWATSF-DVHQ-PHMVYTGSDDCKFSGWDIRESPF 184
G + + + +++ HE E W SF ++ Q ++VYTG DD + D+R
Sbjct: 140 GYSGLFDLEKLEIDYFDT--CHELECWTGSFGEIGQLSNVVYTGGDDSQLIAHDLRTKQQ 197
Query: 185 KLAFQNSKIHKMGVCCIASIPSDS------NTLLTGSYDEYLRVWDVRSISK-------- 230
+ H G+ I S P+D+ NTL TGSYD+ LRVWD+R I K
Sbjct: 198 IWTLRRG--HDAGIVSILS-PNDNWNKTSPNTLWTGSYDDNLRVWDLRVIDKSNPSLISG 254
Query: 231 --PVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAK-HGSL 287
P + LGGGVWR+ P + +L+ CM++G ++ + V + + H S+
Sbjct: 255 YIPKIISQENLGGGVWRLIPSP-VDNRLLSCCMYDGARIIDANSDSFTVTRYFKQDHQSM 313
Query: 288 AYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCL 329
YG DW S +GK +ATCSFYD ++++W P+ C+
Sbjct: 314 CYGGDW-----SSDGK----FIATCSFYDNVVQVWSPDQ-CV 345
>UNIPROTKB|Q5A2L4 [details] [associations]
symbol:CaO19.2191 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005473 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AACQ01000076
EMBL:AACQ01000075 eggNOG:NOG317327 RefSeq:XP_715973.1
RefSeq:XP_716031.1 ProteinModelPortal:Q5A2L4 GeneID:3642294
GeneID:3642395 KEGG:cal:CaO19.2191 KEGG:cal:CaO19.9737
Uniprot:Q5A2L4
Length = 345
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 99/342 (28%), Positives = 160/342 (46%)
Query: 19 PQDSYHHVLAASTYTLQEGDKPSRNGSISLFNVNAEEKNLELLYRMDTAG-IFDIKWSP- 76
PQD+ + TY L+ D SR+GS+ ++ + L L+ T G I DIK++P
Sbjct: 26 PQDTSK--IFIGTYKLE--DDGSRHGSLDYYSFL--DNKLSLISSTATLGAILDIKFNPS 79
Query: 77 -----VGGNAGPFLAQADADGGLLRDITGEKI-SSSMCLCLEWNPSATS----ITVGLSD 126
V ++ L D L + ++ + +NP+ S I + ++
Sbjct: 80 DPQMLVSAHSNGHLLIWKFDNNTLELSHDANVHEDTLITSIFFNPNKDSNGSVILLTFTN 139
Query: 127 GSVSIVSVVESQLEVLQQWKAHEFELWATSF-DVHQ-PHMVYTGSDDCKFSGWDIRESPF 184
G + + + +++ HE E W SF ++ Q ++VYTG DD + D+R
Sbjct: 140 GYSGLFDLEKLEIDYFDT--CHELECWTGSFGEIGQLSNVVYTGGDDSQLIAHDLRTKQQ 197
Query: 185 KLAFQNSKIHKMGVCCIASIPSDS------NTLLTGSYDEYLRVWDVRSISK-------- 230
+ H G+ I S P+D+ NTL TGSYD+ LRVWD+R I K
Sbjct: 198 IWTLRRG--HDAGIVSILS-PNDNWNKTSPNTLWTGSYDDNLRVWDLRVIDKSNPSLISG 254
Query: 231 --PVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAK-HGSL 287
P + LGGGVWR+ P + +L+ CM++G ++ + V + + H S+
Sbjct: 255 YIPKIISQENLGGGVWRLIPSP-VDNRLLSCCMYDGARIIDANSDSFTVTRYFKQDHQSM 313
Query: 288 AYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCL 329
YG DW S +GK +ATCSFYD ++++W P+ C+
Sbjct: 314 CYGGDW-----SSDGK----FIATCSFYDNVVQVWSPDQ-CV 345
>SGD|S000000450 [details] [associations]
symbol:RRT2 "Protein required for last step of diphthamide
biosynthesis" species:4932 "Saccharomyces cerevisiae" [GO:0017183
"peptidyl-diphthamide biosynthetic process from peptidyl-histidine"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA;IDA] [GO:0032456
"endocytic recycling" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SGD:S000000450
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005768
EMBL:BK006936 GO:GO:0032456 GO:GO:0017183
GeneTree:ENSGT00390000018644 OrthoDB:EOG4643MZ EMBL:Z36115
EMBL:AY692624 PIR:S46123 RefSeq:NP_009805.1
ProteinModelPortal:P38332 SMR:P38332 DIP:DIP-4948N IntAct:P38332
MINT:MINT-502261 STRING:P38332 PaxDb:P38332 EnsemblFungi:YBR246W
GeneID:852548 KEGG:sce:YBR246W CYGD:YBR246w eggNOG:KOG0280
OMA:HESMCYG NextBio:971631 Genevestigator:P38332 GermOnline:YBR246W
Uniprot:P38332
Length = 387
Score = 250 (93.1 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 74/207 (35%), Positives = 100/207 (48%)
Query: 146 KAHEFELWATSFDVHQPH--MVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCI-A 202
K HE E W F QP +V+TG DD + D+R F + N++IH GV I
Sbjct: 194 KPHELECWTAEFGSLQPFQDVVFTGGDDSRIMAHDLRSKEF--IWSNNRIHDAGVVSIKC 251
Query: 203 SIPSDSN----TLLTGSYDEYLRVWDVRSISK---P------VNETSVCLGGGVWRI--- 246
S P+ N +++TGSYD+ +R D+R + + P VN+ + LGGGVWR
Sbjct: 252 SQPNFRNNKPTSIITGSYDDNIRSLDLRMMGESIFPGANVPTVNKLACDLGGGVWRFVES 311
Query: 247 ------KHHPFIPGLVLAACMHNGFAVVKVGGEKAEV--LETYAK--HGSLAYGADWQRG 296
HH L L CM+NG VV + E ++ Y K H S+ YG DW
Sbjct: 312 PIDQEQSHHNGSDRL-LVCCMYNGAKVVTMNDNSDEYFQIQHYLKKGHDSMCYGGDWS-- 368
Query: 297 RSSLEGKRKNSLVATCSFYDRLLRIWM 323
NSL+ATCSFYD L+ W+
Sbjct: 369 ---------NSLIATCSFYDNSLQTWI 386
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 101 EKISSSMCLCLEWNPSATSITVGLSD--GSVSIVSVVESQLEVLQQWKAHEFELWATSFD 158
E + S CL WN + + SD G V++ V Q L +++ HE W+ F
Sbjct: 416 EMSTRSKLSCLSWNKHEKN-HIASSDYEGIVTVWDVTTRQS--LMEYEEHEKRAWSVDFS 472
Query: 159 VHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDE 218
+P M+ +GSDDCK W R+ + N + K +CC+ P SN + GS D
Sbjct: 473 RTEPSMLVSGSDDCKVKVWCTRQEASVI---NIDM-KANICCVKYNPGSSNYIAVGSADH 528
Query: 219 YLRVWDVRSISKPVN 233
++ +D+R+IS+P++
Sbjct: 529 HIHYYDLRNISQPLH 543
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 164 (62.8 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 82/300 (27%), Positives = 127/300 (42%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGE 101
G++++ N E + LL D G+FD+ WS N L + DG L + DI
Sbjct: 44 GTLAVLEQN--ETGIVLLRSFDWNDGLFDVTWSE---NNEHVLITSSGDGSLQIWDIAKP 98
Query: 102 KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL---------EVLQQWKAHEFEL 152
K + + E A S+ + G +VS Q + L+ +K HE +
Sbjct: 99 K--GPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVI 156
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ +L H+ + D N L+
Sbjct: 157 YSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLVIP---AHQAEILSCDWCKYDENLLV 213
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKV 270
TG+ D L+ WD+R++ +PV + LG V R+K PF L LA+C ++ F V
Sbjct: 214 TGAVDCSLKGWDLRNVRQPV---FILLGHTYAVRRVKFSPFHATL-LASCSYD-FTVRFW 268
Query: 271 GGEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCL 329
K +LET H G D SL K V C+ +D L++I+ P CL
Sbjct: 269 DFSKPNPLLETVEHHTEFTCGLDL-----SLH---KCGQVVDCA-WDELVKIYTPS--CL 317
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 79/301 (26%), Positives = 129/301 (42%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDI--- 98
GS +L ++ E L L D G+FD+ WS N L DG L L D
Sbjct: 44 GSGTLLILDQNESGLRLFRSFDWNDGLFDVTWSE---NNEHVLVTCSGDGSLQLWDTARA 100
Query: 99 TGE----KISSSMCLCLEWNPSATS--ITVGLSDGSVSIVSVVESQLEVLQQWKAHEFEL 152
TG K + ++W+ + + G D +V + + L ++ HE +
Sbjct: 101 TGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKS--LCTFRGHESVI 158
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N ++
Sbjct: 159 YSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIVVP---AHQAEILSCDWCKYNENLVV 215
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 216 TGAVDCSLRGWDLRNVQQPVFEL---LGHTYAIRRVKFSPFHAS-VLASCSYD-FTVRFW 270
Query: 271 GGEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCL 329
K + +LET H G D SL+ + VA C+ +D ++I+ P CL
Sbjct: 271 NFSKPDPLLETVEHHTEFTCGLDL-----SLQSPTQ---VADCA-WDETIKIYDPV--CL 319
Query: 330 T 330
T
Sbjct: 320 T 320
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 80/301 (26%), Positives = 128/301 (42%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGE 101
G +L ++ +E L L D G+FD+ WS N L DG L L D
Sbjct: 44 GCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSE---NNEHVLITCSGDGSLQLWDTA-- 98
Query: 102 KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL---------EVLQQWKAHEFEL 152
K + + + E S+ + G +VS Q + L ++ HE +
Sbjct: 99 KAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESII 158
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N L+
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIP---AHQAEILSCDWCKYNENLLV 215
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 216 TGAVDCSLRGWDLRNVRQPVFEL---LGHTYAIRRVKFSPFHAS-VLASCSYD-FTVRFW 270
Query: 271 GGEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCL 329
K + +LET H G D+ SL+ + VA CS +D ++I+ P CL
Sbjct: 271 NFSKPDSLLETVEHHTEFTCGLDF-----SLQSPTQ---VADCS-WDETIKIYDPA--CL 319
Query: 330 T 330
T
Sbjct: 320 T 320
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 79/301 (26%), Positives = 128/301 (42%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDI--- 98
G +L ++ E L L D G+FD+ WS N L DG L L D
Sbjct: 44 GCGTLLILDQNESGLRLFRSFDWNDGLFDVTWSE---NNEHILVTCSGDGSLQLWDTAKA 100
Query: 99 TGE----KISSSMCLCLEWNPSATS--ITVGLSDGSVSIVSVVESQLEVLQQWKAHEFEL 152
TG K + ++W+ + + G D +V + + L ++ HE +
Sbjct: 101 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKS--LCTFRGHESVI 158
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N L+
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRIVVP---AHQAEILSCDWCKYNENLLV 215
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 216 TGAVDCSLRGWDLRNVRQPVFEL---LGHTYAIRRVKFSPFHAS-VLASCSYD-FTVRFW 270
Query: 271 GGEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCL 329
K + +LET H G D SL+ + VA C+ +D ++I+ P CL
Sbjct: 271 NFSKPDPLLETVEHHTEFTCGLDL-----SLQSPTQ---VADCA-WDETIKIYDPV--CL 319
Query: 330 T 330
T
Sbjct: 320 T 320
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 162 (62.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 79/300 (26%), Positives = 129/300 (43%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDI--- 98
G +L ++ E L++ D G+FD+ WS N L DG L L D
Sbjct: 39 GCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSE---NNEHVLVTCSGDGSLQLWDTAKA 95
Query: 99 TGE----KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL-EVLQQWKAHEFELW 153
TG K + ++W+ + V +S V V + + L ++ HE ++
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRGEQLV-VSGSWDQTVKVWDPTVGNSLCTFRGHESVIY 154
Query: 154 ATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLT 213
+T + H P + S D WD++ + ++ H+ + + N ++T
Sbjct: 155 STIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIP---AHQTEILSCDWCKYNENLVVT 211
Query: 214 GSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKVG 271
G+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 212 GAVDCSLRGWDLRNVRQPVFEL---LGHTYAIRRVKFSPFHAS-VLASCSYD-FTVRFWN 266
Query: 272 GEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCLT 330
K + +LET H G D SL+ + VA CS +D ++I+ P CLT
Sbjct: 267 FSKPDPLLETVEHHTEFTCGLDL-----SLQSPTQ---VADCS-WDETIKIYDPV--CLT 315
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 161 (61.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 77/294 (26%), Positives = 126/294 (42%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDI--- 98
G +L ++ E L++ D G+FD+ WS N L DG L L D
Sbjct: 39 GCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSE---NNEHVLVTCSGDGSLQLWDTAKA 95
Query: 99 TGE----KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL-EVLQQWKAHEFELW 153
TG K + ++W+ + V +S V V + + L ++ HE ++
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRDEQLV-VSGSWDQTVKVWDPTVGNSLCTFRGHESVIY 154
Query: 154 ATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLT 213
+T + H P + S D WD++ + ++ H+ + + N L+T
Sbjct: 155 STIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIP---AHQAEILSCDWCKYNENLLVT 211
Query: 214 GSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKVG 271
G+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 212 GAVDCSLRGWDLRNVRQPVFEL---LGHTYAIRRVKFSPFHAS-VLASCSYD-FTVRFWN 266
Query: 272 GEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMP 324
K + +LET H G D SL+ + VA CS +D ++I+ P
Sbjct: 267 FSKPDPLLETVEHHTEFTCGLDL-----SLQSPTE---VADCS-WDETVKIYNP 311
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 157 (60.3 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 77/300 (25%), Positives = 130/300 (43%)
Query: 44 GSISLFNVNAEEKNLELLYRMDTA-GIFDIKWSPVGGNAGPFLAQADADGGL-LRDI--- 98
G +L ++ + L++ D + G+FD+ WS + L DG L L D
Sbjct: 39 GCGTLIILDQNQSGLQIFRSFDWSDGLFDVTWSEDNEHV---LVTCSGDGSLQLWDTAKA 95
Query: 99 TGE----KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL-EVLQQWKAHEFELW 153
TG K + ++W+ + V +S V V + + L ++ HE ++
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRGEQLV-VSGSWDQTVKVWDPTVGNSLCTFRGHESVIY 154
Query: 154 ATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLT 213
+T + H P + S D WD++ + ++ H+ + + N ++T
Sbjct: 155 STIWSPHIPGCFASASGDQTLRIWDVKTAGVRIVIP---AHQTEILSCDWCKYNENLVVT 211
Query: 214 GSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKVG 271
G+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 212 GAVDCSLRGWDLRNVRQPVFEL---LGHTYAIRRVKFSPFHAS-VLASCSYD-FTVRFWN 266
Query: 272 GEKAE-VLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCLT 330
K + +LET H G D SL+ + VA CS +D ++I+ P CLT
Sbjct: 267 FSKPDPLLETVEHHTEFTCGLDL-----SLQSPTE---VADCS-WDETIKIYDPV--CLT 315
>ASPGD|ASPL0000037329 [details] [associations]
symbol:AN3018 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001306
EMBL:AACD01000051 RefSeq:XP_660622.1 EnsemblFungi:CADANIAT00010061
GeneID:2873715 KEGG:ani:AN3018.2 eggNOG:NOG305327
HOGENOM:HOG000196009 OMA:CMHAGTR OrthoDB:EOG46QB1X Uniprot:Q5B8W2
Length = 414
Score = 157 (60.3 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 49/128 (38%), Positives = 66/128 (51%)
Query: 211 LLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIK---HHPFIPG-----LVLAACMH 262
LLTGSYDE+LRV+ + + L GGVWR++ H LVLA+CMH
Sbjct: 291 LLTGSYDEHLRVYHACRGGRGEVLAEMGLRGGVWRLQLLSAHSSTSKEEWTFLVLASCMH 350
Query: 263 NGFAVVKVG--GE-KA--EVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDR 317
G +VKV GE KA E+L + +H S+ Y +D +G G V + SFYDR
Sbjct: 351 GGTRIVKVTVPGEGKAVIEILAEFTEHESMNYASDTWKG-----GPGPEIRVVSSSFYDR 405
Query: 318 LLRIWMPE 325
+ +W E
Sbjct: 406 RVCVWRVE 413
Score = 40 (19.1 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 110 CLEWNP-SATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELW 153
CL++ P S + VG S + + + E +QQ K+ +LW
Sbjct: 19 CLQFCPASPNNFVVGTYLLSETKTTDTDGS-ETIQQSKSGSLQLW 62
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 150 (57.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/263 (25%), Positives = 108/263 (41%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGE 101
G +L ++ E L + D T +FD+ WS N L DG L L D G
Sbjct: 44 GCGTLLILDHNESGLRIFRSFDWTDALFDVTWSE---NNEHVLVTCSGDGSLQLWDTAGA 100
Query: 102 -------KISSSMCLCLEWNPSATS--ITVGLSDGSVSIVSVVESQLEVLQQWKAHEFEL 152
K + ++W+ + + G D +V + + L +K HE +
Sbjct: 101 AGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGRS--LCTFKGHESII 158
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N L+
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVVP---AHQAEILSCDWCKYNENLLV 215
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E LG + R+K PF VLA+C ++ F V
Sbjct: 216 TGAVDCSLRGWDLRNVRQPVFEL---LGHTYAIRRVKFSPFYAS-VLASCSYD-FTVRFW 270
Query: 271 GGEKAE-VLETYAKHGSLAYGAD 292
K +LET H G D
Sbjct: 271 NFSKPNPLLETVEHHTEFTCGLD 293
>ASPGD|ASPL0000077901 [details] [associations]
symbol:AN4648 species:162425 "Emericella nidulans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 GO:GO:0030529 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK
RefSeq:XP_662252.1 ProteinModelPortal:Q5B482 STRING:Q5B482
EnsemblFungi:CADANIAT00005783 GeneID:2872446 KEGG:ani:AN4648.2
OrthoDB:EOG4T4H3P Uniprot:Q5B482
Length = 541
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 115 PSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKF 174
P + G G++ + V +L+ WK H+ +W F P V + SDD
Sbjct: 106 PDGRILVAGDDTGTLQVFDV--GSRAILKTWKDHKQPVWVAKFSPSDPTCVLSASDDRTV 163
Query: 175 SGWDI-RESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVN 233
WD+ E+ K +S + S+ S S +L++GSYD +R+WD R + +
Sbjct: 164 RLWDLPSENSIKSFVGHSDYVRTAAFMPGSLAS-SGSLVSGSYDRTVRLWDPRMEGR--S 220
Query: 234 ETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVK-VGGEKAEVLETYAKH-GSLAYGA 291
+ +G + + P G + A N AV+ V G+ +++++ K SL+ +
Sbjct: 221 AMTFKMGAPLETVL--PMPTGTTVLAAADNKIAVLDIVAGKPLHMIQSHQKTVTSLSLAS 278
Query: 292 DWQRGRS-SLEGKRK 305
D R S +L+G K
Sbjct: 279 DGTRLLSGALDGHLK 293
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 101 EKISSS-MCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDV 159
+K SS L + W+P+ + G DG++ + V S+L L Q + H + + F
Sbjct: 153 DKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKL--LHQLEGHNMPVRSLVFSP 210
Query: 160 HQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEY 219
P ++++GSDD + + ++ K + H V + + P D + TGS D
Sbjct: 211 VDPRVLFSGSDDGHVN---MHDAEGKTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRT 266
Query: 220 LRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPG 254
+R+WD++ + +T VW + P PG
Sbjct: 267 VRLWDLKM--RAAIQTMSNHNDQVWSVAFRP--PG 297
>UNIPROTKB|A8XEN7 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0008340 "determination
of adult lifespan" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:HE601540 ProteinModelPortal:A8XEN7
STRING:A8XEN7 EnsemblMetazoa:CBG11954 WormBase:CBG11954
Uniprot:A8XEN7
Length = 554
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 43/165 (26%), Positives = 71/165 (43%)
Query: 97 DITGEKISSSMC--LCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWA 154
D GE + C C+ ++ + I G S+ S+ + V E + + AHE ++ +
Sbjct: 237 DWHGEHAVQNQCAVFCVRFSDDSEQIVCGTSEYSIHVFDV-EQRRRIRTIVNAHEDDVNS 295
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIR--ESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
F + +++Y+ DD WD R + H+ GV + S D LL
Sbjct: 296 VCFADYGSNLIYSAGDDGLVKVWDKRAWSDGDVIPVGVFAGHRDGVTYVDS-RQDERYLL 354
Query: 213 TGSYDEYLRVWDVRSISKP--VNETSVCLGGGVWRIKHHPFIPGL 255
+ S D+ ++VWD+R S V T C+ W + P PGL
Sbjct: 355 SNSKDQTIKVWDLRKFSCQGGVEATRACVQSQHWDYRWQPAPPGL 399
>WB|WBGene00008419 [details] [associations]
symbol:wdr-23 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0080135 "regulation of
cellular response to stress" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122 KO:K11801
InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906 PIR:T20359
PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 97 DITGEKISSSMC--LCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWA 154
D+ GE C C++++ S+ I G S S+ + V E + + AHE ++ +
Sbjct: 259 DLNGEP-GRDHCAVFCVKFSDSSEQIVCGTSQYSIHVFDV-EQRRRIRTIVNAHEDDVNS 316
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCC-----IASIPS--D 207
F +++Y+ DD WD K A+ + + +GV + + S D
Sbjct: 317 VCFADLGSNLIYSAGDDGLVKVWD------KRAWSDGDVEPVGVFAGHRDGVTHVDSRQD 370
Query: 208 SNTLLTGSYDEYLRVWDVRSISKP--VNETSVCLGGGVWRIKHHPFIPGL 255
LL+ S D+ ++VWD+R S V T C+ W + P PGL
Sbjct: 371 ERYLLSNSKDQTIKVWDLRKFSNMSGVEATRACVQSQHWDYRWQPAPPGL 420
>UNIPROTKB|P90794 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906
PIR:T20359 PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 97 DITGEKISSSMC--LCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWA 154
D+ GE C C++++ S+ I G S S+ + V E + + AHE ++ +
Sbjct: 259 DLNGEP-GRDHCAVFCVKFSDSSEQIVCGTSQYSIHVFDV-EQRRRIRTIVNAHEDDVNS 316
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCC-----IASIPS--D 207
F +++Y+ DD WD K A+ + + +GV + + S D
Sbjct: 317 VCFADLGSNLIYSAGDDGLVKVWD------KRAWSDGDVEPVGVFAGHRDGVTHVDSRQD 370
Query: 208 SNTLLTGSYDEYLRVWDVRSISKP--VNETSVCLGGGVWRIKHHPFIPGL 255
LL+ S D+ ++VWD+R S V T C+ W + P PGL
Sbjct: 371 ERYLLSNSKDQTIKVWDLRKFSNMSGVEATRACVQSQHWDYRWQPAPPGL 420
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 63/284 (22%), Positives = 120/284 (42%)
Query: 55 EKNLELLYRMDTA-GIFDIKWSP-----VGGNAGP-----FLAQADADGGLLRDITGEKI 103
++++ DT G++D WS V ++G + QA + G R I +
Sbjct: 46 DRDIGAFKTFDTRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGG---RPIKSFEE 102
Query: 104 SSSMCLCLEWN--PSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQ 161
+ ++WN T IT G D S+ I + + L+ ++ H + +++ +
Sbjct: 103 HTKEVYSVDWNLVTKDTFIT-GSWDQSIKIWNPRMDRS--LKTFREHRYCIYSAIWSPRN 159
Query: 162 PHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLR 221
H+ + S D WD R++ + K H + + ++TGS D+ +R
Sbjct: 160 AHLFASVSGDRTLKIWDSRDNR---SLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIR 216
Query: 222 VWDVRSISKPVNETSVCLGG--GVWRIKHHPFIPGLVLAACMHNGFAVV-KVGGEKAEVL 278
+WD+R +P T++ G V RIK P + LA+C ++ +V E+ ++
Sbjct: 217 IWDIRYPDRP---TTILRGHTYAVRRIKCSPHSESM-LASCSYDMSVIVWDRAREQDPII 272
Query: 279 ETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIW 322
H G DW ++G+ +A+CS +D + +W
Sbjct: 273 ARMDHHTEFVVGLDWNM---FIDGQ-----MASCS-WDEQVCVW 307
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 132 (51.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 55/234 (23%), Positives = 102/234 (43%)
Query: 90 ADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHE 149
A G LL+ + G S + ++P + SD ++ + + +L+ Q +K H+
Sbjct: 948 ATGELLQTLEGH---SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQ--QTFKGHD 1002
Query: 150 FELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSN 209
+ A +F H+V +GSDD WD+ S + + ++ H V +A P D
Sbjct: 1003 LWIRAVAFSPDGKHLV-SGSDDNTIKLWDLATSELQQSLED---HSRSVHAVAFSPDDKQ 1058
Query: 210 TLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVK 269
L + S D +++WD S + + T GV + P G +LA+ ++G +K
Sbjct: 1059 -LASSSLDSTIKLWD--SATGELQRTLEGHSQGVRSVTFSP--DGKLLASNSYDG--TIK 1111
Query: 270 VGGEKAEVLETYAKHGSLAYGADWQRGRS-SLEGKRKNSLVATCSFYDRLLRIW 322
+ L+ +L +DW + S +GK+ S +YD +++W
Sbjct: 1112 LWNPLTGELQQ-----TLTGRSDWVDSVAFSPDGKQLAS-----GYYDSTIKLW 1155
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 44/184 (23%), Positives = 79/184 (42%)
Query: 98 ITGEKISSSMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLE--VLQQWKAHEFELWA 154
+TG K S L W+P+ T + S DGS+ + + + V KAHE ++
Sbjct: 271 LTGHKKSVED---LAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNV 327
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTG 214
S++ H+ +++ +G DD + W ++ F K H + + P ++ T +
Sbjct: 328 ISWNRHE-NLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMAS 386
Query: 215 SYDEYLRVWDVRSISK--------PVNETSVCLGGG-VWRIKHHPFIPGLVLAACMHNGF 265
D+ +WD+ + + P V +G V + H IPGL + + +GF
Sbjct: 387 GEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINTSI-DGF 445
Query: 266 AVVK 269
V K
Sbjct: 446 NVFK 449
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 33/133 (24%), Positives = 56/133 (42%)
Query: 101 EKISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL-EVLQQWKAHEFELWATSFDV 159
E S CL WN S + SD I+S+ ++ + + + HE +W+ F
Sbjct: 711 EMTCRSKISCLSWNTYIKS-QIASSDYE-GIISLWDANTGQNIMTLEEHEKRVWSVDFSR 768
Query: 160 HQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEY 219
P + +GSDD + W ++ K +CC+ P SN + GS D +
Sbjct: 769 TDPTQLASGSDDTRVKLWSTTTERAITTIES----KANICCVKFNPCSSNLIAFGSADHH 824
Query: 220 LRVWDVRSISKPV 232
+ +D+R P+
Sbjct: 825 IHYYDLRQYKDPL 837
>DICTYBASE|DDB_G0291832 [details] [associations]
symbol:wdr23 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291832 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AAFI02000185 KO:K11801
RefSeq:XP_629959.1 ProteinModelPortal:Q54E28
EnsemblProtists:DDB0237531 GeneID:8628365 KEGG:ddi:DDB_G0291832
InParanoid:Q54E28 OMA:NIRISQH ProtClustDB:CLSZ2429513
Uniprot:Q54E28
Length = 661
Score = 125 (49.1 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/165 (25%), Positives = 77/165 (46%)
Query: 111 LEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSD 170
L+++P+ I G S+G + I+ +E + +V+ ++ H ++ + + H ++ TGSD
Sbjct: 388 LKFSPNNKEILCGCSNGEI-IIYDLEGR-QVVNHFRGHGRDVNSVCYLDHTGNIFVTGSD 445
Query: 171 DCKFSGWDIRE-----SPFKLAFQNSKI-----HKMGVCCIASIPSDSNTLLTGSYDEYL 220
D WD R S N + H G+ + S D +L+ S D+
Sbjct: 446 DSLIRVWDKRSLDKSGSGSGSGDSNKPVGTFTGHYQGLTHVCS-KDDGTYVLSNSKDQTA 504
Query: 221 RVWDVRSISKPVNETSVCLGGGV-WRIKHHPFIPGLVLAACMHNG 264
++WD+R +S P TS GGV W +++ + V+ + NG
Sbjct: 505 KLWDIRKMSNP---TSKPPSGGVNWDYRYYSYPSDYVMPNPLRNG 546
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 64/256 (25%), Positives = 103/256 (40%)
Query: 71 DIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVS 130
D+ + + L D+D + DI G + + + W+PS + D S
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVA-DIEGHTVRVARVM---WHPSGRFLGTTCYDRSWR 347
Query: 131 IVSVVESQLEVLQQWKAHEFELWATSFDVHQP-HMVYTGSDDCKFSGWDIRESPFKLAFQ 189
+ + E+Q E+L Q + H ++ +F HQ + TG D WD+R + +
Sbjct: 348 LWDL-EAQEEILHQ-EGHSMGVYDIAF--HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 190 NSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHH 249
H + I+ P+ + + TGS D +VWD+R + T V +K
Sbjct: 404 G---HLKEIYGISFSPNGYH-IATGSGDNTCKVWDLRQ--RRCVYTIPAHQNLVTGVKFE 457
Query: 250 PFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLV 309
P +L N + G L+T A H G D S +G+ L+
Sbjct: 458 PIHGDFLLTGAYDNTAKIWTHPGWSP--LKTLAGHEGKVMGLD-----ISSDGQ----LI 506
Query: 310 ATCSFYDRLLRIWMPE 325
ATCS YDR ++WM E
Sbjct: 507 ATCS-YDRTFKLWMAE 521
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 64/256 (25%), Positives = 102/256 (39%)
Query: 71 DIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVS 130
D+ + + L D+D + DI G + + + W+PS + D S
Sbjct: 293 DVNLASCAADGSVKLWSLDSDEPVA-DIEGHTVRVARVM---WHPSGRFLGTTCYDRSWR 348
Query: 131 IVSVVESQLEVLQQWKAHEFELWATSFDVHQP-HMVYTGSDDCKFSGWDIRESPFKLAFQ 189
+ + E+Q E+L Q + H ++ +F HQ + TG D WD+R + +
Sbjct: 349 LWDL-EAQEEILHQ-EGHSMGVYDIAF--HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 404
Query: 190 NSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHH 249
H + I P+ + + TGS D +VWD+R + T V +K
Sbjct: 405 G---HLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQ--RRCVYTIPAHQNLVTGVKFE 458
Query: 250 PFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLV 309
P +L N + G L+T A H G D S +G+ L+
Sbjct: 459 PIHGNFLLTGAYDNTAKIWTHPGWSP--LKTLAGHEGKVMGLD-----ISSDGQ----LI 507
Query: 310 ATCSFYDRLLRIWMPE 325
ATCS YDR ++WM E
Sbjct: 508 ATCS-YDRTFKLWMAE 522
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 64/256 (25%), Positives = 102/256 (39%)
Query: 71 DIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVS 130
D+ + + L D+D + DI G + + + W+PS + D S
Sbjct: 308 DVNLASCAADGSVKLWSLDSDEPVA-DIEGHTVRVARVM---WHPSGRFLGTTCYDRSWR 363
Query: 131 IVSVVESQLEVLQQWKAHEFELWATSFDVHQP-HMVYTGSDDCKFSGWDIRESPFKLAFQ 189
+ + E+Q E+L Q + H ++ +F HQ + TG D WD+R + +
Sbjct: 364 LWDL-EAQEEILHQ-EGHSMGVYDIAF--HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 419
Query: 190 NSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHH 249
H + I P+ + + TGS D +VWD+R + T V +K
Sbjct: 420 G---HLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQ--RRCVYTIPAHQNLVTGVKFE 473
Query: 250 PFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLV 309
P +L N + G L+T A H G D S +G+ L+
Sbjct: 474 PIHGNFLLTGAYDNTAKIWTHPGWSP--LKTLAGHEGKVMGLD-----ISSDGQ----LI 522
Query: 310 ATCSFYDRLLRIWMPE 325
ATCS YDR ++WM E
Sbjct: 523 ATCS-YDRTFKLWMAE 537
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 64/256 (25%), Positives = 102/256 (39%)
Query: 71 DIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVS 130
D+ + + L D+D + DI G + + + W+PS + D S
Sbjct: 310 DVNLASCAADGSVKLWSLDSDEPVA-DIEGHTVRVARVM---WHPSGRFLGTTCYDRSWR 365
Query: 131 IVSVVESQLEVLQQWKAHEFELWATSFDVHQP-HMVYTGSDDCKFSGWDIRESPFKLAFQ 189
+ + E+Q E+L Q + H ++ +F HQ + TG D WD+R + +
Sbjct: 366 LWDL-EAQEEILHQ-EGHSMGVYDIAF--HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 421
Query: 190 NSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHH 249
H + I P+ + + TGS D +VWD+R + T V +K
Sbjct: 422 G---HLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQ--RRCVYTIPAHQNLVTGVKFE 475
Query: 250 PFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLV 309
P +L N + G L+T A H G D S +G+ L+
Sbjct: 476 PIHGNFLLTGAYDNTAKIWTHPGWSP--LKTLAGHEGKVMGLD-----ISSDGQ----LI 524
Query: 310 ATCSFYDRLLRIWMPE 325
ATCS YDR ++WM E
Sbjct: 525 ATCS-YDRTFKLWMAE 539
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 111 (44.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/127 (22%), Positives = 63/127 (49%)
Query: 111 LEWNPSATSITVGLS-DGSVSIVSVVESQLE--VLQQWKAHEFELWATSFDVHQPHMVYT 167
L+W+P+ S+ S D ++ I S + +L AH+ ++ S++ ++P + +
Sbjct: 275 LQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEP-FIAS 333
Query: 168 GSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRS 227
G DD WD+R+ K K H + + P+++ L +G D+ + +WD+ +
Sbjct: 334 GGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDL-A 392
Query: 228 ISKPVNE 234
+ K +++
Sbjct: 393 VEKDIDQ 399
Score = 48 (22.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 249 HPFIPGLVLAACMHNGFAVVK 269
HP +PG++L+ H+GF + +
Sbjct: 433 HPQLPGVLLSTA-HSGFNIFR 452
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 121 (47.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 48/169 (28%), Positives = 76/169 (44%)
Query: 165 VYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWD 224
+ T S+D + WD+ ES K H GV I SI SD + L TGS D +R+WD
Sbjct: 402 ITTSSNDKSWRLWDL-ESGGKCLLDQEG-HSDGVMGI-SIQSDGSLLATGSQDGLVRIWD 458
Query: 225 VRSISKPVNETSVCLGGGVWRIKHHPFIP-GLVLAACMHNGFAVVKVGGEKAEVLETYAK 283
+RS +P+ + G ++ + P G LA+ + V+ +K + + A
Sbjct: 459 LRS-GRPI----LYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQILA- 512
Query: 284 HGSLAYGADWQRGRSSLEGKRKNS------LVATCSFYDRLLRIWMPES 326
H S+ +Q+ + NS +ATCSF D ++ W P +
Sbjct: 513 HNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSF-DGKIKTWSPNT 560
Score = 40 (19.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 128 SVSIVSVVESQLEVLQQWKAHEFEL 152
++SI S+ +SQ +L K E EL
Sbjct: 155 NISIYSLKKSQQRLLHLKKQREIEL 179
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 44/189 (23%), Positives = 80/189 (42%)
Query: 56 KNLELLYRMDTAGIFDIKWSPV--------GGNAGP-FLAQADADGGLLRDITGEKISSS 106
K L L RM + + + WSP+ G N G ++ GG + D + +S
Sbjct: 246 KPLSTL-RMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRGHAS 304
Query: 107 MCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMV 165
L+W+P+ ++ S DG+V + V K ++ ++ H++
Sbjct: 305 SVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSKQTSHLL 364
Query: 166 YTGSDDCKFSGWDIRE---SPFKLA------FQNSKIHKMGVCCIASIPSDSNTLLTGSY 216
TG+DD +++ WD+R +P A + HK + I P+D + + GS
Sbjct: 365 ATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSA 424
Query: 217 DEYLRVWDV 225
D + +WD+
Sbjct: 425 DNTVTLWDL 433
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 64/256 (25%), Positives = 102/256 (39%)
Query: 71 DIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVS 130
D+ + + L D+D + DI G + + + W+PS + D S
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVA-DIEGHTVRVAR---VTWHPSGRFLGTTCYDRSWR 347
Query: 131 IVSVVESQLEVLQQWKAHEFELWATSFDVHQP-HMVYTGSDDCKFSGWDIRESPFKLAFQ 189
+ + E+Q E+L Q + H ++ +F HQ + TG D WD+R + +
Sbjct: 348 LWDL-EAQEEILHQ-EGHSMGVYDIAF--HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 190 NSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHH 249
H + I P+ + + TGS D +VWD+R + T V +K
Sbjct: 404 G---HLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQ--RRCVYTIPAHQNLVTGVKFE 457
Query: 250 PFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLV 309
P +L N + G L+T A H G D S +G+ L+
Sbjct: 458 PIHGNFLLTGAYDNTAKIWTHPGWSP--LKTLAGHEGKVMGLD-----ISSDGQ----LI 506
Query: 310 ATCSFYDRLLRIWMPE 325
ATCS YDR ++WM E
Sbjct: 507 ATCS-YDRTFKLWMAE 521
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 64/256 (25%), Positives = 102/256 (39%)
Query: 71 DIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVS 130
D+ + + L D+D + DI G + + + W+PS + D S
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVA-DIEGHTVRVARVM---WHPSGRFLGTTCYDRSWR 347
Query: 131 IVSVVESQLEVLQQWKAHEFELWATSFDVHQP-HMVYTGSDDCKFSGWDIRESPFKLAFQ 189
+ + E+Q E+L Q + H ++ +F HQ + TG D WD+R + +
Sbjct: 348 LWDL-EAQEEILHQ-EGHSMGVYDIAF--HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 190 NSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHH 249
H + I P+ + + TGS D +VWD+R + T V +K
Sbjct: 404 G---HLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQ--RRCVYTIPAHQNLVTGVKFE 457
Query: 250 PFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLV 309
P +L N + G L+T A H G D S +G+ L+
Sbjct: 458 PIHGDFLLTGAYDNTAKIWTHPGWSP--LKTLAGHEGKVMGLD-----ISSDGQ----LI 506
Query: 310 ATCSFYDRLLRIWMPE 325
ATCS YDR ++WM E
Sbjct: 507 ATCS-YDRTFKLWMAE 521
>UNIPROTKB|Q8TED0 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 EMBL:AK022849
EMBL:AK074217 EMBL:AC010279 EMBL:BC013064 EMBL:CR457295
IPI:IPI00152708 RefSeq:NP_115551.2 UniGene:Hs.406703
ProteinModelPortal:Q8TED0 SMR:Q8TED0 STRING:Q8TED0
PhosphoSite:Q8TED0 DMDM:296452998 SWISS-2DPAGE:Q8TED0 PaxDb:Q8TED0
PRIDE:Q8TED0 DNASU:84135 Ensembl:ENST00000296792 GeneID:84135
KEGG:hsa:84135 UCSC:uc003kcw.1 GeneCards:GC05P072898
HGNC:HGNC:25758 neXtProt:NX_Q8TED0 PharmGKB:PA142670631
InParanoid:Q8TED0 ChiTaRS:UTP15 GenomeRNAi:84135 NextBio:73441
ArrayExpress:Q8TED0 Bgee:Q8TED0 CleanEx:HS_UTP15
Genevestigator:Q8TED0 GermOnline:ENSG00000164338 Uniprot:Q8TED0
Length = 518
Score = 115 (45.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 60/212 (28%), Positives = 95/212 (44%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 85 CATFRQDGRLLVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F K H V C + + + +TGSYD ++++D R+ S
Sbjct: 142 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDART-S 197
Query: 230 KPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKV-----GGEKAEVLETYAKH 284
+ V SV G V + P GL+++A G VKV GG+ L+ + K
Sbjct: 198 ESV--LSVEHGQPVESVLLFPS-GGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHHKT 250
Query: 285 GS-LAYGADWQRGRS-SLEGKRKNSLVATCSF 314
+ L + QR S SL+ RK + +T S+
Sbjct: 251 VTCLCLSSSGQRLLSGSLD--RKVKVYSTTSY 280
Score = 44 (20.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 10 GNADAVEFCPQDSYHHVLAAST 31
G V+F PQ Y++ + AS+
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS 60
>UNIPROTKB|A7MB12 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:BC151279 IPI:IPI00703711 RefSeq:NP_001094598.1
UniGene:Bt.13342 ProteinModelPortal:A7MB12 STRING:A7MB12
Ensembl:ENSBTAT00000036838 GeneID:526343 KEGG:bta:526343 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 InParanoid:A7MB12 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 NextBio:20874350 Uniprot:A7MB12
Length = 519
Score = 115 (45.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 58/212 (27%), Positives = 95/212 (44%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + + F + H+V +G+
Sbjct: 85 CATFRQDGRLLVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHSVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F K H V C + +++ +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDARTNQ 198
Query: 230 KPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKV-----GGEKAEVLETYAKH 284
+ SV G V + P GL+++A G VKV GG+ L+ + K
Sbjct: 199 SVI---SVEHGQPVESVLLFPS-GGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHHKT 250
Query: 285 GS-LAYGADWQRGRS-SLEGKRKNSLVATCSF 314
+ L + QR S SL+ RK + +T S+
Sbjct: 251 VTCLCLSSSGQRLLSGSLD--RKVKVYSTTSY 280
Score = 44 (20.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 10 GNADAVEFCPQDSYHHVLAAST 31
G V+F PQ Y++ + AS+
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS 60
>UNIPROTKB|H0Y8P4 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
OMA:QFEGHTK EMBL:AC010279 HGNC:HGNC:25758 ChiTaRS:UTP15
Ensembl:ENST00000509005 Uniprot:H0Y8P4
Length = 545
Score = 115 (45.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 60/212 (28%), Positives = 95/212 (44%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 112 CATFRQDGRLLVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 168
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F K H V C + + + +TGSYD ++++D R+ S
Sbjct: 169 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDART-S 224
Query: 230 KPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKV-----GGEKAEVLETYAKH 284
+ V SV G V + P GL+++A G VKV GG+ L+ + K
Sbjct: 225 ESV--LSVEHGQPVESVLLFPS-GGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHHKT 277
Query: 285 GS-LAYGADWQRGRS-SLEGKRKNSLVATCSF 314
+ L + QR S SL+ RK + +T S+
Sbjct: 278 VTCLCLSSSGQRLLSGSLD--RKVKVYSTTSY 307
Score = 44 (20.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 10 GNADAVEFCPQDSYHHVLAAST 31
G V+F PQ Y++ + AS+
Sbjct: 66 GAVSKVDFSPQPPYNYAVTASS 87
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 116 (45.9 bits), Expect = 0.00054, P = 0.00054
Identities = 31/133 (23%), Positives = 55/133 (41%)
Query: 101 EKISSSMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDV 159
E +S C+ W+ ++ +G+V + Q + Q HE W+ F++
Sbjct: 168 EMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQ--EHEKRCWSVDFNL 225
Query: 160 HQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEY 219
P ++ +GSDD K W + + K VCC+ PS L G D
Sbjct: 226 MDPKLLASGSDDAKVKLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHC 281
Query: 220 LRVWDVRSISKPV 232
+ +D+R+ +P+
Sbjct: 282 VHYYDLRNTKQPI 294
>UNIPROTKB|F1NUL8 [details] [associations]
symbol:WDR77 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060770 "negative
regulation of epithelial cell proliferation involved in prostate
gland development" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GeneTree:ENSGT00390000010711 EMBL:AADN02044988
IPI:IPI00923799 Ensembl:ENSGALT00000002188 ArrayExpress:F1NUL8
Uniprot:F1NUL8
Length = 346
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 111 LEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHM-VYTGS 169
L W + I VG G+V + + E + ++ ++ +E + + DV +G
Sbjct: 84 LRW-VADRGILVGSDSGAVELWELDEKETLIVNKFCKYEHDDMVEAVDVLAGSTRAVSGG 142
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
D WD+ P + + + H V C+A+ P L+ + DE + +WD R
Sbjct: 143 RDFSVKVWDL---PQQAVLHSYRAHSDAVTCVAACPGKDTIFLSCAEDERILLWDTRC-P 198
Query: 230 KPVNETSVCL 239
KP ++CL
Sbjct: 199 KPATRIAICL 208
>ASPGD|ASPL0000074293 [details] [associations]
symbol:AN4800 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001303 EMBL:AACD01000081 KO:K11801 RefSeq:XP_662404.1
ProteinModelPortal:Q5B3T0 EnsemblFungi:CADANIAT00005621
GeneID:2872599 KEGG:ani:AN4800.2 HOGENOM:HOG000194480 OMA:KSSPHIL
OrthoDB:EOG4NCQND Uniprot:Q5B3T0
Length = 660
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 40/142 (28%), Positives = 65/142 (45%)
Query: 88 ADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKA 147
+ A + RDI G + ++ I G D SV IV +E++ VL+ +
Sbjct: 320 SSAQRRVARDIFGR--DGFAVWSVRFSGDGREIVAGTGDHSV-IVYDLETRQSVLRI-RN 375
Query: 148 HEFELWATSF-DVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPS 206
HE ++ A F D PH++Y+GSDD WD R H G+ + S
Sbjct: 376 HEDDVNAVCFGDKSSPHILYSGSDDSTVRVWDRRSMADGREAGVFVGHTEGLTYVDS-KG 434
Query: 207 DSNTLLTGSYDEYLRVWDVRSI 228
D +L+ S D+ +++WD+R +
Sbjct: 435 DGRYVLSNSKDQTMKLWDLRKM 456
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 31/133 (23%), Positives = 55/133 (41%)
Query: 101 EKISSSMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDV 159
E +S C+ W+ ++ +G+V + Q + Q HE W+ F++
Sbjct: 301 EMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQ--EHEKRCWSVDFNL 358
Query: 160 HQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEY 219
P ++ +GSDD K W + + K VCC+ PS L G D
Sbjct: 359 MDPKLLASGSDDAKVKLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHC 414
Query: 220 LRVWDVRSISKPV 232
+ +D+R+ +P+
Sbjct: 415 VHYYDLRNTKQPI 427
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 113 (44.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 57/214 (26%), Positives = 95/214 (44%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 85 CATFRQDGQLLVAGSEDGVVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F K H V C + + + +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART-- 196
Query: 230 KPVNETSVCLGGGVWRIKHHPFIP--GLVLAACMHNGFAVVKV-----GGEKAEVLETYA 282
N+ +C+ G ++ P GL+++A G VKV GG+ L+ +
Sbjct: 197 ---NKNVLCVEHGQ-PVESVLLFPSGGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHH 248
Query: 283 KHGS-LAYGADWQRGRS-SLEGKRKNSLVATCSF 314
K + L + QR S SL+ RK + +T S+
Sbjct: 249 KTVTCLCLSSSGQRLLSGSLD--RKVKIYSTTSY 280
Score = 44 (20.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 10 GNADAVEFCPQDSYHHVLAAST 31
G V+F PQ Y++ + AS+
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS 60
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 46/198 (23%), Positives = 86/198 (43%)
Query: 68 GIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGEKISSSMC------LCLEWNP-SATS 119
G+ + W+ N LA +D + + DIT ++ ++ CL WN T+
Sbjct: 265 GVMSLSWNSHQRNV---LASGSSDNTVKVWDITTQQCLNTFTHHKDKVSCLHWNSHEKTA 321
Query: 120 ITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDI 179
+ +G D VSI+ V + +W + E+ + S++ H P G+DD + +D
Sbjct: 322 LLIGSHDKHVSILDVRAP--DSAYKWSV-KGEVESLSWNPHNPKEFIVGTDDGRLLCYDA 378
Query: 180 RESPFKLAFQNSKIHKMG-VCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS-KPVNETSV 237
+ + + G V C + P TGS D +++W++ + S KP S
Sbjct: 379 TLGTAAAPVWSVQASQKGSVSCFSYCPGQVGFFATGSSDHTVKLWNLETSSNKPTLIESK 438
Query: 238 CLGGGVWRI---KHHPFI 252
LG ++ + ++ PF+
Sbjct: 439 NLGQEIFTLSFFENSPFL 456
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 117 (46.2 bits), Expect = 0.00085, P = 0.00085
Identities = 40/186 (21%), Positives = 75/186 (40%)
Query: 101 EKISSSMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDV 159
E +S C+ W+ ++ +G+V + Q + Q HE W+ F++
Sbjct: 452 EMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQ--EHEKRCWSVDFNL 509
Query: 160 HQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEY 219
P ++ +GSDD K W + + K VCC+ PS L G D
Sbjct: 510 MDPKLLASGSDDAKVKLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHC 565
Query: 220 LRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGL-VLAACMHNGFAVVKVGGEKAEVL 278
+ +D+R+ +P+ + G + + F+ G +++A + + VG K L
Sbjct: 566 VHYYDLRNTKQPI----MVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVG--KPHCL 619
Query: 279 ETYAKH 284
++ H
Sbjct: 620 RSFKGH 625
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 67/272 (24%), Positives = 111/272 (40%)
Query: 33 TLQEGDKPSRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSP-----VGGNAGPFLAQ 87
T Q S + SI L+N + +N +L A I D++WS +A LA
Sbjct: 77 TAQHIASGSMDRSILLWNTYGQCENYGILSGHKGA-ILDLQWSRDSKTIFSASADMTLAS 135
Query: 88 ADADGG--LLRDITGEKISSSMCLCLEWNPSATSITVGLSD-GSVSIVSVVESQLEVLQQ 144
D + G + R I E++ +S+ E + + V SD G++ I Q E +
Sbjct: 136 WDIESGQRIRRYIGHEEVINSV----EISKRGQEMLVSASDDGTMGIWD--PRQKEAIDY 189
Query: 145 WKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASI 204
+ E + A + + V++G D WDIR K A S M +
Sbjct: 190 LET-ELPITAVA-QSEAGNEVFSGGIDNAIHVWDIR----KKAIVYSMAGHMDTITSLEV 243
Query: 205 PSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNG 264
DS TLL+ S+D +R WD+R + P N G ++ + L+ A+ G
Sbjct: 244 SPDSQTLLSNSFDSTVRTWDIRPFA-PTNRHIRTYDGAPVGLEKN-----LIRASWNPAG 297
Query: 265 FAVVKVGGEKAEVLETYAKHGSLAYGADWQRG 296
+ G+++ V+ + K G + Y +G
Sbjct: 298 DKIAAGSGDRSVVVWDF-KTGKILYKLPGHKG 328
>UNIPROTKB|B4DXK8 [details] [associations]
symbol:UTP15 "cDNA FLJ57656, highly similar to U3 small
nucleolar RNA-associated protein 15 homolog" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 HOGENOM:HOG000185028
HOVERGEN:HBG080690 EMBL:AC010279 UniGene:Hs.406703 HGNC:HGNC:25758
ChiTaRS:UTP15 IPI:IPI00967090 EMBL:AK302021 SMR:B4DXK8
STRING:B4DXK8 Ensembl:ENST00000508491 UCSC:uc011cso.1
Uniprot:B4DXK8
Length = 499
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 60/212 (28%), Positives = 95/212 (44%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 66 CATFRQDGRLLVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 122
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F K H V C + + + +TGSYD ++++D R+ S
Sbjct: 123 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDART-S 178
Query: 230 KPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVVKV-----GGEKAEVLETYAKH 284
+ V SV G V + P GL+++A G VKV GG+ L+ + K
Sbjct: 179 ESV--LSVEHGQPVESVLLFPS-GGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHHKT 231
Query: 285 GS-LAYGADWQRGRS-SLEGKRKNSLVATCSF 314
+ L + QR S SL+ RK + +T S+
Sbjct: 232 VTCLCLSSSGQRLLSGSLD--RKVKVYSTTSY 261
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 114 (45.2 bits), Expect = 0.00096, P = 0.00096
Identities = 41/173 (23%), Positives = 75/173 (43%)
Query: 111 LEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
L+W+P+ ++ S D S+ I + +L +AH ++ S++ +P + +G
Sbjct: 278 LQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTEP-FILSGG 336
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWD--VRS 227
DD WD+R+ + K H V + P DS+ D+ + WD V S
Sbjct: 337 DDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQWDLSVES 396
Query: 228 IS--------KPVNETSVCLGGGVWRIK--H-HPFIPGLVLAACMHNGFAVVK 269
K + + L G +K H HP IPG++++ + +GF + +
Sbjct: 397 CDMGGQAEDVKQLPPQLLFLHQGQKEVKELHWHPQIPGVLISTAL-SGFNIFR 448
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 331 331 0.00090 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 628 (67 KB)
Total size of DFA: 267 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.53u 0.06s 26.59t Elapsed: 00:00:03
Total cpu time: 26.54u 0.06s 26.60t Elapsed: 00:00:03
Start: Sat May 11 02:01:12 2013 End: Sat May 11 02:01:15 2013