BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020107
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BTV6|WDR85_HUMAN WD repeat-containing protein 85 OS=Homo sapiens GN=WDR85 PE=2 SV=2
Length = 452
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 170/330 (51%), Gaps = 51/330 (15%)
Query: 11 NADAVEFCPQDSYHHVLAASTYTLQEG-DKPS---------------RNGSISL--FNVN 52
AD+VE+CP H+LA TY L+ D+P+ R G + L FN N
Sbjct: 15 TADSVEWCPLQGCRHLLACGTYQLRRPEDRPAGPQNKGGMEVKEPQVRLGRLFLYSFNDN 74
Query: 53 AEEKNLELLYRMDTAGIFDIKWS--PVGGNAGPFLAQADADGGLLRDITGEK------IS 104
L + R DT+ I D+KW PV G+A LA A LLR + EK +S
Sbjct: 75 NSIHPLVEVQRKDTSAILDMKWCHIPVAGHALLGLADASGSIQLLRLVESEKSHVLEPLS 134
Query: 105 S------SMCLCLEWNPSAT--------SITVGLSDGSVSIVSVVESQ--LEVLQQWKAH 148
S + L L+W+ T I S G + ++ V E++ L+ + W+AH
Sbjct: 135 SLALEEQCLALSLDWSTGKTGRAGDQPLKIISSDSTGQLHLLMVNETRPRLQKVASWQAH 194
Query: 149 EFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDS 208
+FE W +F+ P +VY+G DD GWD R P K F SK H MGVC I S P
Sbjct: 195 QFEAWIAAFNYWHPEIVYSGGDDGLLRGWDTR-VPGKFLF-TSKRHTMGVCSIQSSPHRE 252
Query: 209 NTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVV 268
+ L TGSYDE++ +WD R++ +P+ +T V GGVWRIK HPF L+LAACMH+GF ++
Sbjct: 253 HILATGSYDEHILLWDTRNMKQPLADTPV--QGGVWRIKWHPFHHHLLLAACMHSGFKIL 310
Query: 269 KVGG-----EKAEVLETYAKHGSLAYGADW 293
++A VL ++ SL YGADW
Sbjct: 311 NCQKAMEERQEATVLTSHTLPDSLVYGADW 340
>sp|Q9CYU6|WDR85_MOUSE WD repeat-containing protein 85 OS=Mus musculus GN=Wdr85 PE=2 SV=1
Length = 477
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 167/324 (51%), Gaps = 45/324 (13%)
Query: 11 NADAVEFCPQDSYHHVLAASTYTLQ--------EGDKPS-RNGSISLFNVNAEEKNLELL 61
AD+VE+CP + Y H+LA TY L+ +G +P R G + LF+ + LL
Sbjct: 20 TADSVEWCPVEGYQHLLACGTYQLRAPRDQPALDGSEPQVRLGRLYLFSFSEHNTAKPLL 79
Query: 62 --YRMDTAGIFDIKWS--PVGGNAGPFLAQADADGGLLR-------DITGEKISS----- 105
R D++ + D+KW PV G+ LA A GLLR T + ISS
Sbjct: 80 EVQRRDSSAVLDMKWCHIPVSGHVLLGLANASGSIGLLRLMECENNSYTLQPISSLALDE 139
Query: 106 -SMCLCLEWNPSAT--------SITVGLSDGSVSIVSVVE--SQLEVLQQWKAHEFELWA 154
+ L ++W+ + I S G + ++ V E ++L+++ W AH FE W
Sbjct: 140 NCLSLSMDWSTGKSVRAREQPLKIISSDSKGQLHLLMVNEGTAELQLVASWPAHHFEAWI 199
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTG 214
+F+ Q +VY+G DDC GWD R SK H MGVC I S P + L TG
Sbjct: 200 AAFNYWQTELVYSGGDDCLLRGWDTRM--LGTPVFTSKRHCMGVCSIQSSPHQEHILATG 257
Query: 215 SYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAVV---KVG 271
SYDE++ +WD R+I +P+ + V GGVWR+K HP L+LAACMHNGF ++ K
Sbjct: 258 SYDEHVLLWDTRNIRQPLADVPV--QGGVWRLKWHPVHHHLLLAACMHNGFKILNCQKAI 315
Query: 272 GEKAE--VLETYAKHGSLAYGADW 293
EK + VL ++ SL YGADW
Sbjct: 316 EEKQDITVLTSHEMPNSLVYGADW 339
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 306 NSLVATCSFYDRLLRIWMPESD 327
NSL+ATCSFYD +L +W E++
Sbjct: 438 NSLLATCSFYDHVLHLWKWETN 459
>sp|Q55C80|WDR85_DICDI WD repeat-containing protein 85 homolog OS=Dictyostelium discoideum
GN=wdr85 PE=3 SV=1
Length = 367
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 68/371 (18%)
Query: 8 LDGNADAVEFCPQDSYHHVLAASTYTLQEGD---KPSRNGSISLF--------------- 49
LD +D+VEF P + +++ TY +++GD K R G + LF
Sbjct: 11 LDYTSDSVEFYPFN--NNIFVCGTYEIEKGDTEYKERRKGKLYLFEIEEEQQQKENDNNN 68
Query: 50 ------NVNAEEKNLELLYRMDTAGIFDIKWSP--------VGGNAGPFLAQADADGGLL 95
+ E +N+ +GI D+KW+ V + Q D L
Sbjct: 69 ENNNNNKLFKEIQNINF-----NSGILDMKWNNNKDRILGVVMSKGELNIYQYDEVEKKL 123
Query: 96 RDITGEKISSS---MCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQ--WKAHEF 150
+ +IS S + L L+WN S + SDG++ + V + +V ++ WKAH++
Sbjct: 124 ELKSSTEISLSNDILSLSLDWNKSGDKLICSFSDGNIGLFKVTKDYSKVTEEKRWKAHDY 183
Query: 151 ELWATSFDVHQPHMVYTGSDDCKFSGWDIRE----------SPFKLAFQNSKIHKMGVCC 200
E W +F+ H +V++G DDCKF WD+ + P F +K MGV
Sbjct: 184 EAWICAFNYHDESIVFSGGDDCKFKIWDLNQLLNHNDDDIGIPPTPKF--TKRCDMGVTS 241
Query: 201 IASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAAC 260
I P+ N + GSYDE LR+WD++S+ +P+ T+ LGGG+WRIK HPF ++ AC
Sbjct: 242 IHCHPTIENLIAVGSYDECLRIWDLKSLKQPI-ITTDSLGGGIWRIKWHPFQKNKLVTAC 300
Query: 261 MHNGFAVVKVGGEKA------EVLETY-AKHGSLAYGADWQRGRSSLEGKRKNSLVATCS 313
M GF ++ E ++ ++Y H S+AYG DW +++ + + + CS
Sbjct: 301 MGGGFHILSTDPENINDFSTLQIEQSYNGPHKSIAYGVDWSFNKNNFDKQ----FIGCCS 356
Query: 314 FYDRLLRIWMP 324
FYD+ L IW+P
Sbjct: 357 FYDKCLSIWIP 367
>sp|O74865|WDR85_SCHPO WD repeat-containing protein C18.15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.15 PE=3 SV=2
Length = 326
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 151/315 (47%), Gaps = 33/315 (10%)
Query: 23 YHHVLAASTYTLQEGDKPSRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSP------ 76
+ VL TY L E K R+G + L++ +E L+ ++ M I D KWSP
Sbjct: 27 FEDVLVVGTYMLDESTKL-RHGKLVLYD--TKEDVLKRVFDMHCDAILDFKWSPHDASVL 83
Query: 77 ----VGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVSIV 132
G+ + Q A+ LR I SS + L L+++ S + V +S+GSV I+
Sbjct: 84 AVAHSTGHVSFYRHQFRAELMFLRGIKVAD-SSVLMLSLDFSDSGKELAVSMSNGSVLII 142
Query: 133 SVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSK 192
+ ++ +WK H++E W + +++Y+G DD +D R P +++ +
Sbjct: 143 DIDSGVIK--NKWKEHDYEAWTCHYSRQDNNLLYSGGDDAALVCYDQR-IPNSCIWRDIQ 199
Query: 193 IHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFI 252
+H GV I S + TG Y +++ D R+I KP+ S LGGGVWR++H
Sbjct: 200 VHHSGVVSILSRAPFGPYIATGEYGDFMHTLDTRNIGKPL--FSANLGGGVWRLEHMETT 257
Query: 253 PGL--VLAACMHNGFAVVKVGGEKAEV---LETYAKHGSLAYGADWQRGRSSLEGKRKNS 307
VL MH G V+++ + + + + +H S+ YG DW + +
Sbjct: 258 ENYHKVLGILMHRGAQVLRISNDFSSIDASKRIFKEHESMCYGGDW---------RHTDG 308
Query: 308 LVATCSFYDRLLRIW 322
L+ATCSFYD+ + +W
Sbjct: 309 LLATCSFYDKRVCLW 323
>sp|P38332|WDR85_YEAST Diphthamide biosynthesis protein RRT2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRT2 PE=1 SV=1
Length = 387
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 41/214 (19%)
Query: 138 QLEVLQQWKAHEFELWATSFDVHQPH--MVYTGSDDCKFSGWDIRESPFKLAFQNSKIHK 195
+E Q K HE E W F QP +V+TG DD + D+R F + N++IH
Sbjct: 186 HVESGQFLKPHELECWTAEFGSLQPFQDVVFTGGDDSRIMAHDLRSKEF--IWSNNRIHD 243
Query: 196 MGVCCI-ASIPSDSN----TLLTGSYDEYLRVWDVRSISK---------PVNETSVCLGG 241
GV I S P+ N +++TGSYD+ +R D+R + + VN+ + LGG
Sbjct: 244 AGVVSIKCSQPNFRNNKPTSIITGSYDDNIRSLDLRMMGESIFPGANVPTVNKLACDLGG 303
Query: 242 GVWRIKHHPFI--------PGLVLAACMHNGFAVVKVGGEKAEVLET--YAK--HGSLAY 289
GVWR P +L CM+NG VV + E + Y K H S+ Y
Sbjct: 304 GVWRFVESPIDQEQSHHNGSDRLLVCCMYNGAKVVTMNDNSDEYFQIQHYLKKGHDSMCY 363
Query: 290 GADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWM 323
G DW NSL+ATCSFYD L+ W+
Sbjct: 364 GGDWS-----------NSLIATCSFYDNSLQTWI 386
>sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1
PE=1 SV=2
Length = 675
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 101 EKISSSMCLCLEWNP-SATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDV 159
E + S CL WN I +G V++ V Q L +++ HE W+ F
Sbjct: 416 EMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQ--SLMEYEEHEKRAWSVDFSR 473
Query: 160 HQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEY 219
+P M+ +GSDDCK W R+ + K +CC+ P SN + GS D +
Sbjct: 474 TEPSMLVSGSDDCKVKVWCTRQEASVINID----MKANICCVKYNPGSSNYIAVGSADHH 529
Query: 220 LRVWDVRSISKPVN 233
+ +D+R+IS+P++
Sbjct: 530 IHYYDLRNISQPLH 543
>sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1
Length = 672
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 101 EKISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVH 160
E + S CL WN A + + SD + + + L +++ HE W+ F
Sbjct: 413 EMTTRSKLSCLSWNKYAKN-QIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRT 471
Query: 161 QPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYL 220
P M+ +GSDDCK W + L K +CC+ P N + GS D ++
Sbjct: 472 DPSMLVSGSDDCKVKVWCTNQEASVLNID----MKANICCVKYNPGSGNYIAVGSADHHI 527
Query: 221 RVWDVRSISKPVN 233
+D+R+IS+PV+
Sbjct: 528 HYYDLRNISRPVH 540
>sp|O00628|PEX7_HUMAN Peroxisomal targeting signal 2 receptor OS=Homo sapiens GN=PEX7
PE=1 SV=1
Length = 323
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 36/300 (12%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGE 101
G +L ++ +E L L D G+FD+ WS N L DG L L D
Sbjct: 44 GCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSE---NNEHVLITCSGDGSLQLWDTA-- 98
Query: 102 KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL---------EVLQQWKAHEFEL 152
K + + + E S+ + G +VS Q + L ++ HE +
Sbjct: 99 KAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESII 158
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N L+
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVI---PAHQAEILSCDWCKYNENLLV 215
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIP--GLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E L G + I+ F P VLA+C ++
Sbjct: 216 TGAVDCSLRGWDLRNVRQPVFE----LLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 271
Query: 271 GGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCLT 330
+ +LET H G D+ SL+ + VA CS +D ++I+ P CLT
Sbjct: 272 FSKPDSLLETVEHHTEFTCGLDF-----SLQSPTQ---VADCS-WDETIKIYDPA--CLT 320
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 41 SRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLLRDITG 100
S +GS+ L++ L++ Y+ ++ + WS G D L G
Sbjct: 87 SGDGSLQLWDTAKAAGPLQV-YKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG 145
Query: 101 EKISS-----SMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWA 154
+ + + S+ W+P S D ++ I V + + ++ AH+ E+ +
Sbjct: 146 KSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVI--PAHQAEILS 203
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWD---IRESPFKLAFQNSKIHKMGVCCIASIPSDSNTL 211
+ + +++ TG+ DC GWD +R+ F+L I ++ P ++ L
Sbjct: 204 CDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFS-----PFHASVL 258
Query: 212 LTGSYDEYLRVWDVRSISKP 231
+ SYD +R W+ SKP
Sbjct: 259 ASCSYDFTVRFWN---FSKP 275
>sp|P97865|PEX7_MOUSE Peroxisomal targeting signal 2 receptor OS=Mus musculus GN=Pex7
PE=2 SV=1
Length = 318
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 36/300 (12%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGE 101
G +L ++ E L++ D G+FD+ WS N L DG L L D
Sbjct: 39 GCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSE---NNEHVLVTCSGDGSLQLWDTA-- 93
Query: 102 KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL---------EVLQQWKAHEFEL 152
K + + + E S+ + G +VS Q L ++ HE +
Sbjct: 94 KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVI 153
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N ++
Sbjct: 154 YSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVI---PAHQTEILSCDWCKYNENLVV 210
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIP--GLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E L G + I+ F P VLA+C ++
Sbjct: 211 TGAVDCSLRGWDLRNVRQPVFE----LLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 266
Query: 271 GGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCLT 330
+ +LET H G D SL+ + VA CS +D ++I+ P CLT
Sbjct: 267 FSKPDPLLETVEHHTEFTCGLD-----LSLQSPTQ---VADCS-WDETIKIYDPV--CLT 315
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 41 SRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLLRDITG 100
S +GS+ L++ L++ Y+ T ++ + WS G D + G
Sbjct: 82 SGDGSLQLWDTAKATGPLQV-YKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG 140
Query: 101 EKISS-----SMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWA 154
+ + S+ W+P S D ++ I V + + ++ AH+ E+ +
Sbjct: 141 NSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVI--PAHQTEILS 198
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWD---IRESPFKLAFQNSKIHKMGVCCIASIPSDSNTL 211
+ + ++V TG+ DC GWD +R+ F+L I ++ P ++ L
Sbjct: 199 CDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFS-----PFHASVL 253
Query: 212 LTGSYDEYLRVWDVRSISKP 231
+ SYD +R W+ SKP
Sbjct: 254 ASCSYDFTVRFWN---FSKP 270
>sp|Q8R537|PEX7_CRIGR Peroxisomal targeting signal 2 receptor OS=Cricetulus griseus
GN=PEX7 PE=1 SV=1
Length = 318
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 36/300 (12%)
Query: 44 GSISLFNVNAEEKNLELLYRMD-TAGIFDIKWSPVGGNAGPFLAQADADGGL-LRDITGE 101
G +L ++ + L++ D + G+FD+ WS + L DG L L D
Sbjct: 39 GCGTLIILDQNQSGLQIFRSFDWSDGLFDVTWSEDNEHV---LVTCSGDGSLQLWDTA-- 93
Query: 102 KISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQL---------EVLQQWKAHEFEL 152
K + + + E S+ + G +VS Q L ++ HE +
Sbjct: 94 KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVI 153
Query: 153 WATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLL 212
++T + H P + S D WD++ + ++ H+ + + N ++
Sbjct: 154 YSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIVI---PAHQTEILSCDWCKYNENLVV 210
Query: 213 TGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIP--GLVLAACMHNGFAVVKV 270
TG+ D LR WD+R++ +PV E L G + I+ F P VLA+C ++
Sbjct: 211 TGAVDCSLRGWDLRNVRQPVFE----LLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 266
Query: 271 GGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLRIWMPESDCLT 330
+ +LET H G D SL+ + VA CS +D ++I+ P CLT
Sbjct: 267 FSKPDPLLETVEHHTEFTCGLD-----LSLQSPTE---VADCS-WDETIKIYDPV--CLT 315
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 41 SRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLLRDITG 100
S +GS+ L++ L++ Y+ T ++ + WS G D + G
Sbjct: 82 SGDGSLQLWDTAKATGPLQV-YKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG 140
Query: 101 EKISS-----SMCLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHEFELWA 154
+ + S+ W+P S D ++ I V + + ++ AH+ E+ +
Sbjct: 141 NSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIVI--PAHQTEILS 198
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWD---IRESPFKLAFQNSKIHKMGVCCIASIPSDSNTL 211
+ + ++V TG+ DC GWD +R+ F+L I ++ P ++ L
Sbjct: 199 CDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFS-----PFHASVL 253
Query: 212 LTGSYDEYLRVWDVRSISKPVNET 235
+ SYD +R W+ S P+ ET
Sbjct: 254 ASCSYDFTVRFWNF-SKPDPLLET 276
>sp|A8XEN7|DCA11_CAEBR DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis
briggsae GN=wdr-23 PE=3 SV=2
Length = 554
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 20/171 (11%)
Query: 97 DITGEKISSSMC--LCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWA 154
D GE + C C+ ++ + I G S+ S+ + V E + + AHE ++ +
Sbjct: 237 DWHGEHAVQNQCAVFCVRFSDDSEQIVCGTSEYSIHVFDV-EQRRRIRTIVNAHEDDVNS 295
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKI--------HKMGVCCIASIPS 206
F + +++Y+ DD WD K A+ + + H+ GV + S
Sbjct: 296 VCFADYGSNLIYSAGDDGLVKVWD------KRAWSDGDVIPVGVFAGHRDGVTYVDS-RQ 348
Query: 207 DSNTLLTGSYDEYLRVWDVRSIS--KPVNETSVCLGGGVWRIKHHPFIPGL 255
D LL+ S D+ ++VWD+R S V T C+ W + P PGL
Sbjct: 349 DERYLLSNSKDQTIKVWDLRKFSCQGGVEATRACVQSQHWDYRWQPAPPGL 399
>sp|P90794|DCA11_CAEEL DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis
elegans GN=wdr-23 PE=2 SV=1
Length = 571
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 109 LCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTG 168
C++++ S+ I G S S+ + V E + + AHE ++ + F +++Y+
Sbjct: 272 FCVKFSDSSEQIVCGTSQYSIHVFDV-EQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSA 330
Query: 169 SDDCKFSGWDIRESPFKLAFQNSKI--------HKMGVCCIASIPSDSNTLLTGSYDEYL 220
DD WD K A+ + + H+ GV + S D LL+ S D+ +
Sbjct: 331 GDDGLVKVWD------KRAWSDGDVEPVGVFAGHRDGVTHVDS-RQDERYLLSNSKDQTI 383
Query: 221 RVWDVRSISK--PVNETSVCLGGGVWRIKHHPFIPGL 255
+VWD+R S V T C+ W + P PGL
Sbjct: 384 KVWDLRKFSNMSGVEATRACVQSQHWDYRWQPAPPGL 420
>sp|Q54DS4|Y2056_DICDI WD repeat-containing protein DDB_G0292056 OS=Dictyostelium
discoideum GN=DDB_G0292056 PE=4 SV=1
Length = 1823
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 22/194 (11%)
Query: 132 VSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNS 191
+ +++S + QQ K +E+ ++ P++V + S+ F WDI + L Q S
Sbjct: 126 LELLKSVRNIPQQSK---WEVGVVDWNSQSPNLVASSSNQDTFI-WDIENPKYPLLGQFS 181
Query: 192 KIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSV---CLGGGVWRIKH 248
H+ + ++ D+N L T S D ++ +WD+R+ K V S+ LG ++K
Sbjct: 182 S-HQRAISDLSWSLFDNNILATTSADSFVNIWDLRTPKKAVKFKSLKSHILGA--IQVKW 238
Query: 249 HPFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSL 308
+ F ++ +A H + ++ + ++ L T A H + YG DW R
Sbjct: 239 NRFNSNVLASA--HESYLMIWDIRKDSQELNT-AVHSAKVYGIDWSH--------RDEKE 287
Query: 309 VATCSFYDRLLRIW 322
+ TCS D+ ++IW
Sbjct: 288 ILTCS-QDKTVKIW 300
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 111 LEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSD 170
++WN + ++ S+ I + + +L Q+ +H+ + S+ + +++ T S
Sbjct: 146 VDWNSQSPNLVASSSNQDTFIWDIENPKYPLLGQFSSHQRAISDLSWSLFDNNILATTSA 205
Query: 171 DCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISK 230
D + WD+R + F++ K H +G + +SN +L +++ YL +WD+R S+
Sbjct: 206 DSFVNIWDLRTPKKAVKFKSLKSHILGAIQVKWNRFNSN-VLASAHESYLMIWDIRKDSQ 264
Query: 231 PVN 233
+N
Sbjct: 265 ELN 267
Score = 32.3 bits (72), Expect = 5.2, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 177 WDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETS 236
WDIR+ +L N+ +H V I D +LT S D+ +++W+ S P +++
Sbjct: 257 WDIRKDSQEL---NTAVHSAKVYGIDWSHRDEKEILTCSQDKTVKIWNYPS---PKPKST 310
Query: 237 VCLGGGVWRIKHHPFIPG 254
+ + R K+ P G
Sbjct: 311 IITSNPILRAKYLPLGSG 328
>sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2
Length = 1036
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 126 DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFK 185
DG V + V Q + + HE W+ F P + +GSDDC W+I E
Sbjct: 794 DGIVKLWDVTTGQ--AISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCL 851
Query: 186 LAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKP 231
+N VCC+ P S+ L GS D +D+R++ P
Sbjct: 852 GTIRN----IANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTP 893
>sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1
Length = 845
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 97 DITGEKISSSMCLCLEWNPSATS-ITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWAT 155
++ G SS+C WN S I DG V I V SQL + + K H+ +W+
Sbjct: 579 ELAGRSKLSSLC----WNSYIKSQIASSNFDGVVQIWDVARSQL--VTEMKEHKKRVWSI 632
Query: 156 SFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDS-NTLLTG 214
P ++ +GSDD W I + ++ K K VCC+ PSDS +L G
Sbjct: 633 DISSADPTLLASGSDDGTVKLWSINQG---VSIGTIKT-KANVCCV-QFPSDSGRSLAFG 687
Query: 215 SYDEYLRVWDVRSISKPV 232
S D + +D+R+ P+
Sbjct: 688 SADHKVYYYDLRNPKIPL 705
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 94 LLRDITGEKISSSMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELW 153
L+ I G ++S +C+C + G SD S+ + +E +Q K HE +
Sbjct: 453 LIETIKGYHVTSHLCIC------DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVE 506
Query: 154 ATSFDVHQPHMVYTGSDDCKFSGWDIRE--SPFKLAFQNSKIHKMGVCCIASIPSDSNTL 211
+ ++ +++GS D WD+++ F L + +H ++ + L
Sbjct: 507 SICYN---DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVH--------TVLLNDKYL 555
Query: 212 LTGSYDEYLRVWDVRSI 228
+GS D+ ++VWD++++
Sbjct: 556 FSGSSDKTIKVWDLKTL 572
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 163 HMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRV 222
+++GS+D WD++ + +C + + L +GSYD+ +RV
Sbjct: 593 QYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGT------NLYSGSYDKTIRV 646
Query: 223 WDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAACMHNGFAV 267
W+++S+ E S L G ++H L+ A N +
Sbjct: 647 WNLKSL-----ECSATLRGHDRWVEHMVICDKLLFTASDDNTIKI 686
>sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum
GN=MSI1 PE=2 SV=1
Length = 424
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 139 LEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGV 198
LE +Q +K HE + ++ + ++ + DD WD+R Q+ H+ V
Sbjct: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEV 276
Query: 199 CCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLA 258
C+A P + + TGS D+ ++++D+R IS ++ T C V+++ +P ++ +
Sbjct: 277 NCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALH-TLDCHKEEVFQVGWNPKNETILAS 335
Query: 259 ACM 261
C+
Sbjct: 336 CCL 338
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 146 KAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIP 205
+ H E + S+ + + +GSDD WDI +P A + +I K+ + +
Sbjct: 175 RGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEGVVEDVA 234
Query: 206 SD-SNTLLTGSY--DEYLRVWDVR--SISKPVNETSVCLGGGVWRIKHHPFIPGLVLAAC 260
+ L GS D+YL VWD+R S++KP+ ++ V V + +PF +V
Sbjct: 235 WHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPI-QSVVAHQSEVNCLAFNPFNEWVVATGS 293
Query: 261 MHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLR 320
+ + + + L T H + W + +++A+C RL+
Sbjct: 294 TDKTVKLFDL-RKISTALHTLDCHKEEVFQVGW--------NPKNETILASCCLGRRLM- 343
Query: 321 IW 322
+W
Sbjct: 344 VW 345
>sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1
SV=2
Length = 733
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 145 WKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASI 204
++ HE W+ F++ P ++ +GSDD K W + + K VCC+
Sbjct: 511 YQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE----AKANVCCVKFS 566
Query: 205 PSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPG 254
PS L G D + +D+R+ +P+ + G + + F+ G
Sbjct: 567 PSSRYHLAFGCADHCVHYYDLRNTKQPI----MVFKGHRKAVSYAKFVSG 612
>sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1
SV=1
Length = 731
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 145 WKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASI 204
++ HE W+ F++ P ++ +GSDD K W + + K VCC+
Sbjct: 509 YQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIE----AKANVCCVKFS 564
Query: 205 PSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPG 254
PS L G D + +D+R+ +P+ + G + + F+ G
Sbjct: 565 PSSRYHLAFGCADHCVHYYDLRNTKQPI----MVFKGHRKAVSYAKFVSG 610
>sp|Q5REE0|UTP15_PONAB U3 small nucleolar RNA-associated protein 15 homolog OS=Pongo
abelii GN=UTP15 PE=2 SV=1
Length = 518
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + I G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 85 CATFRQDGRLIVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRS 227
DD WDI S L F+ H V C + + + +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEVLTFKE---HSDYVRCGCASKLNPDLFITGSYDHTVKMFDART 196
>sp|Q54WA3|PEX7_DICDI Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum
GN=pex7 PE=3 SV=1
Length = 316
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 118/299 (39%), Gaps = 34/299 (11%)
Query: 11 NADAVEFCPQDSYHHVLAASTYTLQEGDKPSRNGSISLFNVNAEEKNLELLYRMDTA-GI 69
N +VEF P + S + G NG + +V ++++ DT G+
Sbjct: 9 NGYSVEFSPFEEQRLACVTSQHFGIIG-----NGRQYILDV--LDRDIGAFKTFDTRDGL 61
Query: 70 FDIKWSPVG----------GNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWN-PSAT 118
+D WS G+ + QA + G R I + + ++WN +
Sbjct: 62 YDCTWSEENECHVASSSGDGSIKIWDTQAPSGG---RPIKSFEEHTKEVYSVDWNLVTKD 118
Query: 119 SITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWD 178
+ G D S+ I + + L+ ++ H + +++ + H+ + S D WD
Sbjct: 119 TFITGSWDQSIKIWNPRMDR--SLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWD 176
Query: 179 IRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVC 238
R++ + K H + + ++TGS D+ +R+WD+R +P T++
Sbjct: 177 SRDN---RSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRP---TTIL 230
Query: 239 LGG--GVWRIKHHPFIPGLVLAACMHNGFAVV-KVGGEKAEVLETYAKHGSLAYGADWQ 294
G V RIK P + LA+C ++ +V E+ ++ H G DW
Sbjct: 231 RGHTYAVRRIKCSPHSESM-LASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGLDWN 288
>sp|A7MB12|UTP15_BOVIN U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus
GN=UTP15 PE=2 SV=1
Length = 519
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + + F + H+V +G+
Sbjct: 85 CATFRQDGRLLVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHSVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRS 227
DD WDI S L F K H V C + +++ +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDART 196
>sp|Q75BS7|YD156_ASHGO WD repeat-containing protein ACR194C OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ACR194C PE=3 SV=1
Length = 513
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 49 FNVNAEEKNLELLYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMC 108
F+ + E+K L+ DTAG + W+ N P D+ + DIT K+ S
Sbjct: 193 FHPSQEKK---LIVGGDTAGTVGL-WNVADENPDP--EHPDS----VPDITRFKLFSRNV 242
Query: 109 LCLEWNPSATSITVGLS-DG---SVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHM 164
+E P+ +S + S DG S+ + S+ +L Q + F P++
Sbjct: 243 SKIEVFPTDSSKILAASYDGALRSIDMQSLKSDELLHFQNEHGDTLGISDCQFSYDSPNV 302
Query: 165 VYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWD 224
V + +F+ D+R P + K+G C+A PS ++ T S D LR+WD
Sbjct: 303 VMLTTLGGEFAQRDLRTKPDTMNIMRLSDKKIG--CMAIDPSRPYSVATASLDRTLRIWD 360
Query: 225 VR-SISKP 231
+R +++KP
Sbjct: 361 LRKTVAKP 368
>sp|Q8TED0|UTP15_HUMAN U3 small nucleolar RNA-associated protein 15 homolog OS=Homo
sapiens GN=UTP15 PE=1 SV=3
Length = 518
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 85 CATFRQDGRLLVAGSEDGGVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRS 227
DD WDI S L F+ H V C + + + +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEILTFKE---HSDYVRCGCASKLNPDLFITGSYDHTVKMFDART 196
>sp|A2RRU3|UTP15_RAT U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus
norvegicus GN=Utp15 PE=2 SV=1
Length = 528
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + S L+Q++ H + F + H+V +G+
Sbjct: 85 CATFRQDGQLLVAGSEDGVVQLFDI--SGRAPLRQFEGHTKAVHTVDFTADKYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F+ H V C + + + +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEILTFKE---HSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART-- 196
Query: 230 KPVNETSVCLGGG 242
N+ +C+ G
Sbjct: 197 ---NKNVLCVEHG 206
>sp|A8PD13|YTM1_COPC7 Ribosome biogenesis protein YTM1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=YTM1
PE=3 SV=1
Length = 448
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 167 TGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVR 226
T S D + +D+R A S +H C+A+ P S ++TG+YD +RVWD R
Sbjct: 331 TVSTDRTMTLYDLRTEEALSAAAGSFLHPATPSCVATTPESSYQVVTGAYDGVVRVWDTR 390
Query: 227 S 227
S
Sbjct: 391 S 391
>sp|Q3SZD4|WDR18_BOVIN WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1
Length = 432
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 19/122 (15%)
Query: 152 LWATSFDVHQPHMVYTGSDDCKFS----GWD-IRESPFKLAFQNSKI---HKMGVCCIAS 203
+ A + D+ + +M GSD F W RE F+ ++ K+ H+ V C+ S
Sbjct: 218 ILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCL-S 276
Query: 204 IPSDSNTLLTGSYDEYLRVWDVRS--------ISKPVNETSVCLGGGVWRIKHHPFIPGL 255
+ +D + LL+GS+DE +R+WDV+S + PV T+ C+ + F PGL
Sbjct: 277 VSTDGSVLLSGSHDETVRLWDVQSQQCLRTVTLKGPV--TNACIMLAPVSMLSSDFRPGL 334
Query: 256 VL 257
L
Sbjct: 335 PL 336
>sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sapiens GN=WDR17 PE=2 SV=2
Length = 1322
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 17/226 (7%)
Query: 41 SRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSPVGGNAGPFLAQADADG-GLLRDIT 99
SRNG+ ++NV + K ++ T GIF I WS +A +DG ++R I
Sbjct: 457 SRNGAF-IWNVQ-KGKIIQRFNEHGTNGIFCIAWSHKDSKR---IATCSSDGFCIIRTID 511
Query: 100 GEKISS----SMCLCLEWNPSATS-ITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWA 154
G+ + + +W+ + I G D +V + V S + L+ + H +++
Sbjct: 512 GKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFH 571
Query: 155 TSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTG 214
+ + ++ +GSDD WD + G+ IP L++G
Sbjct: 572 VKWSPLREGILCSGSDDGTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPY---LLISG 628
Query: 215 SYDEYLRVWDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAAC 260
S+D ++VWD R + +T G V+ + HP P +A+C
Sbjct: 629 SWDYTIKVWDTREGT--CVDTVYDHGADVYGLTCHPSRP-FTMASC 671
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 44/137 (32%)
Query: 205 PSDSNTLLTGSYDEYLRVWDVRSI----SKPVNETSV-----------CLGGG------- 242
P D N L T S+D ++VWD+ ++ + P NE + C+ GG
Sbjct: 403 PDDPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNGAF 462
Query: 243 VWRIKHHPFIPGL-------------------VLAACMHNGFAVVKVGGEKAEVLETYAK 283
+W ++ I +A C +GF +++ K VL Y K
Sbjct: 463 IWNVQKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSSDGFCIIRTIDGK--VLHKY-K 519
Query: 284 HGSLAYGADWQRGRSSL 300
H + +G DW + +
Sbjct: 520 HPAAVFGCDWSQNNKDM 536
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Query: 111 LEWNPSATSITV-GLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
++W+P I G DG+V I +Q + H + ++ P+++ +GS
Sbjct: 572 VKWSPLREGILCSGSDDGTVRIWDY--TQDACINILNGHTAPVRGLMWNTEIPYLLISGS 629
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
D WD RE + G+ C PS T+ + S D +R+W + ++
Sbjct: 630 WDYTIKVWDTREGTCVDTVYDHGADVYGLTCH---PSRPFTMASCSRDSTVRLWSLTALV 686
Query: 230 KPVN 233
PV
Sbjct: 687 TPVQ 690
>sp|Q8C7V3|UTP15_MOUSE U3 small nucleolar RNA-associated protein 15 homolog OS=Mus
musculus GN=Utp15 PE=2 SV=1
Length = 528
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C + + G DG V + + + L+Q++ H + F H+V +G+
Sbjct: 85 CATFRQDGQLLVAGSEDGVVQLFDI--NGRAPLRQFEGHTKAVHTVDFTADNYHVV-SGA 141
Query: 170 DDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
DD WDI S L F K H V C + + + +TGSYD ++++D R+
Sbjct: 142 DDYTVKLWDIPNSKEILTF---KEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDART-- 196
Query: 230 KPVNETSVCLGGG 242
N+ +C+ G
Sbjct: 197 ---NKNVLCVEHG 206
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 66 TAGIFDIKWSPVGGNAGPFLAQADADGGLLRDITGEKISSSMCLCLEWNPSATSITVGLS 125
+A I+D+ G F+ +++ DG L S+C ++P + G
Sbjct: 303 SAQIYDVD---TGKKVHAFVDESEKDGDLY--------IRSVC----FSPDGNYLATGAE 347
Query: 126 DGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFK 185
D +V + + +++ + HE ++++ + + +GS D K WDI +
Sbjct: 348 DKTVKVWDIHTKKIQ--HTFYGHELDIYSLDYSS-DGRFIVSGSGDKKAKIWDIEKGKCA 404
Query: 186 LAFQNSKI-HKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRS 227
N ++ K GV +A P D + GS D +R+WD ++
Sbjct: 405 FTLGNEEVGPKNGVTSVAMSP-DGRLVAAGSLDNIVRLWDAQT 446
>sp|Q4VBE8|WDR18_MOUSE WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1
Length = 431
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 154 ATSFDVHQPHMVYTGSDDCKFS----GWD-IRESPFKLAFQNSKI---HKMGVCCIASIP 205
+ + D+ + H+ GSD F W +RE F+ K+ H+ V C+ S+
Sbjct: 220 SVTMDLAEHHIFCGGSDGSIFQVDLCSWPGLREHSFQPEQNTGKVFKGHRNQVTCL-SVS 278
Query: 206 SDSNTLLTGSYDEYLRVWDVRS--------ISKPVNETSVCLG 240
+D + LL+GS+DE +R+WDV+S + PV ++ L
Sbjct: 279 TDGSVLLSGSHDESVRLWDVKSKQCLRTVTLKGPVTNAAIILA 321
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 82 GPFLAQADADGGL-LRDITGEKISSSM-------CLCLEWNPSATSITVGLSDGSVSIVS 133
G LA +D + L ++ GE I+ S+ L L W+ + I +D S+ +
Sbjct: 74 GTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWD 133
Query: 134 VVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKI 193
++ E++++ + H + + P +V +GSDD +D R FQ
Sbjct: 134 --SNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ---- 187
Query: 194 HKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPV 232
HK V + S+ L+TG D +RVWD+R+ P+
Sbjct: 188 HKYPVTSVC-FSDASDQLITGGIDNVIRVWDIRNQEDPL 225
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 148 HEFELWATSFDVHQPHMVYTGSDDCKFSGWDIR--ESP-FKLAFQNSKIHKMGVCCIASI 204
H++ + + F ++ TG D WDIR E P + LA I S+
Sbjct: 188 HKYPVTSVCFSDASDQLI-TGGIDNVIRVWDIRNQEDPLYTLASHQDTITS------TSV 240
Query: 205 PSDSNTLLTGSYDEYLRVWDVRSISKP 231
D LL+ S D ++WD+R + P
Sbjct: 241 SKDGAYLLSNSMDNSCKIWDIRPYAPP 267
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 106 SMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMV 165
S CL +N T + G +D V I+ VES E L + AHE ++ S ++
Sbjct: 102 SNIFCLAFNSGNTKVFSGGNDEQV-ILHDVESS-ETLDVF-AHEDAVYGLSVSPVNDNIF 158
Query: 166 YTGSDDCKFSGWDIRES----PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLR 221
+ SDD + WDIRES PF LA S H + P + L T + E +
Sbjct: 159 ASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHS-----VMFNPVEPRLLATANSKEGVG 213
Query: 222 VWDVR 226
+WD+R
Sbjct: 214 LWDIR 218
>sp|Q9FFA7|RUP2_ARATH WD repeat-containing protein RUP2 OS=Arabidopsis thaliana GN=RUP2
PE=1 SV=1
Length = 368
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 12/180 (6%)
Query: 111 LEWNPSATSITVGLSD-GSVSIVSVVESQLEVLQQWKAHEFELWATSFDVH--QPHMVYT 167
L W P + +G D V + +E + V ++ + +W+ + H + +
Sbjct: 105 LRWRPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGAS 164
Query: 168 GSDDCKFSGWDIRESPFKLA--FQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDV 225
GSDD WD R P + + + I + VCC+ PS + G D V+D+
Sbjct: 165 GSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDI 224
Query: 226 RSISKPVNETSVCLGGGVWRIKHHPFIP-GLVLAACMHNGFAVVKVGGEKAEVLETYAKH 284
R + P ++ L G + + F+ G V+ A + V E V+ TY H
Sbjct: 225 RKLVDP----ALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSV--EDGRVIRTYEGH 278
>sp|A6NGE4|DC8L1_HUMAN DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens
GN=DCAF8L1 PE=2 SV=1
Length = 600
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 81/212 (38%), Gaps = 23/212 (10%)
Query: 126 DGSVSIVSVVE-SQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRES-- 182
DG V + ++ S E ++ H + + P+ T +D D+R+
Sbjct: 262 DGQVRVAELINASYCENTKRVAKHRGPAHELALEPDSPYKFLTSGEDAVVFTIDLRQDRP 321
Query: 183 PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSISKPVNETSVCLGGG 242
K+ K+G+ I+ P++ G +D+++R++D R I K N G
Sbjct: 322 ASKVVVTRENDKKVGLYTISMNPANIYQFAVGGHDQFVRIYDQRRIDKKEN-------NG 374
Query: 243 VWRIKHHPFIPGLVLAACMHNGFAVVKVGGEKAEVLETYAK------HGSLAYGADWQRG 296
V + F P ++ V + E+L +Y + SL+ GA + +
Sbjct: 375 VLK----KFTPHHLVYCDFPTNITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQYVK- 429
Query: 297 RSSLEGKRKNSLVATCSFYDRLLRIWMPESDC 328
+G R N + +FY + SDC
Sbjct: 430 --RYKGHRNNDTIKCVNFYGPRSEFVVSGSDC 459
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 106 SMCLCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMV 165
S CL +N T + G +D V I+ VES E L + AHE ++ S ++
Sbjct: 102 SNIFCLAFNSGNTKVFSGGNDEQV-ILHDVESS-ETLDVF-AHEDAVYGLSVSPVNDNIF 158
Query: 166 YTGSDDCKFSGWDIRES----PFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLR 221
+ SDD + WDIRES PF LA S H + P + L T + E +
Sbjct: 159 ASSSDDGRVLIWDIRESPHGEPFCLANYPSAFH-----SVMFNPVEPRLLATANSKEGVG 213
Query: 222 VWDVR 226
+WD+R
Sbjct: 214 LWDIR 218
>sp|Q40153|LE14B_LITER LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1
Length = 473
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 109 LCLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTG 168
++++ I G SD S+ + + +L + + AHE ++ + F H++Y+G
Sbjct: 218 FSIKFSTDGREIVAGTSDESICVYDLEADRLSL--RISAHESDVNSVCFADESGHLIYSG 275
Query: 169 SDDCKFSGWDIRESPFKLAFQNSKI---HKMGVCCIASIPSDSNTLLTGSYDEYLRVWDV 225
SDD WD R F + + I H G+ I S D ++ D+ +++WD+
Sbjct: 276 SDDNLCKVWDRR--CFNAKGKPAGILMGHLEGITFIDS-RGDGRYFISNGKDQTIKLWDI 332
Query: 226 RSIS 229
R +S
Sbjct: 333 RKMS 336
>sp|B0DWM8|YTM1_LACBS Ribosome biogenesis protein YTM1 OS=Laccaria bicolor (strain
S238N-H82 / ATCC MYA-4686) GN=YTM1 PE=3 SV=1
Length = 452
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 169 SDDCKFSGWDIRESPFKL-AFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRS 227
S D + +D+R S L + N+ +H C+A+ ++S+ ++TG+YD +R+WD+RS
Sbjct: 346 STDRSMTLYDLRSSTTILTSASNTYMHPSTPSCVATSATNSHQVVTGAYDGVVRIWDLRS 405
>sp|O22467|MSI1_ARATH Histone-binding protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1
SV=1
Length = 424
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 139 LEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGV 198
L+ Q +KAHE + ++ + ++ + DD WD+R Q+ H M V
Sbjct: 217 LDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEV 276
Query: 199 CCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
C+A P + + TGS D+ ++++D+R +S
Sbjct: 277 NCLAFNPFNEWVVATGSTDKTVKLFDLRKLS 307
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 16/182 (8%)
Query: 146 KAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIP 205
+ H E + S+ + + +GSDD + WDI +P + +I K + +
Sbjct: 175 RGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVA 234
Query: 206 SD-SNTLLTGSY--DEYLRVWDVR--SISKPVNETSVCLGGGVWRIKHHPFIPGLVLAAC 260
+ L GS D+YL +WD+R S SKPV ++ V V + +PF +V
Sbjct: 235 WHLRHEYLFGSVGDDQYLLIWDLRSPSASKPV-QSVVAHSMEVNCLAFNPFNEWVVATGS 293
Query: 261 MHNGFAVVKVGGEKAEVLETYAKHGSLAYGADWQRGRSSLEGKRKNSLVATCSFYDRLLR 320
+ + + + L T+ H + W + +++A+C RL+
Sbjct: 294 TDKTVKLFDL-RKLSTALHTFDSHKEEVFQVGW--------NPKNETILASCCLGRRLM- 343
Query: 321 IW 322
+W
Sbjct: 344 VW 345
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 66 TAGIFDIKWSPVGGNAGPFLAQADADGGL----LRDITGEKISSSMCLCLE---WNPSAT 118
T I +K+SP G FL + AD + + D++ E+ + L + W+ +
Sbjct: 79 TKSISAVKFSPCGK----FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSK 134
Query: 119 SITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWD 178
SI D ++ I V +++ + K H ++ +F+ Q +V +GS D WD
Sbjct: 135 SIVTASDDKTLKIYEV--PTVKMAKTLKGHTNYVFCCNFN-PQSSLVVSGSFDESVRIWD 191
Query: 179 IRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDV 225
+R + + H V + S D + + +GSYD +R+WD
Sbjct: 192 VRTG---MCVKTLPAHSDPVSAV-SFNRDGSLITSGSYDGLVRIWDT 234
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 165 VYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWD 224
+ T SDD I E P + K H V C P S+ +++GS+DE +R+WD
Sbjct: 136 IVTASDDKTLK---IYEVPTVKMAKTLKGHTNYVFCCNFNP-QSSLVVSGSFDESVRIWD 191
Query: 225 VRS 227
VR+
Sbjct: 192 VRT 194
>sp|Q5ZLL7|WDR91_CHICK WD repeat-containing protein 91 OS=Gallus gallus GN=WDR91 PE=2 SV=1
Length = 751
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 110 CLEWNPSATSITVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
C +N + + G +DG V + + Q E WKAH+ E+++ F + + VY+
Sbjct: 571 CTAFNHNGNLLVTGAADGIVRLFDM--QQHECAMSWKAHDGEVYSVEFS-YDENTVYSIG 627
Query: 170 DDCKFSGWDIRESPFKLA 187
+D KF W+I +S K++
Sbjct: 628 EDGKFIQWNIHKSGLKIS 645
>sp|Q7ZW33|UTP15_DANRE U3 small nucleolar RNA-associated protein 15 homolog OS=Danio rerio
GN=utp15 PE=2 SV=1
Length = 517
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 142 LQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCI 201
L+Q+K H + ATSF + V +GSDD WD+ + + + H + I
Sbjct: 115 LRQFKGHSKAVHATSF-LSDGFRVLSGSDDLTCRVWDVASA---VELSSITEHTDYIRAI 170
Query: 202 ASIPSDSNTLLTGSYDEYLRVWDVRS 227
A + + +TGSYD ++++DVRS
Sbjct: 171 APSKLNPDVFVTGSYDHTVKMFDVRS 196
>sp|Q9P783|RRB1_SCHPO Ribosome assembly protein rrb1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rrb1 PE=1 SV=1
Length = 480
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 54 EEKNLELLYRMDTAGIFDIKWSPV------GGNAGPFLAQADADGGLLRDITGEKISSSM 107
E L + R T G + + WSP G NA ++GG D + ++
Sbjct: 235 ENSPLYTVNRHKTEG-YALDWSPFEYSLLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAA 293
Query: 108 CLCLEWNPSATSITVGLS-DGSVSIVSVVESQLEVLQQWKAHE-FELWATSFDVHQPHMV 165
L+W+PS ++ S DG+ I V Q AH ++ S++ P+++
Sbjct: 294 VEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLL 353
Query: 166 YTGSDDCKFSGWDIR----ESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLR 221
TG+D+ +S WD+R S + K H+ + I P++ + + D +
Sbjct: 354 ATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQIS 413
Query: 222 VWDV 225
+WD+
Sbjct: 414 LWDL 417
>sp|Q499N3|WDR18_RAT WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2
SV=1
Length = 431
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 163 HMVYTGSDDCKFSGWDI--RESPFKLAFQNS-------KIHKMGVCCIASIPSDSNTLLT 213
H ++ G D D+ R P + +FQ K H+ V C+ S+ +D + LL+
Sbjct: 228 HYIFCGGSDGSIFQVDLCSRPGPREQSFQPEQNTGKVFKGHRNQVTCL-SVSTDGSILLS 286
Query: 214 GSYDEYLRVWDVRS 227
GS+DE +R+WDV+S
Sbjct: 287 GSHDESVRLWDVKS 300
>sp|P0CS36|HAT2_CRYNJ Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=HAT2 PE=3 SV=1
Length = 435
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 133 SVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSK 192
S + L+ L+ + H + + +M + SDD + WD R A +
Sbjct: 224 SKQDPSLQPLRLYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQ 283
Query: 193 IHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
H + CI+ PS LTGS D + +WD+R +S
Sbjct: 284 GHNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKLS 320
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 61 LYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLL----RDITGEKISSSM------CLC 110
LY +A + D++W P N DG ++ R K SS + C
Sbjct: 235 LYTGHSAYVADVEWHPKNEN---MFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINC 291
Query: 111 LEWNPSATSI-TVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
+ + PS+ + G SD ++++ + + + ++AH ++ S+ P + S
Sbjct: 292 ISFAPSSEYLFLTGSSDNTIALWDLRKLSTK-HHSFEAHTNDVLQLSWSPTSPVHFASAS 350
Query: 170 DDCKFSGWDI------------RESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYD 217
D + WD+ + P +L F + H VC I+ PS T+ + S D
Sbjct: 351 ADRRVHIWDLDAIGAEQTPDDAEDGPPELLFVHGG-HTSKVCDISWSPSSPWTIASASED 409
Query: 218 EYLRVWD 224
L+VW+
Sbjct: 410 NILQVWE 416
>sp|P0CS37|HAT2_CRYNB Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=HAT2 PE=3 SV=1
Length = 435
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 133 SVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSK 192
S + L+ L+ + H + + +M + SDD + WD R A +
Sbjct: 224 SKQDPSLQPLRLYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQ 283
Query: 193 IHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDVRSIS 229
H + CI+ PS LTGS D + +WD+R +S
Sbjct: 284 GHNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKLS 320
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 61 LYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLL----RDITGEKISSSM------CLC 110
LY +A + D++W P N DG ++ R K SS + C
Sbjct: 235 LYTGHSAYVADVEWHPKNEN---MFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINC 291
Query: 111 LEWNPSATSI-TVGLSDGSVSIVSVVESQLEVLQQWKAHEFELWATSFDVHQPHMVYTGS 169
+ + PS+ + G SD ++++ + + + ++AH ++ S+ P + S
Sbjct: 292 ISFAPSSEYLFLTGSSDNTIALWDLRKLSTK-HHSFEAHTNDVLQLSWSPTSPVHFASAS 350
Query: 170 DDCKFSGWDI------------RESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYD 217
D + WD+ + P +L F + H VC I+ PS T+ + S D
Sbjct: 351 ADRRVHIWDLDAIGAEQTPDDAEDGPPELLFVHGG-HTSKVCDISWSPSSPWTIASASED 409
Query: 218 EYLRVWD 224
L+VW+
Sbjct: 410 NILQVWE 416
>sp|Q9BV38|WDR18_HUMAN WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2
Length = 432
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 149 EFELWATSFDVHQPHMVYTGSDDCKFS----GWD-IRESPFKLAFQNSKI---HKMGVCC 200
+ + A + D+ + HM GS+ F W RE F K+ H+ V C
Sbjct: 215 DVSIMAVTMDLAEHHMFCGGSEGSIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTC 274
Query: 201 IASIPSDSNTLLTGSYDEYLRVWDVRS--------ISKPVNETSVCLG 240
+ S+ +D + LL+GS+DE +R+WDV+S + PV ++ L
Sbjct: 275 L-SVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVALKGPVTNAAILLA 321
>sp|Q6C7Q4|HAT2_YARLI Histone acetyltransferase type B subunit 2 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=HAT2 PE=3 SV=1
Length = 452
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 164 MVYTGSDDCKFSGWDIRESPFKLA--FQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLR 221
++ + SDDC WD R+ K A + S+ G+ + P + TGS DE ++
Sbjct: 273 LIGSASDDCTLRLWDTRKPGNKAACTIKESR----GINSLDFNPHSEFLVATGSADETVK 328
Query: 222 VWDVRSISKPVNE 234
VWD+R + P+++
Sbjct: 329 VWDMRKMDTPISQ 341
>sp|Q2UA71|HAT2_ASPOR Histone acetyltransferase type B subunit 2 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=hat2 PE=3 SV=1
Length = 436
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 164 MVYTGSDDCKFSGWDIRESPFKLAFQNSK-IHKMGVCCIASIPSDSNTLLTGSYDEYLRV 222
++ T SDD DIRE+ A +++ H+ + IA P+ L TGS D+ + +
Sbjct: 254 LIGTVSDDITLQILDIREAETTRAAASAEGQHRDAINAIAFNPAAETVLATGSADKSIGL 313
Query: 223 WDVRSISKPVNETSVCLGGGVWRIKHHPFIPGLVLAAC 260
WD+R++ ++ T C V + HPF ++ +A
Sbjct: 314 WDLRNLKTKLH-TLECHTDSVTSLSWHPFEESVLASAS 350
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 41 SRNGSISLFNVNAEEKNLELLYRMDTAGIFDIKWSPVGGNAGPFLAQADADGGLLRDIT- 99
S++ S+ VN + +ELL T F + WSP AG + ++ L D+T
Sbjct: 169 SKHPSLPTGTVNPQ---MELLGH--TKEGFGLSWSP--HTAGHLVTGSEDKTVRLWDLTT 221
Query: 100 ---GEKI---------SSSMCLCLEWNPSATSITVGLSDG-SVSIVSVVESQLE--VLQQ 144
G K SS+ ++++P +S+ +SD ++ I+ + E++
Sbjct: 222 YTKGNKALKPSRTYTHHSSIVNDVQYHPLHSSLIGTVSDDITLQILDIREAETTRAAASA 281
Query: 145 WKAHEFELWATSFDVHQPHMVYTGSDDCKFSGWDIRESPFKLAFQNSKIHKMGVCCIASI 204
H + A +F+ ++ TGS D WD+R K + H V ++
Sbjct: 282 EGQHRDAINAIAFNPAAETVLATGSADKSIGLWDLRN--LKTKLHTLECHTDSVTSLSWH 339
Query: 205 PSDSNTLLTGSYDEYLRVWDV 225
P + + L + SYD + WD+
Sbjct: 340 PFEESVLASASYDRKIMFWDL 360
>sp|C5MJE8|LIS1_CANTT Nuclear distribution protein PAC1 OS=Candida tropicalis (strain
ATCC MYA-3404 / T1) GN=PAC1 PE=3 SV=1
Length = 490
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 115 PSATSITVGLSDGSVSIVSVVESQLEVLQQ-WKAHEFELWATSFDVHQPHMVYTGSDDCK 173
P+ + G +DG++ I ++ + ++ KAH + F +P+ + T S D
Sbjct: 130 PNLPLVFNGCNDGNLYIWNLTNDDNTIPEKRIKAHTRSINKMCFSYRKPYYLATCSSDLT 189
Query: 174 FSGWDIRESPFKLAFQNSKIHKMGVCCIASIPSDSNTLLTGSYDEYLRVWDV 225
WD + + + H+ V + PSDSN L + S D+ +RVWD+
Sbjct: 190 IKIWDEKFNHIRTL----NGHEHTVSSVKFSPSDSNILYSVSRDKNIRVWDI 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,834,811
Number of Sequences: 539616
Number of extensions: 5252495
Number of successful extensions: 14849
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 442
Number of HSP's that attempted gapping in prelim test: 13598
Number of HSP's gapped (non-prelim): 1509
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)