BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020108
(331 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/290 (84%), Positives = 267/290 (92%), Gaps = 6/290 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSL+N TE+E + E++ QEPIL EQNQRFCMFPIRYK++WEMYKKA+ASFWTA
Sbjct: 1 MGSLRNGTESERIR------EEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTA 54
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS+D+Q WE L DSEKHFISHVLAFFAASDGIVLENLAARFL D+QIPEARAFYGF
Sbjct: 55 EEVDLSRDMQQWEALSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGF 114
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLETYIKDS+EKHRLFNAIENIPCVA+KAKWALDWI SS FAERL
Sbjct: 115 QIAMENIHSEMYSLLLETYIKDSREKHRLFNAIENIPCVAEKAKWALDWIQSSMVFAERL 174
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FAC+EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+++LH
Sbjct: 175 VAFACIEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQRQLH 234
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
WQKV+H+V EAVEIET+FVCEALPCALIGMN++LM YIKFVADRLLV +
Sbjct: 235 WQKVYHIVGEAVEIETKFVCEALPCALIGMNATLMGDYIKFVADRLLVAL 284
>gi|388508294|gb|AFK42213.1| unknown [Lotus japonicus]
Length = 351
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/294 (82%), Positives = 268/294 (91%), Gaps = 5/294 (1%)
Query: 1 MGSLKNETENEVNQRE----QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
MGSL+N + +++ Q E E E QEPILMEQ QRFCMFPIRYKQVWEMYKKAQAS
Sbjct: 1 MGSLENGPARKETKQQLVPAQTEHEHE-QEPILMEQTQRFCMFPIRYKQVWEMYKKAQAS 59
Query: 57 FWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
FWTAEEVDL+ DVQHW L +SEKHFI+HVLAFFAASDGIVLENLAARFLND+QIPEARA
Sbjct: 60 FWTAEEVDLTYDVQHWATLSNSEKHFITHVLAFFAASDGIVLENLAARFLNDVQIPEARA 119
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
FYGFQIAMENIHSEMYSLLLET IKDS+EKHRLFNAIEN+PCVA+KA+WAL+WI+SS SF
Sbjct: 120 FYGFQIAMENIHSEMYSLLLETLIKDSREKHRLFNAIENLPCVARKAEWALNWINSSTSF 179
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236
AERLV FAC+EGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+
Sbjct: 180 AERLVAFACIEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQ 239
Query: 237 KRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ L ++VHH+VHEAVEIET+FVCEALPCALIGMNS+LMSQYIKFVADRLLV +
Sbjct: 240 RPLDSERVHHIVHEAVEIETEFVCEALPCALIGMNSTLMSQYIKFVADRLLVSL 293
>gi|225432510|ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
[Vitis vinifera]
Length = 340
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/290 (84%), Positives = 265/290 (91%), Gaps = 7/290 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSL N +++R EQE+E PILM+ +QRFCMFPIRY+Q+WEMYKKA+ASFWTA
Sbjct: 1 MGSLTNG----IDKRPDEEQEEE---PILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQ WE L +SEKHFISHVLAFFAASDGIVLENLAARFL+DIQIPEARAFYGF
Sbjct: 54 EEVDLSHDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGF 113
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE+I CVA KAKWALDWI SS FAERL
Sbjct: 114 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALDWIQSSTLFAERL 173
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
+ FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L
Sbjct: 174 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP 233
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
WQKVHH+VHEAVEIETQFVCEALPCALIGMN++LMSQYIKFVADRLLV +
Sbjct: 234 WQKVHHIVHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLVAL 283
>gi|351721787|ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
Length = 339
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/290 (83%), Positives = 265/290 (91%), Gaps = 9/290 (3%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSL+N N V++ +++QEPILMEQ+QRFCMFPIRYKQ+WEMYKKA+ASFWTA
Sbjct: 1 MGSLEN---NGVDK------ARDEQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTA 51
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQHWE L SEKHFI+HVLAFFAASDGIVLENLAARFL+D+QIPEARAFYGF
Sbjct: 52 EEVDLSYDVQHWETLSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGF 111
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLETYIKDS+EKH+LFNAIEN+PCVA+KA+WAL WIHSS SFAERL
Sbjct: 112 QIAMENIHSEMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERL 171
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK L
Sbjct: 172 VAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLI 231
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+VH +VHEAVEIET+FVC+ALPCALIGMNS LMSQYIKFVADRLLV +
Sbjct: 232 SDQVHKLVHEAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADRLLVAL 281
>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 342
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/264 (89%), Positives = 250/264 (94%)
Query: 27 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHV 86
PIL EQNQRFCMFPIRYK +WEMYKKA+ASFWTAEEVDLSQDVQ WE L SEKHFISHV
Sbjct: 21 PILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLSQDVQQWETLSVSEKHFISHV 80
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIVLENLAARFLNDIQ+PEARAFYGFQIAMENIHSEMYSLLLETYIKDS+EK
Sbjct: 81 LAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREK 140
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
+RLFNAIE IPCVA+KAKWALDWIHSS +AERLV FACVEGIFFSGSFCAIFWLKKRGL
Sbjct: 141 NRLFNAIETIPCVARKAKWALDWIHSSSLYAERLVAFACVEGIFFSGSFCAIFWLKKRGL 200
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
MPGLTFSNELISRDEGLHCDFACLLYSLL+K+L WQKV +VHEAVEIET+FVC+ALPCA
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQWQKVQQIVHEAVEIETEFVCDALPCA 260
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS+LMSQYIKFVADRLLV +
Sbjct: 261 LIGMNSTLMSQYIKFVADRLLVAL 284
>gi|15229476|ref|NP_189000.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
thaliana]
gi|27735240|sp|P50651.2|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
AltName: Full=Ribonucleoside-diphosphate reductase R2A
subunit; Short=AtRNR2; Short=Protein R2at; AltName:
Full=Ribonucleotide reductase small subunit A
gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
thaliana]
Length = 341
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/290 (81%), Positives = 257/290 (88%), Gaps = 7/290 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSLK E + E+GE E EP+LM QNQRF MFPIRYK +WEMYKKA+ASFWTA
Sbjct: 1 MGSLK---EGQGRDMEEGESE----EPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQ WE L DSEKHFISH+LAFFAASDGIVLENLAARFLND+Q+PEARAFYGF
Sbjct: 54 EEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGF 113
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLET+IKDSKEK RLFNAIE IPC+++KAKW LDWI S SFA RL
Sbjct: 114 QIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRL 173
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L
Sbjct: 174 VAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP 233
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+KV+ +VHEAVEIET+FVC+ALPC LIGMNS+LMSQYI+FVADRLLV +
Sbjct: 234 LEKVYQIVHEAVEIETEFVCKALPCDLIGMNSNLMSQYIQFVADRLLVTL 283
>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/290 (80%), Positives = 256/290 (88%), Gaps = 7/290 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSLK +++ E E +EP+LM QNQRF MFPIRYK +WEMYKKA+ASFWTA
Sbjct: 1 MGSLKESQRRDMD-------EDESKEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQ WE L DSEKHFISHVLAFFAASDGIVLENLAARFLND+Q+PEARAFYGF
Sbjct: 54 EEVDLSTDVQQWEALTDSEKHFISHVLAFFAASDGIVLENLAARFLNDVQVPEARAFYGF 113
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLET++KDSKEK RLFNAIE IPC+++KAKW LDWI S SFA RL
Sbjct: 114 QIAMENIHSEMYSLLLETFLKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRL 173
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L
Sbjct: 174 VAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP 233
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+KV+ +VHEAVEIET+FVC+ALPC LIGMNS+LMSQYI+FVADRLLV +
Sbjct: 234 LEKVYQIVHEAVEIETEFVCKALPCDLIGMNSNLMSQYIQFVADRLLVTL 283
>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
Length = 340
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/290 (79%), Positives = 252/290 (86%), Gaps = 8/290 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSLK E + E+GE E EP+LM QNQRF MFPIRYK +WEMYKKA+ASFWTA
Sbjct: 1 MGSLK---EGQGRDMEEGESE----EPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQ WE L DSEKHFISH+LAFFAASDGIVLENLA RFLND+Q+PEARAFYGF
Sbjct: 54 EEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLA-RFLNDVQVPEARAFYGF 112
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLET+IKDSKEK RLFNAIE IPC+++KAKW LDWI S SFA RL
Sbjct: 113 QIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRL 172
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FAC EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL SLL+ +
Sbjct: 173 VAFACAEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLISLLQLHVP 232
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+KV+ +VHEAVEIET+FVC+ALPC LIGMNS+LMSQYI+FVADRLLV +
Sbjct: 233 LEKVYQIVHEAVEIETEFVCKALPCDLIGMNSNLMSQYIQFVADRLLVTL 282
>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
Length = 312
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/240 (91%), Positives = 229/240 (95%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEEVDLS DVQ WE L +SEKHFISHVLAFFAASDGIVLENLAARFL+D
Sbjct: 1 MYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHD 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE+I CVA KAKWALD
Sbjct: 61 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALD 120
Query: 169 WIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 228
WI SS FAERL+ FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 180
Query: 229 CLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
CLLYSLL+K+L WQKVHH+VHEAVEIETQFVCEALPCALIGMN++LMSQYIKFVADRLLV
Sbjct: 181 CLLYSLLQKQLPWQKVHHIVHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLV 240
>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
Length = 347
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/272 (78%), Positives = 238/272 (87%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EPIL + QRFCMFPIRY +VWEMYKKA+ASFWTAEEVDLSQD +HWE L D+EKHF+S
Sbjct: 23 EEPILADNPQRFCMFPIRYPRVWEMYKKAEASFWTAEEVDLSQDAKHWESLTDNEKHFVS 82
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ +IQIPEARAFYGFQIA+ENIHSEMYSLLLETYIKD++
Sbjct: 83 HVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDNE 142
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K +LFNAIE IPCVA+KA WAL WI SS SFAER+V FACVEGIFFSGSFCAIFWLKKR
Sbjct: 143 VKAKLFNAIETIPCVAKKADWALRWIDSSQSFAERIVAFACVEGIFFSGSFCAIFWLKKR 202
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLL +L ++V +V +AVEIE QFVCEAL
Sbjct: 203 GLMPGLTFSNELISRDEGLHCDFACLLYSLLNVKLDEKRVKEIVSDAVEIERQFVCEALS 262
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
C L+GMN+ LMSQYI FVADRL+V + LF
Sbjct: 263 CDLVGMNARLMSQYIDFVADRLMVVLGYNKLF 294
>gi|356571527|ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 329
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/263 (78%), Positives = 236/263 (89%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD++HW+ L D E+HF++
Sbjct: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGERHFVT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF +IQ+PEARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+K+ LF AI+ IPCVA+KA+WAL WI SSDSFAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 QKNHLFRAIDTIPCVAKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR++L ++V +V +AV+IE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVRDAVDIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMSQYI+FVADRLL
Sbjct: 246 CALVGMNGDLMSQYIEFVADRLL 268
>gi|356558708|ref|XP_003547645.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 330
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/263 (78%), Positives = 234/263 (88%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD++HW+ L D E+HF+S
Sbjct: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGERHFVS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF +IQIPEARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFTKEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDSS 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+K LF AI+ IPCV +KA+WAL WI SSDSFAERLV FACVEGIFFSGSFCA+FWLKKR
Sbjct: 126 QKSHLFRAIDTIPCVTKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAVFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR++L ++V +V +AV+IE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVKDAVDIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMSQYI+FVADRLL
Sbjct: 246 CALVGMNGDLMSQYIEFVADRLL 268
>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 325
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/267 (78%), Positives = 234/267 (87%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+QEPIL E RFCMFPI+Y QVWEMYKKA+ASFWTAEEVDLS D++HWE L D+E+HFI
Sbjct: 2 EQEPILAENPGRFCMFPIKYPQVWEMYKKAEASFWTAEEVDLSADLKHWEALTDNERHFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA RF+ +IQIPEARAFYGFQIA+ENIHSEMYSLLLE YIKD
Sbjct: 62 SHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDQ 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EKHRLFNAIE IPCV +KA+WAL WI SS SFAER++ FACVEGIFFSGSFC+IFWLKK
Sbjct: 122 SEKHRLFNAIETIPCVTRKAEWALKWIDSSGSFAERILAFACVEGIFFSGSFCSIFWLKK 181
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY+LL +L +VH +V EAV+IE +FVCEAL
Sbjct: 182 RGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLSEDRVHEIVCEAVDIEREFVCEAL 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
C L+GMN +MS+YI FVADRLLV +
Sbjct: 242 SCDLVGMNKIMMSEYIDFVADRLLVSL 268
>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/263 (78%), Positives = 235/263 (89%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L E RFCMFPI+Y +WEMYKKA+ASFWTAEEVDLS D++HWE L EKHFIS
Sbjct: 6 EEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDIRHWENLTPDEKHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSE 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AIE +PCVA+KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFHAIETVPCVAKKARWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMSQYI+FVADRLL
Sbjct: 246 CALVGMNGELMSQYIEFVADRLL 268
>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/266 (78%), Positives = 233/266 (87%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EPILME RF MFPI+Y QVWEMYKKA+ASFWTAEEVDLS D +HWE L D+E+HFIS
Sbjct: 6 EEPILMENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWEALTDNERHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ +IQIPEARAFYGFQIA+ENIHSEMYSLLLE YIKD
Sbjct: 66 HVLAFFAASDGIVLENLAIRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDHA 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLFNAIE IPCV +KA+WAL WIHS+ SFAER++ FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFNAIETIPCVTKKAEWALKWIHSAGSFAERILAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLY+LL +L +V+ +V EAV IE +FVCEAL
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLSEDRVYEIVCEAVVIEQEFVCEALS 245
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
C L+GMN +LMS+YI FVADRLLV +
Sbjct: 246 CDLVGMNKTLMSEYIDFVADRLLVSL 271
>gi|356505372|ref|XP_003521465.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 329
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/263 (77%), Positives = 233/263 (88%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+E +L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD++HW L D E+HFI+
Sbjct: 6 EERLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGERHFIT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF +IQ+PEARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETYIKDST 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF AI IPC+ +KA+WAL WI +S+SFAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +V +AVEIE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMS+YI+FVADRLL
Sbjct: 246 CALVGMNGELMSRYIEFVADRLL 268
>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 329
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/263 (76%), Positives = 235/263 (89%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDLSQD++HWE L EKHFIS
Sbjct: 6 EEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDEKHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AIE +PC+A+KA+WAL WI S+SFAER++ FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFHAIETVPCIAKKAEWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL+YSLL+K+L ++V +V +AV IE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLIYSLLKKKLSEERVKGIVRDAVNIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMSQYI+FVADRLL
Sbjct: 246 CALVGMNGELMSQYIEFVADRLL 268
>gi|388503744|gb|AFK39938.1| unknown [Medicago truncatula]
Length = 330
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/263 (77%), Positives = 232/263 (88%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDLS D++HW+ L D E+HFIS
Sbjct: 6 EEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWQNLTDGERHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ +IQ+ EARAFYGFQIA+ENIHSEMYSLLLETYI DS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETYISDSA 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AIE IPC+A+KA WA+ WI SSDSFAER+V FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +V +AVEIE +FVC LP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSSERVKEIVCDAVEIEREFVCHTLP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMS YI+FVADRLL
Sbjct: 246 CALVGMNGGLMSTYIEFVADRLL 268
>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 331
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/268 (77%), Positives = 232/268 (86%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+ +EPIL+E RF MFPI+Y QVWEMYKKA+ASFWTAEEVDLS D +HWE L D E+HF
Sbjct: 5 DQKEPILVENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWETLTDDERHF 64
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIVLENLA RF+ +IQIPEARAFYGFQIA+ENIHSEMYSLLLE YIKD
Sbjct: 65 ISHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKD 124
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK RLFNAIE IPCVA+KA WAL WI S+ SFAER++ FACVEGIFFSGSFCAIFWLK
Sbjct: 125 QAEKSRLFNAIETIPCVARKADWALKWIDSAGSFAERILAFACVEGIFFSGSFCAIFWLK 184
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACLLY+LL +L ++V+ +V EAVEIE +FVCEA
Sbjct: 185 KRGLMPGLTFSNELISRDEGLHCDFACLLYTLLINKLSEERVYEIVCEAVEIEREFVCEA 244
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
L C L+GMN LMS+YI FVADRLLV +
Sbjct: 245 LSCDLVGMNKILMSEYIDFVADRLLVSL 272
>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/263 (77%), Positives = 232/263 (88%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L E RFCMFPI+Y +WEMYKKA+ASFWTAEEVDLS DV HWE L EKHFIS
Sbjct: 6 EEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDVGHWENLTPDEKHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLEN+A RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDST 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AIE +PCVA+KA+WAL WI +SFAERL+ FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +V EAV+IE +FV ++LP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGIVKEAVDIEREFVVDSLP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMSQYI+FVADRLL
Sbjct: 246 CALVGMNGELMSQYIEFVADRLL 268
>gi|225451453|ref|XP_002269951.1| PREDICTED: ribonucleoside-diphosphate reductase small chain [Vitis
vinifera]
gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
Length = 329
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/263 (76%), Positives = 235/263 (89%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y +VWEMYKKA+ASFWTAEEVDLSQD + WE L EKHFIS
Sbjct: 6 EEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWENLTSDEKHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+YIKD K
Sbjct: 66 HILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDPK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AI+ IPCVA+KA+WAL WI S++FAERL+ FACVEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKNRLFHAIDTIPCVAKKAQWALRWIDGSETFAERLLAFACVEGIFFSGSFCSIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR +L ++V +V ++V+IE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKAIVADSVDIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMNS+LMSQYI+FVADRLL
Sbjct: 246 CALVGMNSALMSQYIEFVADRLL 268
>gi|449455910|ref|XP_004145693.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Cucumis sativus]
Length = 329
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/263 (75%), Positives = 230/263 (87%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD +HW+ L EKHFI+
Sbjct: 6 DEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDEKHFIT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ E RAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AI+ +PCV +KA WAL WI S++SFAER++ FACVEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L+ +V +V EAV IE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
AL+GMN LMSQYI+FVADRL+
Sbjct: 246 VALVGMNGDLMSQYIEFVADRLV 268
>gi|1710401|sp|P49730.1|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleoside-diphosphate reductase R2
subunit; AltName: Full=Ribonucleotide reductase small
subunit
gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
Length = 329
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/263 (76%), Positives = 228/263 (86%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y Q+WEMYKKA ASFWTAEEVDLS D +HWE L E+HFI+
Sbjct: 6 EEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFIT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+YIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSD 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLF A+E PCV +KAKWAL WI S++FAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR +L ++V +V +AVEIE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMS+YI+FVADRLL
Sbjct: 246 CALVGMNGDLMSKYIEFVADRLL 268
>gi|449492913|ref|XP_004159139.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Cucumis sativus]
Length = 329
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/263 (75%), Positives = 229/263 (87%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD +HW+ L EKHFI+
Sbjct: 6 DEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDEKHFIT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ + Q+ E RAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEXQVAEVRAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AI+ +PCV +KA WAL WI S++SFAER++ FACVEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L+ +V +V EAV IE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
AL+GMN LMSQYI+FVADRL+
Sbjct: 246 VALVGMNGDLMSQYIEFVADRLV 268
>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
Length = 394
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/266 (72%), Positives = 230/266 (86%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L E RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDL D++HWE+L D E+HFIS
Sbjct: 73 EEPLLDENPDRFCMFPIKYPQIWEMYKKAEASFWTAEEVDLGDDMKHWEKLSDGERHFIS 132
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+PEARAFYGFQ+A+ENIHSEMYSLLLE+YIKD +
Sbjct: 133 HVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLESYIKDPQ 192
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EKH+LF++IE +PC+ +KA+WA+ WI S F+ERLV FA VEGIFFSGSFC+IFWLKKR
Sbjct: 193 EKHKLFHSIETVPCIKKKAQWAMKWIGSDSVFSERLVAFAAVEGIFFSGSFCSIFWLKKR 252
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFAC+L+S+L R+ +V ++ EAVEIE +F EALP
Sbjct: 253 GLMPGLTFSNELISRDEGLHCDFACMLFSMLNTRIDETRVKQIIVEAVEIEQEFCTEALP 312
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS LM+QYI+FVADRLLV +
Sbjct: 313 VDLIGMNSRLMAQYIQFVADRLLVSL 338
>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
Length = 400
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 230/271 (84%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+ D EP+L E RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDL D++HWE+L D E
Sbjct: 74 KSMRDPEPLLDENPDRFCMFPIKYPKIWEMYKKAEASFWTAEEVDLGDDMKHWEKLSDGE 133
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFISHVLAFFAASDGIVLENLA RF+ ++Q+PEARAFYGFQ+A+ENIHSEMYSLLLETY
Sbjct: 134 RHFISHVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLETY 193
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
IKD EKH+LF++IE +PC+ +KA+WA+ WI S SF ERLV FA VEGIFFSGSFC+IF
Sbjct: 194 IKDPIEKHKLFHSIETVPCIKKKAQWAIKWIGSESSFPERLVAFAAVEGIFFSGSFCSIF 253
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY +L K+L ++ ++ EAV+IE +F
Sbjct: 254 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGMLSKQLEESRIKEIICEAVDIENEFC 313
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 314 TDALPVDLIGMNSRLMAQYIEFVADRLLVAL 344
>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/267 (74%), Positives = 232/267 (86%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFI 83
+EPIL RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L + E+HFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLSNDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCV +KA+WA+ WI+ S SFAER+V FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL+YSLLR +L +++ +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEERLKSIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PCAL+GMN LMSQYI+FVADRLL +
Sbjct: 246 PCALVGMNRELMSQYIEFVADRLLTAL 272
>gi|75224904|sp|Q6Y657.1|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
chain B; AltName: Full=Ribonucleoside-diphosphate
reductase R2B subunit; AltName: Full=Ribonucleotide
reductase small subunit B
gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
Length = 333
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/267 (74%), Positives = 231/267 (86%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L + E+HFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCV +KA+WA+ WI+ S SFAER+V FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL+YSLLR +L ++ +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PCAL+GMN LMSQYI+FVADRLL +
Sbjct: 246 PCALVGMNRELMSQYIEFVADRLLAAL 272
>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
Length = 335
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/282 (69%), Positives = 233/282 (82%), Gaps = 1/282 (0%)
Query: 19 EQEQED-QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
EQ ED QEP+L + RF MFPI+Y+ +WEMYKKA+ASFWTAEEVDL DV+ WERL D
Sbjct: 6 EQSLEDSQEPLLASNDDRFVMFPIKYRDIWEMYKKAEASFWTAEEVDLGSDVKDWERLSD 65
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HF+SHVLAFFAASDGIV ENL ARF+ ++Q+PEARAFYGFQIAMENIHSEMYSLLLE
Sbjct: 66 DERHFVSHVLAFFAASDGIVNENLGARFMQEVQVPEARAFYGFQIAMENIHSEMYSLLLE 125
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
YIKD KEK +LF+AI+ +P V +KA WAL WI+ SD F+ERL+ FACVEGIFFSGSFC+
Sbjct: 126 AYIKDPKEKDKLFHAIDTVPVVRKKAHWALKWINGSDLFSERLIAFACVEGIFFSGSFCS 185
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + RL ++V +V +AVEIE +
Sbjct: 186 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYRHIHNRLSEERVAEIVTQAVEIEKE 245
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
F+C+ALP LIGMNS LM QYI+FVADRLLV + ++ ++
Sbjct: 246 FICDALPVDLIGMNSRLMGQYIEFVADRLLVALGNPKVYNVS 287
>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
gi|194704028|gb|ACF86098.1| unknown [Zea mays]
gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|223943167|gb|ACN25667.1| unknown [Zea mays]
gi|414586551|tpg|DAA37122.1| TPA: Ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/276 (71%), Positives = 229/276 (82%), Gaps = 1/276 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHFI 83
QEP+L E + RF MFPIRY Q+WE YKKA ASFWTAEEVDLS D +HW+ L E+HFI
Sbjct: 14 QEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AIE +P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 TEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
P AL+GMN LMSQYI+FVADRLL+ + ++ +A
Sbjct: 254 PVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVA 289
>gi|212274629|ref|NP_001130908.1| uncharacterized protein LOC100192012 [Zea mays]
gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/276 (71%), Positives = 228/276 (82%), Gaps = 1/276 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHFI 83
QEP+L E + RF MFPIRY Q+WE YKKA ASFWTAEEVDLS D +HW+ L E+HFI
Sbjct: 14 QEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQAAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AIE +P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 TEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
P AL+GMN LMSQYI+FVADRLL+ + ++ +A
Sbjct: 254 PVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVA 289
>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
Length = 339
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/276 (71%), Positives = 230/276 (83%), Gaps = 1/276 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHFI 83
+EP+L E + RF MFPIR+ Q+WE YKKA ASFWTAEEVDLS D +HW+ L E+HFI
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AIE +P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 AEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
P AL+GMN +LMSQYI+FVADRLL+ + ++ +A
Sbjct: 254 PVALVGMNGALMSQYIEFVADRLLMALGHKKMYNVA 289
>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
Length = 345
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/289 (68%), Positives = 233/289 (80%), Gaps = 5/289 (1%)
Query: 12 VNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQH 71
V R G+ E EP+L E + RF MFPIRY Q+WE YKKA ASFWTAEEVDLS D +H
Sbjct: 11 VPARGGGDME----EPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 66
Query: 72 WERLLD-SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W+ L E+HF+SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSE
Sbjct: 67 WDAALSPDERHFVSHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 126
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIF 190
MYSLLLETYI+D EK RLF AI+ +P V +KA WA+ WI + FAERLV FACVEGIF
Sbjct: 127 MYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 186
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHE 250
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +
Sbjct: 187 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVAD 246
Query: 251 AVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
AV+IE +FVC+ALP AL+GMN LMSQYI+FVADRLL+ + ++ +A
Sbjct: 247 AVDIEREFVCDALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVA 295
>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
Japonica Group]
Length = 339
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/276 (71%), Positives = 230/276 (83%), Gaps = 1/276 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHFI 83
+EP+L E ++RF MFPIRY Q+WE YKKA ASFWTAEEVDLS D +HW+ L E+HFI
Sbjct: 14 EEPLLAESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AI+ +P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 AEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDEARVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
P AL+GMN LMSQYI+FVADRLL+ + ++ +A
Sbjct: 254 PVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVA 289
>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
Japonica Group]
gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
Length = 345
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/289 (68%), Positives = 233/289 (80%), Gaps = 5/289 (1%)
Query: 12 VNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQH 71
V R G+ E EP+L E + RF MFPIRY Q+WE YKKA ASFWTAEEVDLS D +H
Sbjct: 11 VPARGGGDME----EPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 66
Query: 72 WERLLD-SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W+ L E+HF+SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSE
Sbjct: 67 WDAALSPDERHFVSHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 126
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIF 190
MYSLLLETYI+D EK RLF AI+ +P V +KA WA+ WI + FAERLV FACVEGIF
Sbjct: 127 MYSLLLETYIRDDVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 186
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHE 250
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +
Sbjct: 187 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVAD 246
Query: 251 AVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
AV+IE +FVC+ALP AL+GMN LMSQYI+FVADRLL+ + ++ +A
Sbjct: 247 AVDIEREFVCDALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVA 295
>gi|357124601|ref|XP_003563986.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Brachypodium distachyon]
Length = 339
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/267 (71%), Positives = 228/267 (85%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFI 83
+EP+L E + RF MFPIR+ Q+WE YKKA ASFWTAEEVDLS D +HW+ L + E+HF+
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFV 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLL+ETYI++
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRED 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF A++ IP V +KA+WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 VEKDRLFRAVDTIPAVRRKAEWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY +LR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRSKLDESRVREIVGDAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PCAL+GMN LMSQYI+FVADRLL+ +
Sbjct: 254 PCALVGMNGDLMSQYIEFVADRLLMAL 280
>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
Length = 339
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/267 (73%), Positives = 225/267 (84%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
+EP+L E + RF MFPIR+ Q+WE YKKA ASFWTAEEVDLS D +HW E L E+HFI
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDEALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDD 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AI+ +P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 AEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYELLRSKLDEARVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P AL+GMN LMSQYI+FVADRLL+ +
Sbjct: 254 PVALVGMNGGLMSQYIEFVADRLLMAL 280
>gi|384251981|gb|EIE25458.1| ribonucleotide reductase [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/268 (73%), Positives = 224/268 (83%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L E RFCMFPI+Y VWEMYKKA+ASFWTAEEVDLS D W +L EKHF+S
Sbjct: 8 HEPLLAENPDRFCMFPIKYSAVWEMYKKAEASFWTAEEVDLSSDYTDWMKLSSDEKHFVS 67
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFA+SDGIVLENL+ RF+++IQIPEARAFYGFQIA+ENIHSEMYSLLLETYIKD K
Sbjct: 68 HILAFFASSDGIVLENLSQRFMSEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDPK 127
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EKHRLF+A+E +P V +KA+WAL W+ S SFAERLV + CVEGIFFSGSFC+IFWLKKR
Sbjct: 128 EKHRLFHAMETVPAVKRKAEWALKWVGSQSSFAERLVAWGCVEGIFFSGSFCSIFWLKKR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLM GLTFSNELISRDEGLHCDFACLLY+LL +L K+ ++ EAV+IE FVCEALP
Sbjct: 188 GLMHGLTFSNELISRDEGLHCDFACLLYTLLNNKLDDDKLLSIITEAVDIEKDFVCEALP 247
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQ 292
LIGMN LMS+YI FVADRLLV + Q
Sbjct: 248 VDLIGMNKKLMSEYIDFVADRLLVALGQ 275
>gi|357111351|ref|XP_003557477.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
isoform 1 [Brachypodium distachyon]
gi|357111353|ref|XP_003557478.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
isoform 2 [Brachypodium distachyon]
Length = 336
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/267 (71%), Positives = 225/267 (84%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
+EP+L E + RF MFPIRY Q+WE YKKA ASFWTAEEVDLS D +HW E L E+HFI
Sbjct: 11 EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSSDARHWDETLSPDERHFI 70
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D+
Sbjct: 71 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDA 130
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF A++ +P V +KA W++ WI + FAERLV FACVEGIFFSGSFCAIFWLKK
Sbjct: 131 AEKDRLFRAVDTVPAVRRKAVWSMRWIEGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 190
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LL +L +V +V +AV+IE +F+C+AL
Sbjct: 191 RGLMPGLTFSNELISRDEGLHCDFACLLYELLNGKLEESRVREIVADAVDIEREFICDAL 250
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PCAL+GMN+ LM QYI+FVADRLL +
Sbjct: 251 PCALVGMNAGLMGQYIEFVADRLLTAL 277
>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 329
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/270 (71%), Positives = 226/270 (83%), Gaps = 5/270 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +QRF MFPI+Y QVWEMYKKA+ASFWTAEEVDLS D++HWE L EKHF+SH
Sbjct: 8 EPLLDENDQRFTMFPIQYPQVWEMYKKAEASFWTAEEVDLSDDMKHWETLTKDEKHFVSH 67
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIVLENL RF+ ++QIPEARAFYGFQIA+ENIHSEMYSLL++ YIKD E
Sbjct: 68 VLAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDQYIKDPVE 127
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LF AI+ IPCV +KA WAL WI SSDSFAERL+ FAC+EGIFFSGSFC+I+WLKKRG
Sbjct: 128 KDHLFRAIDTIPCVKKKADWALKWIDSSDSFAERLLAFACIEGIFFSGSFCSIYWLKKRG 187
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLH DFACLL+S+L + + + +V EAVEIE +FVC++LPC
Sbjct: 188 LMPGLTFSNELISRDEGLHRDFACLLFSMLNNKPSEETIRKIVTEAVEIEKEFVCDSLPC 247
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSL 295
AL+GMN+ +MS YI++VAD L CSL
Sbjct: 248 ALVGMNAGMMSDYIEYVADHLF-----CSL 272
>gi|413953641|gb|AFW86290.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/267 (72%), Positives = 224/267 (83%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
+EP+L E + RF MFPIR+ Q+WE YKKA ASFWTAEEVDLS D +HW E L E+HFI
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDEALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF+ D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDH 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AI+ +P V +KA WA+ WI + FAER+V FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 VEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYELLRNKLDEARVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P AL+GMN LMSQYI+FVADRLL+ +
Sbjct: 254 PVALVGMNGDLMSQYIEFVADRLLMAL 280
>gi|412991446|emb|CCO16291.1| Ribonucleoside-diphosphate reductase small chain, putative
[Bathycoccus prasinos]
Length = 330
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/272 (70%), Positives = 227/272 (83%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQ-NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
EQ+ EP+L + N RF +FP++Y VWEMYKKAQASFWTAEEVDL D++HWE+L
Sbjct: 4 DEQQLAEPLLDDGGNDRFVLFPLKYDAVWEMYKKAQASFWTAEEVDLQDDMKHWEKLTAD 63
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFISHVLAFFAASDGIVLENL RF+ +IQIPEARAFYGFQIA+ENIHSEMYSLL++
Sbjct: 64 EKHFISHVLAFFAASDGIVLENLGVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLIDQ 123
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD EK RLFNA++ IPCV +KA+WAL WI S+SFAERLV FACVEGIFFSGSFC+I
Sbjct: 124 YIKDPVEKTRLFNAVDTIPCVQKKAQWALKWIDGSESFAERLVAFACVEGIFFSGSFCSI 183
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
+WLKKRG+MPGLTFSNELISRDEGLH DFACLLY++L +K+ +V EAVEIE +F
Sbjct: 184 YWLKKRGMMPGLTFSNELISRDEGLHRDFACLLYTMLNNTPGEEKLRKIVTEAVEIEKEF 243
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
VC+ALPCAL+GMN+ +M YI++VAD LL +
Sbjct: 244 VCDALPCALVGMNADMMRDYIEYVADHLLSQL 275
>gi|212723480|ref|NP_001131892.1| uncharacterized protein LOC100193273 [Zea mays]
gi|194692834|gb|ACF80501.1| unknown [Zea mays]
gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|413944298|gb|AFW76947.1| Ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/266 (72%), Positives = 224/266 (84%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFIS 84
EP+L E + RF MFPIR+ Q+WE YKKA ASFWTAEEVDLS D +HW E L E+HFIS
Sbjct: 15 EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDEALSPDERHFIS 74
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 75 HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDV 134
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLF AI+ +P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 135 EKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKR 194
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLY +LR +L +V +V +AV+IE +FVC+ALP
Sbjct: 195 GLMPGLTFSNELISRDEGLHCDFACLLYDVLRSKLDEARVRTIVADAVDIEREFVCDALP 254
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+L+GMN LMSQYI+FVADRLL+ +
Sbjct: 255 VSLVGMNGDLMSQYIEFVADRLLMAL 280
>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
Length = 335
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 221/262 (84%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF MFPI+Y +WEMYKKA+ASFWTAEEVDLS D+ HW +L + EKHFI H
Sbjct: 15 EPLLDPNDDRFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMVHWNKLNNDEKHFIKH 74
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIVLENL RF+ ++Q PEARAFYGFQIA+ENIHSEMYSLL++ Y+KD++E
Sbjct: 75 ILAFFAASDGIVLENLGVRFMGEVQFPEARAFYGFQIAIENIHSEMYSLLIDAYVKDAQE 134
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LF AI+NIPC+A+KA WA WI SS FAERL+ FAC+EGIFFSGSFC+I+WLKKRG
Sbjct: 135 KTYLFQAIQNIPCIAKKADWAFKWIESSADFAERLIAFACIEGIFFSGSFCSIYWLKKRG 194
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLH DFACLLYS + K+ + V +V EAVEIE +FVC+ALPC
Sbjct: 195 LMPGLTFSNELISRDEGLHRDFACLLYSYINKKPNESVVRQIVKEAVEIEKEFVCDALPC 254
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
AL+GMN+ LMS+YI+FVAD LL
Sbjct: 255 ALVGMNADLMSEYIEFVADHLL 276
>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/267 (72%), Positives = 223/267 (83%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
+EP+L E + RF MFPIR+ Q+WE YKKA ASFWTAEEV LS D +HW E L E+HFI
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVGLSADARHWDEALSPDERHFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIVLENLA+RF+ D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDH 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AI+ +P V +KA WA+ WI + FAER+V FACVEGIFFSGSFCAIFWLKK
Sbjct: 134 VEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERIVAFACVEGIFFSGSFCAIFWLKK 193
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYELLRNKLDEARVREIVADAVDIEREFVCDAL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P AL+GMN LMSQYI+FVADRLL+ +
Sbjct: 254 PVALVGMNGDLMSQYIEFVADRLLMAL 280
>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 338
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/263 (72%), Positives = 224/263 (85%), Gaps = 1/263 (0%)
Query: 26 EPIL-MEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EPIL ++RF MFPI+Y +WEMYKKA+ASFWTAEEVDLS D++HWE+L D EKHFIS
Sbjct: 14 EPILDAAGSERFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMKHWEKLSDDEKHFIS 73
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIVLENL RF+ ++QIPEARAFYGFQIA+ENIHSEMYSLL++ YIKD+
Sbjct: 74 HILAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDAYIKDAA 133
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+K LF A+ENIPCVA+KA WAL WI SS +FAERL+ FAC+EGIFFSGSFC+I+WLKKR
Sbjct: 134 QKKYLFEAMENIPCVAKKADWALKWIESSATFAERLIAFACIEGIFFSGSFCSIYWLKKR 193
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
G+MPGLTFSNELISRDEGLH DFACLLYS L+ + V +V EAVEIE +FVC+ALP
Sbjct: 194 GMMPGLTFSNELISRDEGLHRDFACLLYSYLQNKPDVSIVRQIVCEAVEIEKEFVCDALP 253
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+L+GMN LMS+YI+FVAD LL
Sbjct: 254 VSLVGMNKDLMSEYIEFVADHLL 276
>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS), partial
[Ostreococcus tauri]
Length = 382
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/271 (69%), Positives = 228/271 (84%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RFC+FPI++ +VWEMYKKA+ASFWTAEEVDL+ D + W+ L ++EKHF+SH
Sbjct: 63 EPLLRDNPDRFCLFPIKHPRVWEMYKKAEASFWTAEEVDLTYDYKDWQTLNENEKHFVSH 122
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFA+SDGIVLENL +RF++D+Q+PEAR+FYGFQ+A+ENIHSEMYSLLL+TYIKD K+
Sbjct: 123 VLAFFASSDGIVLENLCSRFMSDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKK 182
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LF AI +P VA KA WAL WI S SF ERLVGFACVEGIFFSGSFCAIFWLKKRG
Sbjct: 183 KSELFRAIHTVPTVAMKADWALHWIGSDASFPERLVGFACVEGIFFSGSFCAIFWLKKRG 242
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LM GLTFSNELISRDEGLHCDFACLLY +L+ L +HH+V +AV+IE +FVC+AL C
Sbjct: 243 LMRGLTFSNELISRDEGLHCDFACLLYGMLQNPLSEATLHHIVGDAVKIEKEFVCDALSC 302
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+L+GMN+ +MS YI+FVADRLL+ + LF
Sbjct: 303 SLVGMNADMMSTYIEFVADRLLIQLGASKLF 333
>gi|15232077|ref|NP_189342.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
thaliana]
gi|75273949|sp|Q9LSD0.1|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
AltName: Full=Ribonucleoside-diphosphate reductase TSO2
subunit; AltName: Full=Ribonucleotide reductase small
subunit C
gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
thaliana]
Length = 332
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/264 (75%), Positives = 231/264 (87%), Gaps = 1/264 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFI 83
+EP+L RFCMFPI Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L D E+HFI
Sbjct: 6 EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCVA+KA+WA+ WI S +FAER++ FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ +L ++V +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
PCAL+GMN LMSQYI+FVADRLL
Sbjct: 246 PCALVGMNRDLMSQYIEFVADRLL 269
>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/264 (75%), Positives = 231/264 (87%), Gaps = 1/264 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFI 83
+EP+L RFCMFPI Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L D E+HFI
Sbjct: 3 EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENNLNDGERHFI 62
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 63 KHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 122
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCVA+KA+WA+ WI S +FAER++ FACVEGIFFSGSFC+IFWLKK
Sbjct: 123 KERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKK 182
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ +L ++V +V +AVEIE +FVC+AL
Sbjct: 183 RGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDAL 242
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
PCAL+GMN LMSQYI+FVADRLL
Sbjct: 243 PCALVGMNRDLMSQYIEFVADRLL 266
>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/271 (70%), Positives = 228/271 (84%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RFC+FPI++ +VWEMYKKA+ASFWTAEEVDL+ D + W L D+E+HFISH
Sbjct: 27 EPLLRDNPDRFCLFPIKHAKVWEMYKKAEASFWTAEEVDLTYDYRDWITLNDNEQHFISH 86
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIVLENL +RF+ D+Q+PEAR+FYGFQ+A+ENIHSEMYSLLL+TYIKD K+
Sbjct: 87 VLAFFAASDGIVLENLCSRFMTDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKK 146
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LF AI +P VA+KA WAL WI S SFAERLVGFACVEGIFFSGSFCAIFWLKKRG
Sbjct: 147 KSDLFRAIHTVPTVAKKADWALKWIGSDASFAERLVGFACVEGIFFSGSFCAIFWLKKRG 206
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LM GLTFSNELISRDEGLHCDFACLLYS+L L + +H +V +AV IE +FVC+AL C
Sbjct: 207 LMRGLTFSNELISRDEGLHCDFACLLYSMLENPLSEKVLHQLVGDAVTIEKEFVCDALSC 266
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+L+GMN+++MS YI+FVADRLL+ + L+
Sbjct: 267 SLVGMNANMMSTYIEFVADRLLLQLGVSKLY 297
>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila]
gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila SB210]
Length = 376
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/275 (66%), Positives = 228/275 (82%)
Query: 13 NQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
N + +E + EP+L + RF +FPI+Y +VWEMYKK ASFWTA+E+DL QD++ W
Sbjct: 45 NDEGKAPKEGYEDEPLLKDNPNRFVLFPIKYNKVWEMYKKELASFWTADEIDLYQDLKDW 104
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
ERL D+E+HFI +VLAFFAASDGIVLENLA +F+ ++QIPEARAFYGFQIAMENIHSE Y
Sbjct: 105 ERLTDNERHFIKYVLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIAMENIHSETY 164
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFS 192
SLL++TYIKD EK LF A +N+P + +KA+WAL WI+++D+FA RL+ FA +EGIFFS
Sbjct: 165 SLLIDTYIKDEVEKDYLFKASQNVPVIHKKAQWALKWINNNDNFASRLIAFAAIEGIFFS 224
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSFCAIFWLKKR LMPGLTFSNELISRDEGLH DFACLLYS+L K+L ++++ ++ EAV
Sbjct: 225 GSFCAIFWLKKRSLMPGLTFSNELISRDEGLHTDFACLLYSMLNKKLTKEEIYEIITEAV 284
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EIE +F+ EALP LIGMNS++M QY++FVADRLL
Sbjct: 285 EIEKEFISEALPVELIGMNSNMMKQYLEFVADRLL 319
>gi|387789964|ref|YP_006255029.1| ribonucleotide reductase subunit beta [Solitalea canadensis DSM
3403]
gi|379652797|gb|AFD05853.1| ribonucleotide reductase, beta subunit [Solitalea canadensis DSM
3403]
Length = 323
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/263 (69%), Positives = 223/263 (84%), Gaps = 1/263 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
QEP+L E +RF + PI+Y ++WEMYKKA+ASFWTAEE+DLS D++ WE D E+HFIS
Sbjct: 5 QEPLLQENKERFVLLPIKYPEIWEMYKKAEASFWTAEEIDLSLDLKDWENFNDGERHFIS 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F++++QIPEAR +YGFQI MENIHSE Y+LL++TY+KD+
Sbjct: 65 HVLAFFAASDGIVNENLAVNFMSEVQIPEARCYYGFQIMMENIHSETYALLIDTYVKDTA 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLFNAIE +PCV QKA+WAL WI + +FAERLV FA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKNRLFNAIETVPCVKQKAEWALRWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEG HC+FACLLYS+L +L ++VH ++ +AVEIE QF+ +ALP
Sbjct: 184 GLMPGLTFSNELISRDEGSHCEFACLLYSMLINKLSEERVHQIITDAVEIEKQFITDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
ALIGMN+ LM QYI+FVADR L
Sbjct: 244 VALIGMNAKLMQQYIEFVADRWL 266
>gi|340500115|gb|EGR27014.1| ribonucleoside-diphosphate reductase small chain, putative
[Ichthyophthirius multifiliis]
Length = 366
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/284 (65%), Positives = 230/284 (80%), Gaps = 1/284 (0%)
Query: 14 QREQGEQEQE-DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
Q Q +Q + + EPIL E RF MFPI+Y ++WEMYKK ASFWTA+E+DL QD++ W
Sbjct: 35 QTNQTKQRSDFESEPILQENPNRFVMFPIKYNKIWEMYKKELASFWTADEIDLYQDLKDW 94
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
ERL D E+HFI +VLAFFAASDGIVLENLA +F+ ++QIPEARAFYGFQIAMENIHSE Y
Sbjct: 95 ERLTDGERHFIKYVLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIAMENIHSETY 154
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFS 192
SLL++TYIKD EK LF A NIP + +KA+WAL WI+++D+FA RLV FA +EGIFFS
Sbjct: 155 SLLIDTYIKDDNEKEFLFKACLNIPVINKKAQWALKWINNNDNFASRLVAFAAIEGIFFS 214
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSFCAIFWLKKR LMPGLTFSNELISRDEGLH DFACLLYS+++ +L ++V+ ++ EAV
Sbjct: 215 GSFCAIFWLKKRSLMPGLTFSNELISRDEGLHTDFACLLYSMMQNKLAKEEVNVIIAEAV 274
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EIE +F+ EALP LIGMNS++M +Y++FVADRLL + LF
Sbjct: 275 EIEKEFISEALPVELIGMNSNMMKEYLEFVADRLLYSLGYPKLF 318
>gi|452822363|gb|EME29383.1| ribonucleotide reductase small subunit [Galdieria sulphuraria]
Length = 375
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/287 (65%), Positives = 235/287 (81%), Gaps = 2/287 (0%)
Query: 6 NETENEVNQREQGEQEQEDQEPILM--EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
+ET++ +E + + Q P + ++R+ +FPIR+ ++W+MYKK +ASFWTAEE+
Sbjct: 34 SETKDSYAVKELYQTASKSQVPFVFCSGSSERYTLFPIRHPEIWKMYKKHEASFWTAEEI 93
Query: 64 DLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIA 123
DLS D++ W++L E+HFISHVLAFFA+SDGIVLENLA RF D+QIPEAR FYGFQIA
Sbjct: 94 DLSSDLEDWKKLNADERHFISHVLAFFASSDGIVLENLAERFCRDVQIPEARCFYGFQIA 153
Query: 124 MENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183
MENIHSE YSLL++TYI+D++EK RLF A+E IPC+ +KA+WAL WI SS SFAERLV F
Sbjct: 154 MENIHSETYSLLIDTYIRDAQEKARLFEAMERIPCIEKKAQWALRWIQSSASFAERLVAF 213
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL ++L +
Sbjct: 214 AAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLPEKLPRET 273
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ ++ +AV E +F+CE+LP ALIGMNS +MSQYI+FVADRLLV +
Sbjct: 274 IEAIIVDAVSCEKEFICESLPVALIGMNSDMMSQYIEFVADRLLVAL 320
>gi|452819577|gb|EME26633.1| ribonucleoside-diphosphate reductase subunit M2 [Galdieria
sulphuraria]
Length = 464
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 222/262 (84%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L+E RF +FPIRY+Q+WE+YK+A+ASFWT EEVDLSQD++ W L SE+HFISH
Sbjct: 146 EPLLLEDTSRFVLFPIRYRQIWELYKRAEASFWTVEEVDLSQDLRDWNSLHSSEQHFISH 205
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLAARF ++Q+PEAR FYGFQ+AMEN+HSEMY+LL++TYI+D E
Sbjct: 206 VLAFFAASDGIVNENLAARFSTEVQVPEARCFYGFQMAMENVHSEMYALLIDTYIRDMAE 265
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K RLF AIEN+ CV +KA W+L WI S SFAERLV FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 266 KRRLFYAIENLTCVKKKADWSLKWIRCSSSFAERLVAFAAVEGIFFSGSFCSIFWLKKRG 325
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHC+FACLLYSLL+ L ++V ++ +AV+ E +F+ +ALP
Sbjct: 326 LMPGLTFSNELISRDEGLHCEFACLLYSLLQHPLSQERVTEIIVDAVDHEKEFILDALPV 385
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
ALIGMN+ LMSQYI++ ADRLL
Sbjct: 386 ALIGMNAGLMSQYIEYCADRLL 407
>gi|428182355|gb|EKX51216.1| hypothetical protein GUITHDRAFT_66373 [Guillardia theta CCMP2712]
Length = 327
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/274 (68%), Positives = 222/274 (81%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L RF +FPI+Y VWEMYKK +ASFWT EEVDLSQD+ HWE+L D+EKHFI H
Sbjct: 3 EPLLTPNPNRFVLFPIKYHAVWEMYKKHEASFWTVEEVDLSQDMIHWEKLNDNEKHFIKH 62
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIVLENLA F +IQIPEAR FYGFQIAMENIHSEMYSLL++TY++D E
Sbjct: 63 VLAFFAASDGIVLENLAGNFSTEIQIPEARCFYGFQIAMENIHSEMYSLLIDTYVRDPVE 122
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K +LF AIE +P V +KA WA+ W+ SFA+RLV FA VEGIFFSGSFCAIFWLKKRG
Sbjct: 123 KDKLFRAIETVPAVMKKADWAIRWMGEKCSFAKRLVAFAAVEGIFFSGSFCAIFWLKKRG 182
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGL FSNELISRDEGLH DFACL+YS+L +L ++V ++ EAV+ ETQFV EALP
Sbjct: 183 LMPGLCFSNELISRDEGLHTDFACLIYSMLENKLSTEEVTQIITEAVDCETQFVTEALPV 242
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
LIGMN+ LMSQYI+FVADRLLV + Q ++ ++
Sbjct: 243 DLIGMNAQLMSQYIEFVADRLLVALGQPKVYKVS 276
>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|41019487|sp|P42521.2|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
Length = 338
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/272 (68%), Positives = 221/272 (81%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI+Y +W MYKKA AS W AEE+DL D WE +L D+E+HFIS
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA RF++++QIPEAR FYGFQIA+ENIHSE YSLL+ETYIKD +
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K +LFNAIE IPC+ +KA+WAL WI+ SDSFAERLV FA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLM GLTFSNELISRDEGLHCDFACLLY+ L+++L + + M+ +AVE E +F+CE+LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMNS MSQYI+F ADRL+V + +F
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIF 283
>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
Length = 335
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/267 (67%), Positives = 224/267 (83%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+EPIL E RF +FPI+Y +W MYK+A+ASFWTAEE+DL+ D+ W +L D+E+HFI
Sbjct: 6 EEPILKENKDRFVLFPIKYPDIWSMYKQAEASFWTAEEIDLAPDLNDWSSKLNDNERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S+VLAFFAASDGIV ENLA RF++++QIPEAR FYGFQIA+ENIHSE YSLL++TYIKD+
Sbjct: 66 SNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
++K +LFNAI+ IPC+ +KA WAL WI++SDSFAERLV FA VEGIFFSGSFC+IFWLKK
Sbjct: 126 EQKSKLFNAIDTIPCIKKKADWALKWINNSDSFAERLVAFAAVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHC+FACLLY+ L +L + + ++ +AV E +F+C++L
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCNFACLLYTKLINKLESKTLEAIIRDAVVCEKEFICDSL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS MSQYI+F ADRLLV +
Sbjct: 246 PVDLIGMNSRSMSQYIEFCADRLLVSL 272
>gi|255530602|ref|YP_003090974.1| ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
Length = 324
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/274 (65%), Positives = 226/274 (82%), Gaps = 1/274 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++E +L E RF + PI+Y ++WEMYKK++ASFWTAEE+DLS D +HW+ L D E+HF
Sbjct: 2 QEEEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHWDNLNDGERHF 61
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISH+LAFF+ASDGIV ENLA F++++Q+PEAR FYGFQI MENIHSE Y+LL++TYIKD
Sbjct: 62 ISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIKD 121
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK RLF+AIE +PCV +KA+WAL WI + SFAERLV FA VEGIFFSGSFC+IFWLK
Sbjct: 122 PDEKDRLFHAIETVPCVKKKAEWALRWIDNG-SFAERLVAFAAVEGIFFSGSFCSIFWLK 180
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEG HC+FACLLY +L+ +L ++VH ++ +AVEIE +FV +A
Sbjct: 181 KRGLMPGLTFSNELISRDEGSHCEFACLLYGMLKNKLSQEQVHGIIRDAVEIEKEFVTDA 240
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP ALIGMN+ LMSQYI+FVADR L + ++
Sbjct: 241 LPVALIGMNAKLMSQYIEFVADRWLQELGYSKIY 274
>gi|449549662|gb|EMD40627.1| hypothetical protein CERSUDRAFT_111206 [Ceriporiopsis subvermispora
B]
Length = 400
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/300 (63%), Positives = 236/300 (78%), Gaps = 6/300 (2%)
Query: 3 SLKNETENEV---NQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFW 58
S E+E+ V QR G+ + E+QEP+L E +RF +FPI+Y ++W+MYKKA+ASFW
Sbjct: 47 STSPESEDGVEAWRQRWIGDVDLPENQEPLLTESKRRFVLFPIQYHEIWQMYKKAEASFW 106
Query: 59 TAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
TAEE+DLS+D+ W RL + E+HF+SHVLAFFAASDGIV ENL RF N++Q+ EAR F
Sbjct: 107 TAEEMDLSKDLHDWNNRLTNDERHFVSHVLAFFAASDGIVNENLVERFSNEVQVAEARCF 166
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSF 176
YGFQI MENIHSE YSLL++TYIKD K++ LF+AI+ IPC+ +KA WAL WI SF
Sbjct: 167 YGFQIMMENIHSETYSLLIDTYIKDPKQREHLFDAIDTIPCIKRKADWALRWISDKRSSF 226
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236
AERL+ FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+
Sbjct: 227 AERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLK 286
Query: 237 KRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+R H + V ++ EAVEIE +F+ +ALPCALIGMNS LM QYI+FVADRLLV + ++
Sbjct: 287 RRPHPEVVRRIIMEAVEIEQEFLTDALPCALIGMNSKLMCQYIEFVADRLLVALGDPKVY 346
>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
Length = 324
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/274 (65%), Positives = 227/274 (82%), Gaps = 1/274 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++E +L E RF + PI+Y ++WEMYKK++ASFWTAEE+DLS D +HW+ L D E+HF
Sbjct: 2 QEEEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHWDNLNDGERHF 61
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISH+LAFF+ASDGIV ENLA F++++Q+PEAR FYGFQI MENIHSE Y+LL++TYIKD
Sbjct: 62 ISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIKD 121
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+EK RLF+AIE +PCV +KA+WAL WI + + FAERLV FA VEGIFFSGSFC+IFWLK
Sbjct: 122 PEEKDRLFHAIETVPCVKKKAEWALRWIDNGN-FAERLVAFAAVEGIFFSGSFCSIFWLK 180
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEG HC+FACLLYS+L+ +L + VH ++ +AVEIE +FV +A
Sbjct: 181 KRGLMPGLTFSNELISRDEGSHCEFACLLYSMLKNKLSEEHVHGIIRDAVEIEKEFVTDA 240
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP ALIGMN+ LMSQYI+FVADR L + ++
Sbjct: 241 LPVALIGMNAKLMSQYIEFVADRWLQELGYTKIY 274
>gi|410928203|ref|XP_003977490.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Takifugu rubripes]
Length = 388
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/284 (64%), Positives = 225/284 (79%), Gaps = 4/284 (1%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE 73
+R GE+E E P+L E +RF +FPI+Y+ +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 60 KRRTGEKEVE---PLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWE 116
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYS
Sbjct: 117 SLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYS 176
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFS 192
LL++TYIKD E+ LFNAIE +PCV +KA WAL+WI + S ++ ER+V FA VEGIFFS
Sbjct: 177 LLIDTYIKDPSEREYLFNAIETLPCVKRKADWALNWIGNKSAAYGERVVAFAAVEGIFFS 236
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q V ++ AV
Sbjct: 237 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSAQTVSDIIKNAV 296
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EIE +F+ EALP LIGMN LM QYI+FVADRL++ + ++
Sbjct: 297 EIEQEFLTEALPVKLIGMNCGLMKQYIEFVADRLMLELGFTKIY 340
>gi|410928205|ref|XP_003977491.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Takifugu rubripes]
Length = 386
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/284 (64%), Positives = 225/284 (79%), Gaps = 4/284 (1%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE 73
+R GE+E E P+L E +RF +FPI+Y+ +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 58 KRRTGEKEVE---PLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWE 114
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYS
Sbjct: 115 SLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYS 174
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFS 192
LL++TYIKD E+ LFNAIE +PCV +KA WAL+WI + S ++ ER+V FA VEGIFFS
Sbjct: 175 LLIDTYIKDPSEREYLFNAIETLPCVKRKADWALNWIGNKSAAYGERVVAFAAVEGIFFS 234
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q V ++ AV
Sbjct: 235 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSAQTVSDIIKNAV 294
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EIE +F+ EALP LIGMN LM QYI+FVADRL++ + ++
Sbjct: 295 EIEQEFLTEALPVKLIGMNCGLMKQYIEFVADRLMLELGFTKIY 338
>gi|403418121|emb|CCM04821.1| predicted protein [Fibroporia radiculosa]
Length = 412
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/290 (65%), Positives = 229/290 (78%), Gaps = 3/290 (1%)
Query: 10 NEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
+ + +R GE + E EP+LME +RF +FPI+Y ++W+MYKKA+ASFWT EEVDLS+D
Sbjct: 68 DALRKRWVGEVDLPEHMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTVEEVDLSKD 127
Query: 69 VQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
W RL D+E+HFISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENI
Sbjct: 128 FHDWNNRLSDNERHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENI 187
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACV 186
HSE YSLL++TYIKD +++ LF+AIE IPC+ +KA WAL WI SFAERLV FA V
Sbjct: 188 HSETYSLLIDTYIKDPQQREHLFDAIETIPCIKKKADWALRWISDKGCSFAERLVAFAAV 247
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H + V
Sbjct: 248 EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRR 307
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ EAVEIE +F+ +ALPCALIGMNS LM QYI+FVADRLLV + ++
Sbjct: 308 IIAEAVEIEQEFLTDALPCALIGMNSGLMCQYIEFVADRLLVALGDSKMY 357
>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
Length = 335
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/267 (68%), Positives = 219/267 (82%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+EP+L E RF +FPI+Y +W MYKKA+ASFWTAEE+DL+ DV WE +L D+E+HFI
Sbjct: 6 EEPLLKENKDRFVLFPIKYTDIWNMYKKAEASFWTAEEIDLASDVNEWENKLNDNERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+VLAFFAASDGIV ENLA +F++++QIPEAR FYGFQIA+ENIHSE YSLL++TYIK+
Sbjct: 66 KNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIKNP 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK LFNAIE IPCV +KA WAL WI +S SFAERLV FA VEGIFFSGSFC+IFWLKK
Sbjct: 126 DEKKVLFNAIETIPCVKKKADWALRWITNSKSFAERLVAFAAVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY+ L +L + + ++ +AVE E +FV ++L
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLLYNKLNNKLDVKTIESIIRDAVECEKEFVTDSL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS MS+YI+F ADRLLV +
Sbjct: 246 PVDLIGMNSREMSKYIEFCADRLLVSL 272
>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 225/275 (81%), Gaps = 1/275 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E E +L E R+ MFPI+Y +WEMYKK +ASFWTAEE+DLSQD++ WE L D+++HF
Sbjct: 12 EPMEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWENLSDNDRHF 71
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIVLENL+A+F ++Q PEARAFYGFQIAMENIHSE YSLL++ YIKD
Sbjct: 72 ISHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKD 131
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
++K ++F AIE +P V +KA+WAL WI+ + FAERL+ FACVEGI FSGSFCAI+WLK
Sbjct: 132 PEQKDKIFRAIETVPSVRKKAEWALSWINDDNCFAERLIAFACVEGILFSGSFCAIYWLK 191
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-KRLHWQKVHHMVHEAVEIETQFVCE 261
KRGLMPGLTFSNELISRDEGLH DFACLLY++L+ RL ++VH +V AVE+E F+ E
Sbjct: 192 KRGLMPGLTFSNELISRDEGLHADFACLLYNMLKYTRLPDERVHEIVRGAVEVERVFISE 251
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+LP +LIGMNS LM +YI+FVADRLLV + L+
Sbjct: 252 SLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLY 286
>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/263 (69%), Positives = 220/263 (83%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L + RF +FP+++ +VW+MYK+A ASFW AEE+DLS D++ W L +SE+HFISHVL
Sbjct: 1 MLQDNEDRFSLFPVKHVEVWKMYKQAVASFWNAEEIDLSTDLRDWGNLTESEQHFISHVL 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIVLENL RFL D+Q+PEARAFYGFQ+AMENIHSE Y LLLETYIKDS ++
Sbjct: 61 AFFAASDGIVLENLGLRFLKDVQMPEARAFYGFQLAMENIHSETYGLLLETYIKDSVQRK 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
L AI +P V +KA+WAL WI SS+ FAERL+ FACVEGIFFSGSFCAIFWLKKRGLM
Sbjct: 121 HLMRAIHTVPTVGRKAQWALRWIQSSECFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 180
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCAL 267
GLTFSNELISRDEGLHCDFACLLYS+L+ L +++ +V +AVEIE +FVC+AL CAL
Sbjct: 181 RGLTFSNELISRDEGLHCDFACLLYSMLKHPLEPERLQEIVKDAVEIEKEFVCDALSCAL 240
Query: 268 IGMNSSLMSQYIKFVADRLLVHI 290
+GMN+ LMS+YI+FVADRLLV +
Sbjct: 241 VGMNADLMSEYIEFVADRLLVQL 263
>gi|384252466|gb|EIE25942.1| ribonucleoside-diphosphate reductase small chain C [Coccomyxa
subellipsoidea C-169]
Length = 340
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/265 (68%), Positives = 219/265 (82%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L RF M+P+RY+ V+EMYKKA ASFWT EEVDLSQD++ WE+L D E+HFI+H
Sbjct: 16 EPLLSPNGDRFVMYPVRYQGVFEMYKKAVASFWTVEEVDLSQDMRDWEKLSDDERHFITH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV+ENLA RF++++QIPEARAFYGFQIA+EN+HSEMYSLLL+ YI+D +
Sbjct: 76 ILAFFAASDGIVMENLAVRFMSEVQIPEARAFYGFQIAIENVHSEMYSLLLDHYIRDVDQ 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K ++ AI+ +PCV +KA+WA WI +SFAERLV FACVEGI FSGSFCAIFWLKKR
Sbjct: 136 KDKMLRAIQTVPCVGKKAEWAQRWIGGGESFAERLVAFACVEGIHFSGSFCAIFWLKKRL 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLH DFACLLYS L+ L V+ +V EAVE+E +F CEAL C
Sbjct: 196 LMPGLTFSNELISRDEGLHTDFACLLYSQLQHPLDQAAVYRIVREAVELEHEFCCEALSC 255
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHI 290
AL+GMN+ LM QYI +VADRLLV +
Sbjct: 256 ALVGMNADLMRQYIDYVADRLLVAL 280
>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 410
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/279 (65%), Positives = 225/279 (80%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+ +E EP+L E RF +FPI+Y VW+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 66 KPEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 125
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MEN+HSE YSLL++T
Sbjct: 126 ERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDT 185
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI D++++ LFNAIENIPC+ +KA WAL WI +S FA RLV FA VEGIFFSGSF +
Sbjct: 186 YISDTRQRKYLFNAIENIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFAS 245
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL R ++V ++ EAVEIE +
Sbjct: 246 IFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNNRPSNEEVRAIITEAVEIEQE 305
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPCAL+GMN++LM QYI+FVADRLL+ + ++
Sbjct: 306 FLSDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVY 344
>gi|389745325|gb|EIM86506.1| ribonucleotide reductase small subunit [Stereum hirsutum FP-91666
SS1]
Length = 420
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/271 (67%), Positives = 222/271 (81%), Gaps = 2/271 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D+E+
Sbjct: 88 EEHMEPLLIESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNER 147
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYI
Sbjct: 148 HFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYI 207
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD KE+ LF+A+E IPCV +KA WAL WI S FAERLV FA VEGIFFSGSF +IF
Sbjct: 208 KDPKERDYLFDAVETIPCVKRKADWALKWISDRRSCFAERLVAFAAVEGIFFSGSFASIF 267
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELI+RDEG+H DFACLL+S +++R H V ++ EAVEIE +F+
Sbjct: 268 WLKKRGLMPGLTFSNELITRDEGMHTDFACLLFSHMKRRPHPDTVRRIISEAVEIEQEFL 327
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPCALIGMNS LM QYI+FVADRLL+ +
Sbjct: 328 TDALPCALIGMNSKLMRQYIEFVADRLLLAL 358
>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
acridum CQMa 102]
Length = 411
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/281 (64%), Positives = 226/281 (80%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G + +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 70 GIKAEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLN 129
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 130 DDEKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 189
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK++ ++ LFNAI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSG+F
Sbjct: 190 DTYIKENAQRTYLFNAIDTIPCIRKKADWAIRWIQDKESTFAQRLVAFAAVEGIFFSGAF 249
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R Q +H ++ +AV IE
Sbjct: 250 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKQIIHDIITDAVAIE 309
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 310 KEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVY 350
>gi|336373646|gb|EGO01984.1| hypothetical protein SERLA73DRAFT_104202 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386462|gb|EGO27608.1| hypothetical protein SERLADRAFT_354853 [Serpula lacrymans var.
lacrymans S7.9]
Length = 379
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/279 (66%), Positives = 222/279 (79%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E +EP+L + +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+DV W RL D+E+H
Sbjct: 49 ESEEPLLKDSKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDVHDWANRLNDNERH 108
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 109 FISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 168
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D E+ LF+A+E IPCV +KA WAL WI + S FAERLV FA VEGIFFSGSF +IFW
Sbjct: 169 DPSEREYLFDAVETIPCVKRKADWALTWISDNRSTFAERLVAFAAVEGIFFSGSFASIFW 228
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H V ++ EAV IE F+
Sbjct: 229 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDVVRRIITEAVVIEQDFLT 288
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALPCALIGMNS LM QYI+FVADRLLV + ++ +
Sbjct: 289 DALPCALIGMNSKLMRQYIEFVADRLLVSLGNDKVYNVT 327
>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
siliculosus]
Length = 504
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 213/262 (81%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPI RF +FPI++ ++W+MYKKA+ASFWT EEVDLSQD + WE L +E+HFIS
Sbjct: 181 EPICRADPSRFVLFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWEALTGNEQHFISM 240
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV+ENL RF ++Q+PEAR FYGFQIAME+IH EMY+LLL+TYIKD +E
Sbjct: 241 VLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQE 300
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ LFNA +IPCV QKA WA+ WI S +FAERLV FA VEG+FFSGSFCAIFWLKKRG
Sbjct: 301 RDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRG 360
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNE+ISRDEGLHCDFAC L++ L + + V +V EAVE+E F+C ALPC
Sbjct: 361 LMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPC 420
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
+LIGMN+ +MSQYI+FVADRLL
Sbjct: 421 SLIGMNAGVMSQYIEFVADRLL 442
>gi|392568085|gb|EIW61259.1| ribonucleotide reductase small subunit [Trametes versicolor
FP-101664 SS1]
Length = 410
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 223/270 (82%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL + E+H
Sbjct: 79 EHMEPLLIESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDMHDWNNRLTNDERH 138
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F+SHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 139 FVSHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 198
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D +E+ RLF+AI+ IPC+ +KA WAL WI +S F+ERL+ FA VEGIFFSGSF +IFW
Sbjct: 199 DPQERERLFDAIDTIPCIKKKADWALRWISDKESAFSERLIAFAAVEGIFFSGSFASIFW 258
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H V ++ EAVEIE +F+
Sbjct: 259 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDIVLAIIKEAVEIEQEFLT 318
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPCALIGMN++LM QYI+FVADRLLV +
Sbjct: 319 DALPCALIGMNATLMRQYIEFVADRLLVAL 348
>gi|390601337|gb|EIN10731.1| beta subunit of ribonucleotide reductase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 426
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/286 (66%), Positives = 229/286 (80%), Gaps = 3/286 (1%)
Query: 8 TENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
T ++ R GE + EDQEP+LME +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS
Sbjct: 80 TVEDLRTRYVGEVDLPEDQEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLS 139
Query: 67 QDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
+D+ W RL D+E+HFISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI ME
Sbjct: 140 KDLHDWNNRLNDNERHFISHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMME 199
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
NIHSE YSLL++TYIKD ++ LF+AIE IPCV +KA WA+ WI+ S FAERLV FA
Sbjct: 200 NIHSETYSLLIDTYIKDPAQRDYLFDAIETIPCVKRKADWAIRWINDQRSGFAERLVAFA 259
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S LR+R H + V
Sbjct: 260 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPEVV 319
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ EAV IE +F+ +ALP ALIGMN+ LM QYI+FVADRLLV +
Sbjct: 320 KAIIVEAVGIEQEFLTDALPVALIGMNAKLMCQYIEFVADRLLVAL 365
>gi|389747381|gb|EIM88560.1| ribonucleotide reductase small subunit [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/270 (68%), Positives = 221/270 (81%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+LME +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D+E+H
Sbjct: 84 ERMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNERH 143
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 144 FISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 203
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFW 200
D KE+ LF+A+E IPCV +KA WAL WI +FAERLV FA VEGIFFSGSF +IFW
Sbjct: 204 DPKERDYLFDAVETIPCVKRKADWALKWISDKRATFAERLVAFAAVEGIFFSGSFASIFW 263
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI+RDEG+H DFACLL+S L+KR H V ++ +AV+IE +F+
Sbjct: 264 LKKRGLMPGLTFSNELITRDEGMHTDFACLLFSHLKKRPHPDTVLRIITDAVQIEQEFLT 323
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPCALIGMNS LM QYI+FVADRLL+ +
Sbjct: 324 DALPCALIGMNSKLMRQYIEFVADRLLLAL 353
>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
Length = 324
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/263 (68%), Positives = 220/263 (83%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L + RFC+FPI+ VW+MYK+A+ASFW+AEE+DLS D + W L D+E+HFISHVL
Sbjct: 1 MLQDNEDRFCLFPIKEHAVWKMYKQAEASFWSAEEIDLSMDYKDWVTLNDNEQHFISHVL 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIVLENL RF+ D+Q+PEARAFY FQ+A+ENIHSE Y LL++TY+KDS +K
Sbjct: 61 AFFAASDGIVLENLGLRFMKDVQLPEARAFYAFQLAIENIHSETYGLLIDTYVKDSVKKR 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LF AI N+P VA+KA+WAL WI SS+ FAERLV FACVEGIFFSGSFCAIFWLKKRGLM
Sbjct: 121 HLFRAIHNVPTVARKAQWALKWIQSSECFAERLVAFACVEGIFFSGSFCAIFWLKKRGLM 180
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCAL 267
GLTFSNELISRDEGLHCDFACLLYS+L+ L ++ +V +AV+IE +FVC+AL CAL
Sbjct: 181 RGLTFSNELISRDEGLHCDFACLLYSMLKHPLDPARLQEIVKDAVDIEKEFVCDALSCAL 240
Query: 268 IGMNSSLMSQYIKFVADRLLVHI 290
+GMN+ LMS+YI+FVADRL+ +
Sbjct: 241 VGMNADLMSEYIEFVADRLMTQL 263
>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 413
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/281 (64%), Positives = 225/281 (80%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G +EQE EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W ++
Sbjct: 72 GIKEQEMDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKIN 131
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+ EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL+
Sbjct: 132 EDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLI 191
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSF 195
+TYIK+ ++ LFNAI+ IPC+ +KA WAL WI SFA+RLV FA VEGIFFSG+F
Sbjct: 192 DTYIKEPAQRTYLFNAIDTIPCIRKKADWALKWISDEKSSFAQRLVAFAAVEGIFFSGAF 251
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ R Q + ++ +AV+IE
Sbjct: 252 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNRPSKQVIQDIIVDAVQIE 311
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 312 QEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVY 352
>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 407
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/281 (65%), Positives = 223/281 (79%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G + +E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 63 GIKPEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLN 122
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E++FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 123 DDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 182
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ +K LFNAI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF
Sbjct: 183 DTYIKEQAQKTYLFNAIDTIPCIKKKADWAVKWIQDKNSTFAQRLVAFAAVEGIFFSGSF 242
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L+ R Q V ++ EAVEIE
Sbjct: 243 ASIFWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLKHRPSKQAVQDVITEAVEIE 302
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 303 QEFLTEALPCALLGMNSTLMKQYIEFVADRLLVTLGNDKVY 343
>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
B05.10]
gi|347828025|emb|CCD43722.1| similar to ribonucleoside-diphosphate reductase small subunit
[Botryotinia fuckeliana]
Length = 407
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/275 (66%), Positives = 222/275 (80%), Gaps = 2/275 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLL 76
G + +E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W ERL
Sbjct: 63 GIKPEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNERLN 122
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E++FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 123 DDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 182
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ +K LFNAI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF
Sbjct: 183 DTYIKEQSQKTYLFNAIDTIPCIKKKADWAVKWIQDKNSTFAQRLVAFAAVEGIFFSGSF 242
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L+ R Q V ++ EAVEIE
Sbjct: 243 ASIFWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLKHRPSKQAVQDVITEAVEIE 302
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ EALPCAL+GMNS+LM QYI+FVADRLL+ +
Sbjct: 303 QEFLTEALPCALLGMNSNLMKQYIEFVADRLLLSL 337
>gi|380485558|emb|CCF39283.1| ribonucleoside-diphosphate reductase small subunit [Colletotrichum
higginsianum]
Length = 413
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 225/279 (80%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+EQE EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W ++ +
Sbjct: 74 KEQELDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINED 133
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++T
Sbjct: 134 EKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDT 193
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAI+ IPC+ +KA WAL WI+ SFA+RLV FA VEGIFFSG+F +
Sbjct: 194 YIKEPAQRTYLFNAIDTIPCIRKKADWALKWINDEKSSFAQRLVAFAAVEGIFFSGAFAS 253
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ R Q + ++ +AV+IE +
Sbjct: 254 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNRPSKQVIEDIIVDAVKIEQE 313
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 314 FLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVY 352
>gi|348518321|ref|XP_003446680.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Oreochromis niloticus]
Length = 385
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 221/269 (82%), Gaps = 1/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L D E++F
Sbjct: 63 QEEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYF 122
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIV ENL RF+ ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 123 ISHVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKD 182
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWL 201
KE+ LFNAIE +PCV +KA WAL+WI + + ++ ER+V FA VEGIFFSGSF AIFWL
Sbjct: 183 PKEREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWL 242
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +
Sbjct: 243 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTD 302
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALP LIGMN +M QYI+FVADRLL+ +
Sbjct: 303 ALPVKLIGMNCDMMKQYIEFVADRLLLEL 331
>gi|348518323|ref|XP_003446681.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Oreochromis niloticus]
Length = 391
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 221/269 (82%), Gaps = 1/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L D E++F
Sbjct: 69 QEEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYF 128
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIV ENL RF+ ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 129 ISHVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKD 188
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWL 201
KE+ LFNAIE +PCV +KA WAL+WI + + ++ ER+V FA VEGIFFSGSF AIFWL
Sbjct: 189 PKEREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWL 248
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +
Sbjct: 249 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTD 308
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALP LIGMN +M QYI+FVADRLL+ +
Sbjct: 309 ALPVKLIGMNCDMMKQYIEFVADRLLLEL 337
>gi|348518329|ref|XP_003446684.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Oreochromis niloticus]
Length = 391
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 221/269 (82%), Gaps = 1/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L D E++F
Sbjct: 69 QEEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYF 128
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIV ENL RF+ ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 129 ISHVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKD 188
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWL 201
KE+ LFNAIE +PCV +KA WAL+WI + + ++ ER+V FA VEGIFFSGSF AIFWL
Sbjct: 189 PKEREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWL 248
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +
Sbjct: 249 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTD 308
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALP LIGMN +M QYI+FVADRLL+ +
Sbjct: 309 ALPVKLIGMNCDMMKQYIEFVADRLLLEL 337
>gi|429863484|gb|ELA37935.1| ribonucleotide reductase small subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 413
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/296 (62%), Positives = 231/296 (78%), Gaps = 7/296 (2%)
Query: 8 TENEVNQRE-----QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEE 62
TE Q+E G +E+E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE
Sbjct: 54 TEESTKQQEAPVVAPGIKEEEMDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEE 113
Query: 63 VDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
+DLS+D+ W ++ D EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQ
Sbjct: 114 IDLSKDLHDWNNKINDDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQ 173
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERL 180
I MENIHSE YSLL++TYIK+ ++ LFNAI+ IPC+ +KA WAL WI + S FA+RL
Sbjct: 174 IMMENIHSETYSLLIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALRWITDTKSTFAQRL 233
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ R
Sbjct: 234 VAFAAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKHRPS 293
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
Q + ++ +AV+IE +F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 294 KQVIEDIIVDAVKIEQEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVY 349
>gi|358383626|gb|EHK21290.1| hypothetical protein TRIVIDRAFT_78453 [Trichoderma virens Gv29-8]
Length = 415
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/279 (64%), Positives = 224/279 (80%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ E EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 75 KPDEVDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 134
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 135 EKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 194
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK++ +++ LFNAIE IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSG+F +
Sbjct: 195 YIKENSQRNYLFNAIETIPCIRKKADWAIKWIQDKNSSFAQRLVAFAAVEGIFFSGAFAS 254
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R + + ++ +AV IE +
Sbjct: 255 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEVIRDIITDAVRIEQE 314
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 315 FLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKIY 353
>gi|348518327|ref|XP_003446683.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Oreochromis niloticus]
Length = 385
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 221/269 (82%), Gaps = 1/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L D E++F
Sbjct: 63 QEEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYF 122
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIV ENL RF+ ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 123 ISHVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKD 182
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWL 201
KE+ LFNAIE +PCV +KA WAL+WI + + ++ ER+V FA VEGIFFSGSF AIFWL
Sbjct: 183 PKEREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWL 242
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +
Sbjct: 243 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTD 302
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALP LIGMN +M QYI+FVADRLL+ +
Sbjct: 303 ALPVKLIGMNCDMMKQYIEFVADRLLLEL 331
>gi|389639056|ref|XP_003717161.1| ribonucleoside-diphosphate reductase small subunit [Magnaporthe
oryzae 70-15]
gi|351642980|gb|EHA50842.1| ribonucleoside-diphosphate reductase small subunit [Magnaporthe
oryzae 70-15]
Length = 412
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/276 (66%), Positives = 222/276 (80%), Gaps = 2/276 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EPIL E QRF +FPIRY +VW+MYKKA+ASFWTAEE+DLS+D+ W +L D EK+
Sbjct: 71 EMDEPILQENPQRFVLFPIRYHEVWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKY 130
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 131 FISHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIK 190
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
++ ++ LFNAI+ IPC+ +KA WAL WI S FA RL+ FA VEGIFFSG+F +IFW
Sbjct: 191 ETAQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFW 250
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLH DFACLL+SLL R + + V +V +AV+IE +F+
Sbjct: 251 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFSLLNNRPNKEVVKEIVVDAVKIEQEFLT 310
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALPCAL+GMN++LM QYI+FVADRLLV + ++
Sbjct: 311 EALPCALLGMNANLMKQYIEFVADRLLVALGNEKVY 346
>gi|409049897|gb|EKM59374.1| hypothetical protein PHACADRAFT_249824 [Phanerochaete carnosa
HHB-10118-sp]
Length = 416
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/270 (68%), Positives = 220/270 (81%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E EP+LME +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D E++
Sbjct: 85 EHMEPLLMESKRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDIHDWTNRLNDKERY 144
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 145 FISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 204
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LF+AIE IPC+ +KA WAL WI + SFAERLV FA VEGIFFSGSF +IFW
Sbjct: 205 DPKQREHLFDAIETIPCIKKKADWALRWISDTKSSFAERLVAFAAVEGIFFSGSFASIFW 264
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H + V +V EAV IE +F+
Sbjct: 265 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRKIVAEAVAIEQEFLT 324
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP ALIGMN+ LM QYI+FVADRLLV +
Sbjct: 325 DALPVALIGMNAKLMCQYIEFVADRLLVAL 354
>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
Length = 387
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/277 (64%), Positives = 222/277 (80%), Gaps = 1/277 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
+ Q ++ +EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D QHW+
Sbjct: 57 KPQNVKKFNTEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDTQHWDS 116
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSL
Sbjct: 117 LKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSL 176
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSG 193
L++TYIKD KE+ LFNAIE +PCV +KA WAL+WI + ++ F ER+V FA VEGIFFSG
Sbjct: 177 LIDTYIKDPKERDYLFNAIETLPCVKRKADWALNWIGNKNAGFGERVVAFAAVEGIFFSG 236
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVE
Sbjct: 237 SFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSKETVTKLIRNAVE 296
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALP LIGMN LM+QYI+FVADRL++ +
Sbjct: 297 IEQEFLTKALPVKLIGMNCDLMTQYIEFVADRLMLEL 333
>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
anisopliae ARSEF 23]
Length = 414
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/281 (64%), Positives = 226/281 (80%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G + +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 73 GIKAEEVDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLN 132
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 133 DDEKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 192
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK++ ++ LFNAI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSG+F
Sbjct: 193 DTYIKENAQRTYLFNAIDTIPCIRKKADWAIRWIQDKESTFAQRLVAFAAVEGIFFSGAF 252
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R Q ++ ++ +AV IE
Sbjct: 253 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKQVIYDIITDAVAIE 312
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 313 QEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVY 353
>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/275 (65%), Positives = 224/275 (81%), Gaps = 1/275 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E +E +L E R+ MFPI+Y +WEMYKK +ASFWTAEE+DLSQD++ WE L D+++HF
Sbjct: 12 EPKEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWENLSDNDRHF 71
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIVLENL+A+F ++Q PEARAFYGFQIAMENIHSE YSLL++ YIKD
Sbjct: 72 ISHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKD 131
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK ++F AIE +P V +KA+WAL WI+ + F+ERL+ FACVEGI FSGSFCAI+WLK
Sbjct: 132 PAEKDKIFRAIETVPSVRKKAEWALSWINDDNCFSERLIAFACVEGILFSGSFCAIYWLK 191
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-KRLHWQKVHHMVHEAVEIETQFVCE 261
KRGLMPGLTFSNELISRDEGLH DFACLLY+++ RL ++VH +V AV++E F+ E
Sbjct: 192 KRGLMPGLTFSNELISRDEGLHADFACLLYNMMHYTRLPDERVHEIVRGAVDVERVFISE 251
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+LP +LIGMNS LM +YI+FVADRLLV + L+
Sbjct: 252 SLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLY 286
>gi|392593078|gb|EIW82404.1| ribonucleotide reductase small subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 413
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 236/309 (76%), Gaps = 12/309 (3%)
Query: 3 SLKNETENEVNQREQGEQEQ----------EDQEPILMEQNQRFCMFPIRYKQVWEMYKK 52
+L +ET ++V R+ E+ + E +EP+L E +RF +FPI+Y ++W+MYKK
Sbjct: 56 TLGSETSDDVEARDPLEELRTKFVGDINLPESEEPLLKESKRRFVLFPIQYHEIWQMYKK 115
Query: 53 AQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQI 111
A+ASFWTAEE+DLS+D+ W RL ++E+HFISHVLAFFAASDGIV ENL RF N++Q
Sbjct: 116 AEASFWTAEEMDLSKDLHDWNNRLNNNERHFISHVLAFFAASDGIVNENLVERFSNEVQA 175
Query: 112 PEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIH 171
EAR FYGFQI MENIHSE YSLL++TYIKD ++ LF+A+E IPCV +KA WAL WI
Sbjct: 176 AEARCFYGFQIMMENIHSETYSLLIDTYIKDPAQREYLFDAVETIPCVKRKADWALRWIS 235
Query: 172 SSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 230
S FAERLV FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACL
Sbjct: 236 DQRSTFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACL 295
Query: 231 LYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
L++ +++R H + V H++ EAV IE +F+ +ALP ALIGMNS LM +YI+FVADRLLV +
Sbjct: 296 LFTHMKRRPHPEVVRHIITEAVTIEQEFLTDALPVALIGMNSKLMRRYIEFVADRLLVAL 355
Query: 291 HQCSLFIIA 299
++ +
Sbjct: 356 GNDKVYNVT 364
>gi|373954256|ref|ZP_09614216.1| ribonucleotide reductase [Mucilaginibacter paludis DSM 18603]
gi|373890856|gb|EHQ26753.1| ribonucleotide reductase [Mucilaginibacter paludis DSM 18603]
Length = 343
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/291 (63%), Positives = 226/291 (77%), Gaps = 4/291 (1%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
N +VN + QE E +L E RF + PI Y Q+WEMYKK +ASFWTAEE+DL
Sbjct: 8 NTKYKKVNTVTRMSQENE---LLLRENKDRFVILPINYPQIWEMYKKHEASFWTAEEIDL 64
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S D++ W L D E+HFISH+LAFFAASDGIV ENLA F++++Q+PEAR FYGFQI ME
Sbjct: 65 SDDMKDWNNLNDGERHFISHILAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMME 124
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFAC 185
NIHSE Y+LL++TYIKD+ EK+RLF+AIE +PCV +K +WAL WI + +FAERLV FA
Sbjct: 125 NIHSETYALLIDTYIKDTTEKNRLFHAIETVPCVKKKGEWALKWIENG-TFAERLVAFAA 183
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEG+HC+FACLLYS+L +L + V
Sbjct: 184 VEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGMHCEFACLLYSMLSNKLSKEAVT 243
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AVEIE +FV +ALP LIGMN+ LMSQYI+FVADR L + L+
Sbjct: 244 TIIADAVEIEKEFVTDALPVNLIGMNAKLMSQYIEFVADRWLQELGYDKLY 294
>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
Length = 408
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/278 (65%), Positives = 223/278 (80%), Gaps = 2/278 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP+L E QRF +FPI+Y+++W+MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 KPKTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNN 125
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E++FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 126 RLNDDERYFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYS 185
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFS
Sbjct: 186 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFS 245
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 246 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAV 305
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 306 TIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLVAL 343
>gi|424513798|emb|CCO66420.1| Ribonucleotide reductase subunit [Bathycoccus prasinos]
Length = 517
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/267 (67%), Positives = 219/267 (82%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+LM RF +FP++Y ++WE YKKA+ASFWTAEE+DL+ D + W L ++E+HFI+
Sbjct: 194 EEPLLMPNEDRFTLFPMKYPRIWEYYKKAEASFWTAEEIDLTYDYRDWITLNENEQHFIT 253
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENL RF+ +IQ+PEARAFY FQ ++ENIHSE Y+LLLETY+KD
Sbjct: 254 HVLAFFAASDGIVLENLCVRFMKEIQVPEARAFYAFQQSIENIHSETYALLLETYVKDPI 313
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
+K LF AI IP V +KA WA+ WI SS + FAERLVGFACVEGIFFSGSFCAIFWLKK
Sbjct: 314 QKRNLFRAIHTIPTVKKKADWAMKWIESSSARFAERLVGFACVEGIFFSGSFCAIFWLKK 373
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLM GLTFSNELISRDEGLHCDFAC LYS L+ +L +++H +V AV IE +FVC+AL
Sbjct: 374 RGLMKGLTFSNELISRDEGLHCDFACELYSELKHKLSEEELHEIVSNAVAIEKEFVCDAL 433
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
CAL+GMN+ LMS Y++FVADRLLV +
Sbjct: 434 SCALVGMNADLMSDYVEFVADRLLVQL 460
>gi|358397948|gb|EHK47316.1| hypothetical protein TRIATDRAFT_154508 [Trichoderma atroviride IMI
206040]
Length = 418
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 223/279 (79%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ E EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 77 KPDEIDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 136
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 137 EKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 196
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
Y+K+ +++ LFNAIE IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFSG+F +
Sbjct: 197 YVKEHSQRNYLFNAIETIPCIRKKADWAIKWIQDKDSSFAQRLVAFAAVEGIFFSGAFAS 256
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R + + ++ +AV IE +
Sbjct: 257 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEIIREIITDAVRIEQE 316
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPCAL+GMN++LM QYI+FVADRLLV + ++
Sbjct: 317 FLTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKIY 355
>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 226/289 (78%), Gaps = 3/289 (1%)
Query: 2 GSLKNETENEVNQREQGE---QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFW 58
G+ K +T ++ + + Q+ E EP+L + RF +FPI+Y +W MYK+ +ASFW
Sbjct: 162 GNTKTQTFTPLSNLQTSQPVVQQNECDEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFW 221
Query: 59 TAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFY 118
TAEE+DL QD++ WE+L EKHFI +VLAFFAASDGIV ENLA +F ++Q+PEAR FY
Sbjct: 222 TAEEIDLYQDLKDWEKLTADEKHFIKYVLAFFAASDGIVNENLAQQFCTEVQVPEARCFY 281
Query: 119 GFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAE 178
GFQIAMENIHSE YSLL++TYI D EK+ L +AI+N+P + +KA WA+ WI+++DSFAE
Sbjct: 282 GFQIAMENIHSETYSLLIDTYITDENEKNYLLHAIDNVPVIQKKAMWAMKWINNNDSFAE 341
Query: 179 RLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
RL+ FA VEGIFFSGSFCAIFW+KKR LMPGLTFSNELISRDEGLH DFACLLY + +
Sbjct: 342 RLIAFAAVEGIFFSGSFCAIFWIKKRSLMPGLTFSNELISRDEGLHTDFACLLYKHMINK 401
Query: 239 LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
L Q+VH ++ AVEIE +F+ EALP LIGMNS+LM QYI+FVADRL+
Sbjct: 402 LSIQRVHEIISSAVEIEKEFISEALPVELIGMNSNLMKQYIEFVADRLI 450
>gi|392334327|ref|XP_003753140.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Rattus norvegicus]
gi|392354916|ref|XP_003751887.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Rattus norvegicus]
Length = 390
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 220/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKV 344
>gi|340522213|gb|EGR52446.1| predicted protein [Trichoderma reesei QM6a]
Length = 417
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/273 (66%), Positives = 222/273 (81%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 77 KPEEIDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 136
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 137 EKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 196
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ +++ LFNAIE IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSG+F +
Sbjct: 197 YIKEHSQRNYLFNAIETIPCIRKKADWAIRWIQDKNSSFAQRLVAFAAVEGIFFSGAFAS 256
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R + + ++ +AV IE +
Sbjct: 257 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEVIRDIITDAVRIEQE 316
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALPCAL+GMNS+LM QYI+FVADRLLV +
Sbjct: 317 FLTEALPCALLGMNSNLMKQYIEFVADRLLVAL 349
>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
Length = 397
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 229/297 (77%), Gaps = 3/297 (1%)
Query: 2 GSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
G +K + E + E + E+ D EPIL E RF +FPI+Y ++W+MYKKA+ASFW AE
Sbjct: 44 GGVKIDPEFKKPSEEDTKSEEMD-EPILTENKHRFVLFPIKYHEIWQMYKKAEASFWVAE 102
Query: 62 EVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
E+DLS+D+ W +RL D E++FISHVLAFFAASDGIV ENL RF N++QIPEAR FYGF
Sbjct: 103 EIDLSKDMHDWSDRLNDDERYFISHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGF 162
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAER 179
QI MEN+HSE YSLL++TYIKD K++ LF+AI+ IPC+ +KA WA+ WI +S FA+R
Sbjct: 163 QIMMENVHSETYSLLIDTYIKDPKQRTYLFDAIDTIPCIKKKADWAIRWIEDRNSTFAQR 222
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
LV FA VEGIFFSGSF +IFWLKKRGLMPGL+FSNELISRDEGLH DFACLL++ L R
Sbjct: 223 LVAFAAVEGIFFSGSFASIFWLKKRGLMPGLSFSNELISRDEGLHTDFACLLFNHLNNRP 282
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
Q V ++ EAV IE +F+ EALPCAL+GMNS LM QYI+FVADRLL+ + +
Sbjct: 283 SQQAVQDIIVEAVGIEQEFLTEALPCALLGMNSKLMKQYIEFVADRLLLSLGNPKFY 339
>gi|361127540|gb|EHK99507.1| putative Ribonucleoside-diphosphate reductase small chain [Glarea
lozoyensis 74030]
Length = 439
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/280 (65%), Positives = 221/280 (78%), Gaps = 2/280 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D E+
Sbjct: 99 EEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDER 158
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++TY+
Sbjct: 159 YFISHVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYV 218
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
K+ ++ LFNAIE IPC+ +KA WA+ WI +S FA+RLV FA +EGIFFSGSF +IF
Sbjct: 219 KEQAQRTYLFNAIETIPCIKKKADWAVRWIQDKNSTFAQRLVAFAAIEGIFFSGSFASIF 278
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLM GLTFSNELISRDEG+H DFACLL+S L R Q V ++ EAVEIE +F+
Sbjct: 279 WLKKRGLMAGLTFSNELISRDEGMHTDFACLLFSHLNHRPSKQAVQDVITEAVEIEQEFL 338
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
EALPCAL+GMNS+LM QYI+FVADRLLV + + A
Sbjct: 339 TEALPCALLGMNSNLMKQYIEFVADRLLVSLGNDKFYKTA 378
>gi|396476250|ref|XP_003839975.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans JN3]
gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans JN3]
Length = 410
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/279 (64%), Positives = 222/279 (79%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+ +E EP+L E QRF +FPI+Y VW+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 65 RPEEAHEPLLQENPQRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 124
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MEN+HSE YSLL++T
Sbjct: 125 ERFFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENVHSETYSLLIDT 184
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + +++ LFNAI+NIPC+ +KA WAL WI +S FA RLV FA VEGIFFSGSF +
Sbjct: 185 YISEPRQRKYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFAS 244
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL R + V ++ EAVEIE +
Sbjct: 245 IFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVEIEKE 304
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPCAL+GMN++LM QYI+FVADRLL+ + +
Sbjct: 305 FLSDALPCALLGMNATLMCQYIEFVADRLLLSLGNTKFY 343
>gi|354494802|ref|XP_003509524.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cricetulus griseus]
gi|344243911|gb|EGW00015.1| Ribonucleoside-diphosphate reductase subunit M2 [Cricetulus
griseus]
Length = 390
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKV 344
>gi|409097319|ref|ZP_11217343.1| ribonucleoside-diphosphate reductase [Pedobacter agri PB92]
Length = 323
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 219/264 (82%), Gaps = 1/264 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+QE +L E RF + PI+Y +WEMYKK +ASFWTAEE+DLS D +HW+ L D E+HFI
Sbjct: 2 EQELLLQENKDRFVLLPIKYPAIWEMYKKTEASFWTAEEIDLSDDQKHWDNLNDGERHFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SH+LAFF+ASDGIV ENLA F++++Q+PEAR FYGFQI MENIH+E Y+LL++TYIKD
Sbjct: 62 SHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHAETYALLIDTYIKDP 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RLF+AI+ +P V +KA+WAL WI + +FAERLV FA VEGIFFSGSFC+IFWLKK
Sbjct: 122 EEKDRLFHAIDTVPAVKRKAEWALRWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWLKK 180
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEG HC+FACLLYS+L +L + VH ++ +AVEIE +F+ +AL
Sbjct: 181 RGLMPGLTFSNELISRDEGSHCEFACLLYSMLSNKLSEEAVHSIISDAVEIEKEFITDAL 240
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P ALIGMN+ LMSQYI+FVADR L
Sbjct: 241 PVALIGMNAKLMSQYIEFVADRWL 264
>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Danio rerio]
gi|3914657|sp|P79733.1|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase protein R2 class
I; AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
gi|347311297|gb|AEO79839.1| reductase M2 polypeptide variant 1 [Danio rerio]
gi|347311299|gb|AEO79840.1| reductase M2 polypeptide variant 2 [Danio rerio]
gi|347311301|gb|AEO79841.1| reductase M2 polypeptide variant 3a [Danio rerio]
gi|347311303|gb|AEO79842.1| reductase M2 polypeptide variant 3b [Danio rerio]
Length = 386
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/268 (66%), Positives = 218/268 (81%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FI
Sbjct: 65 EEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFI 124
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 125 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 184
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 185 KEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLK 244
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +A
Sbjct: 245 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLTDA 304
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN LM QYI+FVADRLL+ +
Sbjct: 305 LPVKLIGMNCDLMKQYIEFVADRLLLEL 332
>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
Length = 386
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/268 (66%), Positives = 218/268 (81%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FI
Sbjct: 65 EEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFI 124
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 125 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 184
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 185 KEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLK 244
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +A
Sbjct: 245 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLISKPSEETVKKIIMNAVEIEQEFLTDA 304
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN LM QYI+FVADRLL+ +
Sbjct: 305 LPVKLIGMNCDLMKQYIEFVADRLLLEL 332
>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
Length = 408
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/278 (65%), Positives = 222/278 (79%), Gaps = 2/278 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP+L E QRF +FPI+Y+++W+MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 KAKTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNN 125
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E+ FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 126 RLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYS 185
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFS
Sbjct: 186 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFS 245
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 246 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPEPSAVEAIITEAV 305
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 306 TIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLVAL 343
>gi|2500209|sp|Q60561.1|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
Length = 386
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKV 344
>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/272 (66%), Positives = 219/272 (80%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
++ E +E +L E RF +FP+ Y ++WEMYKKA ASFWTAEEVDL D+ W L +E
Sbjct: 13 KQLEKEEALLKENPHRFVLFPLEYPKIWEMYKKAMASFWTAEEVDLHTDITQWTTLTPNE 72
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFI VLAFFAASDGIV ENL +F+ ++QIPEAR FYGFQIA+ENIH+EMYS L+ET
Sbjct: 73 QHFIKSVLAFFAASDGIVNENLCQQFMAEVQIPEARCFYGFQIAIENIHAEMYSTLIETL 132
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
IKD +E+HRLFNAI+ +P V +KA+WA+ WI++ + FAERL+ FACVEGIFFSGSFC+IF
Sbjct: 133 IKDQRERHRLFNAIDTVPSVQKKARWAMKWINNENLFAERLLAFACVEGIFFSGSFCSIF 192
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-KRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGL FSNELISRDEGLH DFACLLYS L+ +L Q VH +V EAVEIE +F
Sbjct: 193 WLKKRGLMPGLAFSNELISRDEGLHTDFACLLYSTLKFTKLPQQVVHSLVSEAVEIEKEF 252
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+CE+LP LIGMNS LM QYI+ VADRLLV +
Sbjct: 253 ICESLPVDLIGMNSRLMQQYIEMVADRLLVSL 284
>gi|340905392|gb|EGS17760.1| hypothetical protein CTHT_0071060 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 420
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/296 (61%), Positives = 229/296 (77%), Gaps = 2/296 (0%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
N+ E E + + +E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DL
Sbjct: 60 NKAEEEKPRVAPTIRPEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDL 119
Query: 66 SQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
S+D+ W RL D E++FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI M
Sbjct: 120 SKDLHDWNNRLNDDERYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMM 179
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
ENIHSE YSLL++TYIK+ ++ LFNAIE IPC+ +KA+WAL WI S FA+RLV F
Sbjct: 180 ENIHSETYSLLIDTYIKEPAQRQHLFNAIETIPCIKKKAEWALRWIADKKSTFAQRLVAF 239
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ R Q
Sbjct: 240 AAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKHRPPKQV 299
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ ++ +AV+IE +F+ EALPCAL+GMN++LM QYI+FVADRLLV + ++ +
Sbjct: 300 IQDIIVDAVKIEQEFLTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKVYRVT 355
>gi|266918|sp|P07201.2|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit;
AltName: Full=p41
gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
solidissima]
Length = 384
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 218/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF + PI+Y +W+MYKKA+ASFWTAEEVDLS+D+ HWE L EKHFISH
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD +E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WA+ WI+ S S+AER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
G+MPGLTFSNELISRDEGLHCDFACL++S L + +++H ++ EAV+IE F+ EALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
C LIGMN LM QYI+FVADRLL+ +
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLEL 327
>gi|449284077|gb|EMC90658.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial [Columba
livia]
Length = 333
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/274 (66%), Positives = 221/274 (80%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D+EP+L + +RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FI
Sbjct: 12 DEEPLLRKNPRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFI 71
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SH+LAFFAASDGIV ENL ARF ++QIPEAR FYGFQI +EN+HSEMYSLL++TYIKD
Sbjct: 72 SHILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDP 131
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
+++ LFNAIE +PCV +KA WAL WI +S F ER+V FA VEGIFFSGSF AIFWLK
Sbjct: 132 EKRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLK 191
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L R ++VH ++ AVEIE +F+ EA
Sbjct: 192 KRGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVHEIIVNAVEIEQEFLTEA 251
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRLL+ + +F
Sbjct: 252 LPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF 285
>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
Length = 410
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 223/279 (79%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+ +E EP+L E RF +FPI+Y VW+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 66 KPEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 125
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MEN+HSE YSLL++T
Sbjct: 126 ERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDT 185
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + +++ LFNAI+NIPC+ +KA WAL WI +S FA RLV FA VEGIFFSGSF +
Sbjct: 186 YISEPRQRKYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFAS 245
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL R + V ++ EAVEIE +
Sbjct: 246 IFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNNRPSKESVRAIITEAVEIEQE 305
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPCAL+GMN++LM QYI+FVADRLL+ + ++
Sbjct: 306 FLSDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVY 344
>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
gi|77416595|sp|Q4KLN6.1|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
Length = 390
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 220/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ +V IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKV 344
>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
Length = 409
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/274 (66%), Positives = 218/274 (79%), Gaps = 2/274 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L E QRF +FPI+Y +VW+MYKKA+ASFWTAEE+DLS+D+ W +L D EK FI
Sbjct: 75 DEPLLTENPQRFVLFPIKYHEVWQMYKKAEASFWTAEEIDLSKDLHDWSNKLNDDEKFFI 134
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++TYIK+
Sbjct: 135 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
++ LFNAI+ IPC+ +KA WAL WI D SFA+RLV FA VEGIFFSG+F +IFWLK
Sbjct: 195 SQRTYLFNAIDTIPCIRKKADWALRWISDKDASFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q V ++ +AV IE +F+ EA
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLVEDIIRDAVTIEQEFLTEA 314
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 315 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKIY 348
>gi|367051116|ref|XP_003655937.1| hypothetical protein THITE_2069122 [Thielavia terrestris NRRL 8126]
gi|347003201|gb|AEO69601.1| hypothetical protein THITE_2069122 [Thielavia terrestris NRRL 8126]
Length = 415
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/273 (66%), Positives = 220/273 (80%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 75 KPEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 134
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 135 EKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 194
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAI+ IPC+ +KA WAL WI S FA+RLV FA VEGIFFSG+F +
Sbjct: 195 YIKEPAQRTHLFNAIDTIPCIRKKADWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFAS 254
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L KR Q + ++ +AV IE +
Sbjct: 255 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNKRPSKQVIQDIIVDAVRIEQE 314
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALPCAL+GMN++LM QYI+FVADRLLV +
Sbjct: 315 FLTEALPCALLGMNATLMKQYIEFVADRLLVAL 347
>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
Length = 529
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/278 (65%), Positives = 222/278 (79%), Gaps = 2/278 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP+L E QRF +FPI+Y+++W+MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 187 KPKTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNN 246
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E+ FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 247 RLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYS 306
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFS
Sbjct: 307 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFS 366
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 367 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAV 426
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 427 TIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLVAL 464
>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H143]
gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H88]
Length = 413
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/302 (61%), Positives = 230/302 (76%), Gaps = 9/302 (2%)
Query: 4 LKNETENEVNQREQGEQEQ-------EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
L +TE + E+GE++ E EP+L E RF +FP++Y ++W+MYKKA+AS
Sbjct: 50 LLKKTETSARKPEEGEKKALTGVKALEADEPLLQENPNRFVLFPLKYHEIWQMYKKAEAS 109
Query: 57 FWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEAR 115
FWTAEE+DLS+D+ W RL D E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR
Sbjct: 110 FWTAEEIDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEAR 169
Query: 116 AFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS 175
FYGFQI MENIHSE YSLL++TYIK+ K++ LF+AIE IPC+ +KA WA+ WI DS
Sbjct: 170 CFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIETIPCIRKKADWAIRWIEDKDS 229
Query: 176 -FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
FA+RLV FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S
Sbjct: 230 TFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSH 289
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCS 294
LR R + V ++ EAV IE +F+ +ALP AL+GMN+ LM QYI+FVADRLLV +
Sbjct: 290 LRHRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMNAKLMCQYIEFVADRLLVALGNKK 349
Query: 295 LF 296
++
Sbjct: 350 VY 351
>gi|345568467|gb|EGX51361.1| hypothetical protein AOL_s00054g431 [Arthrobotrys oligospora ATCC
24927]
Length = 402
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/279 (64%), Positives = 220/279 (78%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+ +E EP+L+E +RF +FPI Y +VW+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 51 KPEEADEPLLVENKKRFVLFPINYHEVWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDD 110
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF N++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 111 ERYFISHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGFQIMMENIHSETYSLLIDT 170
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKDS ++ LF+AI+ IPC+ +KA WA+ WI S FA+RLV FA VEGIFFSGSF A
Sbjct: 171 YIKDSSQRTYLFDAIDTIPCIKKKADWAIRWIEDEQSTFAQRLVAFAAVEGIFFSGSFAA 230
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV IE +
Sbjct: 231 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKADVEAVITEAVTIEQE 290
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPC L+G+N+ LM QYI+FVADRLL+ + ++
Sbjct: 291 FLTEALPCPLLGINAKLMKQYIEFVADRLLIALGNPKVY 329
>gi|340382685|ref|XP_003389849.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Amphimedon queenslandica]
Length = 389
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 221/275 (80%), Gaps = 1/275 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI++ ++W+ YKKA ASFWT EEVDLS+D+Q WE+L + E++FI H
Sbjct: 70 EPLLEENPRRFVLFPIQHTEIWQFYKKAVASFWTVEEVDLSKDLQDWEKLKEEERYFIKH 129
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF +++Q+ EAR FYGFQIAMENIHSEMYSLL++TYI D E
Sbjct: 130 VLAFFAASDGIVNENLVERFSSEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYISDKHE 189
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
LFNAIEN+PCV +KA WA++WI S DSF ER++ FA VEGIFFSGSF AIFWLKKR
Sbjct: 190 SDYLFNAIENMPCVKKKADWAINWIQSEDDSFGERVIAFAAVEGIFFSGSFAAIFWLKKR 249
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL+Y L + +++ H++ +AV IE +F+ EALP
Sbjct: 250 GLMPGLTFSNELISRDEGLHCDFACLMYKNLINKPTSERIKHIITDAVLIEQEFLTEALP 309
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
C LIGMN LM QYI+FVADRLLV + Q ++ ++
Sbjct: 310 CNLIGMNCVLMKQYIEFVADRLLVALDQPKVYNVS 344
>gi|390349734|ref|XP_798682.3| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2-like [Strongylocentrotus
purpuratus]
Length = 516
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/297 (60%), Positives = 227/297 (76%), Gaps = 3/297 (1%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
+GS + ++ + +++ E + EP+L QRF +FPI+Y VW+ YK+A ASFWT
Sbjct: 173 VGSQQGQSSRTTDDKKKAGHEMD--EPLLTPNAQRFVLFPIKYPDVWKFYKRAMASFWTT 230
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDL +D + W++L EKHF++HVLAFFAASDGIV ENL RF ++QIPEA+ FYGF
Sbjct: 231 EEVDLGEDWKDWQKLKPEEKHFVTHVLAFFAASDGIVNENLVERFSQEVQIPEAKCFYGF 290
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAER 179
QIAMENIHSEMYSLL++TY+KD EKHRLFNAI+ +P V +KA WAL WI S +S FAER
Sbjct: 291 QIAMENIHSEMYSLLIDTYVKDPTEKHRLFNAIQTMPFVKKKADWALKWIASDESTFAER 350
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
LV FA VEGIFFSGSF AIFW KKRGL+PGLTFSNELISRDEGLHCDFACLL+S L
Sbjct: 351 LVAFAAVEGIFFSGSFAAIFWFKKRGLLPGLTFSNELISRDEGLHCDFACLLFSHLNHPT 410
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ ++ +AV +E +++ EALP ALIGMN+ LM QYI+FVADRLL+ + +++
Sbjct: 411 PVSRIQEIIRDAVRLEEEYLSEALPVALIGMNARLMCQYIQFVADRLLMELKMSTIY 467
>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
Length = 409
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/280 (65%), Positives = 223/280 (79%), Gaps = 3/280 (1%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+E+E EP+L E RF +FPI+Y VW+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 65 KEEEAHEPLLQENPNRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 124
Query: 79 EKHFISHVLAFFAASDGIVLENLA-ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MENIHSE YSLL++
Sbjct: 125 ERFFISHVLAFFAASDGIVNENLVDERFSSEVQIPEARCFYGFQIMMENIHSETYSLLID 184
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFC 196
TYI + +++ LFNAI+NIPC+ +KA WAL WI +S FA RLV FA VEGIFFSGSF
Sbjct: 185 TYISEPRQRTYLFNAIDNIPCIRKKADWALKWISDKNSTFANRLVAFAAVEGIFFSGSFA 244
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
+IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL R V ++ EAVEIE
Sbjct: 245 SIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKDAVKAIITEAVEIEQ 304
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALPCAL+GMNS+LM QYI+FVADRLL+ + ++
Sbjct: 305 EFLTEALPCALLGMNSTLMCQYIEFVADRLLLALGNTKVY 344
>gi|406867406|gb|EKD20444.1| ribonucleotide reductase small subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 414
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/273 (66%), Positives = 220/273 (80%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 72 KPEEADEPLLRENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 131
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++T
Sbjct: 132 ERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDT 191
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ +K LFNAI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF +
Sbjct: 192 YIKEQSQKTYLFNAIDTIPCIKKKADWAVKWIEDKNSTFAQRLVAFAAVEGIFFSGSFAS 251
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L R Q V ++ EAVEIE +
Sbjct: 252 IFWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLNHRPSKQAVQDVITEAVEIEQE 311
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALPCAL+GMN++LM QYI+FVADRLL+ +
Sbjct: 312 FLTEALPCALLGMNANLMKQYIEFVADRLLLSL 344
>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 402
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/281 (63%), Positives = 228/281 (81%), Gaps = 2/281 (0%)
Query: 11 EVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQ 70
++ +R+ Q ED EP+L + +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+
Sbjct: 69 KLEKRKSKPQNNED-EPLLRDNPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLA 127
Query: 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
HW L D E+HFISHVLAFFAASDGIV ENL RF +IQ+ EAR FYGFQIA+ENIHSE
Sbjct: 128 HWASLKDDERHFISHVLAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAIENIHSE 187
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGI 189
MYSLL++TYI+D +E+ LFNAIE +P V +KA+WAL+WI++ + ++ ER+V FA VEGI
Sbjct: 188 MYSLLIDTYIRDPQEREYLFNAIETLPPVKRKAQWALNWINADNATYGERVVAFAAVEGI 247
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++S L + Q++ ++
Sbjct: 248 FFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFSHLTNKPSQQRIIEIIR 307
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+AV+IE +F+ +ALP +LIGMN LM QYI+FVADRLL+ +
Sbjct: 308 DAVKIEQEFLTDALPVSLIGMNKDLMKQYIEFVADRLLLDL 348
>gi|358374795|dbj|GAA91384.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
kawachii IFO 4308]
Length = 396
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 221/275 (80%), Gaps = 2/275 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLL 76
G +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 60 GIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLN 119
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL+
Sbjct: 120 DDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLI 179
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ K++ LF+AI+ IPC+A+KA WA+ WI +S FA+RLV FA VEGIFFSGSF
Sbjct: 180 DTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLVAFAAVEGIFFSGSF 239
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q V ++ EAV IE
Sbjct: 240 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGIE 299
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ +ALPCAL+GMNS LM QYI+FVADRLLV +
Sbjct: 300 QEFLTDALPCALLGMNSKLMCQYIEFVADRLLVAL 334
>gi|395328927|gb|EJF61317.1| hypothetical protein DICSQDRAFT_61362 [Dichomitus squalens LYAD-421
SS1]
Length = 354
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/268 (68%), Positives = 218/268 (81%), Gaps = 2/268 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+LME +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D E+H
Sbjct: 29 EHMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDDERH 88
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 89 FISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 148
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LF+AI+ IPC+ +KA WAL WI S FAERLV FA VEGIFFSGSF +IFW
Sbjct: 149 DPKQREHLFDAIDTIPCIKKKADWALRWISDKQSTFAERLVAFAAVEGIFFSGSFASIFW 208
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H + ++ EAVEIE +F+
Sbjct: 209 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDHIRKIITEAVEIEQEFLT 268
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLV 288
+ALP ALIGMNS LM QYI+FVADRLLV
Sbjct: 269 DALPVALIGMNSKLMCQYIEFVADRLLV 296
>gi|393245978|gb|EJD53487.1| ribonucleotide reductase small subunit [Auricularia delicata
TFB-10046 SS5]
Length = 410
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/271 (66%), Positives = 220/271 (81%), Gaps = 2/271 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
E EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ WE +L D+E+
Sbjct: 74 NEKDEPLLTESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWENKLNDNER 133
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFISH+LAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYI
Sbjct: 134 HFISHILAFFAASDGIVNENLVERFSNEVQCAEARCFYGFQIMMENIHSETYSLLIDTYI 193
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD + LF+AI+ IPC+ +KA+WAL WI DS F ERL+ FA VEGIFFSG+F +IF
Sbjct: 194 KDPARRDYLFDAIDTIPCIKRKAEWALRWITDQDSTFGERLIAFAAVEGIFFSGAFASIF 253
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEG+H DFACLL+S LRKR H V ++ EAV+IE +F+
Sbjct: 254 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRKRPHPDTVKMIITEAVKIEQEFL 313
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +LIGMNS LM+QYI+FVADRLLV +
Sbjct: 314 TDALPVSLIGMNSKLMNQYIEFVADRLLVAL 344
>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
gi|132626|sp|P11157.1|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Oxidizing Conditions. A Fully Occupied
Dinuclear Iron Cluster.
gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Reducing Conditions. A Fully Occupied
Dinuclear Iron Cluster And Bound Acetate.
gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
Length = 390
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRV 344
>gi|347311305|gb|AEO79843.1| reductase M2 polypeptide variant 3c [Danio rerio]
Length = 357
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/292 (62%), Positives = 229/292 (78%), Gaps = 5/292 (1%)
Query: 4 LKNETENEVNQREQGEQEQE----DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWT 59
L ++T ++ +G+ + + ++EP+L E RF +FPI+Y +W+MYKKA+ASFWT
Sbjct: 12 LASKTARKIFDESEGQSKAKKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWT 71
Query: 60 AEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG 119
AEEVDLS+D+QHW+ L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYG
Sbjct: 72 AEEVDLSKDLQHWDSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYG 131
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAE 178
FQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL+WI ++ + E
Sbjct: 132 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGE 191
Query: 179 RLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
R+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 192 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINK 251
Query: 239 LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ V ++ AVEIE +F+ +ALP LIGMN LM QYI+FVADRLL+ +
Sbjct: 252 PSEETVKKIIMNAVEIEQEFLTDALPVKLIGMNCDLMKQYIEFVADRLLLEL 303
>gi|353237098|emb|CCA69079.1| probable small subunit of ribonucleotide reductase [Piriformospora
indica DSM 11827]
Length = 390
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/280 (64%), Positives = 222/280 (79%), Gaps = 2/280 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
E EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ WE +L D+E+
Sbjct: 53 DEKDEPLLKESQRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWENKLNDNER 112
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFISHVLAFFAASDGIV ENL RF ++Q EAR FYGFQI MENIHSE YSLL++TYI
Sbjct: 113 HFISHVLAFFAASDGIVNENLVERFSAEVQAAEARCFYGFQIMMENIHSETYSLLIDTYI 172
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD+ ++ LF+AIENIPC+ +KA WAL WI S F ERL+ FA VEGIFFSGSF AIF
Sbjct: 173 KDAAQREYLFDAIENIPCIKRKADWALRWISDRRSTFGERLIAFAAVEGIFFSGSFAAIF 232
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LRKR H + V ++ EAV IE +F+
Sbjct: 233 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLFGHLRKRPHPETVKRIITEAVTIEQEFL 292
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +LIGMN++LM QYI+FVADRLLV + ++ +
Sbjct: 293 TDALPVSLIGMNATLMRQYIEFVADRLLVALGNDKVYNVT 332
>gi|402226169|gb|EJU06229.1| ribonucleotide reductase small subunit [Dacryopinax sp. DJM-731
SS1]
Length = 421
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/280 (64%), Positives = 224/280 (80%), Gaps = 2/280 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E EP+L +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W+ RL ++E+
Sbjct: 74 EEKDEPLLKSTQRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWQNRLNNNER 133
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYI
Sbjct: 134 HFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYI 193
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD++++ LF+AI+ IPC+ +KA WAL WI S FAERLV FA VEGIFFSGSF AIF
Sbjct: 194 KDAEQREYLFDAIDTIPCIKRKADWALKWISDKRSTFAERLVAFAAVEGIFFSGSFAAIF 253
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
W+KKRGLMPGLTFSNELISRDEG+H DFACLL+S LR+R H V ++ EAV IE F+
Sbjct: 254 WMKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVRKIITEAVLIEQTFL 313
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP ALIGMNS+LM+QYI+FVADRLLV + ++ +
Sbjct: 314 TDALPVALIGMNSNLMNQYIEFVADRLLVALGNEKVYNVT 353
>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
Length = 386
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/283 (63%), Positives = 223/283 (78%), Gaps = 1/283 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + + + + + EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D
Sbjct: 50 ETETPKSKAPKNPRLEDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKD 109
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+QHWE L EK+FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIH
Sbjct: 110 LQHWESLKKEEKYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIH 169
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVE 187
SEMYSLL++TY+KD KE+ LFNAIE +PCV +KA WAL WI +F ER+V FA VE
Sbjct: 170 SEMYSLLIDTYVKDPKEREYLFNAIETLPCVKKKADWALHWIGDKQATFGERVVAFAAVE 229
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L ++ ++V +
Sbjct: 230 GIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVVEL 289
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ +AV+IE +F+ EALP LIGMN +LM QYI+FVADRLL+ +
Sbjct: 290 ITDAVQIEQEFLTEALPVNLIGMNCTLMKQYIEFVADRLLLEL 332
>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
Length = 399
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 219/270 (81%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E+ EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL E++
Sbjct: 64 EEDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQY 123
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 124 FISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIK 183
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D ++ LFNA++ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSG+F +IFW
Sbjct: 184 DPAQRTYLFNAVDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFSGAFASIFW 243
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL+FSNELISRDEGLH DFACLL+S L+ R Q + ++ +AV IE +F+
Sbjct: 244 LKKRGLMPGLSFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVSIEQEFLT 303
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EALPCAL+GMNS+LM QYI+FVADRLLV +
Sbjct: 304 EALPCALLGMNSNLMKQYIEFVADRLLVAL 333
>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
Length = 330
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/267 (67%), Positives = 222/267 (83%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFIS 84
EP+L + RF +FPI+ +W+MYK+A+ASFWTAEE+DL+QD++ W E+L D E+HFI+
Sbjct: 7 EPLLESVDNRFVLFPIQQNDIWQMYKQAEASFWTAEEIDLAQDLKDWDEKLNDDERHFIT 66
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA FL +++ PEAR FYGFQ+A+ENIH+E YSLL++TYIKD+
Sbjct: 67 HVLAFFAASDGIVNENLAVNFLEEVKSPEARCFYGFQVAIENIHAETYSLLIDTYIKDAD 126
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EKHRLFNA+E +PCV +KA+WAL WI SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 127 EKHRLFNALETVPCVKKKAEWALRWIDKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGL+FSNELISRDEGLHCDFACLLY S ++ +L + V ++ AVEIE +FV +AL
Sbjct: 186 GLMPGLSFSNELISRDEGLHCDFACLLYNSYIKNKLPNETVVSIIKNAVEIEKEFVTDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS LMS+YI+FVADRLLV +
Sbjct: 246 PVKLIGMNSDLMSEYIEFVADRLLVEL 272
>gi|408391189|gb|EKJ70571.1| hypothetical protein FPSE_09324 [Fusarium pseudograminearum CS3096]
Length = 392
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 219/270 (81%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E+ EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL E++
Sbjct: 57 EEDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQY 116
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 117 FISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIK 176
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFW 200
D ++ LFNA++ IPC+ +KA WA+ WI + SFA+RLV FA VEGIFFSG+F +IFW
Sbjct: 177 DPAQRTYLFNAVDTIPCIRKKADWAIRWIQDKNSSFAQRLVAFAAVEGIFFSGAFASIFW 236
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL+FSNELISRDEGLH DFACLL+S L+ R Q + ++ +AV IE +F+
Sbjct: 237 LKKRGLMPGLSFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVSIEQEFLT 296
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EALPCAL+GMNS+LM QYI+FVADRLLV +
Sbjct: 297 EALPCALLGMNSNLMKQYIEFVADRLLVAL 326
>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
Length = 408
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/278 (65%), Positives = 222/278 (79%), Gaps = 2/278 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP+L E QRF +FPI+Y+++W+MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 KPKTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNN 125
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E+ FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 126 RLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYS 185
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFS
Sbjct: 186 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFS 245
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 246 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAV 305
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 306 TIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLVAL 343
>gi|395509266|ref|XP_003758922.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Sarcophilus harrisii]
Length = 438
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 221/291 (75%), Gaps = 1/291 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
E V + + EP+L E +RF +FPI Y+ +W MYKKA+ASFWTAEEVDLS
Sbjct: 100 EPSEPVKAPSEPAPSSSEDEPLLRENPRRFVIFPIEYQDIWHMYKKAEASFWTAEEVDLS 159
Query: 67 QDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMEN 126
+D+QHWE L EK+FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN
Sbjct: 160 KDIQHWEALKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMEN 219
Query: 127 IHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFAC 185
IHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA
Sbjct: 220 IHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAA 279
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 280 VEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVK 339
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 340 EIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKIF 390
>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
Length = 405
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/286 (64%), Positives = 226/286 (79%), Gaps = 2/286 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
E E ++ Q +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS
Sbjct: 54 EKPTEASKVAQSIKELEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLS 113
Query: 67 QDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
+D+ W RL D E++FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI +E
Sbjct: 114 KDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIE 173
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
NIHSE YSLL++TYIK+ K++ LF+AI+ IPC+A+KA+WA+ WI +S FA+RLV FA
Sbjct: 174 NIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIAKKAQWAMRWISDKESTFAQRLVAFA 233
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + V
Sbjct: 234 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPDKKVV 293
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ EAV IE +F+ EALP AL+GMNS LM QYI+FVADRLLV +
Sbjct: 294 EDIIVEAVAIEQEFLTEALPVALLGMNSKLMCQYIEFVADRLLVAL 339
>gi|73979721|ref|XP_540076.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Canis lupus familiaris]
Length = 394
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/274 (66%), Positives = 219/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 73 EEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 132
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 133 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 192
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 193 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 252
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEA 312
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 313 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVF 346
>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
CBS 112818]
Length = 408
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/278 (64%), Positives = 222/278 (79%), Gaps = 2/278 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP+L E QRF +FPI+Y+++W+MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 KPKTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNN 125
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E+ FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 126 RLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYS 185
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI +S F++RLV FA VEGIFFS
Sbjct: 186 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFSQRLVAFAAVEGIFFS 245
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 246 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPNAVEAIITEAV 305
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 306 TIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLVAL 343
>gi|449495040|ref|XP_002198998.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Taeniopygia guttata]
Length = 346
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 222/276 (80%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FI
Sbjct: 25 DEEPLLRKNHRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFI 84
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL ARF ++QIPEAR FYGFQI +EN+HSEMYSLL++TYIKD
Sbjct: 85 SHVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDP 144
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
K++ LFNAIE +PCV +KA WAL WI +S F ER+V FA VEGIFFSGSF AIFWLK
Sbjct: 145 KKRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLK 204
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L R ++V ++ AVEIE +F+ EA
Sbjct: 205 KRGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVCEIIVNAVEIEQEFLTEA 264
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRLL+ + +F +
Sbjct: 265 LPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFNV 300
>gi|342870144|gb|EGU73441.1| hypothetical protein FOXB_16079 [Fusarium oxysporum Fo5176]
Length = 409
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/281 (64%), Positives = 221/281 (78%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G + +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 68 GIKSEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLT 127
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
E+ F+SH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 128 ADEQFFVSHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 187
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ ++ LFNAIE IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFSG+F
Sbjct: 188 DTYIKEPAQRTYLFNAIETIPCIRKKADWAIRWIQDKDSSFAQRLVAFAAVEGIFFSGAF 247
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R Q + ++ +AV IE
Sbjct: 248 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVTIE 307
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALPCAL+GMNS LM QYI+FVADRLLV + ++
Sbjct: 308 QEFLTEALPCALLGMNSDLMKQYIEFVADRLLVALGNEKVY 348
>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
Length = 323
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 220/274 (80%), Gaps = 1/274 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
++ E +L E RF + PI Y +W+MYKK +ASFWTAEE+DLS D++ W L D E+HF
Sbjct: 3 QENEVLLRENKDRFVILPINYPAIWDMYKKHEASFWTAEEIDLSGDLKDWANLNDGERHF 62
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIV ENLA F++++Q+PEAR+FYGFQIAMENIHSE Y+LL++TY+KD
Sbjct: 63 ISHVLAFFAASDGIVNENLAINFMSEVQLPEARSFYGFQIAMENIHSETYALLIDTYVKD 122
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK RLF+AIE + CV +KA+WAL WI + SFAERLV FA VEGIFFSGSFCAIFWLK
Sbjct: 123 PVEKDRLFHAIETVECVKKKAEWALRWIENG-SFAERLVAFAAVEGIFFSGSFCAIFWLK 181
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHC+FACLLYS+L +L ++V ++ +AVEIE +F+ +A
Sbjct: 182 KRGLMPGLTFSNELISRDEGLHCEFACLLYSMLEAKLPKERVQEIIIDAVEIEKEFITDA 241
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN+ LM QYI+FVADR LV + +
Sbjct: 242 LPVKLIGMNADLMKQYIEFVADRWLVELGNSKYY 275
>gi|126303832|ref|XP_001381111.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Monodelphis domestica]
Length = 493
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/292 (62%), Positives = 222/292 (76%), Gaps = 1/292 (0%)
Query: 8 TENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
TE + ++ EP+L E +RF +FPI Y +W MYKKA+ASFWTAEEVDLS+
Sbjct: 156 TEPVTKAPNEPASPSKEDEPLLRENPRRFVIFPIEYHDIWHMYKKAEASFWTAEEVDLSK 215
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+QHWE L EK+FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENI
Sbjct: 216 DIQHWETLKSEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENI 275
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACV 186
HSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI ++ ++ ER+V FA V
Sbjct: 276 HSEMYSLLIDTYIKDPKEREFLFNAIETLPCVKKKADWALRWIGDNEATYGERVVAFAAV 335
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + +KV
Sbjct: 336 EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEEKVKE 395
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 396 IIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFRV 447
>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Ailuropoda melanoleuca]
Length = 393
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/274 (66%), Positives = 218/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 72 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 131
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 132 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 191
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 192 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 251
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 252 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVREIIINAVRIEQEFLTEA 311
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 312 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVF 345
>gi|383861071|ref|XP_003706010.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Megachile rotundata]
Length = 383
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 219/266 (82%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI++ +W+MYKKA+ASFWT EEVDLS+D W+RL SEKHFISH
Sbjct: 64 EPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDTFDWDRLTSSEKHFISH 123
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQ+AMEN+HSEMYSLL++TYI D+KE
Sbjct: 124 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIADAKE 183
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIEN+PCVA+KA WAL+WI H + +F ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 184 RDFLFNAIENLPCVAKKANWALNWINHETATFPERVVAFAAVEGIFFSGSFAAIFWLKKR 243
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ ++V ++ +AVEIE +F+ +ALP
Sbjct: 244 GLMPGLTFSNELISRDEGLHCDFACLMFKHIIQKPSSERVTSIIKDAVEIEQEFLTDALP 303
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+IGMN LM QYI+FVADRLLV +
Sbjct: 304 VEMIGMNCKLMCQYIEFVADRLLVEL 329
>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
gi|108873070|gb|EAT37295.1| AAEL010691-PA [Aedes aegypti]
Length = 397
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/286 (63%), Positives = 227/286 (79%), Gaps = 3/286 (1%)
Query: 8 TENEVNQREQGEQEQEDQ--EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+NE++ ++ EQ D EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDL
Sbjct: 58 AKNELSAAQKREQTPFDPSIEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDL 117
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ WE+L EKHFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAME
Sbjct: 118 SKDLADWEKLKSGEKHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAME 177
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSEMYSLL++TYI+DSKE+ LFNAI+N+PCV +KA WAL+WI S + F ER+V FA
Sbjct: 178 NVHSEMYSLLIDTYIRDSKEREYLFNAIDNLPCVKKKADWALNWISSKKANFGERVVAFA 237
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACL++ L ++ ++V
Sbjct: 238 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERV 297
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ EAV IE +F+ +ALP L+GMN LMSQYI+FVADRLL+ +
Sbjct: 298 IEIIREAVLIEQEFLTKALPVDLLGMNCDLMSQYIEFVADRLLLEL 343
>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
Length = 401
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/273 (66%), Positives = 221/273 (80%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E QRF +FP++Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 64 KELEAEEPLLQENPQRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDD 123
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FIS VLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 124 ERYFISRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 183
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ K++ LF A++NIPC+ +KA WA+ WI DS FA+RL+ FA VEGIFFSGSF +
Sbjct: 184 YIKEPKQRTYLFEALDNIPCIRKKADWAIRWIQDKDSTFAQRLIAFAAVEGIFFSGSFAS 243
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S +R R V ++ EAVEIE +
Sbjct: 244 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHIRHRPTPAAVEAIITEAVEIEKE 303
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ +ALPCAL+GMNS LM QYI+FVADRLLV +
Sbjct: 304 FLTDALPCALLGMNSKLMCQYIEFVADRLLVAL 336
>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
Length = 411
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 90 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 149
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 150 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 209
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 210 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 269
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 270 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 329
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 330 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRV 365
>gi|397531937|gb|AFO54478.1| ribonucleotide reductase small subunit R2i [Carassius carassius]
Length = 385
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/268 (66%), Positives = 216/268 (80%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FI
Sbjct: 64 EEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFI 123
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 124 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 183
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 184 KEREFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFWLK 243
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + V ++ AVEIE +F+ +A
Sbjct: 244 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEATVKKIIMNAVEIEQEFLTDA 303
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN LM QYI+FVADRLL+ +
Sbjct: 304 LPVKLIGMNCDLMKQYIEFVADRLLLEL 331
>gi|351701528|gb|EHB04447.1| Ribonucleoside-diphosphate reductase subunit M2 [Heterocephalus
glaber]
Length = 389
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/285 (64%), Positives = 222/285 (77%), Gaps = 1/285 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
+ +G + EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+DVQHWE
Sbjct: 59 KSKGLAPSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDVQHWEA 118
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSL
Sbjct: 119 LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 178
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSG 193
L++TYIKDSKE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSG
Sbjct: 179 LIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSG 238
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV
Sbjct: 239 SFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVR 298
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
IE +F+ EALP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 299 IEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFRV 343
>gi|347311307|gb|AEO79844.1| reductase M2 polypeptide variant 3d [Danio rerio]
Length = 334
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/268 (66%), Positives = 218/268 (81%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FI
Sbjct: 13 EEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFI 72
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 73 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 132
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 133 KEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLK 192
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +A
Sbjct: 193 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLTDA 252
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN LM QYI+FVADRLL+ +
Sbjct: 253 LPVKLIGMNCDLMKQYIEFVADRLLLEL 280
>gi|440894701|gb|ELR47090.1| Ribonucleoside-diphosphate reductase subunit M2 [Bos grunniens
mutus]
Length = 383
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 62 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEERYFI 121
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 122 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 181
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 182 KEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIFWLK 241
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 242 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEA 301
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN SLM QYI+FVADRL++ + +F +
Sbjct: 302 LPVKLIGMNCSLMKQYIEFVADRLMLELGFSKVFRV 337
>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
gi|392869916|gb|EAS28456.2| ribonucleoside-diphosphate reductase small chain [Coccidioides
immitis RS]
Length = 408
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/282 (64%), Positives = 225/282 (79%), Gaps = 2/282 (0%)
Query: 11 EVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQ 70
EV ++ +E E +EP+L E RF +FP++Y ++W+MYKKA+ASFWTAEE+DLS+D+
Sbjct: 62 EVPKKSLTPKELEAEEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLH 121
Query: 71 HWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHS 129
W RL D E++FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHS
Sbjct: 122 DWNHRLNDDERYFISRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHS 181
Query: 130 EMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEG 188
E YSLL++TYIK+ K++ LF+AI+ IPC+ +KA WA+ WI +S FA+RL+ FA VEG
Sbjct: 182 ETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFAQRLIAFAAVEG 241
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S LR R + V ++
Sbjct: 242 IFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPGPEAVQAII 301
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVEIE +F+ +ALPCAL+GMNS LM QYI+FVADRLLV +
Sbjct: 302 TEAVEIEKEFLTDALPCALLGMNSKLMCQYIEFVADRLLVAL 343
>gi|355717368|gb|AES05910.1| ribonucleotide reductase M2 polypeptide [Mustela putorius furo]
Length = 391
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/274 (66%), Positives = 218/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 71 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 130
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 131 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 190
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 191 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 250
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 251 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVREIIINAVRIEQEFLTEA 310
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 311 LPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVF 344
>gi|346644876|ref|NP_001231110.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Bos
taurus]
gi|296482361|tpg|DAA24476.1| TPA: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
Length = 389
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 343
>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
Length = 355
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 213/262 (81%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF +FPI+Y +W MYK+ +ASFWTAEE+DL QD++ WE+L EKHFI +
Sbjct: 37 EPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLYQDLKDWEKLTADEKHFIKY 96
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA +F ++Q+PEAR FYGFQIAMENIHSE YSLL++TYI D E
Sbjct: 97 VLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIAMENIHSETYSLLIDTYITDENE 156
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ L +AI+N+P + +KA WA+ WI+ +DSFAERL+ FA VEGIFFSGSFCAIFW+KKR
Sbjct: 157 KNYLLHAIDNVPVIQKKAMWAMKWINENDSFAERLIAFAAVEGIFFSGSFCAIFWIKKRS 216
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLH DFACLLY L ++ Q++H ++ AVEIE +F+ EALP
Sbjct: 217 LMPGLTFSNELISRDEGLHTDFACLLYKHLVNKMSNQRIHEIISSAVEIEKEFISEALPV 276
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMNS+LM QYI+FVADRL+
Sbjct: 277 ELIGMNSNLMKQYIEFVADRLI 298
>gi|348553865|ref|XP_003462746.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cavia porcellus]
Length = 484
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/285 (63%), Positives = 222/285 (77%), Gaps = 1/285 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
+ +G ++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 154 KSKGFAPSVEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA 213
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSL
Sbjct: 214 LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 273
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSG 193
L++TYIKDS+E+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSG
Sbjct: 274 LIDTYIKDSREREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSG 333
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L R Q+V ++ AV
Sbjct: 334 SFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHRPSEQRVKEIIVNAVR 393
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
IE +F+ EALP LIGMN LM QYI+FVADRL++ + +F +
Sbjct: 394 IEQEFLTEALPVKLIGMNCELMKQYIEFVADRLMLELGFGKVFQV 438
>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
Length = 408
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 220/266 (82%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF + PI+++QVW MYKKA ASFWTAEEVDLS+D+ HW L D+E+HFI H
Sbjct: 86 EPLLRENPSRFVILPIQHRQVWSMYKKAVASFWTAEEVDLSRDLDHWRGLKDTEQHFIKH 145
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF+ ++Q+PEAR FYGFQI +ENIHSEMYSLL++TYI D +E
Sbjct: 146 VLAFFAASDGIVNENLVERFMCEVQLPEARCFYGFQIMIENIHSEMYSLLIDTYINDPQE 205
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
KH LFNA+E +P V +KA+WA+ WI H SFAER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 206 KHMLFNAVETLPAVKRKAEWAMRWIDHKRASFAERVVAFAAVEGIFFSGSFAAIFWLKKR 265
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLT SNELISRDEGLHCDFACL++S+L K+ ++V ++ +AVEIE +F+ EALP
Sbjct: 266 GLMPGLTQSNELISRDEGLHCDFACLMFSMLHKKPPKERVIGIIMDAVEIEQEFLTEALP 325
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+L+GMNS+LM +YI+FV+DRLLV +
Sbjct: 326 VSLLGMNSTLMREYIEFVSDRLLVSL 351
>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 389
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/293 (62%), Positives = 226/293 (77%), Gaps = 10/293 (3%)
Query: 8 TENEVNQ--------REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWT 59
T N+ NQ + + E+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWT
Sbjct: 31 TSNKENQTTGAGMDLKAKWEEAEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWT 90
Query: 60 AEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFY 118
AEE+DLS+D+ W RL E+ FISH+LAFFAASDGIV ENL RF ++QIPEAR FY
Sbjct: 91 AEEIDLSKDLHDWNNRLTSDEQFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFY 150
Query: 119 GFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FA 177
GFQI MENIHSE YSLL++TYIK+ ++ LFNAIE IPC+ +KA WA+ WI DS FA
Sbjct: 151 GFQIMMENIHSETYSLLIDTYIKEPSQRTYLFNAIETIPCIRKKADWAIRWIQDKDSSFA 210
Query: 178 ERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK 237
+RLV FA VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+
Sbjct: 211 QRLVAFAAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKG 270
Query: 238 RLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
R Q + ++ +AV IE +F+ EALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 271 RASKQVIQDIITDAVTIEQEFLTEALPCALLGMNADLMKQYIEFVADRLLVAL 323
>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
Length = 323
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ E +L E RF + PI Y +VWE YK+ +ASFWTAEE+DLS D++ W L D E+HFI
Sbjct: 4 ENELLLKENKDRFVLLPINYPKVWEKYKQHEASFWTAEEIDLSADMKDWNNLNDGERHFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+HVLAFFAASDGIV ENLA F++++Q+PEAR FYGFQI MENIHSE Y+LL++TY+KD
Sbjct: 64 THVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYVKDP 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF+AIE +P V +KAKWAL WI + + FAERLV FA VEGIFFSGSFC+IFWLKK
Sbjct: 124 VEKDRLFHAIETVPAVTKKAKWALRWIENGN-FAERLVAFAAVEGIFFSGSFCSIFWLKK 182
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHC+FACLLY +L RL ++VH ++ +AV IE +F+ +AL
Sbjct: 183 RGLMPGLTFSNELISRDEGLHCEFACLLYGMLENRLPEEQVHTIIRDAVAIEKEFITDAL 242
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
P ALIGMNS LMS+YI+FVADR L + +F A
Sbjct: 243 PVALIGMNSKLMSEYIEFVADRWLSELGYTKIFNTA 278
>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
gi|30316285|sp|Q9C167.2|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
Length = 410
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 220/279 (78%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 71 KPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 130
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 131 EKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 190
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAI+ IPC+ +KA WAL WI S +FA+RLV FA VEGIFFSG+F +
Sbjct: 191 YIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFAS 250
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q + ++ +AV IE +
Sbjct: 251 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQE 310
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPCAL+GMN+ LM QYI+FVADRLLV + ++
Sbjct: 311 FLTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIY 349
>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
Length = 422
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 222/270 (82%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E +EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W R+ D+E+H
Sbjct: 83 ESEEPLLKESKRRFVLFPIQYNEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNERH 142
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL+++YIK
Sbjct: 143 FISHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDSYIK 202
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D ++ LF+AIE IPC+ +KA+WAL WI +S FAERLV FA VEGIFFSGSF +IFW
Sbjct: 203 DPAQREYLFDAIETIPCIKRKAEWALKWISDQESTFAERLVAFAAVEGIFFSGSFASIFW 262
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
+KKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H + V H++ EAV+IE +F+
Sbjct: 263 MKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVKHIIVEAVKIEQEFLT 322
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP LIGMN+ LM QYI+FVADRLLV +
Sbjct: 323 DALPVKLIGMNADLMCQYIEFVADRLLVSL 352
>gi|344280318|ref|XP_003411931.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Loxodonta africana]
Length = 386
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 65 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEERYFI 124
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 125 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 184
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 185 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 244
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 245 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIINAVRIEQEFLTEA 304
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 305 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFKV 340
>gi|358054684|dbj|GAA99610.1| hypothetical protein E5Q_06311 [Mixia osmundae IAM 14324]
Length = 474
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/276 (64%), Positives = 222/276 (80%), Gaps = 2/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
++ +EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W+ +L D+E+
Sbjct: 140 KDSEEPLLQETANRFVLFPIKYNEIWQMYKKAEASFWTAEEMDLSKDMHDWDNKLNDNER 199
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HF+SHVLAFFAASDGIV ENL RF ++Q EAR FYGFQI MENIHSE+YSLL++TYI
Sbjct: 200 HFVSHVLAFFAASDGIVNENLVERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYI 259
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
++ KE+ RLF AI+ IPC+ +KA+WAL WI S F ERLV FA VEGIFFSGSF +IF
Sbjct: 260 REPKERTRLFEAIDTIPCIQRKAQWALKWISDEKSCFGERLVAFAAVEGIFFSGSFASIF 319
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGL+FSNELISRDEGLH DFACLL+S LR+R H V ++ +AV+IE +F+
Sbjct: 320 WLKKRGLMPGLSFSNELISRDEGLHTDFACLLFSHLRRRPHPDTVQKIITDAVKIEKEFL 379
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSL 295
EALP +LIGMNS LM QYI+FVADRLL+ + +
Sbjct: 380 TEALPVSLIGMNSELMCQYIEFVADRLLIALGNAPV 415
>gi|363732458|ref|XP_001231545.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Gallus gallus]
Length = 384
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/290 (62%), Positives = 227/290 (78%), Gaps = 3/290 (1%)
Query: 4 LKNETENEVNQREQGEQ--EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
L ++T ++ Q +G ++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAE
Sbjct: 41 LASKTARKIFQESEGTPVARGAEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAE 100
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
EVDLS+D+QHWE L EK+FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ
Sbjct: 101 EVDLSKDLQHWESLKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQ 160
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERL 180
IAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WA+ WI ++ ER+
Sbjct: 161 IAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWAIRWIGDKKATYGERV 220
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L ++
Sbjct: 221 VAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPS 280
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 281 EERVKEIIMNAVLIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLEL 330
>gi|72008642|ref|XP_780110.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 412
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
++ EP+L E +RF +FPI+Y +W+ YKKA+ASFWTAEEVDLS+D+ HW L D E+H
Sbjct: 84 NKEDEPLLRENARRFVIFPIQYHDIWQFYKKAEASFWTAEEVDLSKDLDHWANLKDEERH 143
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 144 FISHVLAFFAASDGIVNENLVERFSQEVQVAEARCFYGFQIAIENIHSEMYSLLIDTYIK 203
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
DS ++ LFNA+E +PCV +KA+WAL+WI S S F R+V FA VEGIFFSGSF AIFW
Sbjct: 204 DSVQRDFLFNAVETLPCVTKKAQWALNWIGSDSADFGTRIVAFAAVEGIFFSGSFAAIFW 263
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ EAV IE +F+
Sbjct: 264 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLNNKPDEEHVQGIIKEAVAIEQEFLT 323
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPC+LIGMN+ LM +YI+FVADRLLV +
Sbjct: 324 DALPCSLIGMNAVLMKRYIEFVADRLLVEL 353
>gi|336469285|gb|EGO57447.1| small subunit of ribonucleotide reductase [Neurospora tetrasperma
FGSC 2508]
gi|350291081|gb|EGZ72295.1| small subunit of ribonucleotide reductase [Neurospora tetrasperma
FGSC 2509]
Length = 410
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 220/279 (78%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 71 KPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 130
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 131 EKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 190
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAI+ IPC+ +KA WAL WI S +FA+RLV FA VEGIFFSG+F +
Sbjct: 191 YIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFAS 250
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q + ++ +AV IE +
Sbjct: 251 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQE 310
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPCAL+GMN+ LM QYI+FVADRLLV + ++
Sbjct: 311 FLTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIY 349
>gi|338714129|ref|XP_001502384.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Equus
caballus]
Length = 413
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 92 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEERYFI 151
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 152 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 211
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 212 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 271
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 272 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEA 331
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRLL+ + +F +
Sbjct: 332 LPVRLIGMNCALMKQYIEFVADRLLLELGFNKVFRV 367
>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
CBS 513.88]
gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
gi|350639699|gb|EHA28053.1| hypothetical protein ASPNIDRAFT_56635 [Aspergillus niger ATCC 1015]
Length = 396
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/275 (66%), Positives = 220/275 (80%), Gaps = 2/275 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLL 76
G +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 60 GIKEMEASEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLN 119
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL+
Sbjct: 120 DDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLI 179
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ K++ LF+AI+ IPC+A+KA WA+ WI +S FA+RLV FA VEGIFFSGSF
Sbjct: 180 DTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLVAFAAVEGIFFSGSF 239
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q V ++ EAV IE
Sbjct: 240 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGIE 299
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ +ALP AL+GMNS LM QYI+FVADRLLV +
Sbjct: 300 QEFLTDALPVALLGMNSKLMCQYIEFVADRLLVAL 334
>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
Length = 414
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/293 (61%), Positives = 225/293 (76%), Gaps = 10/293 (3%)
Query: 14 QREQGEQ--------EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+RE+G++ + E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DL
Sbjct: 61 KREEGDKAVVAPGIKDFEADEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDL 120
Query: 66 SQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
S+D+ W ++ D EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI M
Sbjct: 121 SKDLHDWNNKINDDEKYFISHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMM 180
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
ENIHSE YSLL++TYIK+ ++ LFNAI+ IPC+ +KA WAL WI S FA RLV F
Sbjct: 181 ENIHSETYSLLIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALTWITDKKSTFATRLVAF 240
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q
Sbjct: 241 AVVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQT 300
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V +V +AV IE +F+ EALPC L+GMN++LM QYI+FVADRLLV + ++
Sbjct: 301 VQDIVTDAVNIEQEFLTEALPCGLLGMNATLMKQYIEFVADRLLVALGNEKVY 353
>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
Length = 401
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/281 (64%), Positives = 221/281 (78%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 64 GIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLN 123
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+ E++FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI +ENIHSE YSLL+
Sbjct: 124 EDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMIENIHSETYSLLI 183
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ K++ LF+AI+NIPC+A+KA WA+ WI +S F +RLV FA VEGIFFSGSF
Sbjct: 184 DTYIKEPKQRTYLFDAIDNIPCIAKKADWAIKWIQDQESTFGQRLVAFAAVEGIFFSGSF 243
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q V ++ EAV IE
Sbjct: 244 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVAIE 303
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ +ALP AL+GMNS LM QYI+FVADRLLV + F
Sbjct: 304 KEFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNNKYF 344
>gi|405977462|gb|EKC41913.1| Ribonucleoside-diphosphate reductase small chain [Crassostrea
gigas]
Length = 369
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/294 (61%), Positives = 230/294 (78%), Gaps = 5/294 (1%)
Query: 2 GSLKNETENEVNQR----EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASF 57
+ +E EN + + ++ ++ + EP+L + +RF +FPI+Y +W+MYKKA+ASF
Sbjct: 20 SKINDENENIIEKTNEPIKKTSRKPKKVEPLLEDNPRRFVVFPIQYHDIWQMYKKAEASF 79
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
WTAEEVDLS+D+ HWE L D E+HFISHVLAFFAASDGIV ENL RF ++Q EAR F
Sbjct: 80 WTAEEVDLSKDLGHWEALKDEEQHFISHVLAFFAASDGIVNENLVERFSKEVQATEARCF 139
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-F 176
YGFQIAMENIHSEMYSLL++TYIKD K++ LFNAIE +PCV +KA WA+ WI ++ F
Sbjct: 140 YGFQIAMENIHSEMYSLLIDTYIKDPKQRDYLFNAIETLPCVKKKADWAIKWIGDQEADF 199
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236
ER+V FA VEGIFFSGSF AIFWLKKRG+MPGLTFSNELISRDEGLHCDFACL++S L
Sbjct: 200 GERVVAFAAVEGIFFSGSFAAIFWLKKRGIMPGLTFSNELISRDEGLHCDFACLMFSHLL 259
Query: 237 KRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
R ++++ ++ +AV+IE +F+ EALPC LIGMN LM QYI+FVADRLL+ +
Sbjct: 260 NRPSKERIYEIICDAVKIEQEFLTEALPCNLIGMNCKLMKQYIEFVADRLLLEL 313
>gi|344272991|ref|XP_003408311.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Loxodonta africana]
Length = 386
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/292 (62%), Positives = 222/292 (76%), Gaps = 10/292 (3%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+ ENEV E EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDL
Sbjct: 21 DTNENEVKSSE---------EPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDL 71
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +E
Sbjct: 72 SKDLPHWNKLTSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIE 131
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA
Sbjct: 132 NVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFA 191
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L R ++V
Sbjct: 192 AVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNRPSEERV 251
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ AVEIE +F+ EALP LIGMNS LM QYI+FVADRLLV + +F
Sbjct: 252 REIIVNAVEIEQEFLTEALPVGLIGMNSVLMKQYIEFVADRLLVELGFSKVF 303
>gi|336271379|ref|XP_003350448.1| hypothetical protein SMAC_02161 [Sordaria macrospora k-hell]
gi|380090970|emb|CCC11503.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 410
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/287 (62%), Positives = 223/287 (77%), Gaps = 2/287 (0%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
N+ +E + + +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DL
Sbjct: 57 NKKASEAKKIAPTLKPEEAAEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDL 116
Query: 66 SQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
S+D+ W RL D E+ F+SH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI M
Sbjct: 117 SKDLHDWNNRLTDDERFFVSHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMM 176
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGF 183
ENIHSE YSLL++TYIK+ ++ LFNAI+ IPC+ +KA WAL WI S +FA+RLV F
Sbjct: 177 ENIHSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAF 236
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q
Sbjct: 237 AAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQL 296
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ ++ +AV IE +F+ EALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 297 IQDIIVDAVRIEQEFLTEALPCALLGMNADLMKQYIEFVADRLLVAL 343
>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
Length = 349
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/295 (61%), Positives = 227/295 (76%), Gaps = 5/295 (1%)
Query: 1 MGSLKNETENEVNQREQGEQEQE----DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
M S + T + + G ++ + + EP+L E +RF +FPI+Y +W+MYK+AQAS
Sbjct: 1 MNSCTSNTPTVITGYQNGHKDVDPNSVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQAS 60
Query: 57 FWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
FWT EEVDLS+D+ HW+ L EKHFISHVLAFFAASDGIV ENL RF ++Q+PEAR+
Sbjct: 61 FWTVEEVDLSKDLTHWDGLKSEEKHFISHVLAFFAASDGIVNENLVQRFSQEVQLPEARS 120
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS- 175
FYGFQI +EN+HSEMYS+L+ TYI+D KE+ LFNA++ +PCV +KA WAL WI ++S
Sbjct: 121 FYGFQILIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWISDTNST 180
Query: 176 FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235
F ERLV FA VEGIFFSGSF AI+WLKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L
Sbjct: 181 FGERLVAFAAVEGIFFSGSFAAIYWLKKRGLMPGLTYSNELISRDEGLHCNFACLIYSYL 240
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
K+ +V+ ++ +AV IE +F+ EALP LIGMN SLM QYI+FVADRLL +
Sbjct: 241 VKKPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMNCSLMKQYIEFVADRLLTDL 295
>gi|346972025|gb|EGY15477.1| ribonucleoside-diphosphate reductase small chain [Verticillium
dahliae VdLs.17]
Length = 414
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/293 (61%), Positives = 225/293 (76%), Gaps = 10/293 (3%)
Query: 14 QREQGEQ--------EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+RE+G++ + E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DL
Sbjct: 61 KREEGDKAVVAPGIKDFEADEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDL 120
Query: 66 SQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
S+D+ W ++ D EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI M
Sbjct: 121 SKDLHDWNNKINDDEKYFISHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMM 180
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
ENIHSE YSLL++TYIK+ ++ LFNAI+ IPC+ +KA WAL WI S FA RLV F
Sbjct: 181 ENIHSETYSLLIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALTWITDKKSTFATRLVAF 240
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q
Sbjct: 241 AVVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQT 300
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V +V +AV IE +F+ EALPC L+GMN++LM QYI+FVADRLLV + ++
Sbjct: 301 VQDIVTDAVTIEQEFLTEALPCGLLGMNATLMKQYIEFVADRLLVALGNEKVY 353
>gi|335306880|ref|XP_003360612.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Sus
scrofa]
Length = 401
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 80 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEERYFI 139
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 140 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 199
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 200 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 259
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEA 319
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 320 LPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRV 355
>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
posadasii str. Silveira]
Length = 408
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/282 (63%), Positives = 224/282 (79%), Gaps = 2/282 (0%)
Query: 11 EVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQ 70
E ++ +E E +EP+L E RF +FP++Y ++W+MYKKA+ASFWTAEE+DLS+D+
Sbjct: 62 EAPKKSLTPKELEAEEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLH 121
Query: 71 HWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHS 129
W RL D E++FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHS
Sbjct: 122 DWNHRLNDDERYFISRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHS 181
Query: 130 EMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEG 188
E YSLL++TYIK+ K++ LF+AI+ IPC+ +KA WA+ WI +S FA+RL+ FA VEG
Sbjct: 182 ETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFAQRLIAFAAVEG 241
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S LR R + V ++
Sbjct: 242 IFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPGPEAVQAII 301
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVEIE +F+ +ALPCAL+GMNS LM QYI+FVADRLLV +
Sbjct: 302 TEAVEIEKEFLTDALPCALLGMNSKLMCQYIEFVADRLLVAL 343
>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
Length = 390
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 217/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SH LAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 129 SHALAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER++ FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVMAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRV 344
>gi|451995294|gb|EMD87762.1| hypothetical protein COCHEDRAFT_1182649 [Cochliobolus
heterostrophus C5]
Length = 410
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/279 (64%), Positives = 221/279 (79%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+ +E EP+L E RF +FPI+Y VW+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 66 KPEEAHEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 125
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MEN+HSE YSLL++T
Sbjct: 126 ERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDT 185
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + +++ LFNAI+NIPC+ +KA WAL WI +S FA RLV FA VEGIFFSGSF +
Sbjct: 186 YISEPRQRQYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFAS 245
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL R + V ++ EAV IE +
Sbjct: 246 IFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVAIEQE 305
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPCAL+GMN+ LM QYI+FVADRLL+ + ++
Sbjct: 306 FLSDALPCALLGMNAKLMCQYIEFVADRLLLALGNTKVY 344
>gi|431911830|gb|ELK13974.1| Ribonucleoside-diphosphate reductase subunit M2 [Pteropus alecto]
Length = 364
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/266 (68%), Positives = 215/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFISH
Sbjct: 45 EPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEERHFISH 104
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDSKE
Sbjct: 105 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKE 164
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 165 REFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKR 224
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EALP
Sbjct: 225 GLMPGLTFSNELISRDEGLHCDFACLMFRHLLHKPSEQRVKEIIINAVRIEQEFLTEALP 284
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN +LM QYI+FVADRL++ +
Sbjct: 285 VKLIGMNCTLMEQYIEFVADRLMLEL 310
>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
marneffei ATCC 18224]
gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
marneffei ATCC 18224]
Length = 406
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 220/273 (80%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 67 KEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 126
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 127 ERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 186
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + K++ LF+AI+NIPC+ +KA WAL WI +S FA+RLV FA VEGIFFSGSF +
Sbjct: 187 YINEPKQRTYLFDAIDNIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGSFAS 246
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFAC+L+S L R + + + ++ +AV IE +
Sbjct: 247 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACMLFSHLNTRPNPKVIEDIIVDAVAIEQE 306
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ +ALPCAL+GMNS LM QYI+FVADRLLV +
Sbjct: 307 FLTDALPCALLGMNSKLMCQYIEFVADRLLVAL 339
>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
kw1407]
Length = 378
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/292 (61%), Positives = 227/292 (77%), Gaps = 2/292 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
+ + E N + E +EP+L E QRF +FPI+Y ++W+MYKK +ASFWTAEE+DLS
Sbjct: 42 DAKEENNTAVSAIKAAEAEEPLLKENAQRFVLFPIKYHEIWQMYKKHEASFWTAEEIDLS 101
Query: 67 QDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
+D+ W RL D E+ F+SH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI ME
Sbjct: 102 KDLHDWNNRLNDDERFFVSHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMME 161
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSE YSLL++TYIKD+ ++ LFNAI+ IPC+ +KA WAL WI +S FA+RLV FA
Sbjct: 162 NVHSETYSLLIDTYIKDTAQRTHLFNAIDTIPCIRKKADWALKWISDRESTFAQRLVAFA 221
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ R Q +
Sbjct: 222 AVEGIFFSGAFSSIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLKNRPSKQLI 281
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 282 EEIIVDAVKIEQEFLTEALPCALLGMNSTLMKQYIEFVADRLLVALGNDKVY 333
>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
Length = 355
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 51 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEERYFI 110
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 111 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 170
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 171 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 230
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 231 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEA 290
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 291 LPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRV 326
>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
M2 (Ribonucleotide reductase small subunit)
(Ribonucleotide reductase small chain) [Ciona
intestinalis]
Length = 393
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/277 (64%), Positives = 222/277 (80%), Gaps = 1/277 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ HWE L +E+ F
Sbjct: 71 KNEEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMVHWEALKPNERKF 130
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIA+ENIHSEMYSLL+ TYI+D
Sbjct: 131 ISHVLAFFAASDGIVNENLVERFAQEVQITEARFFYGFQIAIENIHSEMYSLLINTYIRD 190
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWL 201
+ E+ LFNAIE +PCV +KA+WAL WI S+S +AER++ FA VEGIFFSGSF AIFWL
Sbjct: 191 THEREFLFNAIETLPCVRKKAEWALKWISDSESTYAERIIAFASVEGIFFSGSFAAIFWL 250
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + +V +V +AV IE +F+ +
Sbjct: 251 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEARVVEIVKDAVTIEQEFLTD 310
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
ALP ALIGMN+ LM QYI+FVADRLLV + +F +
Sbjct: 311 ALPVALIGMNNKLMKQYIEFVADRLLVELGCSKVFKV 347
>gi|451851899|gb|EMD65197.1| hypothetical protein COCSADRAFT_181130 [Cochliobolus sativus
ND90Pr]
Length = 410
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/279 (64%), Positives = 221/279 (79%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+ +E EP+L E RF +FPI+Y VW+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 66 KAEEAHEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 125
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MEN+HSE YSLL++T
Sbjct: 126 ERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDT 185
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + +++ LFNAI+NIPC+ +KA WAL WI +S FA RLV FA VEGIFFSGSF +
Sbjct: 186 YISEPRQRQYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFAS 245
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL R + V ++ EAV IE +
Sbjct: 246 IFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVAIEQE 305
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPCAL+GMN+ LM QYI+FVADRLL+ + ++
Sbjct: 306 FLSDALPCALLGMNAKLMCQYIEFVADRLLLALGNTKVY 344
>gi|395828551|ref|XP_003787435.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Otolemur garnettii]
Length = 388
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/274 (65%), Positives = 219/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 67 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEERYFI 126
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 127 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 186
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
+E+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 187 QEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 246
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV+IE +F+ EA
Sbjct: 247 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVKIEQEFLTEA 306
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 307 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVF 340
>gi|397531939|gb|AFO54479.1| ribonucleotide reductase small subunit R2ii [Carassius carassius]
Length = 386
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/286 (62%), Positives = 224/286 (78%), Gaps = 5/286 (1%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+++E++ R+ +E EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDL
Sbjct: 51 DDSEDQTKARKGAVEE----EPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDL 106
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+QHW+ L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAME
Sbjct: 107 SKDLQHWDSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAME 166
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
NIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA
Sbjct: 167 NIHSEMYSLLIDTYIKDPKERDFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFA 226
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V
Sbjct: 227 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEETV 286
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ AV IE +F+ +ALP LIGMN LM QYI+FVADRLL+ +
Sbjct: 287 KKIIVNAVAIEQEFLTDALPVKLIGMNCDLMKQYIEFVADRLLLEL 332
>gi|440637324|gb|ELR07243.1| ribonucleoside-diphosphate reductase small subunit [Geomyces
destructans 20631-21]
Length = 412
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 219/273 (80%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 70 KPEEADEPLLQSNPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI +ENIH+E YSLL++T
Sbjct: 130 ERYFISHVLAFFAASDGIVNENLLERFSSEVQIPEARCFYGFQIMIENIHAETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAIE IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFSGSF +
Sbjct: 190 YIKEQAQRTYLFNAIETIPCIKKKADWAVRWIQDKDSTFAQRLVAFAAVEGIFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLM GLTFSNELISRDEGLH DFACLL+S LR R Q V ++ EAV IE +
Sbjct: 250 IFWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLRHRPSKQAVQDVITEAVSIEQE 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALPCAL+GMN++LM QYI+FVADRLL+ +
Sbjct: 310 FLTEALPCALLGMNANLMKQYIEFVADRLLLSL 342
>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 221/283 (78%), Gaps = 1/283 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + + + + EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D
Sbjct: 50 EAETTKSKAPKDPRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKD 109
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
++HWE L EK+FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIH
Sbjct: 110 LRHWESLKAEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIH 169
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVE 187
SEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI ++ ER+V FA VE
Sbjct: 170 SEMYSLLIDTYIKDPKEREYLFNAIETLPCVKKKADWALRWISDKQATYGERVVAFAAVE 229
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V +
Sbjct: 230 GIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEERVVQL 289
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ +AV+IE +F+ EALP LIGMN +LM QYI+FVADRLL+ +
Sbjct: 290 ITDAVQIEQEFLTEALPVNLIGMNCTLMKQYIEFVADRLLLEL 332
>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
Length = 349
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/295 (60%), Positives = 227/295 (76%), Gaps = 5/295 (1%)
Query: 1 MGSLKNETENEVNQREQGEQEQE----DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
M S + T + + G ++ + + EP+L E +RF +FPI+Y +W+MYK+AQAS
Sbjct: 1 MNSCTSNTPTVITGYQNGHKDVDPNSVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQAS 60
Query: 57 FWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
FWT EEVDLS+D+ HW+ L EKHFISHVLAFFAASDGIV ENL RF ++Q+PEAR+
Sbjct: 61 FWTVEEVDLSKDLTHWDGLKSEEKHFISHVLAFFAASDGIVNENLVQRFSQEVQLPEARS 120
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS- 175
FYGFQI +EN+HSEMYS+L+ TYI+D KE+ LFNA++ +PCV +KA WAL WI ++S
Sbjct: 121 FYGFQILIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWISDTNST 180
Query: 176 FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235
F ERLV FA VEGIFFSGSF AI+WLK+RGLMPGLT+SNELISRDEGLHC+FACL+YS L
Sbjct: 181 FGERLVAFAAVEGIFFSGSFAAIYWLKRRGLMPGLTYSNELISRDEGLHCNFACLMYSYL 240
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
K+ +V+ ++ +AV IE +F+ EALP LIGMN SLM QYI+FVADRLL +
Sbjct: 241 VKKPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMNCSLMKQYIEFVADRLLTDL 295
>gi|393215957|gb|EJD01448.1| ribonucleotide reductase small subunit [Fomitiporia mediterranea
MF3/22]
Length = 412
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 219/270 (81%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
EDQEP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D W+ +L D+E+H
Sbjct: 80 EDQEPLLVESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDQHDWQNKLNDNERH 139
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 140 FISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 199
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D ++ LF+A+E IPC+ +KA WAL WI S F ERLV FA VEGIFFSG+F +IFW
Sbjct: 200 DPVQREYLFDAVETIPCIKRKADWALHWISDKRSTFGERLVAFAAVEGIFFSGAFASIFW 259
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S LR+R H V ++ +AV+IE +F+
Sbjct: 260 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVKKIITDAVKIEQEFLT 319
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +LIGMN+ LM QYI+FVADRLL +
Sbjct: 320 DALPVSLIGMNAKLMCQYIEFVADRLLTAL 349
>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
[Paracoccidioides brasiliensis Pb03]
Length = 413
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 222/279 (79%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
++ E EP+L E RF +FP++Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 73 KDLEADEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 132
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++T
Sbjct: 133 ERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDT 192
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ K++ LF+AI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF +
Sbjct: 193 YIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFAS 252
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S LR R + V ++ EAV IE +
Sbjct: 253 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQE 312
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPCAL+GMN+ LM QYI+FVADRLLV + ++
Sbjct: 313 FLTDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVY 351
>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 221/283 (78%), Gaps = 1/283 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + + + + EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D
Sbjct: 50 EAETTKSKAPKDPRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKD 109
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
++HWE L EK+FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIH
Sbjct: 110 LRHWESLKAEEKYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIH 169
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVE 187
SEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI ++ ER+V FA VE
Sbjct: 170 SEMYSLLIDTYIKDPKEREYLFNAIETLPCVKKKADWALRWIGDKQATYGERVVAFAAVE 229
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V +
Sbjct: 230 GIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEERVVQL 289
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ +AV+IE +F+ EALP LIGMN +LM QYI+FVADRLL+ +
Sbjct: 290 ITDAVQIEQEFLTEALPVNLIGMNCTLMKQYIEFVADRLLLEL 332
>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 400
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 225/289 (77%), Gaps = 2/289 (0%)
Query: 4 LKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
++ TE + + +E E EP+L E RF MFPI+Y ++W+MYKKA+ASFWTAEE+
Sbjct: 47 IEKPTEKALENKPLTVKELEATEPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEI 106
Query: 64 DLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
DLS+D+ W RL D E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI
Sbjct: 107 DLSKDLHDWHNRLNDDERYFISHVLAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQI 166
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLV 181
MENIHSE YSLL++TYIK+ K++ LF+AI+ IPC+ +KA WA+ WI+ +S FA RLV
Sbjct: 167 MMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCITKKANWAIRWINDRESTFASRLV 226
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S + R
Sbjct: 227 AFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHMNHRPDP 286
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ V ++ EAV IE +F+ +ALPCAL+GMNS LM QYI+FVADRLLV +
Sbjct: 287 KVVEEIIVEAVGIEQEFLTDALPCALLGMNSKLMCQYIEFVADRLLVAL 335
>gi|444731691|gb|ELW72040.1| Ribonucleoside-diphosphate reductase subunit M2 [Tupaia chinensis]
Length = 357
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/274 (66%), Positives = 218/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 36 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEERYFI 95
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 96 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 155
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 156 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 215
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 216 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVQEIIVNAVRIEQEFLTEA 275
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 276 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVF 309
>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
sapiens]
gi|400979|sp|P31350.1|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
Length = 389
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 343
>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
Length = 378
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/278 (62%), Positives = 224/278 (80%), Gaps = 1/278 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
++ + EP+L RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D++ W+ L +E
Sbjct: 51 RDNDQNEPLLRSNPSRFVLFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLKDWDNLQPNE 110
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HF+SHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQIAMENIHSEMYSLL+ETY
Sbjct: 111 RHFVSHVLAFFAASDGIVNENLVERFAQEVQVPEARCFYGFQIAMENIHSEMYSLLIETY 170
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
IKDS E+ RLFNA+E +PC+A+KA+WA+ WI + D+ ++ER+V FA VEGIFFSGSF AI
Sbjct: 171 IKDSAERTRLFNAVETMPCIAKKAEWAMKWIGNKDAPYSERIVAFAAVEGIFFSGSFAAI 230
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELISRDEGLH DFAC+++ L + +++ +++ AV+IE +F
Sbjct: 231 FWLKKRGLMPGLTFSNELISRDEGLHTDFACVMFKHLVNKPPKERIIEIINNAVKIEQEF 290
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ +ALP +IGMN LM QYI+FVADRLL+ + L+
Sbjct: 291 LTDALPVEMIGMNCRLMRQYIEFVADRLLLELGCTKLY 328
>gi|384251438|gb|EIE24916.1| hypothetical protein COCSUDRAFT_47007 [Coccomyxa subellipsoidea
C-169]
Length = 451
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/250 (71%), Positives = 213/250 (85%)
Query: 41 IRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLEN 100
+RY+ ++EMYKKA ASFWT EEVDLSQD++ WE+L D E+HFI HVLAFFAASDGIV+EN
Sbjct: 24 VRYRDIFEMYKKAVASFWTVEEVDLSQDIRDWEKLSDDERHFIMHVLAFFAASDGIVMEN 83
Query: 101 LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVA 160
LA RF++++QIPEARAFYGFQIA+EN+HSEMYSLLLE YI+D ++K ++ AI+ +PCVA
Sbjct: 84 LAVRFMSEVQIPEARAFYGFQIAIENVHSEMYSLLLEHYIRDVEQKDKMLRAIQTVPCVA 143
Query: 161 QKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 220
+KA+WA WI S SFAERLVGFACVEGI FSGSFCAIFWLKKR LMPGLTFSNEL+SRD
Sbjct: 144 KKAEWAQRWIGSGSSFAERLVGFACVEGIHFSGSFCAIFWLKKRLLMPGLTFSNELVSRD 203
Query: 221 EGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIK 280
EGLH DFACLLYSLL+ L VH +V EAV++E +F CEAL CAL+GMN+ LM QYI
Sbjct: 204 EGLHTDFACLLYSLLQHPLDQAVVHRIVREAVDLEHEFCCEALSCALVGMNAQLMGQYIN 263
Query: 281 FVADRLLVHI 290
+VADRLLV +
Sbjct: 264 YVADRLLVAL 273
>gi|452846268|gb|EME48201.1| hypothetical protein DOTSEDRAFT_69973 [Dothistroma septosporum
NZE10]
Length = 417
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/282 (64%), Positives = 223/282 (79%), Gaps = 2/282 (0%)
Query: 17 QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERL 75
+G +E+E EPIL E RF +FPIRY ++W+MYKKA+ASFWTAEE+DLS+D+ W +RL
Sbjct: 70 EGIKEEEAVEPILQENPGRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRL 129
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MENIHSE YSLL
Sbjct: 130 NDDERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLL 189
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGS 194
++TYI + K++ LFNAI+NIPC+ +KA WAL WI +S FA RL+ FA VEGIFFSGS
Sbjct: 190 IDTYISEPKQRTYLFNAIDNIPCIRRKADWALRWISDKNSTFALRLIAFAAVEGIFFSGS 249
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F AIFWLKKRGLM GLTFSNELISRDEG+H DFACLL+S L+ + + V ++ EAV I
Sbjct: 250 FAAIFWLKKRGLMAGLTFSNELISRDEGMHTDFACLLFSHLKNKPNQALVQSIITEAVTI 309
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
E +F+ +ALPC L+GMN+ LMSQYI+FVADRLL+ + +
Sbjct: 310 EQEFLTDALPCKLLGMNAGLMSQYIEFVADRLLLALGNKKFY 351
>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
30864]
Length = 352
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/277 (66%), Positives = 216/277 (77%), Gaps = 1/277 (0%)
Query: 17 QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL 76
G + E EP+L RF +FPI+Y VW+MYKKA+ASFWTAEEVDLS+D+ W++L
Sbjct: 24 NGLSKLELDEPLLKPNPHRFVLFPIQYHDVWKMYKKAEASFWTAEEVDLSKDLNDWDKLK 83
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
E+HFISHVLAFFAASDGIV ENL RF ++QIPE R+FY FQIA+ENIHSEMYSLL+
Sbjct: 84 SEERHFISHVLAFFAASDGIVNENLLLRFSTEVQIPEVRSFYCFQIAIENIHSEMYSLLI 143
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+ YIKDS E+ +LFNAIE +PCVA+KA+WAL WI S FA RL+ FA VEGIFFSGSF
Sbjct: 144 DMYIKDSAEREKLFNAIETLPCVAKKAQWALRWISDRRSTFAHRLIAFAAVEGIFFSGSF 203
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC+L+ LL R V ++ +AV IE
Sbjct: 204 AAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACMLFGLLNNRPSNADVLAIIKDAVAIE 263
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+ +ALP ALIGMN LM YI+FVADRLLV + Q
Sbjct: 264 QEFLTDALPVALIGMNGGLMKTYIEFVADRLLVALGQ 300
>gi|149408710|ref|XP_001506085.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Ornithorhynchus anatinus]
Length = 394
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L EK+FI
Sbjct: 73 EDEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEEKYFI 132
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIK+
Sbjct: 133 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKEP 192
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 193 KEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 252
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVKEIIINAVRIEQEFLTEA 312
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRLL+ + +F +
Sbjct: 313 LPVKLIGMNCTLMKQYIEFVADRLLLELGFSKIFKV 348
>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
Length = 304
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 217/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI + +W MYKKA+ASFWT EEVDLS+D++HWERL SE+HFISH
Sbjct: 32 EPLLKENIKRFVIFPIEFPDIWHMYKKAEASFWTVEEVDLSKDLEHWERLKPSERHFISH 91
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYSLL++TYIK+ E
Sbjct: 92 VLAFFAASDGIVNENLVERFSQEVQVSEARCFYGFQIAMENVHSEMYSLLIDTYIKNPTE 151
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
KH LFNAIE +PCV +KA WAL WI H + +FAER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 152 KHFLFNAIETMPCVKKKADWALKWISHKTATFAERVVAFAAVEGIFFSGSFAAIFWLKKR 211
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ ++ ++ +AV IE +F+ EALP
Sbjct: 212 GLMPGLTFSNELISRDEGLHCDFACLMFKYVVQKPTEDEICDIIKDAVAIEQEFLTEALP 271
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN SLM +YI+FVADRLLV +
Sbjct: 272 VNLIGMNCSLMKKYIEFVADRLLVEL 297
>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
Length = 399
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 218/268 (81%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L + +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+ WE+L EKHF+
Sbjct: 75 EEEPLLRDNPRRFVVFPIQYNDIWQMYKKAEASFWTAEEVDLSKDISDWEKLKSEEKHFV 134
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYG+QIA+ENIHSEMYSLL++TY+KD
Sbjct: 135 SHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGYQIAVENIHSEMYSLLIDTYVKDP 194
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ LFNAIE +PCV +KA WAL WI+ SF ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 195 TERDFLFNAIETMPCVKEKADWALRWINDEQSSFGERVVAFAAVEGIFFSGSFASIFWLK 254
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG+MPGLTFSNELISRDEGLHCDFACL++S L+ + ++V+ ++ +AV IE F+ EA
Sbjct: 255 KRGVMPGLTFSNELISRDEGLHCDFACLMFSHLKNKPSQERVYDIIRDAVRIEQSFLTEA 314
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN LM+QYI+FVADRLL+ +
Sbjct: 315 LPVNLIGMNCKLMAQYIEFVADRLLLEL 342
>gi|402890069|ref|XP_003908316.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Papio
anubis]
Length = 389
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 217/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVF 341
>gi|345326583|ref|XP_001508783.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ornithorhynchus anatinus]
Length = 367
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/297 (60%), Positives = 227/297 (76%), Gaps = 1/297 (0%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
+G + ++ + + Q +EP+L + ++RF +FPI+Y ++W+MYK+AQASFWTA
Sbjct: 23 IGPDRTRSDRDFSSEPTENGLQPCEEPLLRKSSRRFVIFPIQYPEIWKMYKQAQASFWTA 82
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGF
Sbjct: 83 EEVDLSKDLPHWNKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGF 142
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAER 179
QI +EN+HSEMYSLL++TYIKD K++ LFNAIE +P V +KA W+L WI S F ER
Sbjct: 143 QILIENVHSEMYSLLIDTYIKDPKKREFLFNAIETMPFVKKKADWSLRWIADRQSTFGER 202
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K+
Sbjct: 203 VVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVKKP 262
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
KV ++ +AVEIE +F+ EALP LIGMN +LM QYI+FVADRLLV + +F
Sbjct: 263 SEDKVKEIIIDAVEIEQEFLTEALPVGLIGMNCTLMKQYIEFVADRLLVELGFSKVF 319
>gi|400597058|gb|EJP64802.1| ribonucleotide reductase [Beauveria bassiana ARSEF 2860]
Length = 416
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 226/294 (76%), Gaps = 2/294 (0%)
Query: 5 KNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVD 64
K + +++ G + +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+D
Sbjct: 61 KKDAKDDTPAVAPGIKPEEVDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEID 120
Query: 65 LSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIA 123
LS+D+ W RL E++FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI
Sbjct: 121 LSKDLHDWNNRLTADEQYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIM 180
Query: 124 MENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVG 182
MENIHSE YSLL++TYIK+ ++ LFNAI+ IPC+ +KA WAL WI +S FA+RLV
Sbjct: 181 MENIHSETYSLLIDTYIKEQAQRTYLFNAIDTIPCIRKKADWALRWISDKESTFAQRLVA 240
Query: 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQ 242
FA VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R +
Sbjct: 241 FAAVEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLNNRASKE 300
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ ++ +AV IE +F+ EALPC L+GMN++LM QYI+FVADRLLV + ++
Sbjct: 301 IIKTIITDAVTIEKEFLTEALPCGLLGMNATLMQQYIEFVADRLLVALGNEKIY 354
>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Pongo
abelii]
Length = 449
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 128 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 187
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 188 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 247
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 248 KEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 307
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 308 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 367
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 368 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 403
>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Oryctolagus cuniculus]
Length = 339
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
ED+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW RL EK+
Sbjct: 16 NEDEEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNRLTSDEKY 75
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 76 FISHVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 135
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 136 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 195
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F+
Sbjct: 196 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLT 255
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLL+ + +F
Sbjct: 256 EALPVGLIGMNCILMKQYIEFVADRLLMELGFSKVF 291
>gi|409080028|gb|EKM80389.1| hypothetical protein AGABI1DRAFT_113579 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198206|gb|EKV48132.1| ribonucleotide reductase beta subunit [Agaricus bisporus var.
bisporus H97]
Length = 408
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/299 (60%), Positives = 233/299 (77%), Gaps = 3/299 (1%)
Query: 1 MGSLKNETENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWT 59
+G ++++ +E+ + GE + E EP+L + +RF +FPI+Y ++W+MYKKA+ASFWT
Sbjct: 55 IGDAEDDSLSELRSKFVGEVDLPESDEPLLKDSRRRFVLFPIQYPEIWQMYKKAEASFWT 114
Query: 60 AEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFY 118
AEE+DLS+D+ W R+ D+E+HFISHVLAFFAASDGIV ENL RF N++Q EAR FY
Sbjct: 115 AEEMDLSKDLHDWTNRMNDNERHFISHVLAFFAASDGIVNENLIERFSNEVQAAEARCFY 174
Query: 119 GFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FA 177
GFQI MENIHSE YSLL++TYIKD ++ LF+AIE IPC+ +KA+WAL WI S FA
Sbjct: 175 GFQIMMENIHSETYSLLIDTYIKDPVQRDYLFDAIETIPCIKRKAEWALKWISDKRSTFA 234
Query: 178 ERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK 237
ERL+ FA VEGIFFSGSF +IFW+KKRGLMPGLTFSNELISRDEG+H DFACLL+S L++
Sbjct: 235 ERLIAFAAVEGIFFSGSFASIFWMKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKR 294
Query: 238 RLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
R H + V ++ EAV IE +F+ +ALP LIGMN+ LM QYI+FVADRLLV + L+
Sbjct: 295 RPHPEVVKAIITEAVVIEQEFLTDALPVKLIGMNAELMCQYIEFVADRLLVALGNEKLY 353
>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis ER-3]
gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
Length = 413
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/281 (63%), Positives = 223/281 (79%), Gaps = 2/281 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G + E +EP+L E RF +FP++Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 71 GMKALEAEEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLN 130
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E++FISHVLAFFAASDGIV ENL RF +++Q+PEAR FYGFQI MENIHSE YSLL+
Sbjct: 131 DDERYFISHVLAFFAASDGIVNENLVERFSSEVQVPEARCFYGFQIMMENIHSETYSLLI 190
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYIK+ K++ LF+AI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF
Sbjct: 191 DTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIEDKESSFAQRLVAFAAVEGIFFSGSF 250
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S LR R + V ++ EAV IE
Sbjct: 251 ASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVERIITEAVTIE 310
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ +ALP AL+GMN+ LM QYI+FVADRLLV + ++
Sbjct: 311 QEFLSDALPVALLGMNAKLMCQYIEFVADRLLVALGNKKVY 351
>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
sapiens]
Length = 449
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 128 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 187
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 188 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 247
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 248 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 307
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 308 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 367
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 368 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 403
>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
Length = 390
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 218/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+LM+ +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D++ W+ L SE+HFISH
Sbjct: 71 EPLLMDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWDSLKPSERHFISH 130
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYSLL++TYI+D KE
Sbjct: 131 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 190
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WA++WI S + + ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 191 RDFLFNAIETLPCVKRKADWAMNWISSKKANYGERIVAFAAVEGIFFSGSFAAIFWLKKR 250
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L ++ ++V ++ +AV IE +F+ +ALP
Sbjct: 251 GLMPGLTFSNELISRDEGLHCDFACLMFKYLVQKPSRKRVTDIIRDAVMIEQEFLTKALP 310
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
++GMN LMSQYI+FVADRLLV +
Sbjct: 311 VDMLGMNCELMSQYIEFVADRLLVEL 336
>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica CLIB122]
Length = 403
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 219/279 (78%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L E ++RF +FPI+Y ++W+MYKKA+ASFWTAEE+DL +D+ WE RL +
Sbjct: 71 RESEKDEPLLKENHRRFVLFPIQYHEIWQMYKKAEASFWTAEEIDLGKDMGDWENRLNND 130
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF ++Q PEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 131 ERFFISHVLAFFAASDGIVNENLVERFSGEVQAPEAKCFYGFQIMMENIHSETYSLLIDT 190
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE+ LFNAIE IPC+ +KA WAL WI +S F ERL+ FA VEGIFFSGSF +
Sbjct: 191 YIKDPKERTYLFNAIETIPCIKKKADWALKWISDEESTFGERLIAFAAVEGIFFSGSFAS 250
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + V ++ EAV IE +
Sbjct: 251 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLENRPSKKIVEDVIVEAVGIEQE 310
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ +ALPC L+GMN+ LM QYI+FVADRLLV + ++
Sbjct: 311 FLTDALPCGLLGMNAKLMCQYIEFVADRLLVALGNSKVY 349
>gi|397513395|ref|XP_003827001.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Pan
paniscus]
Length = 449
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 128 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 187
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 188 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 247
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 248 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 307
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 308 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 367
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 368 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 403
>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
Length = 418
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 226/288 (78%), Gaps = 3/288 (1%)
Query: 12 VNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQ 70
+ +R GE E E +EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+
Sbjct: 77 LQKRFVGEVELPESEEPLLLESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLH 136
Query: 71 HWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHS 129
W RL DSE+ FIS VLAFFAASDGIV ENL RF N++Q+ EAR FYGFQI MENIHS
Sbjct: 137 DWNNRLNDSERFFISRVLAFFAASDGIVNENLLERFSNEVQVAEARCFYGFQIMMENIHS 196
Query: 130 EMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEG 188
E YSLL++TYIKD E+ LF+AIE IPC+ +KA+WAL WI S F ERLV FA VEG
Sbjct: 197 ETYSLLIDTYIKDPVERDFLFDAIETIPCIKRKAEWALRWISDEHSVFGERLVAFAAVEG 256
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF +IFW+KKRGLMPGL FSNELISRDEG+H DFACLL+S LR+R H V ++
Sbjct: 257 IFFSGSFASIFWMKKRGLMPGLAFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVERII 316
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAV IE +F+ +ALP +LIGMN++LM QYI+FVADRLLV + L+
Sbjct: 317 KEAVAIEQEFLTDALPVSLIGMNATLMCQYIEFVADRLLVALGNKKLY 364
>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
Length = 449
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 128 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 187
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 188 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 247
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 248 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 307
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 308 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 367
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 368 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 403
>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
Af293]
gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus Af293]
gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus A1163]
Length = 405
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/292 (62%), Positives = 226/292 (77%), Gaps = 2/292 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
E E ++ Q +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS
Sbjct: 54 EKPTEASKVAQSIKELEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLS 113
Query: 67 QDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
+D+ W RL D E++FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI +E
Sbjct: 114 KDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIE 173
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
NIHSE YSLL++TYIK+ K++ LF+AI+ IPC+ +KA+WA+ WI +S FA+RLV FA
Sbjct: 174 NIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKAQWAMRWISDKESTFAQRLVAFA 233
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + +
Sbjct: 234 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPDKKVI 293
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ EAV IE +F+ +ALP AL+GMNS LM QYI+FVADRLLV + F
Sbjct: 294 EDIIVEAVAIEQEFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYF 345
>gi|410250512|gb|JAA13223.1| ribonucleotide reductase M2 [Pan troglodytes]
gi|410250514|gb|JAA13224.1| ribonucleotide reductase M2 [Pan troglodytes]
Length = 449
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 128 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 187
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 188 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 247
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 248 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 307
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 308 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 367
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 368 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 403
>gi|410034790|ref|XP_003949799.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 [Pan troglodytes]
Length = 456
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/286 (62%), Positives = 221/286 (77%), Gaps = 1/286 (0%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE 73
Q+ + + EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 125 QKSKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE 184
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYS
Sbjct: 185 SLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYS 244
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFS 192
LL++TYIKD KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFS
Sbjct: 245 LLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFS 304
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV
Sbjct: 305 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAV 364
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
IE +F+ EALP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 365 RIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 410
>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
Length = 331
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/268 (66%), Positives = 222/268 (82%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W+ R+ D+E+HFI
Sbjct: 6 EEPLLKESIRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWQNRMNDNERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++TYI+++
Sbjct: 66 SHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIREA 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ LFNA+E IPCVA+KA+WAL WI+ SF RLV FA VEGIFFSGSF +IFWLK
Sbjct: 126 AEREHLFNAVETIPCVARKAQWALRWINDDRSSFGIRLVAFAAVEGIFFSGSFASIFWLK 185
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELI+RDEG+H DFACLL++ LR+R H V ++ EAV IE +F+ +A
Sbjct: 186 KRGLMPGLTFSNELITRDEGMHTDFACLLFAHLRRRPHPDVVRRIIMEAVTIEQEFLTDA 245
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP +LIGMNS+LM QYI+FVADRLLV +
Sbjct: 246 LPVSLIGMNSTLMCQYIEFVADRLLVAL 273
>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
NPV]
Length = 333
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 217/267 (81%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L E +RF MFPI Y +W MYKKA+ASFWT EEVDLS+D+ W+ L +SE++FI
Sbjct: 11 DEPLLQENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDLSDWDSLKESERNFIK 70
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN+HSEMYSLL++TY+KD+
Sbjct: 71 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYVKDND 130
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLFNAIE +P +A+KA+W++ WI S+ +FAERL+ FA VEGIFFSGSF AIFW+KK
Sbjct: 131 EKRRLFNAIETMPAIAKKAEWSIKWIKSATATFAERLIAFAAVEGIFFSGSFAAIFWMKK 190
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLH DFACL+YS + + ++ ++ EAV IE +FV EAL
Sbjct: 191 RGLMPGLTFSNELISRDEGLHTDFACLMYSHIVNKPTRDRILDIITEAVAIENEFVTEAL 250
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P A++GMN+ LMS+YI+FVADRLL+ +
Sbjct: 251 PVAMLGMNNDLMSKYIEFVADRLLLEL 277
>gi|449302142|gb|EMC98151.1| hypothetical protein BAUCODRAFT_66775 [Baudoinia compniacensis UAMH
10762]
Length = 421
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/276 (66%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
Query: 17 QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERL 75
+G +E E EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W +RL
Sbjct: 72 EGIKEDEASEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRL 131
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+ FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL
Sbjct: 132 NDDERFFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLL 191
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGS 194
++TYI + K++ LFNAI+NIPC+ +KA WAL WI +S FA RL+ FA VEGIFFSGS
Sbjct: 192 IDTYISEPKQRQYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAVEGIFFSGS 251
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F +IFWLKKRGLM GLTFSNELISRDEG+H DFACLLYS LR + + V ++ EAV I
Sbjct: 252 FASIFWLKKRGLMAGLTFSNELISRDEGMHTDFACLLYSHLRHKPSKELVTKIITEAVVI 311
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+ +ALPCAL+GMNS LM QYI+FVADRL V +
Sbjct: 312 EQEFLSDALPCALLGMNSKLMCQYIEFVADRLFVAL 347
>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 218/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D++ WE L SE+HFISH
Sbjct: 81 EPLLRDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWETLKPSERHFISH 140
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYSLL++TYI+DSKE
Sbjct: 141 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKE 200
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WAL+WI S + F ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 201 REFLFNAIETLPCVKRKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFAAIFWLKKR 260
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L ++ ++V ++ +AV IE +F+ +ALP
Sbjct: 261 GLMPGLTFSNELISRDEGLHCDFACLMFKYLVQKPSKERVTEIIRDAVLIEQEFLTKALP 320
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
++GMN LMSQYI+FVADRLL+ +
Sbjct: 321 VDMLGMNCDLMSQYIEFVADRLLLEL 346
>gi|75076796|sp|Q4R7Q7.1|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
Length = 389
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV +E +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 343
>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
PN500]
Length = 335
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 218/267 (81%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+EPIL E RF +FPI+Y +W+MYKKA+ASFWTAEE+DL+ D+ WE +L D+E+HFI
Sbjct: 6 EEPILKENKDRFVLFPIKYADIWQMYKKAEASFWTAEEIDLAGDIGDWENKLNDNERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
++VLAFFAASDGIV ENLA +F++++QIPEAR FYGFQIA+ENIHSE YSLL++TYIKDS
Sbjct: 66 TNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIKDS 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+ K +F+AI+ IP V +KA WAL WI +S SFAERLV FA VEGIFFSGSFC+IFWLKK
Sbjct: 126 ETKRNIFHAIDTIPAVKKKADWALRWISNSKSFAERLVAFAAVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLM GLTFSNELISRDEGLHCDFACLLY L+ +L + ++ +AV E +F+ E+L
Sbjct: 186 RGLMHGLTFSNELISRDEGLHCDFACLLYQKLQNKLDNNTIETIIRDAVACEKEFITESL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS MSQYI+F ADRLL+ +
Sbjct: 246 PVDLIGMNSRSMSQYIEFCADRLLLSL 272
>gi|443728153|gb|ELU14627.1| hypothetical protein CAPTEDRAFT_162025 [Capitella teleta]
Length = 321
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/264 (68%), Positives = 217/264 (82%), Gaps = 1/264 (0%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L + +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+DV HWE+L E+HFISHVL
Sbjct: 1 MLRDNPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDVSHWEQLKPDERHFISHVL 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIV ENL RF ++Q+ EAR FYGFQIA+ENIHSEMYSLL++TYIKD EK
Sbjct: 61 AFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAIENIHSEMYSLLIDTYIKDMTEKE 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
LFNAIE +PCV +KA WAL WI+ S S+AER+V FA VEGIFFSGSF AIFWLKKRG+
Sbjct: 121 YLFNAIETMPCVKEKADWALRWINDSQSSYAERVVAFAAVEGIFFSGSFAAIFWLKKRGV 180
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
MPGLTFSNELISRDEGLHCDFACL++S L + +K++ ++ +AV IE +F+ EALPC
Sbjct: 181 MPGLTFSNELISRDEGLHCDFACLMFSHLVHKPSQEKIYIIIRDAVRIEQKFLTEALPCN 240
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LM QYI+FVADRLLV +
Sbjct: 241 LIGMNCDLMKQYIEFVADRLLVEL 264
>gi|436834327|ref|YP_007319543.1| Ribonucleoside-diphosphate reductase [Fibrella aestuarina BUZ 2]
gi|384065740|emb|CCG98950.1| Ribonucleoside-diphosphate reductase [Fibrella aestuarina BUZ 2]
Length = 330
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 220/275 (80%), Gaps = 2/275 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF +FPI++ +W+MYKK +ASFWTAEE+DL QD++ W L D E+HFISH
Sbjct: 8 EPLLEEDKSRFVLFPIKHNDIWQMYKKHEASFWTAEEIDLGQDLKDWNSLSDGERHFISH 67
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA FL+++Q EA+ FYGFQI MENIHSE YSLL++TYIKD E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIMMENIHSETYSLLIDTYIKDPIE 127
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K R+ NAI+ IPCV +KA WAL WI S+ SFAERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 128 KDRMLNAIDTIPCVQKKADWALRWI-SNGSFAERLIAFAAVEGIFFSGSFCSIFWLKKRG 186
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLH DFACLLY+ +R ++ Q ++ ++ AVEIE +FV +ALP
Sbjct: 187 LMPGLTFSNELISRDEGLHRDFACLLYTDHIRNKMDPQAIYDIIRNAVEIEQEFVSDALP 246
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+LIGMN+ LM QYI+FVAD LLV + S++ ++
Sbjct: 247 VSLIGMNADLMKQYIEFVADHLLVSLGLNSIYNVS 281
>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
Length = 406
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 220/275 (80%), Gaps = 2/275 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLL 76
G +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL
Sbjct: 65 GIKEMEVNEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLN 124
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E++F+S VLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 125 DDERYFVSRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 184
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI + K++ LF+AI+NIPC+ +KA WAL WI +S FA+RLV FA VEGIFFSGSF
Sbjct: 185 DTYINEPKQRTYLFDAIDNIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGSF 244
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + + + ++ +AV IE
Sbjct: 245 AAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPNPKVIEDIIVDAVAIE 304
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ +ALPC+L+GMNS LM QYI+FVADRLLV +
Sbjct: 305 QEFLTDALPCSLLGMNSKLMCQYIEFVADRLLVAL 339
>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Bos taurus]
gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Bos
taurus]
gi|296480530|tpg|DAA22645.1| TPA: ribonucleotide reductase M2 polypeptide-like [Bos taurus]
Length = 351
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/293 (60%), Positives = 223/293 (76%), Gaps = 1/293 (0%)
Query: 5 KNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVD 64
+ + E ++ + + D+EP+L + ++RF +FPI+Y +W+MYKKAQASFWTAEEVD
Sbjct: 11 RPQPEERLSSDTNENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVD 70
Query: 65 LSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
LS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +
Sbjct: 71 LSKDLPHWNKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILI 130
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V F
Sbjct: 131 ENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAF 190
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++
Sbjct: 191 AAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEER 250
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 251 VREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVF 303
>gi|402079098|gb|EJT74363.1| ribonucleoside-diphosphate reductase small subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 420
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/274 (63%), Positives = 219/274 (79%), Gaps = 2/274 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W +L + EK+FI
Sbjct: 81 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKLNEDEKYFI 140
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++TYIK+
Sbjct: 141 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 200
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
++ LFNA++ IPC+ +KA WAL WI +S FA RL+ FA VEGIFFSG+F +IFWLK
Sbjct: 201 AQRTYLFNAVDTIPCIRKKADWALKWISDKESTFASRLIAFAAVEGIFFSGAFASIFWLK 260
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLH DFACLL+S ++ R + V ++ +AV IE +F+ EA
Sbjct: 261 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHMKNRPSKETVQKIIVDAVNIEQEFLTEA 320
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 321 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKVY 354
>gi|73974198|ref|XP_539109.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Canis lupus familiaris]
Length = 351
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 223/292 (76%), Gaps = 10/292 (3%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+ ENEV + D+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDL
Sbjct: 21 DTNENEV---------KSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDL 71
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +E
Sbjct: 72 SKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIE 131
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA
Sbjct: 132 NVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFA 191
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 192 AVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERV 251
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 252 REIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 303
>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
Length = 337
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/276 (63%), Positives = 216/276 (78%), Gaps = 1/276 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
++ +E E +EP+L E R+ +FPI+Y +W+ YKKA++S WT EE+DL D+ WE+L
Sbjct: 7 KRSAKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVEEIDLGNDMTDWEKL 66
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L
Sbjct: 67 DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
++TY+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSF
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSF 186
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEI 254
CAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV I
Sbjct: 187 CAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSI 246
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|406025255|ref|YP_006705556.1| ribonucleoside-diphosphate reductase subunit M2 [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404432854|emb|CCM10136.1| Ribonucleoside-diphosphate reductase subunit M2 [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 331
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 218/266 (81%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF +FPI ++ +W YK+A+ASFWTAEE+DLSQD++ WE L+ EKHFI+H
Sbjct: 9 EPLLQENKNRFVLFPIEHQDIWGFYKQAEASFWTAEEIDLSQDIKDWENLISGEKHFITH 68
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL F N++Q EA+ FYGFQIA+ENIHSE YSLL++TY+KD KE
Sbjct: 69 VLAFFAASDGIVNENLVQNFANEVQYTEAKFFYGFQIAIENIHSEAYSLLIDTYVKDPKE 128
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+HRLFNAIE I V +KA WAL WI S SF ERL+ FA VEGIFFSGSFCAIFWLKKRG
Sbjct: 129 RHRLFNAIETIEWVGKKADWALRWI-SKGSFPERLIAFAAVEGIFFSGSFCAIFWLKKRG 187
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLHCDFACLLY+ ++ +L Q+V ++ +AV IE++FV +ALP
Sbjct: 188 LMPGLTFSNELISRDEGLHCDFACLLYNAHIKHKLPEQQVAQIIADAVAIESEFVSDALP 247
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN++LM+QYI+FVADRLL+ +
Sbjct: 248 VKLIGMNATLMTQYIQFVADRLLLEL 273
>gi|395818124|ref|XP_003782487.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Otolemur garnettii]
Length = 351
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/292 (62%), Positives = 222/292 (76%), Gaps = 10/292 (3%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+ ENEV E EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDL
Sbjct: 21 DANENEVKSNE---------EPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDL 71
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW +L EK FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +E
Sbjct: 72 SKDLPHWNKLKSDEKCFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIE 131
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSEMYSLL++TYI+D KE+ LFNAIE +PCV +KA WAL WI S F ER+V FA
Sbjct: 132 NVHSEMYSLLIDTYIRDPKEREFLFNAIETMPCVKKKADWALRWIADRKSTFGERVVAFA 191
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 192 AVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFRYLVNKPSEERV 251
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ EAV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 252 REIIIEAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIF 303
>gi|126322530|ref|XP_001380256.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Monodelphis domestica]
Length = 361
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/276 (64%), Positives = 220/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 38 KSSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKY 97
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +ENIHSEMYSLL++TYIK
Sbjct: 98 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENIHSEMYSLLIDTYIK 157
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D +++ LFNAIE +PCV +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 158 DPQKREFLFNAIETMPCVKRKADWALQWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 217
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F+
Sbjct: 218 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNKPSEERVKEIIINAVEIEQEFLT 277
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ALP LIG+NS+LM QYI+FVADRLLV + +F
Sbjct: 278 DALPVGLIGINSTLMKQYIEFVADRLLVELGFSKVF 313
>gi|440903111|gb|ELR53814.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial [Bos
grunniens mutus]
Length = 336
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/278 (63%), Positives = 218/278 (78%), Gaps = 1/278 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+ + D+EP+L + ++RF +FPI+Y +W+MYKKAQASFWTAEEVDLS+D+ HW +L E
Sbjct: 11 EAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TY
Sbjct: 71 KYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
I+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AI
Sbjct: 131 IRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAI 190
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F
Sbjct: 191 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 251 LTEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVF 288
>gi|410987580|ref|XP_004000076.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Felis
catus]
Length = 351
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 223/292 (76%), Gaps = 10/292 (3%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+ ENEV + ++EP+L + ++RF +FPI+Y +W+MYKKAQASFWTAEEVDL
Sbjct: 21 DSNENEV---------KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDL 71
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +E
Sbjct: 72 SKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIE 131
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA
Sbjct: 132 NVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFA 191
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 192 AVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERV 251
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 252 REIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 303
>gi|118087248|ref|XP_418364.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Gallus gallus]
Length = 353
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 219/273 (80%), Gaps = 1/273 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L + +RF +FPI++ +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FIS
Sbjct: 33 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 92
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL ARF ++QIPEAR FYGFQI +EN+HSEMYSLL++TYIKD +
Sbjct: 93 HVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 152
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
++ LFNAIE +PCV +KA WAL WI +S F ER+V FA VEGIFFSGSF AIFWLKK
Sbjct: 153 KRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL++ L R ++V ++ AVEIE +F+ EAL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 272
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
P LIGMN +LM QYI+FVADRLL+ + +F
Sbjct: 273 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF 305
>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Anolis carolinensis]
Length = 414
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/276 (63%), Positives = 217/276 (78%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + +RF +FPI Y +W+MYKKAQASFWTAEEVDLS+D HW +L EK+
Sbjct: 91 KSNEEPLLRKNPRRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDFPHWNKLKSEEKY 150
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYIK
Sbjct: 151 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIK 210
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFW 200
D +E+ LFNAIE +PCV +KA WAL WI +F ER+V FA VEGIFFSG+F AIFW
Sbjct: 211 DPEERDFLFNAIETMPCVKKKADWALRWIRDRKATFGERVVAFASVEGIFFSGAFAAIFW 270
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F+
Sbjct: 271 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLT 330
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN +LM QYI+FVADRLL+ + +F
Sbjct: 331 EALPVGLIGMNCTLMKQYIEFVADRLLLELGFSKVF 366
>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 414
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 217/270 (80%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E +EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W +L D+E+H
Sbjct: 80 ESEEPLLKESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNKLNDNERH 139
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 140 FISHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIK 199
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D ++ LF+A++ IPC+ +KA WAL WI S FAERLV FA VEGIFFSGSF +IFW
Sbjct: 200 DPAQRDYLFDAVDTIPCIKKKADWALTWISDQKSTFAERLVAFAAVEGIFFSGSFASIFW 259
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S L++R H V ++ EAV IE +F+
Sbjct: 260 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDVVKRIITEAVAIEQEFLT 319
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP LIGMN+ LM QYI+FVADRLLV +
Sbjct: 320 DALPVKLIGMNAELMCQYIEFVADRLLVSL 349
>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Apis mellifera]
Length = 384
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 218/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI++ +W+MYKKA+ASFWT EEVDLS+DV W L SEKHFISH
Sbjct: 65 EPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNNLTASEKHFISH 124
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQ+AMEN+HSEMYSLL++TYI D+KE
Sbjct: 125 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIADAKE 184
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIEN+PCVA+KA WAL+WI H S +F ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 185 RDFLFNAIENLPCVAKKAHWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKR 244
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ ++V ++ +AV+IE +F+ +ALP
Sbjct: 245 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCERVTSIIKDAVKIEQEFLTDALP 304
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+IGMN LM QYI+FVADRLLV +
Sbjct: 305 VEMIGMNCKLMCQYIEFVADRLLVEL 330
>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
Length = 336
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/278 (63%), Positives = 219/278 (78%), Gaps = 1/278 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+ + D+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L E
Sbjct: 11 EAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TY
Sbjct: 71 KYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
I+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AI
Sbjct: 131 IRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAI 190
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F
Sbjct: 191 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 251 LTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 288
>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
Length = 397
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/289 (63%), Positives = 226/289 (78%), Gaps = 3/289 (1%)
Query: 5 KNETENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
++ +N V R GE + E++EPIL E RF +FPIRY ++W+MYKKA+ASFWTAEE+
Sbjct: 49 RSAIDNYVYGRFVGEVDLPEEEEPILKENKGRFVLFPIRYHEIWQMYKKAEASFWTAEEI 108
Query: 64 DLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
DLS+D+ W+ R+ D E+HF+SHVLAFFAASDGIV ENL RF ++Q EAR FYGFQI
Sbjct: 109 DLSKDLYDWDNRMTDPERHFVSHVLAFFAASDGIVNENLVERFSAEVQATEARCFYGFQI 168
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLV 181
MENIHSE YSLL++TYI++ + + LFNAIE +P V QKA WAL WI SF+ERLV
Sbjct: 169 MMENIHSETYSLLIDTYIREPERRDFLFNAIETVPVVKQKADWALRWISDHRASFSERLV 228
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSF +IFWLKKRGLMPGL+FSNELISRDEGLH DFACLL+S L+KR H
Sbjct: 229 AFAAVEGIFFSGSFASIFWLKKRGLMPGLSFSNELISRDEGLHTDFACLLFSHLKKRAHP 288
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V+ ++ EAV+IE F+ +ALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 289 DTVNRIITEAVDIEQDFLTDALPVSLIGMNARLMCQYIEFVADRLLVAL 337
>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
Length = 409
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/277 (63%), Positives = 218/277 (78%), Gaps = 2/277 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W ++ D EK
Sbjct: 72 DEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEK 131
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++TYI
Sbjct: 132 YFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYI 191
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
K+ ++ LFNAI+ IP + +KA WAL WI S FA+RLV FA VEGIFFSG+F +IF
Sbjct: 192 KEPAQRTHLFNAIDTIPAIRKKADWALRWITDQKSTFAQRLVAFAAVEGIFFSGAFASIF 251
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q + ++ +AV IE +F+
Sbjct: 252 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQIIEDIIVDAVRIEQEFL 311
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALPCAL+GMNS+LM QYI+FVADRLLV + ++
Sbjct: 312 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVY 348
>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
Length = 386
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 214/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FISH
Sbjct: 67 EPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKTDERYFISH 126
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD KE
Sbjct: 127 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 186
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WAL WI ++ ER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 187 RGFLFNAIETLPCVKKKADWALRWISDKQATYGERVVAFAAVEGIFFSGSFASIFWLKKR 246
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV+IE +F+ EALP
Sbjct: 247 GLMPGLTFSNELISRDEGLHCDFACLMFRHLVHKPSEERVVQLITNAVQIEQEFLTEALP 306
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN +LM QYI+FVADRLL+ +
Sbjct: 307 VNLIGMNCTLMKQYIEFVADRLLLEL 332
>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ailuropoda melanoleuca]
Length = 387
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/297 (61%), Positives = 226/297 (76%), Gaps = 11/297 (3%)
Query: 2 GSLKNET-ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
G L ++T ENE + D+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTA
Sbjct: 52 GRLSSDTNENEA---------KSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTA 102
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGF
Sbjct: 103 EEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGF 162
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAER 179
QI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER
Sbjct: 163 QILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKSTFGER 222
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 223 VVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKP 282
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 283 SEERVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 339
>gi|398391450|ref|XP_003849185.1| hypothetical protein MYCGRDRAFT_110972 [Zymoseptoria tritici
IPO323]
gi|339469061|gb|EGP84161.1| hypothetical protein MYCGRDRAFT_110972 [Zymoseptoria tritici
IPO323]
Length = 415
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/275 (65%), Positives = 222/275 (80%), Gaps = 3/275 (1%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLL 76
G+++ ED EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W +RL
Sbjct: 71 GKEDLED-EPILQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLN 129
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
D E+ FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+
Sbjct: 130 DDERFFISHVLAFFAASDGIVNENLIERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 189
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI + K++ LFNAI+NIPC+ +KA WAL WI +S FA RL+ FA +EGIFFSGSF
Sbjct: 190 DTYISEPKQRTYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAIEGIFFSGSF 249
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L + Q V ++ EAV IE
Sbjct: 250 ASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLNNKPSNQVVEDIITEAVVIE 309
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ +ALPCAL+GMN+ LM QYI+FVADRLL+ +
Sbjct: 310 QEFLTDALPCALLGMNAKLMCQYIEFVADRLLLAL 344
>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Anolis carolinensis]
Length = 390
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/277 (64%), Positives = 216/277 (77%), Gaps = 1/277 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
R+Q EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 60 RKQLPSNNAQDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES 119
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L EK+FISH+LAFFAASDGIV ENL RF +IQ+ EAR FYGFQIAMENIHSEMYSL
Sbjct: 120 LKPDEKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSL 179
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSG 193
L++TYIKD KE+ LFNAIE +PCV +KA WA+ WI ++ ER+V FA VEGIFFSG
Sbjct: 180 LIDTYIKDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSG 239
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV
Sbjct: 240 SFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVR 299
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 300 IEQEFLTEALPVNLIGMNCTLMKQYIEFVADRLILEL 336
>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Taeniopygia guttata]
Length = 390
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/273 (65%), Positives = 219/273 (80%), Gaps = 1/273 (0%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
E+ ++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L
Sbjct: 64 ERPGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPE 123
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++T
Sbjct: 124 EKYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 183
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCA 197
YIKDSKE+ LFNAIE +PCV +KA WA+ WI ++ ER+V FA VEGIFFSGSF +
Sbjct: 184 YIKDSKEREFLFNAIETLPCVKKKADWAMCWIGDKKATYGERVVAFAAVEGIFFSGSFAS 243
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +
Sbjct: 244 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIHKPSEERVKEIIMNAVLIEQE 303
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 304 FLTEALPVKLIGMNCTLMKQYIEFVADRLMLEL 336
>gi|367026740|ref|XP_003662654.1| hypothetical protein MYCTH_68292 [Myceliophthora thermophila ATCC
42464]
gi|347009923|gb|AEO57409.1| hypothetical protein MYCTH_68292 [Myceliophthora thermophila ATCC
42464]
Length = 414
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/273 (65%), Positives = 218/273 (79%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 74 KPEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 133
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YSLL++T
Sbjct: 134 EKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDT 193
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAIE IP + +KA WAL WI S FA+RLV FA VEGIFFSG+F +
Sbjct: 194 YIKEPAQRSHLFNAIETIPAIRKKADWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFAS 253
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q + ++ +AV IE +
Sbjct: 254 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPSKQVIEDIIVDAVRIEQE 313
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALPCAL+GMN++LM QYI+FVADRLL+ +
Sbjct: 314 FLTEALPCALLGMNANLMKQYIEFVADRLLLAL 346
>gi|401410906|ref|XP_003884901.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
Length = 392
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/280 (66%), Positives = 226/280 (80%)
Query: 17 QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL 76
Q +E+E +EP+L+ +R+ + PI++ +WEMYKK +ASFWTAEE+DL+QD+ HWE L
Sbjct: 65 QQMKEKESEEPLLIANPRRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWESLN 124
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+EKHFI +VLAFFAASDGIVLENLA +FL++IQIPEARAFYGFQIAMENIHSE YSLL+
Sbjct: 125 SNEKHFIKYVLAFFAASDGIVLENLAEKFLSEIQIPEARAFYGFQIAMENIHSETYSLLI 184
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFC 196
+ YI+D KEK LF+A+ N+ VA KA WA WI++ + FAERLVGFACVEGI FSGSFC
Sbjct: 185 DQYIRDEKEKMELFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFC 244
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
+IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ +L + V MV EAV +E
Sbjct: 245 SIFWLKKRGLMPGLTFSNELISRDEGLHADFACLLYSQLKNKLPDKVVQDMVREAVTVER 304
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+CEALP LIGMN+ M+QYI+FVADRLL + +F
Sbjct: 305 AFICEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF 344
>gi|355751100|gb|EHH55355.1| hypothetical protein EGM_04551, partial [Macaca fascicularis]
Length = 366
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 45 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 104
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 105 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 164
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 165 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 224
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL+++ L + ++V + AV IE +F+ EA
Sbjct: 225 KRGLMPGLTFSNELISRDEGLHCDFACLMFNHLVHKPLEERVRERIINAVRIEQEFLTEA 284
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 285 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 320
>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
Length = 418
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/282 (63%), Positives = 222/282 (78%), Gaps = 2/282 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+LME +RF MFPI+Y ++W+MYKKA+ASFWTAEE+DL +D+ W RL D+
Sbjct: 85 KEMEKEEPLLMENTRRFVMFPIKYHEIWKMYKKAEASFWTAEEIDLGKDMHDWNNRLNDN 144
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FIS +LAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 145 ERYFISRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDT 204
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIENIPC+ +KA WAL WI+ D+ F ERLV FA VEGIFFSGSF +
Sbjct: 205 YIKDPKEADFLFNAIENIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFAS 264
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGL+FSNELI RDEGLH DFACLL+S L+ R + V ++ EAV+IE +
Sbjct: 265 IFWLKKRGLMPGLSFSNELICRDEGLHTDFACLLFSHLQNRPDPEIVEKIITEAVDIEKE 324
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
F +ALP +L+GMN LM QY++FVADRLLV + ++ +A
Sbjct: 325 FFTDALPISLLGMNCKLMCQYVEFVADRLLVALGNKKIYNVA 366
>gi|375148687|ref|YP_005011128.1| ribonucleoside-diphosphate reductase [Niastella koreensis GR20-10]
gi|361062733|gb|AEW01725.1| Ribonucleoside-diphosphate reductase [Niastella koreensis GR20-10]
Length = 323
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 218/275 (79%), Gaps = 1/275 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
Q + E +L E RF + PI+Y +WEMYKK +ASFWTAEE+DLS D++ W L D E+H
Sbjct: 2 QTENEVLLQENKDRFVILPIKYPTIWEMYKKHEASFWTAEEIDLSGDLKDWASLNDGERH 61
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENLA F++++Q+PEAR FYGFQI MENIHSE Y+LL++TY+K
Sbjct: 62 FISHVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYVK 121
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D EK RLF+AI+ +P V +KA+WAL WI + FAERLV FA VEGIFFSGSFC+IFW+
Sbjct: 122 DVNEKDRLFHAIDTVPAVKKKAEWALRWIEQGN-FAERLVAFAAVEGIFFSGSFCSIFWM 180
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHC+FACLLYS+L +L ++V +++ +AV IE +F+ E
Sbjct: 181 KKRGLMPGLTFSNELISRDEGLHCEFACLLYSMLNAKLTQEQVFNIIGDAVRIEKEFITE 240
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
ALP LIGMN+ LM QYI+FVADR L + +F
Sbjct: 241 ALPVDLIGMNARLMQQYIEFVADRWLSELGYPKMF 275
>gi|453087864|gb|EMF15905.1| Ribonuc_red_sm-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 416
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 222/279 (79%), Gaps = 2/279 (0%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW- 72
+ E +++ E+ EP+L E QRF +FPI+Y ++W MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 EAETIKEDDEEVEPLLAENPQRFVLFPIKYHEIWNMYKKAEASFWTAEEIDLSKDLHDWN 125
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
+RL D E+ FISHVLAFFAASDGIV ENL RF ++ +PEAR FYGFQI MENIHSE Y
Sbjct: 126 KRLTDDERFFISHVLAFFAASDGIVNENLVERFSAEVTVPEARCFYGFQIMMENIHSETY 185
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFF 191
SLL++TYI + K++ LFNAI+NIPC+ +KA WAL WI S +FA RL+ FA VEGIFF
Sbjct: 186 SLLIDTYISEPKQRTYLFNAIDNIPCIRRKADWALRWISDKSSTFAMRLIAFAAVEGIFF 245
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
SGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+K+ V ++ EA
Sbjct: 246 SGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKKKPSKAVVQSIIVEA 305
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLL+ +
Sbjct: 306 VAIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLLAL 344
>gi|432100630|gb|ELK29158.1| Ribonucleoside-diphosphate reductase subunit M2, partial [Myotis
davidii]
Length = 331
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/275 (65%), Positives = 218/275 (79%), Gaps = 1/275 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FIS
Sbjct: 11 EEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEVLKSEERYFIS 70
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD K
Sbjct: 71 HVLAFFAASDGIVNENLVERFRQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 130
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLKK
Sbjct: 131 EREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK 190
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EAL
Sbjct: 191 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPAEQRVKEIITNAVRIEQEFLTEAL 250
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
P LIGMN +LM +YI+FVADRLL+ + +F +
Sbjct: 251 PVKLIGMNCTLMKRYIEFVADRLLLELGFSKVFRV 285
>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
Length = 405
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/286 (62%), Positives = 223/286 (77%), Gaps = 2/286 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
E E + + +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS
Sbjct: 54 EKPTEASTKIAAIKELEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLS 113
Query: 67 QDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
+D+ W RL D E++FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI +E
Sbjct: 114 KDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIE 173
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
NIHSE YSLL++TYIK+ K++ LF+AI+ IPC+ +KA+WA+ WI +S F +RLV FA
Sbjct: 174 NIHSETYSLLIDTYIKEPKQRAYLFDAIDTIPCINKKAQWAMRWISDKESSFGQRLVAFA 233
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + V
Sbjct: 234 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPDKKVV 293
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ EAV IE +F+ +ALP AL+GMNS LM QYI+FVADRLLV +
Sbjct: 294 EDIIVEAVAIEQEFLTDALPVALLGMNSKLMCQYIEFVADRLLVAL 339
>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Equus caballus]
Length = 351
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/293 (60%), Positives = 224/293 (76%), Gaps = 1/293 (0%)
Query: 5 KNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVD 64
+ E + ++ + + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVD
Sbjct: 11 RPEQDERLSSDTNENEAKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVD 70
Query: 65 LSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
LS+D+ HW +L EK+FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +
Sbjct: 71 LSKDLPHWNKLTSDEKYFISHVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILI 130
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V F
Sbjct: 131 ENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALQWIADRKSTFGERVVAF 190
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++
Sbjct: 191 AAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEER 250
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 251 VREIIVNAVEIEQEFLTEALPVDLIGMNCVLMKQYIEFVADRLLVELGFSKVF 303
>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Anolis carolinensis]
Length = 394
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/286 (62%), Positives = 221/286 (77%), Gaps = 4/286 (1%)
Query: 9 ENEVNQREQGEQ---EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
E+E + + G+Q EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDL
Sbjct: 55 ESEADALKGGKQLPSNNAQDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDL 114
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+QHWE L EK+FISH+LAFFAASDGIV ENL RF +IQ+ EAR FYGFQIAME
Sbjct: 115 SKDLQHWESLKPDEKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAME 174
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFA 184
NIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WA+ WI ++ ER+V FA
Sbjct: 175 NIHSEMYSLLIDTYIKDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFA 234
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 235 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERV 294
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 295 REIITNAVRIEQEFLTEALPVNLIGMNCTLMKQYIEFVADRLILEL 340
>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
oryzae RIB40]
gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|391873153|gb|EIT82227.1| ribonucleotide reductase, beta subunit [Aspergillus oryzae 3.042]
Length = 405
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/292 (62%), Positives = 223/292 (76%), Gaps = 2/292 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
E EV+ + +E E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS
Sbjct: 55 EKPTEVSSKIASIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLS 114
Query: 67 QDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
+D+ W RL D E+ FIS VLAFFAASDGIV ENL RF ++QIPEAR FYGFQI +E
Sbjct: 115 KDLHDWHNRLNDDERFFISRVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIE 174
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
NIH+E YSLL++TYIK+ K++ LF+AI+ IPC+ +KA WA+ WI +S F +RLV FA
Sbjct: 175 NIHAETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFGQRLVAFA 234
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q V
Sbjct: 235 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPDPQIV 294
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ EAV IE +F+ +ALPCAL+GMNS+LM QYI+FVADRLLV + F
Sbjct: 295 EDVIVEAVSIEKEFLTDALPCALLGMNSNLMCQYIEFVADRLLVALGNNKYF 346
>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
Length = 338
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 219/276 (79%), Gaps = 2/276 (0%)
Query: 17 QGEQEQEDQ-EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
GE+ + Q EP+L E +RF +FPI+Y +W MYKKA+ASFWT EEVDLS+D + WERL
Sbjct: 10 DGEKPFDPQAEPLLRENPRRFVIFPIQYSDMWSMYKKAEASFWTVEEVDLSKDTRDWERL 69
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D+E+HFI HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYS L
Sbjct: 70 NDNERHFIKHVLAFFAASDGIVNENLVERFAQEVQVVEARCFYGFQIAMENVHSEMYSTL 129
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGS 194
++TY++ S+EK RL NAIE +PCV +KA+WAL WI S + +F ERLV FA VEG+FFSGS
Sbjct: 130 IDTYVRSSEEKLRLLNAIETMPCVKEKAEWALRWIASKEATFGERLVAFAAVEGVFFSGS 189
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +R +V +V +AV I
Sbjct: 190 FAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVQRPSAARVREIVTDAVAI 249
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+ EALP L+G+N MSQYI+FVADRLLV +
Sbjct: 250 EQRFLTEALPVRLLGLNCETMSQYIEFVADRLLVDL 285
>gi|348566413|ref|XP_003468996.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cavia porcellus]
Length = 388
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/283 (63%), Positives = 221/283 (78%), Gaps = 2/283 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
+ +G ++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 59 KSKGFAPSVEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA 118
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSL
Sbjct: 119 LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 178
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSG 193
L++TYIKDS+E+ LFNAIE +PCV +K+ WAL WI + ++ ER+V FA VEGIFFSG
Sbjct: 179 LIDTYIKDSREREFLFNAIETMPCV-KKSDWALRWIGDKEATYGERVVAFAAVEGIFFSG 237
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L R Q+V ++ AV
Sbjct: 238 SFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLMHRPSEQRVKEIIVNAVR 297
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
IE +F+ EALP LIGMN LM QYI+FVADRL++ + +F
Sbjct: 298 IEQEFLTEALPVKLIGMNCELMKQYIEFVADRLMLELGFGKVF 340
>gi|442754007|gb|JAA69163.1| Putative ribonucleotide reductase beta subunit [Ixodes ricinus]
Length = 376
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/285 (62%), Positives = 225/285 (78%), Gaps = 2/285 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
+TE + ++ E E++D EP+L E +RF MFPI Y+ +W MYKKA+ASFWT EEVDL
Sbjct: 39 KTEKRLAKKTAVELEKQD-EPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLG 97
Query: 67 QDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMEN 126
+D+ HW+ L E+HFISH+LAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN
Sbjct: 98 KDLPHWDGLKPEERHFISHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIEN 157
Query: 127 IHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFAC 185
+HSEMYSLL++TYIKD E+ RLFNA+E +PC+ +KA WAL+WI + S +F ER+V FA
Sbjct: 158 VHSEMYSLLIDTYIKDPSERDRLFNAVETMPCIKRKADWALNWIGNRSATFGERIVAFAA 217
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACL++S L + ++V
Sbjct: 218 VEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLMFSHLXNKPSQERVR 277
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ +AV IE +F+ +ALP ALIGMN LM +YI+FVADRLLV +
Sbjct: 278 QIICDAVVIEQEFLTDALPVALIGMNCELMKRYIEFVADRLLVEL 322
>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 216/276 (78%), Gaps = 1/276 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
++ +E E +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L
Sbjct: 7 KRSRKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKL 66
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L
Sbjct: 67 DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
++TY+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSF
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSF 186
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEI 254
CAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV I
Sbjct: 187 CAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSI 246
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|397531941|gb|AFO54480.1| ribonucleotide reductase small subunit p53R2i [Carassius carassius]
Length = 337
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 217/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI+Y +W+MYK+AQASFWT EEVDLS+D+ HW+ L EKHFI
Sbjct: 16 EDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDSLKSEEKHFI 75
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QIPEAR+FYGFQI +EN+HSEMYS+L+ TYI+D
Sbjct: 76 SHVLAFFAASDGIVNENLVQRFSQEVQIPEARSFYGFQILIENVHSEMYSMLINTYIRDL 135
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAI +PCV +KA WAL WI ++S F ERLV FA VEGIFFSGSF AI+WLK
Sbjct: 136 KERDYLFNAIHTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYWLK 195
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLM GLT+SNELISRDEGLHC+FACLLYS L K+ +V ++ +AV IE +F+ EA
Sbjct: 196 KRGLMAGLTYSNELISRDEGLHCNFACLLYSYLVKKPSADRVKDIITKAVSIEQEFLTEA 255
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN SLM QYI+FVADRLL+ + +F
Sbjct: 256 LPVNLIGMNCSLMKQYIEFVADRLLMDLGLPKVF 289
>gi|426235770|ref|XP_004011853.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Ovis
aries]
Length = 351
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/276 (63%), Positives = 217/276 (78%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ D+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 28 ESDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKY 87
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 88 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 147
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 148 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 207
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F+
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLT 267
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 268 EALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVF 303
>gi|425772246|gb|EKV10657.1| Ribonucleotide reductase small subunit RnrA, putative [Penicillium
digitatum Pd1]
gi|425777425|gb|EKV15599.1| Ribonucleotide reductase small subunit RnrA, putative [Penicillium
digitatum PHI26]
Length = 402
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/273 (65%), Positives = 217/273 (79%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+E E EP+L E RF MFPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 65 KEMEASEPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDD 124
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 125 ERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 184
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + K++ LF+AI+ IPC+A+KA WAL WI +S FA RLV FA VEGIFFSGSF +
Sbjct: 185 YINEPKQRTYLFDAIDTIPCIAKKANWALRWISDHESTFASRLVAFAAVEGIFFSGSFAS 244
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S + R + V ++ EAV IE +
Sbjct: 245 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHMNHRPDPKLVQDIIVEAVGIEQE 304
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ +ALPC L+GMNS LM +YI+FVADRLLV +
Sbjct: 305 FLTDALPCGLLGMNSKLMCEYIEFVADRLLVAL 337
>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 323
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 219/272 (80%), Gaps = 2/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFIS 84
EPIL E RF +FPI + ++W+MYKKA+ASFWTAEE+DL+ D+ W+R L++ EK+FI
Sbjct: 5 EPILRENKDRFVLFPINHAEIWQMYKKAEASFWTAEEIDLTSDLLDWDRKLNNDEKYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F++++Q PEAR FYGFQI MENIHSE YSLL++TYIKD
Sbjct: 65 HILAFFAASDGIVNENLAVNFMSEVQYPEARCFYGFQIMMENIHSEAYSLLIDTYIKDPT 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+K+RLF A+E IPC++ KA WAL WI S SF+ERLV FA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 DKNRLFKALETIPCISNKADWALRWI-SQGSFSERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL+F+NELISRDEGLHCDFACLLYS L +L + + ++ AV IE +FV +ALP
Sbjct: 184 GLMPGLSFANELISRDEGLHCDFACLLYSQLNNKLPLETLQAIISHAVAIEKEFVQDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN++LM QYI+FVADRLLV + L+
Sbjct: 244 VRLIGMNATLMCQYIEFVADRLLVALGSPKLY 275
>gi|348513219|ref|XP_003444140.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Oreochromis niloticus]
Length = 349
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L E +RF +FPI+Y+ +W+MYK+AQASFWT EEVDLS+D+ HW+RL EKH
Sbjct: 26 ETEEEPLLRENPRRFVIFPIQYRDIWKMYKQAQASFWTVEEVDLSKDLAHWDRLKAEEKH 85
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF ++Q+PEAR+FY FQI +E +HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQVPEARSFYSFQILIETVHSEMYSMLINTYIR 145
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE+ LFNAI+ +PCV +KA WAL WI+ S S F ER+V FA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDYLFNAIQTMPCVKRKADWALQWINDSKSTFGERIVAFAAVEGIFFSGSFAAIYW 205
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLT+SNELISRDEGLHC+FACLLYS L K+ +V ++ +AV IE +F+
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFACLLYSYLVKKPSEDRVRDIITKAVSIEQEFLT 265
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAL LIG+NS LM QYI+FVADRLL + ++
Sbjct: 266 EALAVDLIGINSCLMKQYIEFVADRLLTDLGLTKVY 301
>gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Nomascus leucogenys]
Length = 434
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 217/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 113 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 172
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 173 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 232
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 233 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 292
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 293 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 352
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN LM QYI+FVADRL++ + +F +
Sbjct: 353 LPVKLIGMNCILMKQYIEFVADRLMLELGFGKVFRV 388
>gi|449017028|dbj|BAM80430.1| ribonucleoside-diphosphate reductase beta chain [Cyanidioschyzon
merolae strain 10D]
Length = 484
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/269 (66%), Positives = 213/269 (79%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E EP+LM RF +FPIRY + W YK+A ASFWT EEVDL QD++ W RL EKHF
Sbjct: 159 EKSEPLLMASTNRFVLFPIRYPETWSFYKRAVASFWTVEEVDLQQDLRDWSRLTSGEKHF 218
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I++VLAFFAASDGIV ENLA RF ++Q+ EAR+FY FQ+AMENIHSEMYSLL++T+IK+
Sbjct: 219 ITYVLAFFAASDGIVNENLALRFSTEVQLSEARSFYMFQMAMENIHSEMYSLLIDTFIKE 278
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+ EK RLF AI+ +PCV +KA+WAL W+ S SFAERL+ FA VEGIFFSGSFCAIFWLK
Sbjct: 279 TTEKDRLFRAIDTLPCVRRKAEWALRWVGSDASFAERLIAFAAVEGIFFSGSFCAIFWLK 338
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFAC ++ +LR + + ++ +AVE E FV EA
Sbjct: 339 KRGLMPGLTFSNELISRDEGLHCDFACHVFHMLRYKPPDVLIRAIICDAVEQERAFVREA 398
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIH 291
LP LIGMNS+LM QYI+F ADRLLV +H
Sbjct: 399 LPVNLIGMNSTLMQQYIEFCADRLLVALH 427
>gi|401886060|gb|EJT50123.1| ribonucleoside-diphosphate reductase [Trichosporon asahii var.
asahii CBS 2479]
gi|406697819|gb|EKD01069.1| ribonucleoside-diphosphate reductase [Trichosporon asahii var.
asahii CBS 8904]
Length = 420
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 226/289 (78%), Gaps = 3/289 (1%)
Query: 5 KNETENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
K + + V +R G+ E +E EP+L E RF +FPI+Y+++W+MYKKAQASFWTAEE+
Sbjct: 70 KPDYDAPVEKRYVGDLECEEADEPLLKESTDRFVLFPIKYREIWQMYKKAQASFWTAEEI 129
Query: 64 DLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
+L+ D+ W+ +L D+E++FI HVLAFFAASDGIV ENL RF ++QI EA+ FYGFQI
Sbjct: 130 NLAPDLHDWDNKLNDNERYFIEHVLAFFAASDGIVNENLVERFCGEVQISEAKTFYGFQI 189
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLV 181
MENIHSE YSLL++TYI+D+ + LF AIE IPC+ +KA WAL WI SF ERL+
Sbjct: 190 MMENIHSETYSLLIDTYIRDNARRQYLFQAIETIPCIKKKADWALRWISDQRSSFGERLI 249
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL++ LR+R H
Sbjct: 250 AFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHP 309
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ ++ EAV+IE +F+ EALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 310 DTINKIIKEAVKIEQEFLTEALPVSLIGMNAKLMCQYIEFVADRLLVAL 358
>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 219/272 (80%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
Q QE +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DLS D+ WE++ + E
Sbjct: 11 QSQEQEEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMNEGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K FI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIA+EN+HSE YS+LL+TY
Sbjct: 71 KFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
I D++EK R+ +AI IPC+ +KA WA+ WI SS SFAERLV FA VEGIFFSGSFCA+F
Sbjct: 131 ITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + + +L +++ ++ AV+IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPTERIREIICSAVDIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+C+++P L+GMN+ LMS YI+FVADRLLV +
Sbjct: 251 ICDSIPVRLLGMNADLMSTYIEFVADRLLVAL 282
>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
hutchinsonii ATCC 33406]
gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 324
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 215/267 (80%), Gaps = 2/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L E RF +FPI++ +W MYK+ +ASFWTAEE+DLSQD+ W L D E+HFIS
Sbjct: 5 EEPLLKENKNRFVLFPIKHDDIWAMYKQEEASFWTAEEIDLSQDLIDWANLNDGERHFIS 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA FL +QIPEA+ FYGFQI MENIHSE YSLL++TYIKD K
Sbjct: 65 HVLAFFAASDGIVNENLAVNFLEKVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLFNAI+ +PCV +KA WAL +I + SF E ++ FA VEGIFFSGSFC++FWLKKR
Sbjct: 125 EKDRLFNAIDTVPCVKKKADWALRFIDNG-SFIENIIAFAAVEGIFFSGSFCSVFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGL+FSNELISRDEGLHCDFACLLY+ + +L ++V ++ EAVEIE +FV ++L
Sbjct: 184 GLMPGLSFSNELISRDEGLHCDFACLLYTKYINNKLPAERVIQIILEAVEIEKEFVTDSL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN+ LM QYI+FVADRLLV +
Sbjct: 244 PVDLIGMNARLMQQYIEFVADRLLVAL 270
>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
Length = 390
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 219/274 (79%), Gaps = 1/274 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E+ ++EP+L E +RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L
Sbjct: 63 AERPGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKP 122
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
EK+FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++
Sbjct: 123 EEKYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLID 182
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFC 196
TYIKDS+E+ LFNAIE +PCV +KA WA+ WI ++ ER+V FA VEGIFFSGSF
Sbjct: 183 TYIKDSQEREFLFNAIETLPCVKKKADWAMCWIGDKKATYGERVVAFAAVEGIFFSGSFA 242
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE
Sbjct: 243 SIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIHKPSEERVREIIMNAVLIEQ 302
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 303 EFLTEALPVKLIGMNCTLMKQYIEFVADRLMLEL 336
>gi|407839735|gb|EKG00364.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 219/272 (80%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
Q QE +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DLS D+ WE++ + E
Sbjct: 11 QSQEQEEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMNEGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K FI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIA+EN+HSE YS+LL+TY
Sbjct: 71 KFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
I D++EK R+ +AI IPC+ +KA WA+ WI SS SFAERLV FA VEGIFFSGSFCA+F
Sbjct: 131 ITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + + +L +++ ++ AV+IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPTERIREIICSAVDIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+C+++P L+GMN+ LMS YI+FVADRLLV +
Sbjct: 251 ICDSIPVRLLGMNADLMSTYIEFVADRLLVAL 282
>gi|407916476|gb|EKG09844.1| Ribonucleotide reductase [Macrophomina phaseolina MS6]
Length = 407
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 223/273 (81%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+++E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 68 KKEEAHEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 127
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 128 ERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDT 187
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCA 197
YI + ++++ LFNAI+NIPC+ +KA WAL WI + +FA RL+ FA VEGIFFSGSF +
Sbjct: 188 YISEPRQRNYLFNAIDNIPCIKKKADWALRWICDKNSTFASRLIAFAAVEGIFFSGSFAS 247
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S ++ + + V ++ EAVEIE +
Sbjct: 248 IFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHIKSKPSPESVEKIITEAVEIEKE 307
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ +ALP AL+GMN++LM QYI+FVADRLLV +
Sbjct: 308 FLTDALPVALLGMNATLMCQYIEFVADRLLVAL 340
>gi|403418122|emb|CCM04822.1| predicted protein [Fibroporia radiculosa]
Length = 385
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/293 (63%), Positives = 226/293 (77%), Gaps = 10/293 (3%)
Query: 6 NETENEVNQREQGEQEQ--------EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASF 57
+E ++V++++ G+ + E EP+L E +RF +FPI+Y +W+MYKKA+ASF
Sbjct: 26 SEHHSDVDKKDVGKPPRFIGEVDLPEYLEPLLTESKRRFVLFPIQYHDIWQMYKKAEASF 85
Query: 58 WTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
WTAEE+DLS D+ W +RL D EK+FISHVLAFFAASDGIV ENL RF N++Q+ EAR
Sbjct: 86 WTAEEIDLSHDLWDWKDRLNDDEKYFISHVLAFFAASDGIVNENLVDRFSNEVQVAEARC 145
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDS 175
FYGFQI +ENIHSE YSLLL+TYIKD K++ LF+AIE IPC+ +KA WAL WI S
Sbjct: 146 FYGFQIMIENIHSETYSLLLDTYIKDQKQRAHLFDAIETIPCIKKKADWALRWIADKQSS 205
Query: 176 FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235
FAERLV FA VEGIFFSGSF +IFWLKKRGLMPGLT+SNELI RDEG+H DFACLLY L
Sbjct: 206 FAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTYSNELIIRDEGMHTDFACLLYHHL 265
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
R+RLH + ++ EAV IE +F+ EALPCALIGMN LM QYI+FVADRLL
Sbjct: 266 RRRLHPSVILAIITEAVIIEQEFLTEALPCALIGMNVRLMCQYIEFVADRLLT 318
>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 3 [Anolis carolinensis]
Length = 391
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/283 (62%), Positives = 219/283 (77%), Gaps = 1/283 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E+E + + + EP+L + RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D
Sbjct: 55 ESEAVKVALPQSPRRTDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKD 114
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+QHWE L EK+FISH+LAFFAASDGIV ENL RF +IQ+ EAR FYGFQIAMENIH
Sbjct: 115 LQHWESLKPDEKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIH 174
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVE 187
SEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WA+ WI ++ ER+V FA VE
Sbjct: 175 SEMYSLLIDTYIKDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVE 234
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V +
Sbjct: 235 GIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREI 294
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 295 ITNAVRIEQEFLTEALPVNLIGMNCTLMKQYIEFVADRLILEL 337
>gi|3914640|sp|O15910.1|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/272 (64%), Positives = 214/272 (78%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L D E
Sbjct: 11 KEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L++TY
Sbjct: 71 RHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSFCAIF
Sbjct: 131 VVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 251 ICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|449139107|gb|AGE89912.1| RR2B [Spodoptera littoralis NPV]
Length = 334
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/266 (63%), Positives = 217/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF MFPI Y +W MYKKA+ASFWT EEVDLS+D++ W+ L +SE+ FI H
Sbjct: 11 EPLLRENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDMKDWDSLKESERDFIKH 70
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+AMEN+HSEMYSLL++TY++D E
Sbjct: 71 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAMENVHSEMYSLLIDTYVRDIDE 130
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K RLFNAIE +P +A+KA+W++ WI S + +FAER++ FA VEGIFFSGSF AIFW+KKR
Sbjct: 131 KQRLFNAIETMPTIAKKAQWSIKWIKSDTATFAERIIAFAAVEGIFFSGSFAAIFWMKKR 190
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GL+PGLTFSNELISRDEGLH DFACL+YS + + ++V ++ +AV IE +F+ EALP
Sbjct: 191 GLLPGLTFSNELISRDEGLHTDFACLMYSHIVNKPTRERVLDIITDAVSIEKEFLTEALP 250
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
A++GMN+ LMSQYI+FVADRLL+ +
Sbjct: 251 VAMLGMNNDLMSQYIEFVADRLLLEL 276
>gi|346322004|gb|EGX91603.1| ribonucleoside-diphosphate reductase M2 subunit [Cordyceps
militaris CM01]
Length = 413
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/289 (62%), Positives = 224/289 (77%), Gaps = 8/289 (2%)
Query: 4 LKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
+K++T V + EQ + EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+
Sbjct: 64 VKDDTTVAVTKPEQMD------EPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEI 117
Query: 64 DLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
DLS+D+ W RL E++FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI
Sbjct: 118 DLSKDLHDWNNRLNADEQYFISHILAFFAASDGIVNENLIERFSGEVQIPEARCFYGFQI 177
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLV 181
MENIHSE YSLL++TYIK+ ++ LFNAIE IPC+ +KA WAL WI S FA+RLV
Sbjct: 178 MMENIHSETYSLLIDTYIKEQAQRTYLFNAIETIPCIRKKADWALHWISDKQSTFAQRLV 237
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA +EGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R
Sbjct: 238 AFAAIEGIFFSGAFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLNNRASK 297
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ + ++ +AV IE +F+ EALPCAL+GMN++LM QYI+FVADRLL +
Sbjct: 298 EIIKTIITDAVAIEKEFLTEALPCALLGMNATLMQQYIEFVADRLLAAL 346
>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 216/276 (78%), Gaps = 1/276 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
++ +E E +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L
Sbjct: 7 KRSRKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKL 66
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L
Sbjct: 67 DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
++TY+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSF
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSF 186
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEI 254
CAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV I
Sbjct: 187 CAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVLI 246
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|397531943|gb|AFO54481.1| ribonucleotide reductase small subunit p53R2ii [Carassius
carassius]
Length = 349
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 214/268 (79%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI+Y +W+MYK+AQASFWT EEVDLS+D+ HW+ L EKHFI
Sbjct: 28 EDEPLLKENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDSLKSEEKHFI 87
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QIPEAR+FYGFQI +EN+HSEMYS+L+ TYI+D
Sbjct: 88 SHVLAFFAASDGIVNENLVQRFSQEVQIPEARSFYGFQILIENVHSEMYSMLINTYIRDL 147
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAI +P V +KA WAL WI ++S F ERLV FA VEGIFFSGSF AI+WLK
Sbjct: 148 KERDFLFNAIHTMPFVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYWLK 207
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLT+SNELISRDEGLHC+FACL+YS L K+ +V ++ +AV IE +F+ EA
Sbjct: 208 KRGLMPGLTYSNELISRDEGLHCNFACLMYSYLVKKPSADRVKDIITKAVSIEQEFLTEA 267
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN SLM QYI+FVADRLL +
Sbjct: 268 LPVNLIGMNCSLMKQYIEFVADRLLTDL 295
>gi|345110753|pdb|3OLJ|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110754|pdb|3OLJ|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110755|pdb|3OLJ|C Chain C, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110756|pdb|3OLJ|D Chain D, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
Length = 286
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 217/274 (79%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 4 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 64 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 124 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 183
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 184 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 244 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVF 277
>gi|384489720|gb|EIE80942.1| ribonucleoside-diphosphate reductase small chain [Rhizopus delemar
RA 99-880]
Length = 344
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 227/289 (78%), Gaps = 14/289 (4%)
Query: 3 SLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEE 62
SLKN+ ++E QE IL E +RFC+FPI+Y ++W+ YKKA+ASFWTAEE
Sbjct: 14 SLKNKVDDE-------------QEEILRENTRRFCLFPIKYHEIWQFYKKAEASFWTAEE 60
Query: 63 VDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
+DLS+D WE ++ ++E+ FIS VLAFFA+SDGIV ENL F ++++IPEA+ FYGFQ
Sbjct: 61 IDLSRDQNDWENKMTENERFFISRVLAFFASSDGIVNENLVQNFCDEVKIPEAKCFYGFQ 120
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLV 181
I +ENIHSE YSLL++TYIKD +EK LF+AI+ IPC+ +KA WA WI ++DSFAERLV
Sbjct: 121 IMIENIHSETYSLLIDTYIKDDEEKEMLFSAIDTIPCIKRKADWAFKWISANDSFAERLV 180
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ +RK+
Sbjct: 181 AFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFTHIRKQPSQ 240
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
Q+V ++ EAV IE +F+ +ALP ALIGMNS+LM QYI+FVADRL+V +
Sbjct: 241 QRVKDIIMEAVGIEQEFLTDALPVALIGMNSTLMCQYIEFVADRLMVAL 289
>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
Length = 493
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/266 (65%), Positives = 216/266 (81%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
E +L E RF +FPI+Y +WE YK+ ASFWT EEVD + D+ W RL E+ FI
Sbjct: 166 DEDLLRENPNRFTLFPIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIK 225
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
+VLAFFAASDGIV+ENLAARF++DIQ+PEARAFYGFQIAMEN+HSEMYS+LL+ Y+++ +
Sbjct: 226 YVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPE 285
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+++LF+AI IP VA+KA+WA+ WI SS+ FAERLVGFACVEGI FSGSFC+IFWLKKR
Sbjct: 286 ERNQLFDAIHTIPTVAKKAEWAMRWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKR 345
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGL+FSN LISRDEGLHCDFAC LYS L+ RL ++V +V EAV++E +F EAL
Sbjct: 346 CLMPGLSFSNVLISRDEGLHCDFACCLYSHLKNRLSRERVLQIVDEAVQLEDEFCTEALS 405
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
C L+GMN+ LM QYI+FVADRLLV +
Sbjct: 406 CELLGMNADLMRQYIRFVADRLLVSL 431
>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Sus scrofa]
Length = 351
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/292 (60%), Positives = 221/292 (75%), Gaps = 1/292 (0%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+E E ++ + + +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDL
Sbjct: 12 SEQEERLSSDTSENEAKSSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDL 71
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW RL EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +E
Sbjct: 72 SKDLPHWNRLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIE 131
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFA 184
N+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI +F ER+V FA
Sbjct: 132 NVHSEMYSLLIDTYIRDPKQREFLFNAIETMPYVKKKADWALRWIADRKATFGERVVAFA 191
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + +V
Sbjct: 192 AVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEARV 251
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 252 REIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVF 303
>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Meleagris gallopavo]
Length = 353
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/273 (65%), Positives = 218/273 (79%), Gaps = 1/273 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L + +RF +FPI++ +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FIS
Sbjct: 33 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 92
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENL ARF ++QIPEAR FYGFQI +EN+HSEMYSLL++TYIKD +
Sbjct: 93 HILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 152
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
++ LFNAIE +PCV +KA WAL WI S F ER+V FA VEGIFFSGSF AIFWLKK
Sbjct: 153 KRDFLFNAIETMPCVKKKADWALKWIEDRHSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL++ L R ++V ++ AVEIE +F+ EAL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 272
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
P LIGMN +LM QYI+FVADRLL+ + +F
Sbjct: 273 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF 305
>gi|395512223|ref|XP_003760342.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Sarcophilus harrisii]
Length = 351
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/276 (64%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 28 KPSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKY 87
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI +ENIHSEMYSLL++TYIK
Sbjct: 88 FISHILAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQILIENIHSEMYSLLIDTYIK 147
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D +++ LFNAIE +PCV +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 148 DPQKREFLFNAIETMPCVKRKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 207
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AVEIE +F+
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNKPSEERVKEIIIHAVEIEQEFLT 267
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ALP LIG+N +LM QYI+FVADRLLV + +F
Sbjct: 268 DALPVGLIGINCTLMKQYIEFVADRLLVELGFSKIF 303
>gi|449017273|dbj|BAM80675.1| ribonucleoside-diphosphate reductase beta chain [Cyanidioschyzon
merolae strain 10D]
Length = 383
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/284 (62%), Positives = 225/284 (79%), Gaps = 5/284 (1%)
Query: 12 VNQREQGEQEQEDQEPILM--EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDV 69
++ E+G+ P + E+ R+ +FPI++ +++E YK+ ASFWTAEE+DL+ D+
Sbjct: 46 LDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADM 105
Query: 70 QHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
HW RL ++E++F+SHVLAFFAASDGIVLENLA RF+ D++IPEAR FYGFQIAMENIH
Sbjct: 106 DHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIH 165
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SE YSLL++ Y+KD +E+ LF A+E +PCV +KA WA+ WI S SF ERLV FA VEG
Sbjct: 166 SETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEG 225
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL--RKRLHWQKVHH 246
IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC LYS+L +R+ +++H
Sbjct: 226 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHS 285
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
M+ +AVE E +FVC+ALP +LIGMN LMS YI+FVADRLLV +
Sbjct: 286 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVEL 329
>gi|75076588|sp|Q4R741.1|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
gi|355698140|gb|EHH28688.1| Ribonucleoside-diphosphate reductase subunit M2 B [Macaca mulatta]
gi|355779870|gb|EHH64346.1| Ribonucleoside-diphosphate reductase subunit M2 B [Macaca
fascicularis]
gi|380788457|gb|AFE66104.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Macaca
mulatta]
gi|383418729|gb|AFH32578.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Macaca
mulatta]
Length = 351
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 28 KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKY 87
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 88 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 147
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 148 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 207
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLT 267
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 268 EALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIF 303
>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
Length = 393
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/266 (64%), Positives = 216/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D+E+HFISH
Sbjct: 74 EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +E
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPQE 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNA+E +P V +KA WAL WI S + +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 RDYLFNAVETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA +++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVMMFRHLVQRPSRERIIEIISDAVTIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN +LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCALMSQYIEFVADRLLVEL 339
>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit R2
Length = 332
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/274 (64%), Positives = 216/274 (78%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 11 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 70
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 71 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 130
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 131 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 190
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG MPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 191 KRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 250
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 251 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVF 284
>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
Length = 355
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 216/266 (81%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI + +WE YKKA+ASFWTAEE+DL QD++ W L D E+HFISH
Sbjct: 34 EPILQENKNRFVLFPIEHHDIWEFYKKAEASFWTAEEIDLGQDLKDWANLNDGERHFISH 93
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIA+ENIHSE YSLL++TYIKD +E
Sbjct: 94 VLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAVENIHSETYSLLIDTYIKDPQE 153
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ +LFNAI+ + CV +KA WAL WI + SFAERLV FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 154 RDKLFNAIDTLDCVKKKADWALRWIEQA-SFAERLVAFAAVEGIFFSGSFCSIFWLKKRG 212
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGL+FSNELISRDEGLHCDFACLLY+ L+ +L ++V ++ +AV IE +FV +ALP
Sbjct: 213 LMPGLSFSNELISRDEGLHCDFACLLYANHLQNKLPEERVREIITDAVAIEKEFVTDALP 272
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN+ LMSQYI+FVADRLL+ +
Sbjct: 273 VKLIGMNADLMSQYIEFVADRLLLEL 298
>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
mansoni]
gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
[Schistosoma mansoni]
Length = 365
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/266 (68%), Positives = 212/266 (79%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L RF +FPI Y VW YKKA ASFWT EEVDLS+D HWE L E+HFIS+
Sbjct: 43 EPLLKPNPHRFVLFPIEYHDVWHFYKKAVASFWTVEEVDLSKDFIHWESLKVGERHFISY 102
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIVLENL RF ++QIPE R FYG QIA+ENIHSEMYSLL++TYIKDSKE
Sbjct: 103 VLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKE 162
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAI N+ CVA+KA+WALDWI S S FAERLV FA VEG+FFSGSF AIFWLKKR
Sbjct: 163 RDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAERLVAFAAVEGVFFSGSFAAIFWLKKR 222
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL+FSNELISRDEGLHCDFACLL+ + K+ ++V ++ EAV IE +F+ EALP
Sbjct: 223 GLMPGLSFSNELISRDEGLHCDFACLLFKHIIKKPPKERVESIIREAVLIEQEFLSEALP 282
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+LIGMN LM QYI+F+ADRLLV +
Sbjct: 283 VSLIGMNCKLMCQYIEFIADRLLVEL 308
>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
gi|75041724|sp|Q5R9G0.1|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
Length = 351
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 303
>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 219/272 (80%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
Q QE +EP+L E R+ +FPI+Y +W+ YK++++S WT EE+DLS D+ WE++ + E
Sbjct: 11 QLQEQEEPLLRENPDRYVIFPIKYHDIWKKYKESESSIWTVEEIDLSSDLADWEKMNEGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K FI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIA+EN+HSE YS+LL+TY
Sbjct: 71 KFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
I D++EK R+ +AI IPC+ +KA WA+ WI SS SFAERLV FA VEGIFFSGSFCA+F
Sbjct: 131 ITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + + +L +++ ++ AV+IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPKERIREIICSAVDIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+C+A+P L+GMN+ LMS YI+FVADRLLV +
Sbjct: 251 ICDAIPVRLLGMNADLMSTYIEFVADRLLVAL 282
>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
sapiens]
gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Pan troglodytes]
gi|74727333|sp|Q7LG56.1|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
sapiens]
gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
sapiens]
gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
construct]
gi|410253810|gb|JAA14872.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410292306|gb|JAA24753.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410350059|gb|JAA41633.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410350061|gb|JAA41634.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
Length = 351
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 303
>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
Length = 391
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 217/272 (79%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ WE+L EKHFISH
Sbjct: 72 EPLLKDNPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLGDWEKLKSGEKHFISH 131
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYSLL++TYI+D KE
Sbjct: 132 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 191
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WA++WI S + F ER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 192 REYLFNAIETLPCVKKKADWAMNWISSKHANFGERVVAFAAVEGIFFSGSFASIFWLKKR 251
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACL++ L ++ ++V ++ EAV IE +F+ +ALP
Sbjct: 252 GLMPGLTFSNELISRDEGLHTDFACLMFRYLVQKPSKERVLEIIREAVVIEQEFLTKALP 311
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
L+GMN LMSQYI+FVADRLL+ + ++
Sbjct: 312 VDLLGMNCELMSQYIEFVADRLLLELGNEKIY 343
>gi|403299934|ref|XP_003940726.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Saimiri boliviensis boliviensis]
Length = 351
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 225/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKFF 303
>gi|402878875|ref|XP_003903089.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Papio anubis]
Length = 351
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 28 KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKY 87
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 88 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 147
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 148 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 207
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLT 267
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 268 EALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIF 303
>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
Length = 398
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 224/285 (78%), Gaps = 3/285 (1%)
Query: 9 ENEVNQREQGEQEQEDQ--EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
+NE++ + EQ D EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS
Sbjct: 60 KNEMSAAHKREQTPFDPSIEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLS 119
Query: 67 QDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMEN 126
+D+ WE+L EKHFISHVLAFFAASDGIV NL RF ++Q+ EAR FYGFQIAMEN
Sbjct: 120 KDLADWEKLKSGEKHFISHVLAFFAASDGIVNVNLVERFSQEVQVTEARCFYGFQIAMEN 179
Query: 127 IHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFAC 185
+HSEMYSLL++TYI+DSKE+ LFNAI+N+PCV +KA WAL+WI S + F ER+V FA
Sbjct: 180 VHSEMYSLLIDTYIRDSKEREYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAA 239
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
VEGIFFSG+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACL++ L ++ ++V
Sbjct: 240 VEGIFFSGTFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVI 299
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ EAV IE +F+ +ALP L+GMN LMSQYI+F ADRLL+ +
Sbjct: 300 EIIREAVLIEQEFLTKALPVDLLGMNCELMSQYIEFEADRLLLEL 344
>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
Length = 391
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/263 (66%), Positives = 214/263 (81%), Gaps = 1/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D W RL D+E++FISH
Sbjct: 72 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDATDWARLTDNERYFISH 131
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI++ +E
Sbjct: 132 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIREPQE 191
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WA+ WI S S +FAER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 192 RDYLFNAIETMPAVKRKADWAMSWISSKSANFAERIIAFAAVEGIFFSGSFASIFWLKKR 251
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L+Y L +R +++ ++ +AVEIE +F+ EALP
Sbjct: 252 GLMPGLTFSNELISRDEGLHCDFAVLMYHHLVQRPKRERIIEIIRDAVEIEQEFLTEALP 311
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
LIGMN LMSQYI+FVADRLL
Sbjct: 312 VNLIGMNCVLMSQYIEFVADRLL 334
>gi|382546360|ref|NP_001244266.1| ribonucleoside diphosphate reductase small subunit [Bombyx mori]
gi|380503816|dbj|BAL72672.1| ribonucleoside diphosphate reductase small subunit [Bombyx mori]
Length = 375
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/286 (63%), Positives = 225/286 (78%), Gaps = 2/286 (0%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
N TE E++ + E+ +EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDL
Sbjct: 37 NLTE-EMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDL 95
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ WE L DSE+HFI HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAME
Sbjct: 96 SKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAME 155
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFA 184
N+HSEMYSLL++TYI+D KE+ LFNA+E +PCV +KA WAL WI S + +F ER+V FA
Sbjct: 156 NVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERIVAFA 215
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACL++ L ++ + V
Sbjct: 216 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLMFQHLVQKPTKECV 275
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
H++ +AV IE +F+ +ALP L+GMN LMSQYI+FVADRLLV +
Sbjct: 276 LHIIKDAVVIEQEFLTDALPVRLLGMNCELMSQYIEFVADRLLVDL 321
>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
tropicalis]
gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
Length = 346
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/269 (65%), Positives = 215/269 (79%), Gaps = 1/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+++EP L + QRF +FPI Y +W+MYKKAQASFWTAEEVDLS+D+ HWE+L E++F
Sbjct: 24 DEEEPFLRKNPQRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDLVHWEKLKPEERNF 83
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL+ETYIKD
Sbjct: 84 ISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIETYIKD 143
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWL 201
+ + LFNAIE +PCV +KA+WAL WI SF ER+V FA VEGIFFSGSF AIFWL
Sbjct: 144 PRRREFLFNAIETMPCVRKKAQWALRWISDRKASFGERVVAFAAVEGIFFSGSFAAIFWL 203
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLH DFACL++ L K+ ++V ++ AV IE +F+ E
Sbjct: 204 KKRGLMPGLTFSNELISRDEGLHTDFACLMFHYLVKKPTEERVTEIIVNAVRIEQEFLTE 263
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALP +LIGMN +LM YI+FVADRLLV +
Sbjct: 264 ALPVSLIGMNCTLMKTYIEFVADRLLVEL 292
>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
Length = 326
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/293 (61%), Positives = 224/293 (76%), Gaps = 4/293 (1%)
Query: 8 TENEVNQREQGEQEQE---DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVD 64
TEN Q E E ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVD
Sbjct: 15 TENLYFQSMSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVD 74
Query: 65 LSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
LS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +
Sbjct: 75 LSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILI 134
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V F
Sbjct: 135 ENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAF 194
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++
Sbjct: 195 AAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEER 254
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 255 VREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 307
>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
Length = 417
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/279 (63%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+LME +RF +FPI+Y +VW+MYKKA+ASFWTAEE+DLS+D+ W RL D+E+
Sbjct: 88 EKDEPLLMENTRRFVLFPIKYNEVWQMYKKAEASFWTAEEIDLSKDITDWNNRLNDNERF 147
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS +LAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL+++YIK
Sbjct: 148 FISRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIK 207
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAI+NIPC+ +KA WAL WI D+ F ERLV FA VEGIFFSGSF +IFW
Sbjct: 208 DPKEADFLFNAIDNIPCIRKKADWALRWISDDDALFGERLVAFAAVEGIFFSGSFASIFW 267
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKK+GLMPGLTFSNELI RDEGLH DFACLL+S L+ R + V ++ EAV+IE +F
Sbjct: 268 LKKKGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPDAEIVEKIITEAVKIEKEFFT 327
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN+ LM QY++FVADRLLV + ++ +
Sbjct: 328 DALPSSLLGMNAELMCQYVEFVADRLLVALGNKKVYNVT 366
>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
isoform 1 [Callithrix jacchus]
Length = 351
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 225/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSADTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKFF 303
>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
Length = 376
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/285 (62%), Positives = 224/285 (78%), Gaps = 2/285 (0%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
+TE + ++ E E++D EP+L E +RF MFPI Y+ +W MYKKA+ASFWT EEVDL
Sbjct: 39 KTEKRLAKKTVVELEKQD-EPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLG 97
Query: 67 QDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMEN 126
+D+ HW+ L E+HFISH+LAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN
Sbjct: 98 KDLPHWDGLKPEERHFISHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIEN 157
Query: 127 IHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFAC 185
+HSEMYSLL++TYIKD E+ RLFNA+E +PC+ +KA WAL+WI + S +F ER+V FA
Sbjct: 158 VHSEMYSLLIDTYIKDPSERDRLFNAVETMPCIKRKADWALNWISNRSATFGERIVAFAA 217
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACL++S L + +V
Sbjct: 218 VEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLMFSHLVNKPSQARVR 277
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ +AV IE +F+ +ALP ALIGMN LM +YI+FVADRLLV +
Sbjct: 278 QIICDAVVIEQEFLTDALPVALIGMNCELMKRYIEFVADRLLVEL 322
>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
Sal-1]
gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
[Plasmodium vivax]
Length = 349
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 216/269 (80%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++ +E E IL ++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D++ +E+L D+
Sbjct: 24 QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDN 83
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFI HVLAFFAASDGIVLENLA++FL ++I EA+ FY FQIA+ENIHSE YSLL++
Sbjct: 84 EKHFIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDN 143
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAI
Sbjct: 144 YIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAI 203
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L + V ++V EAVE+E F
Sbjct: 204 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSF 263
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 264 ICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>gi|378726205|gb|EHY52664.1| ribonucleoside-diphosphate reductase small chain [Exophiala
dermatitidis NIH/UT8656]
Length = 417
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/294 (62%), Positives = 226/294 (76%), Gaps = 10/294 (3%)
Query: 4 LKNETENEVNQREQGEQ------EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASF 57
++ T +EVN +G + E E EPIL E RF +FPI+Y ++W MYKKA+ASF
Sbjct: 54 VEKPTVSEVNAPAEGPKVAPTIKELEADEPILQENPHRFVLFPIKYHEIWNMYKKAEASF 113
Query: 58 WTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
WTAEEVDLS+D+ W RL D E++FISHVLAFFAASDGIV ENL RF ++QIPEAR
Sbjct: 114 WTAEEVDLSKDLHDWHNRLNDDERYFISHVLAFFAASDGIVNENLLERFSGEVQIPEARC 173
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI--HSSD 174
FYGFQI +ENIHSEMYSLL++TYIKD+K+K LF+AI+ IPC+ +KA WAL WI H S
Sbjct: 174 FYGFQIMIENIHSEMYSLLIDTYIKDNKQKTYLFDAIDTIPCIRKKADWALKWICDHES- 232
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
+FA+RLV FA VEGIFFSGSF +IFWLK +GLMPGLTFSNELISRDEG+H DFACLL
Sbjct: 233 TFAQRLVAFAAVEGIFFSGSFASIFWLKSKGLMPGLTFSNELISRDEGMHTDFACLLIQH 292
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
L+ + + + ++ EAV IE +F+ EALP AL+GMN+ LM QYI+FVADRLLV
Sbjct: 293 LKHKPDPKLIEDIITEAVAIEKEFLTEALPVALLGMNAKLMQQYIEFVADRLLV 346
>gi|380024292|ref|XP_003695935.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2-like [Apis florea]
Length = 383
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/295 (63%), Positives = 230/295 (77%), Gaps = 8/295 (2%)
Query: 3 SLKNETENEVNQRE-QGEQEQEDQ-----EPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
S N ++N VN + Q +E++ EP+L E +RF +FPI++ +W+MYKKA+AS
Sbjct: 36 SQDNSSKNVVNAKAIQNMYLKENKFNPELEPLLKENPRRFVVFPIQWPDIWQMYKKAEAS 95
Query: 57 FWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
FWT EEVDLS+DV W L SEKHFISHVLAFFAASDGIV ENL RF ++QI EAR
Sbjct: 96 FWTVEEVDLSKDVFDWNNLTASEKHFISHVLAFFAASDGIVNENLVERFSQEVQITEARC 155
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDS 175
FYGFQ+AMEN+HSEMYSLL++TYI D+KE LFNAIEN+PCVA+KA WAL+WI H S +
Sbjct: 156 FYGFQVAMENVHSEMYSLLIDTYIADAKEDF-LFNAIENLPCVAKKAHWALNWINHESAT 214
Query: 176 FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235
F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ +
Sbjct: 215 FPERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHI 274
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ ++V ++ +AV+IE +F+ +ALP +IGMN LM QYI+FVADRLLV +
Sbjct: 275 VQKPSCERVTSIIKDAVKIEQEFLTDALPVEMIGMNCKLMCQYIEFVADRLLVEL 329
>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/276 (63%), Positives = 215/276 (77%), Gaps = 1/276 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
++ +E E +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L
Sbjct: 7 KRSRKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKL 66
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIH E YS+L
Sbjct: 67 DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHCETYSVL 126
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
++TY+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSF
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSF 186
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEI 254
CAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV I
Sbjct: 187 CAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSI 246
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
Length = 323
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 214/265 (80%), Gaps = 3/265 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHFI 83
EPIL RF +FPI++ +W+ YKKA+ASFWTAEEVDLS D+ W+ L+ E++FI
Sbjct: 2 NEPILQNNKNRFVIFPIQHDDIWQFYKKAEASFWTAEEVDLSSDMNDWQNKLNKDERYFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENLA F+ ++Q PEAR FYGFQI +ENIHSEMYSLL++TYIKD
Sbjct: 62 SHVLAFFAASDGIVNENLAVNFVQEVQYPEARFFYGFQIMIENIHSEMYSLLIDTYIKDP 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KEK L AIE IPCV +KA WAL+WI SD+FAERL+ FA VEGIFFSGSFC+IFWLKK
Sbjct: 122 KEKDHLLRAIETIPCVGKKADWALEWIE-SDNFAERLIAFAAVEGIFFSGSFCSIFWLKK 180
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLHCDFACLLY + L+ +L + V ++ +AVE+E +FV EA
Sbjct: 181 RGLMPGLTFSNELISRDEGLHCDFACLLYVNHLKNKLPEETVQKIIADAVEVEKEFVTEA 240
Query: 263 LPCALIGMNSSLMSQYIKFVADRLL 287
LP LIGMN+ LM QYI+FVADRLL
Sbjct: 241 LPVRLIGMNAELMCQYIEFVADRLL 265
>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
Length = 311
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 216/269 (80%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++ +E E IL ++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D++ +E+L D+
Sbjct: 23 QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDN 82
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFI HVLAFFAASDGIVLENLA++FL ++I EA+ FY FQIA+ENIHSE YSLL++
Sbjct: 83 EKHFIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDN 142
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAI
Sbjct: 143 YIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAI 202
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L + V ++V EAVE+E F
Sbjct: 203 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSF 262
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 263 ICESLPCDLIGMNSRLMSQYIEFVADRLL 291
>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/282 (62%), Positives = 220/282 (78%), Gaps = 2/282 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ QE EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W+ R+ D+
Sbjct: 88 KAQEKDEPLLVENKRRFVLFPIKYNEIWQMYKKAEASFWTAEEIDLSKDINDWKNRMTDN 147
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL+++
Sbjct: 148 ERFFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDS 207
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIENIPC+ +KA+WAL WI ++ FAERLV FA VEGIFFSGSF +
Sbjct: 208 YIKDPKEADFLFNAIENIPCIKKKAEWALRWIADDEALFAERLVAFAAVEGIFFSGSFAS 267
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL+S L R + V ++ EAV IE +
Sbjct: 268 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNRPNPAIVEKIITEAVTIEKE 327
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ +ALP +L+GMN LM QY++FVADRLLV + ++ +
Sbjct: 328 YFTDALPASLLGMNCDLMCQYVEFVADRLLVALGNKKVYNVT 369
>gi|343470797|emb|CCD16606.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343476067|emb|CCD12726.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 341
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/277 (61%), Positives = 221/277 (79%), Gaps = 1/277 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
R++ Q +EP+L E R+ +FPI+Y +W+MYK+A++S WT EE+DL D+ WE+
Sbjct: 10 RDEEAAVQVAEEPLLKENPGRYVLFPIKYHDIWKMYKEAESSIWTVEEIDLGNDMVDWEK 69
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L + E+HFI HVLAFFAASDGIVLENLA RF++++Q+PEAR FYGFQIA+EN+HSE YS+
Sbjct: 70 LDNGERHFIKHVLAFFAASDGIVLENLAQRFMSEVQVPEARCFYGFQIAIENVHSETYSV 129
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGS 194
L++TYI D++EK+ L NAI IPC+ +KA WA+ WI SFA RLV FA VEGIFFSGS
Sbjct: 130 LIDTYITDTEEKNNLLNAISTIPCIKRKADWAIRWIGCDSSFATRLVAFAAVEGIFFSGS 189
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVE 253
FCA+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY ++ +L +++ ++ +AV
Sbjct: 190 FCALFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIKHKLSREEILSIICDAVS 249
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+C+ALP LIGMNS LM+QYI+FVADRL+V +
Sbjct: 250 IEREFICDALPVRLIGMNSDLMAQYIEFVADRLIVAL 286
>gi|417409802|gb|JAA51392.1| Putative ribonucleotide reductase beta subunit, partial [Desmodus
rotundus]
Length = 336
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/278 (62%), Positives = 218/278 (78%), Gaps = 1/278 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+ + +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L E
Sbjct: 11 EAKSSEEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TY
Sbjct: 71 KYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
I+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEG+FFSGSF AI
Sbjct: 131 IRDPKKREFLFNAIETMPYVKKKADWALRWIADRQSTFGERVVAFAAVEGVFFSGSFAAI 190
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AVEIE +F
Sbjct: 191 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVDAVEIEQEF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EALP LIGMN LM QYI+FVADRL V + +F
Sbjct: 251 LTEALPVGLIGMNCVLMKQYIEFVADRLFVELGFSKVF 288
>gi|417399461|gb|JAA46734.1| Putative ribonucleotide reductase beta subunit [Desmodus rotundus]
Length = 351
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/278 (62%), Positives = 218/278 (78%), Gaps = 1/278 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+ + +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L E
Sbjct: 26 EAKSSEEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDE 85
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TY
Sbjct: 86 KYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTY 145
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
I+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEG+FFSGSF AI
Sbjct: 146 IRDPKKREFLFNAIETMPYVKKKADWALRWIADRQSTFGERVVAFAAVEGVFFSGSFAAI 205
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AVEIE +F
Sbjct: 206 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVDAVEIEQEF 265
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EALP LIGMN LM QYI+FVADRL V + +F
Sbjct: 266 LTEALPVGLIGMNCVLMKQYIEFVADRLFVELGFSKVF 303
>gi|339246545|ref|XP_003374906.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
Length = 366
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/291 (62%), Positives = 218/291 (74%), Gaps = 2/291 (0%)
Query: 2 GSLKNETENEVNQREQGEQEQED-QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
G L ++ ++ EQ ++ +EP+L +RF + P+ Y +W MYKKA+ASFWT
Sbjct: 22 GKLTSKHDDPTTPMEQDAAAIDNCEEPLLRSNPKRFVLLPLEYPDIWAMYKKAEASFWTV 81
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDL +D W +L EKHFISHVLAFFAASDGIV ENL RF +IQ+ EAR FYGF
Sbjct: 82 EEVDLRKDANDWAKLNKDEKHFISHVLAFFAASDGIVFENLVERFSQEIQVTEARFFYGF 141
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAER 179
QIA+EN+HSEMYSLL++TYI+D E+ LFNAIE IPCV +KA WAL WI S F ER
Sbjct: 142 QIAIENVHSEMYSLLIDTYIRDPVERDFLFNAIETIPCVKKKADWALRWIGDRQSPFCER 201
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
LV FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS L+K+
Sbjct: 202 LVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSHLKKKP 261
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+V ++ EAV IE +F+ +ALP LIGMN LMSQYI++VADRLLV +
Sbjct: 262 TEDRVRQIITEAVSIEQEFLTDALPVRLIGMNCVLMSQYIEYVADRLLVEL 312
>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
H]
gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
knowlesi strain H]
Length = 349
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 216/269 (80%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++ +E E IL ++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D++ +E+L ++
Sbjct: 24 QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNEN 83
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFI HVLAFFAASDGIVLENLA++FL +QI EA+ FY FQIA+ENIHSE YSLL++
Sbjct: 84 EKHFIKHVLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDN 143
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAI
Sbjct: 144 YIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAI 203
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L + V ++V EAVE+E F
Sbjct: 204 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSF 263
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 264 ICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>gi|339898226|ref|XP_003392500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 392
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D E+HFI
Sbjct: 70 EEEPLQQENPLRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFI 129
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+TYI DS
Sbjct: 130 KHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDS 189
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA+FWLKK
Sbjct: 190 EEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKK 249
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE +F+C+A
Sbjct: 250 RGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDA 309
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
LP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 310 LPVRLIGMNAELMAQYIEFVADRLLVSLGE 339
>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
Length = 331
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 213/264 (80%), Gaps = 2/264 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EPIL E RF +FPI++K +WE YK A+ASFWTAEE+DLSQD + WE L + E HFI
Sbjct: 9 DEPILKENKDRFVLFPIQHKDIWEFYKMAEASFWTAEEIDLSQDQKDWENLTEGETHFIK 68
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMEN+HSE YSLL++TY+KD+K
Sbjct: 69 HVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAMENVHSETYSLLIDTYVKDNK 128
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LFNAI+ + CV +KA WAL WI ++AERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDKLFNAIDTMDCVKKKADWALRWIDEG-NYAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFACLLY+ L +L +KV ++ +AVEIE +FV ++L
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYNDHLVNKLSKEKVTAIITDAVEIEKEFVTDSL 247
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P LIGMN+ LM QYI+FVADRLL
Sbjct: 248 PVKLIGMNADLMCQYIEFVADRLL 271
>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/276 (63%), Positives = 214/276 (77%), Gaps = 1/276 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
++ +E E +EP+L E R+ +FPI+Y +W+ YKKA++S WT E + L D+ WE+L
Sbjct: 7 KRSRKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVENIYLGNDMTDWEKL 66
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L
Sbjct: 67 DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
++TY+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSF
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSF 186
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEI 254
CAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV I
Sbjct: 187 CAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSI 246
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
Length = 349
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 222/279 (79%), Gaps = 3/279 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + ++G +E E IL +++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D
Sbjct: 17 EREFSDLQKG---KEINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSD 73
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
++ +E+L ++EKHFI HVLAFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIH
Sbjct: 74 LKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIH 133
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SE YSLL++ YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEG
Sbjct: 134 SETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEG 193
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
I FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L Q V ++V
Sbjct: 194 ILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIV 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAVE+E F+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 254 KEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>gi|388581984|gb|EIM22290.1| ribonucleoside-diphosphate reductase small chain [Wallemia sebi CBS
633.66]
Length = 410
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/271 (64%), Positives = 219/271 (80%), Gaps = 2/271 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEK 80
+E+ EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W+ ++ EK
Sbjct: 83 KEEDEPLLKENPRRFVLFPIQYTEIWQMYKKAEASFWTAEEMDLSKDITDWQNKINKDEK 142
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFISHVLAFFAASDGIV ENL RF +++Q+ EAR FYGFQI MENIHSE YSLL++TYI
Sbjct: 143 HFISHVLAFFAASDGIVNENLLERFSSEVQLAEARCFYGFQIMMENIHSETYSLLIDTYI 202
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIF 199
+++++ LFNAIE IPC+ +KA WA+ WI+ SF ERLV FA VEGIFFSGSF +IF
Sbjct: 203 PEAEQRDYLFNAIETIPCIKRKADWAVKWINDEKASFGERLVAFAAVEGIFFSGSFASIF 262
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ L +R H + V ++ EAV IE +F+
Sbjct: 263 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFGHLNRRPHPKVVEKIITEAVTIEQEFL 322
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP ALIGMN+ LM QYI+FVADRLL+ +
Sbjct: 323 SDALPVALIGMNAKLMCQYIEFVADRLLISL 353
>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/290 (60%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIG+N LM QYI+FVADRLLV + +F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGVNCILMKQYIEFVADRLLVELGFSKVF 303
>gi|350423884|ref|XP_003493620.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Bombus impatiens]
Length = 384
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/266 (65%), Positives = 215/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI++ +W+MYKKA+ASFWT EEVDLS+DV W L EKHFISH
Sbjct: 65 EPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNHLTSDEKHFISH 124
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN+HSEMYS+L++TYI D KE
Sbjct: 125 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITDIKE 184
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIEN+PCVA+KA WAL+WI H S +F ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 185 RDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKR 244
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ +V ++ +AV+IE +F+ EALP
Sbjct: 245 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTEALP 304
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+IGMN +LM QYI+FVADRLL +
Sbjct: 305 VQMIGMNCTLMCQYIEFVADRLLTEL 330
>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
Length = 395
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/266 (64%), Positives = 215/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D+E+HFISH
Sbjct: 76 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNERHFISH 135
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +E
Sbjct: 136 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSILIDTYIRDPQE 195
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNA+E +P V +KA WAL WI S + +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 196 RDYLFNAVETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIFWLKKR 255
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNE+ISRDEGLHCDFA L++ L +R +++ ++ +AV+IE +F+ ALP
Sbjct: 256 GLMPGLTFSNEMISRDEGLHCDFAVLMFQHLVQRPSRERIIEIIRDAVQIEQEFLTVALP 315
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 316 VNLIGMNCDLMSQYIEFVADRLLVEL 341
>gi|389593521|ref|XP_003722014.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 388
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 60 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLND 119
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 120 GERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 179
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 180 TYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 239
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 240 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 299
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 300 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 335
>gi|146090970|ref|XP_001466408.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 388
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 60 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLND 119
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 120 GERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 179
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 180 TYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 239
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 240 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 299
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 300 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 335
>gi|432107625|gb|ELK32858.1| Ribonucleoside-diphosphate reductase subunit M2 B [Myotis davidii]
Length = 353
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/295 (61%), Positives = 225/295 (76%), Gaps = 5/295 (1%)
Query: 7 ETENEVNQR---EQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEE 62
ET E +R + E E + +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEE
Sbjct: 11 ETVTECRRRLSSDTNENEAKSSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEE 70
Query: 63 VDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
VDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI
Sbjct: 71 VDLSKDLPHWHKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQI 130
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLV 181
+EN+HSEMYSLL++TYI++ K++ LFNAIE +P V +KA WAL WI S F ER+V
Sbjct: 131 LIENVHSEMYSLLIDTYIREPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVV 190
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 191 AFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE 250
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 251 KRVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKIF 305
>gi|157869457|ref|XP_001683280.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 392
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 64 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLND 123
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 124 GERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 183
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 184 TYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 243
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 244 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 303
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 304 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 339
>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
Length = 393
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYIRDPNQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKHERIIEIIRDAVAIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVEL 339
>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|12644287|sp|P48592.2|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small subunit
gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
Length = 393
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVEL 339
>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
Length = 393
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVEL 339
>gi|392969753|ref|ZP_10335168.1| Ribonucleoside-diphosphate reductase [Fibrisoma limi BUZ 3]
gi|387841947|emb|CCH57226.1| Ribonucleoside-diphosphate reductase [Fibrisoma limi BUZ 3]
Length = 330
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 222/275 (80%), Gaps = 2/275 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI++ +W+MYKK +ASFWTAEE+DLSQD++ W+ L D E+HFISH
Sbjct: 8 EPILEEDKGRFVLFPIKHNDIWQMYKKHEASFWTAEEIDLSQDLKDWDNLNDGERHFISH 67
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA FL+++Q EA+ FYGFQ+ MENIHSE YSLL++TYIKD E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVE 127
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K R+ NAI+ IPCV +KA+WAL WI + SFAERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 128 KDRMLNAIDTIPCVQKKAEWALRWIENG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKRG 186
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGL+FSNELISRDEGLH DFACLLY+ ++ ++ ++++ +V +AV IE +FV +ALP
Sbjct: 187 LMPGLSFSNELISRDEGLHRDFACLLYTDHIKNKMPEEEIYQIVRDAVTIEQEFVSDALP 246
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+LIGMN+ LM QYI FVAD LLV + +++ ++
Sbjct: 247 VSLIGMNADLMKQYIAFVADHLLVSLGLRAIYNVS 281
>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
Length = 393
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVEL 339
>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
Length = 377
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 217/275 (78%), Gaps = 2/275 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHF 82
+ EP+L E +RF +FPI+Y +W MYK+AQASFWT+EE+ L+ D++ W ERL D+E++F
Sbjct: 60 EDEPLLRESQRRFVLFPIQYDDIWAMYKQAQASFWTSEEITLAYDMRDWTERLDDNERNF 119
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I HVLAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YSLL++TYIKD
Sbjct: 120 IKHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKD 179
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWL 201
+E+ LF AIE IPC+ +KA WAL WI S +FAERLV FA VEGIFFSGSF AIFWL
Sbjct: 180 PQERDHLFAAIETIPCIKRKADWALRWISDKSSTFAERLVAFAAVEGIFFSGSFAAIFWL 239
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEG+H +FACLL+S LR R H V +V EAV IE +F+ +
Sbjct: 240 KKRGLMPGLTFSNELISRDEGMHTEFACLLFSHLRHRPHPSVVQRIVKEAVAIEHEFLSD 299
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
ALP +LIGMN++LM QYI+FVADRLL + Q ++
Sbjct: 300 ALPVSLIGMNAALMRQYIEFVADRLLYSLGQNKIY 334
>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
gi|81885688|sp|Q6PEE3.1|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
Length = 351
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/296 (61%), Positives = 224/296 (75%), Gaps = 10/296 (3%)
Query: 11 EVNQREQGEQ---EQE------DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
E + E+GEQ E E ++EP+L + ++RF +FPI+Y +W MYK+AQASFWTAE
Sbjct: 8 EAARPEKGEQLCSETEENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAE 67
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQ
Sbjct: 68 EVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQ 127
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERL 180
I +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+
Sbjct: 128 ILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERV 187
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 188 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPS 247
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 248 EDRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIF 303
>gi|392574724|gb|EIW67859.1| hypothetical protein TREMEDRAFT_44873 [Tremella mesenterica DSM
1558]
Length = 405
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/287 (62%), Positives = 225/287 (78%), Gaps = 3/287 (1%)
Query: 7 ETENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
E +V QR G+ + +E EP+L E RF +FPI+Y+++W+MYK+AQASFWT+EE++L
Sbjct: 57 EPVEDVRQRFVGDLDCEEKDEPLLKETTSRFVLFPIKYREIWQMYKQAQASFWTSEEINL 116
Query: 66 SQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
+ D+ WE +L D+E++FI HVLAFFAASDGIV ENL RF ++Q EA+ FYGFQI M
Sbjct: 117 APDLHDWENKLNDNERYFIEHVLAFFAASDGIVNENLVERFSAEVQAAEAKCFYGFQIMM 176
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
ENIHSE YSLL++TYIKD ++ LF AI+ IPC+ +KA WAL WI + S FAERL+ F
Sbjct: 177 ENIHSETYSLLIDTYIKDVDRRNYLFEAIDTIPCIRKKADWALRWITDTRSTFAERLIAF 236
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL++ LR+R H
Sbjct: 237 AAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPST 296
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V ++ EAV+IE +F+ +ALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 297 VEKIIREAVKIEQEFLTDALPVSLIGMNAKLMCQYIEFVADRLLVAL 343
>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
laibachii Nc14]
Length = 1611
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/263 (67%), Positives = 208/263 (79%), Gaps = 1/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP L E RF +FPI+ ++W+MYKKA+ASFWTAEE+DL D+ W + D+E+HFI H
Sbjct: 70 EPFLRENPNRFVLFPIQQSEIWDMYKKAEASFWTAEEIDLVHDMNDWLNISDNERHFIKH 129
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F +++QIPEAR FYGFQIA+ENIHSE+YSLL++TYIKD E
Sbjct: 130 VLAFFAASDGIVNENLAMNFSSEVQIPEARCFYGFQIAIENIHSEVYSLLIDTYIKDPTE 189
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K L AIE IPCV KA+WAL W SFAER+V FA VEGIFFSGSFC+IFWLKKR
Sbjct: 190 KQHLLCAIETIPCVTNKAQWALKWCDPKCASFAERVVAFAAVEGIFFSGSFCSIFWLKKR 249
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL FSNELISRDEGLHCDFACL+YS L +L +H ++ +AV IE +FV ++LP
Sbjct: 250 GLMPGLCFSNELISRDEGLHCDFACLMYSKLVNKLPEASIHAIISDAVVIEQEFVRDSLP 309
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
LIGMNSSLM QYI+FVADRLL
Sbjct: 310 VELIGMNSSLMGQYIEFVADRLL 332
>gi|340726313|ref|XP_003401504.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Bombus terrestris]
Length = 384
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/266 (65%), Positives = 216/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI++ +W+MYKKA+ASFWT EEVDLS+D+ W L EKHFISH
Sbjct: 65 EPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDIFDWNHLNSDEKHFISH 124
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN+HSEMYS+L++TYI D+KE
Sbjct: 125 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITDTKE 184
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIEN+PCVA+KA WAL+WI H S +F ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 185 RDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKR 244
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ +V ++ +AV+IE +F+ +ALP
Sbjct: 245 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTDALP 304
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+IGMN +LM QYI+FVADRLL +
Sbjct: 305 VQMIGMNCTLMCQYIEFVADRLLTEL 330
>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
norvegicus]
gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
norvegicus]
Length = 351
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/296 (61%), Positives = 226/296 (76%), Gaps = 10/296 (3%)
Query: 11 EVNQREQGEQ------EQE---DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
E + E+GEQ E E ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAE
Sbjct: 8 EAARPEEGEQLCPETKENEVRSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAE 67
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQ
Sbjct: 68 EVDLSKDLPHWNKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQ 127
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERL 180
I +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+
Sbjct: 128 ILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERV 187
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 188 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPS 247
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 248 EERVMEIIVDAVKIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIF 303
>gi|154337607|ref|XP_001565036.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 392
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 64 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVALND 123
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 124 GERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 183
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 184 TYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 243
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 244 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 303
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 304 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 339
>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
Length = 405
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/278 (65%), Positives = 217/278 (78%), Gaps = 5/278 (1%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP+L E QRF +FPI+Y EMYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 KAKTPKELEAEEPLLQENPQRFVLFPIKYH---EMYKKAEASFWTAEEIDLSKDIHDWNN 122
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E+ FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 123 RLNDDERFFISHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYS 182
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI DS FA+RLV FA VEGIFFS
Sbjct: 183 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFS 242
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 243 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPTAVEAIITEAV 302
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
IE +F+ +ALPCAL+GMN+ LM QYI+FVADRLLV +
Sbjct: 303 SIEQEFLTDALPCALLGMNAKLMCQYIEFVADRLLVAL 340
>gi|345107208|ref|YP_004821373.1| ribonucleotide reductase small subunit [Yoka poxvirus]
gi|344267282|gb|AEN03609.1| ribonucleotide reductase small subunit [Yoka poxvirus]
Length = 321
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 211/266 (79%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI+Y+ +W MYKKA+ASFWT EEVDLS+D+ W L EKHFI H
Sbjct: 2 EPILKENKNRFVIFPIQYRDIWNMYKKAEASFWTVEEVDLSKDINDWNTLTSDEKHFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF +++QI EAR FYGFQ+A+ENIHSEMYSLL++ Y+KD+ E
Sbjct: 62 VLAFFAASDGIVNENLVERFCSEVQITEARCFYGFQMAIENIHSEMYSLLIDAYVKDTDE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFN+IE +PCV +KA WAL WIH++D S+ ERLV FA VEGIFFSGSF +IFWLKKR
Sbjct: 122 RMYLFNSIETMPCVKKKADWALKWIHNNDASYGERLVAFAAVEGIFFSGSFASIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L + +V ++ EAV IE +F+ +ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPNEDRVVSIISEAVNIEQEFLTDALP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN +M+ YIKFVADRLL+ +
Sbjct: 242 VKLIGMNCDMMNTYIKFVADRLLLEL 267
>gi|340726315|ref|XP_003401505.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Bombus terrestris]
Length = 366
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/266 (65%), Positives = 216/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI++ +W+MYKKA+ASFWT EEVDLS+D+ W L EKHFISH
Sbjct: 47 EPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDIFDWNHLNSDEKHFISH 106
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN+HSEMYS+L++TYI D+KE
Sbjct: 107 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITDTKE 166
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIEN+PCVA+KA WAL+WI H S +F ER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 167 RDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKR 226
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ +V ++ +AV+IE +F+ +ALP
Sbjct: 227 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTDALP 286
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+IGMN +LM QYI+FVADRLL +
Sbjct: 287 VQMIGMNCTLMCQYIEFVADRLLTEL 312
>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
Length = 348
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 212/266 (79%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W MYKKA+ASFWT EEVDLS+D WERL D+E+HFI H
Sbjct: 30 EPLLRENPRRFVIFPIQYPDMWRMYKKAEASFWTVEEVDLSKDTSDWERLNDNERHFIKH 89
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYS L++TY++ S+E
Sbjct: 90 VLAFFAASDGIVNENLVERFAQEVQVAEARCFYGFQIAMENVHSEMYSTLIDTYVRSSEE 149
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K RL NAIE +PCV +KA+WAL WI + +F ERLV FA VEG+FFSGSF AIFWLKKR
Sbjct: 150 KLRLLNAIETMPCVKEKAEWALRWIAGREAAFGERLVAFAAVEGVFFSGSFAAIFWLKKR 209
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLL+ L +R +V +V +AV IE +F+ EALP
Sbjct: 210 GLMPGLTFSNELISRDEGLHCDFACLLFKHLVQRPSAARVREIVTDAVAIEQRFLTEALP 269
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
L+G+N MSQYI+FVADRLL+ +
Sbjct: 270 VRLLGLNCETMSQYIEFVADRLLLEL 295
>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
Length = 343
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/274 (64%), Positives = 214/274 (78%), Gaps = 2/274 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L E +RF +FPI Y+ +W MYKKA+ASFWT EEVDLS+D+ WERL E+HFI
Sbjct: 16 NEPLLQENPRRFVLFPIEYEDIWRMYKKAEASFWTVEEVDLSKDMNDWERLSSGEQHFIK 75
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYS+L++TYI++
Sbjct: 76 HVLAFFAASDGIVNENLLERFAQEVQVSEARCFYGFQIAMENVHSEMYSVLIDTYIRERA 135
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+ RLFNAIE IP V +KA WA +WI S+ +F ERL+ FA VEG+FFSGSF AIFWLKK
Sbjct: 136 ERERLFNAIETIPAVKRKADWAFNWITSTTATFGERLLAFAVVEGVFFSGSFAAIFWLKK 195
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEG+HCDFA LL+ L R ++V +V EAV IE +F+ +A
Sbjct: 196 RGLMPGLTFSNELISRDEGMHCDFAVLLFKRYLVNRPSEERVGEIVREAVTIEQEFLTDA 255
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP +LIGMN LMSQYI+FVADRLLV + ++
Sbjct: 256 LPVSLIGMNCGLMSQYIEFVADRLLVDLGMKRIY 289
>gi|1710398|sp|P50650.1|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
Length = 349
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/279 (64%), Positives = 222/279 (79%), Gaps = 3/279 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + ++G +E E IL +++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D
Sbjct: 17 EREFSDLQKG---KEINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSD 73
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
++ +E+L ++EKHFI HVLAFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIH
Sbjct: 74 LKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIH 133
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SE YSLL++ YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEG
Sbjct: 134 SETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEG 193
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
I FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L Q + ++V
Sbjct: 194 ILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIV 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAVE+E F+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 254 KEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
Length = 393
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/272 (63%), Positives = 217/272 (79%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D+E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMTDWVRLTDNERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S + +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 RDYLFNAIETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA +++ L +R +++ +V +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVMMFQHLVQRPSRERIIEIVSDAVTIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN +LMS+YI+FVADRLLV + ++
Sbjct: 314 VNLIGMNCALMSEYIEFVADRLLVELGVGKIY 345
>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
dendrobatidis JAM81]
Length = 336
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 208/268 (77%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
EPIL +R +FPI+Y VW MYKKA+ASFWTAEEVDLS+D WE RL D E++FI
Sbjct: 14 NEPILTPDPRRSVLFPIKYPAVWRMYKKAEASFWTAEEVDLSKDTLDWEERLTDDERYFI 73
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S VLAFFAASDGIV ENL RF D+ IPEAR FY FQI +ENIHSEMYSLL++TYIKD
Sbjct: 74 SRVLAFFAASDGIVNENLVERFSQDVHIPEARYFYDFQIMIENIHSEMYSLLIDTYIKDR 133
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LF+AI+ +PC+ +KA WAL WI SF ERLV FA VEGIFFSGSF +IFWLK
Sbjct: 134 KERAFLFDAIDTVPCIRKKADWALRWISDKKSSFGERLVAFAAVEGIFFSGSFASIFWLK 193
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLH DFACLL++LL + + ++HEAV IE +F E+
Sbjct: 194 KRGLMPGLTFSNELISRDEGLHTDFACLLFTLLNNKPTDSVIQQIIHEAVTIEQEFSTES 253
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP ALIGMN++LM QYI+FVADRL + +
Sbjct: 254 LPVALIGMNANLMKQYIEFVADRLFIEL 281
>gi|401424595|ref|XP_003876783.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 388
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 60 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALND 119
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 120 GERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 179
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 180 TYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 239
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 240 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 299
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 300 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 335
>gi|401422190|ref|XP_003875583.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 392
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 64 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALND 123
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 124 GERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 183
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 184 TYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 243
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 244 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 303
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 304 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 339
>gi|392568086|gb|EIW61260.1| hypothetical protein TRAVEDRAFT_63110 [Trametes versicolor
FP-101664 SS1]
Length = 428
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/287 (63%), Positives = 224/287 (78%), Gaps = 5/287 (1%)
Query: 9 ENEVNQREQ--GEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+NE N E+ GE + E QEP+L E +RF +FPI+Y ++W+MYK AQASFWT EE++L
Sbjct: 75 QNEENPHERFVGEVDLPEYQEPLLTETTRRFVLFPIQYDEIWQMYKTAQASFWTVEEINL 134
Query: 66 SQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
S D+ W ++L D+E+HFIS+VLAFFAASDGIV ENL RF N++Q EAR FYGFQI M
Sbjct: 135 SYDLMDWSDKLNDNERHFISYVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMM 194
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
EN+HSE YSLL++TYI+D + LF+AI+ IPC+ +KA WAL WI S F ERLV F
Sbjct: 195 ENVHSETYSLLIDTYIRDPAARAFLFDAIDTIPCIKKKADWALRWIADERSAFTERLVAF 254
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR+R H +
Sbjct: 255 AAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFHHLRRRAHPNR 314
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V ++ EAV+IE +F+ EALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 315 VLKIIIEAVDIEKEFLTEALPVSLIGMNADLMCQYIEFVADRLLVAL 361
>gi|255037048|ref|YP_003087669.1| ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
Length = 331
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 216/266 (81%), Gaps = 2/266 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
QE QEP+L E RF +FPI++ +WEMYK+ +ASFWTAEE+DLSQD++ WE L D E
Sbjct: 3 QELSRQEPLLTEDPLRFVLFPIKHSDIWEMYKRHEASFWTAEEIDLSQDMKDWENLSDGE 62
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFISHVLAFFAASDGIV ENLA FL+++Q EA+ FYGFQIAMENIHSE YSLL++TY
Sbjct: 63 RHFISHVLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIAMENIHSETYSLLIDTY 122
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
IKDS EK RL AIE IPCV +KA WAL WI S FAER++ FA VEGIFFSGSFC+IF
Sbjct: 123 IKDSAEKDRLLRAIETIPCVQKKADWALKWIDSP-VFAERIIAFAAVEGIFFSGSFCSIF 181
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGL+FSNELISRDEGLHC+FACLLY+ + +L ++V ++ +AVEIE +F
Sbjct: 182 WLKKRGLMPGLSFSNELISRDEGLHCEFACLLYTKHILNQLPQERVIEIMLDAVEIEKEF 241
Query: 259 VCEALPCALIGMNSSLMSQYIKFVAD 284
V EALP +LIGMN+ LM QYI+++AD
Sbjct: 242 VSEALPVSLIGMNADLMKQYIEYIAD 267
>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
Length = 394
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/272 (63%), Positives = 217/272 (79%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D+E+HFISH
Sbjct: 75 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNERHFISH 134
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 135 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 194
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S + +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 195 RDYLFNAIETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIFWLKKR 254
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 255 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPCRERIIEIISDAVTIEQEFLTDALP 314
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN +LMS+YI+FVADRLLV + L+
Sbjct: 315 VNLIGMNCALMSEYIEFVADRLLVELGVGKLY 346
>gi|154340038|ref|XP_001565976.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 388
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 60 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVALND 119
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 120 GERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 179
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 180 TYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 239
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 240 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 299
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 300 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 335
>gi|344303170|gb|EGW33444.1| hypothetical protein SPAPADRAFT_50323 [Spathaspora passalidarum
NRRL Y-27907]
Length = 419
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/271 (64%), Positives = 221/271 (81%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+EQE +EP+L E ++RF MFPIRY ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D+
Sbjct: 88 REQESEEPLLKENSRRFVMFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDN 147
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FIS VLAFFAASDG+V ENL F ++QIPEA+AFYGFQI +E IHSE+YSLL++T
Sbjct: 148 ERYFISRVLAFFAASDGLVNENLVENFSAEVQIPEAKAFYGFQIMIEMIHSEVYSLLIDT 207
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
Y+KD +E LF+AI IPC+A+KA WAL WI +D+ +AERLV FA +EGIFFSGSF +
Sbjct: 208 YVKDPQEAEFLFDAIHTIPCIAKKADWALKWIADTDALYAERLVAFAAIEGIFFSGSFAS 267
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL++ L+ R + V ++ EAV IE +
Sbjct: 268 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFAHLKNRPDPEIVERIIVEAVAIEKE 327
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP +L+GMN +LM QY++FVADRLLV
Sbjct: 328 YFTDALPVSLLGMNCALMCQYVEFVADRLLV 358
>gi|452987065|gb|EME86821.1| hypothetical protein MYCFIDRAFT_49456 [Pseudocercospora fijiensis
CIRAD86]
Length = 418
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/273 (64%), Positives = 219/273 (80%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+E+E EPIL E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W +RL D
Sbjct: 75 KEEEAIEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDD 134
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FISHVLAFFAASDGIV ENL RF +++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 135 ERYFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDT 194
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YI + K++ LFNAI+NIPC+ +KA WAL WI +S FA RL+ FA VEGIFFSGSF +
Sbjct: 195 YISEPKQRSYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAVEGIFFSGSFAS 254
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLM GLTFSNELISRDEG+H DFACLL+S L+ + V ++ EAV IE +
Sbjct: 255 IFWLKKRGLMAGLTFSNELISRDEGMHTDFACLLFSHLKNKPDASLVQSIIVEAVAIEQE 314
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ +ALP L+GMN+ LM QYI+FVADRLL+ +
Sbjct: 315 FLTDALPVMLLGMNAKLMCQYIEFVADRLLLAL 347
>gi|392397812|ref|YP_006434413.1| ribonucleotide reductase subunit beta [Flexibacter litoralis DSM
6794]
gi|390528890|gb|AFM04620.1| ribonucleotide reductase, beta subunit [Flexibacter litoralis DSM
6794]
Length = 331
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/267 (63%), Positives = 219/267 (82%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF +FPI++ +W+MYK+A+ASFWTAEE+DLS D++ WE + ++E+HF+ H
Sbjct: 12 EPLLAENPNRFVLFPIKHDDIWQMYKQAEASFWTAEEIDLSNDMRDWEAMSENERHFVKH 71
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL F+ ++Q+PEAR FYGFQ+ ENIH+E YSLL++ YIK +KE
Sbjct: 72 VLAFFAASDGIVNENLVVNFMKEVQLPEARCFYGFQVMAENIHAETYSLLIDGYIKGTKE 131
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNA++N+ CVA+K WAL WI SD+FAERLV FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 132 KDYLFNALDNLECVAKKGNWALKWIE-SDNFAERLVAFAAVEGIFFSGSFCSIFWLKKRG 190
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLHCDFACLLY + + +L +++ ++ +AV+IE +FV +A+P
Sbjct: 191 LMPGLTFSNELISRDEGLHCDFACLLYNNYIENKLPKERIIEIITDAVKIEQEFVTDAIP 250
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIH 291
+LIGMN+ LMSQYI+FVADRLL ++
Sbjct: 251 VSLIGMNADLMSQYIEFVADRLLNELN 277
>gi|348675019|gb|EGZ14837.1| hypothetical protein PHYSODRAFT_346505 [Phytophthora sojae]
Length = 386
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/301 (60%), Positives = 227/301 (75%), Gaps = 7/301 (2%)
Query: 5 KNETENEVNQREQGEQEQED------QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFW 58
K++ E E + E E ++++ EP L+ RF +FPI+ VW+MYKKA+ASFW
Sbjct: 40 KSQEEEEQPKLEMSEYKRKEVNGELQPEPYLVSNPNRFVLFPIQEHDVWQMYKKAEASFW 99
Query: 59 TAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFY 118
TAEE+DL D+ W++L D+E+ FI HVLAFFAASDGIV ENLA F N++Q+PEAR FY
Sbjct: 100 TAEELDLVHDLNDWQKLTDNERFFIKHVLAFFAASDGIVNENLAMNFSNEVQVPEARCFY 159
Query: 119 GFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFA 177
GFQIA+ENIH+E+YSLL++TYIKD+ EK+ L AIE IPCV +KA WAL W S+
Sbjct: 160 GFQIAIENIHAEVYSLLIDTYIKDTMEKNHLLRAIETIPCVKKKAHWALKWCDPRVSSYP 219
Query: 178 ERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK 237
ERL+ FA VEGIFFSGSFC+IFWLKKRGLMPGL+FSNELISRDEG+H DFACL+YS L
Sbjct: 220 ERLLAFAAVEGIFFSGSFCSIFWLKKRGLMPGLSFSNELISRDEGMHTDFACLMYSKLVN 279
Query: 238 RLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFI 297
+L +VH +V EAV IE +FVC++LP LIGMNS+LM QYI+FVADRLL + L+
Sbjct: 280 KLPESRVHEIVREAVTIEHEFVCDSLPVELIGMNSTLMCQYIEFVADRLLYSLGVPKLYN 339
Query: 298 I 298
+
Sbjct: 340 V 340
>gi|426198205|gb|EKV48131.1| hypothetical protein AGABI2DRAFT_116955 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/287 (63%), Positives = 218/287 (75%), Gaps = 3/287 (1%)
Query: 13 NQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQH 71
QR G+ + E+QEP+L E +RF +FPI+Y ++W YKKAQASFWT EE+DLS D+
Sbjct: 24 TQRFVGDVDLPEEQEPLLKESQRRFVLFPIQYPEIWRYYKKAQASFWTVEEIDLSHDITD 83
Query: 72 WE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W RL E+ FISH+LAFFAASDGIV ENL RF N++Q+ EAR FYGFQI MENIHSE
Sbjct: 84 WAYRLNKDERRFISHILAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSE 143
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGI 189
YSLL++TYIKD E+ LF+A+E IP + +KA WAL WI S SFAERLV FA VEG+
Sbjct: 144 TYSLLIDTYIKDPDERKHLFDAVETIPTIKRKAVWALRWISSRGLSFAERLVAFAAVEGV 203
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSGSF AIFW+KKRGLMPGLTFSNELI+RDEG+H DFACLL++ LR+R H +V ++
Sbjct: 204 FFSGSFAAIFWIKKRGLMPGLTFSNELITRDEGMHTDFACLLFTHLRRRPHPNRVLEIIT 263
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAV IE F +ALP ALIGMNS LM QYI+FVADRLLV + +
Sbjct: 264 EAVAIEKDFFGDALPVALIGMNSKLMCQYIEFVADRLLVSLGNAKYY 310
>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/257 (68%), Positives = 210/257 (81%), Gaps = 1/257 (0%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASD 94
RF +FP+ Y ++WEMYKK ASFWT EEVDL D+ WE+L +E+HFI VLAFFAASD
Sbjct: 28 RFVLFPLHYPKMWEMYKKTMASFWTVEEVDLHTDITEWEKLNSNEQHFIKTVLAFFAASD 87
Query: 95 GIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE 154
GIV ENL +F+ +Q+PEAR FYGFQIA+ENIH+EMYS L+ET IKD +E++RLF+AI+
Sbjct: 88 GIVNENLCQQFMAQVQVPEARCFYGFQIAIENIHAEMYSTLIETLIKDQRERNRLFHAID 147
Query: 155 NIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 214
+P V +KA WAL WI+S + FAERL+ FACVEGIFFSGSFC+IFWLKKRGLMPGL+FSN
Sbjct: 148 TVPSVQKKANWALKWINSENLFAERLLAFACVEGIFFSGSFCSIFWLKKRGLMPGLSFSN 207
Query: 215 ELISRDEGLHCDFACLLYSLLR-KRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSS 273
ELISRDEGLH DFACLLYS L+ +L Q VH +V+EAVEIE +F+ E+LP LIGMNS
Sbjct: 208 ELISRDEGLHTDFACLLYSTLKYTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMNSR 267
Query: 274 LMSQYIKFVADRLLVHI 290
LM QYI+ VADRLLV I
Sbjct: 268 LMQQYIEMVADRLLVSI 284
>gi|389585905|dbj|GAB68635.1| ribonucleoside-diphosphate reductase small chain [Plasmodium
cynomolgi strain B]
Length = 355
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 216/269 (80%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++ +E E IL ++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D++ +E+L ++
Sbjct: 30 QKSKEVNEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNEN 89
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFI HVLAFFAASDGIVLENLA++FL +QI EA+ FY FQIA+ENIHSE YSLL++
Sbjct: 90 EKHFIKHVLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDN 149
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAI
Sbjct: 150 YIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAI 209
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L + V ++V EAVE+E F
Sbjct: 210 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSF 269
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 270 ICESLPCDLIGMNSRLMSQYIEFVADRLL 298
>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
morsitans]
Length = 396
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/266 (64%), Positives = 216/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEEVDLS+D+ W RL D E+HFISH
Sbjct: 77 EPLLKENPKRFVIFPIQYPEIWKMYKKAEASFWTAEEVDLSKDMDDWNRLSDGERHFISH 136
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYSLL+ETYI D KE
Sbjct: 137 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSLLIETYIMDEKE 196
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA+WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 197 REYLFNAIETMPLVKKKAEWALAWISSHSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 256
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
G+MPGLTFSNE+ISRDEGLHC+FA L++ L ++ +++ ++ +AV+IE +F+ EALP
Sbjct: 257 GIMPGLTFSNEMISRDEGLHCEFAVLMFKHLIQKPSKERILEIITDAVKIEKEFLTEALP 316
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS M +YI++VADRLL+ +
Sbjct: 317 VDLIGMNSESMCKYIEYVADRLLLEL 342
>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
Length = 324
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/275 (65%), Positives = 219/275 (79%), Gaps = 3/275 (1%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHF 82
+ EPIL E RF +FPI+++ +W YKKA+ASFWTAEE+DLS D+ WE +L D E+HF
Sbjct: 3 NAEPILSENKNRFVLFPIQHEDIWSFYKKAEASFWTAEEIDLSPDLIDWETKLSDDERHF 62
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
+ HVLAFFAASDGIV ENLA FL ++Q EA+ FYGFQ+AMENIHSE YSLL++TYIKD
Sbjct: 63 VKHVLAFFAASDGIVNENLAEHFLAEVQYTEAKFFYGFQVAMENIHSETYSLLIDTYIKD 122
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KEK+ LFNA++ I CV +KA WAL WI + SFAERLV FA VEGIFFSGSFC+IFWLK
Sbjct: 123 QKEKNHLFNALDTIDCVRKKADWALRWIDNG-SFAERLVAFAAVEGIFFSGSFCSIFWLK 181
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCE 261
KRGLMPGL+FSNELISRDEGLHCDFACLLY+ L +L ++V ++ +AVEIE +FV +
Sbjct: 182 KRGLMPGLSFSNELISRDEGLHCDFACLLYTKHLIHQLSKEQVQEIILDAVEIEKEFVTD 241
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
ALP LIGMN+ LM+QYI+FVADRLL + +F
Sbjct: 242 ALPVKLIGMNADLMAQYIEFVADRLLTELGNPKVF 276
>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
sapiens]
Length = 423
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/276 (63%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 100 KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKY 159
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 160 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 219
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEG+FFSGSF AIFW
Sbjct: 220 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFW 279
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+
Sbjct: 280 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLT 339
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 340 EALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 375
>gi|156545974|ref|XP_001606963.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Nasonia vitripennis]
Length = 388
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/263 (65%), Positives = 214/263 (81%), Gaps = 1/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF +FPI++ +W MYKKA+ASFWT EEVDLS+D+ W RL D+E+HFISH
Sbjct: 67 EPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADWNRLNDNERHFISH 126
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+ENIHSEMYSLL++TYI D+ +
Sbjct: 127 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQ 186
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCVA+KA WAL+WI H S +FAER++ FA VEGIFFSGSF AIFWLKKR
Sbjct: 187 RQFLFNAIETLPCVAKKANWALNWISHDSATFAERVIAFAAVEGIFFSGSFAAIFWLKKR 246
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ ++V ++ +AV IE +F+ +ALP
Sbjct: 247 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSEERVISIIKDAVTIEQEFLTDALP 306
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+IGMN LM QYI+FVADRLL
Sbjct: 307 VEMIGMNCRLMCQYIEFVADRLL 329
>gi|407406733|gb|EKF30906.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi marinkellei]
Length = 337
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/272 (61%), Positives = 216/272 (79%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
Q QE +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DLS D+ WE++ + E
Sbjct: 11 QSQEQEEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMSEGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+ FI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIA+EN+HSE YS+LL+ Y
Sbjct: 71 RFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDMY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
I D EK R+ +AI IPC+ +KA WA+ WI SS SFAERLV FA VEGIFFSGSFCA+F
Sbjct: 131 ITDPTEKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + + +L +++ ++ AV+IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPKERIRDIICSAVDIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+C+A+P L+GMN+ LMS YI+FVADRLL+ +
Sbjct: 251 ICDAIPVRLLGMNADLMSTYIEFVADRLLLAL 282
>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase small chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase small chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 380
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 215/271 (79%), Gaps = 2/271 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EK 80
+DQEP+L E RF +FPI+Y ++W YK+A+ASFWTAEE+DLS+D+ W+ L++ EK
Sbjct: 44 SDDQEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWDNKLNADEK 103
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFI HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQI MENIHSE+YSLL++TY+
Sbjct: 104 HFIKHVLAFFAASDGIVNENLIERFSGEVQVAEARCFYGFQIMMENIHSEVYSLLIDTYV 163
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
++ E+ LF+AI+ IPC+ +KA WAL WI S F ERL+ FA VEGIFFSGSF +IF
Sbjct: 164 REPTERAHLFDAIDTIPCIRKKADWALTWISDKKSTFGERLIAFAAVEGIFFSGSFASIF 223
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACLL++ L +R H V ++ +AVEIE +F+
Sbjct: 224 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLERRPHPDTVQAIIAQAVEIEKEFL 283
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPC LIGMN+ LM QYI+FVADRLLV +
Sbjct: 284 SDALPCKLIGMNADLMCQYIEFVADRLLVAL 314
>gi|405123346|gb|AFR98111.1| ribonucleotide reductase subunit [Cryptococcus neoformans var.
grubii H99]
Length = 389
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 218/271 (80%), Gaps = 2/271 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E EP+L E N RF +FPI+Y ++W+MYKKAQASFWTAEE++L+ D+ WE +L D+E+
Sbjct: 58 EEKDEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNER 117
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+FI HVLAFFAASDGIV ENL RF ++QI EA++FYGFQI MENIH+E YSLL++TYI
Sbjct: 118 YFIEHVLAFFAASDGIVNENLVERFSGEVQIAEAKSFYGFQIMMENIHAETYSLLIDTYI 177
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD+ ++ LF+A++ IPC+ +KA WAL WI S F ERL+ FA VEGIFFSGSF +IF
Sbjct: 178 KDTARRNFLFDAMDTIPCIRKKADWALRWISDQKSCFGERLIAFAAVEGIFFSGSFASIF 237
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACLL++ LR+R H + ++ EAV IE +F+
Sbjct: 238 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIAKIIKEAVIIEQEFL 297
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 298 TDALPVSLIGMNAKLMCQYIEFVADRLLVAL 328
>gi|390945295|ref|YP_006409056.1| ribonucleotide reductase subunit beta [Belliella baltica DSM 15883]
gi|390418723|gb|AFL86301.1| ribonucleotide reductase, beta subunit [Belliella baltica DSM
15883]
Length = 326
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 218/266 (81%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD+ W+ L D E+HFISH
Sbjct: 5 EPILQENKNRFVLFPIQHNDIWQYYKKAEASFWTAEEIDLSQDLSDWKNLNDGERHFISH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F++++Q EA+ FYGFQIAMENIHSE YSLL++TYIKD++E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDNQE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ +L NAIE+I CV +KA+WAL WI + SF ERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLHCDFAC LY+ ++ +L + V ++ +AVEIE +FV +ALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTEHVKNQLPKETVAMIIKDAVEIEKEFVTDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS LM QYI+FVADRLL+ +
Sbjct: 244 VRLIGMNSDLMCQYIEFVADRLLMEL 269
>gi|448118274|ref|XP_004203456.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|448120689|ref|XP_004204039.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|359384324|emb|CCE79028.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|359384907|emb|CCE78442.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
Length = 425
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/282 (61%), Positives = 219/282 (77%), Gaps = 2/282 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L+E +RF +FPIRY ++W+MYKKA+ASFWTAEE+DL +D W+ ++ ++
Sbjct: 95 KEMEKNEPLLVENKRRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLGKDTHDWQNKMNEN 154
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS +LAFFAASDGIV ENL F ++Q+PEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 155 ERFFISRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDT 214
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIENIPC+ +KA WAL WI+ D+ F ERLV FA VEGIFFSGSF +
Sbjct: 215 YIKDPKEADFLFNAIENIPCIQKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFAS 274
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL+S L R + + V ++ EAV IE +
Sbjct: 275 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLENRPNPEIVEKIITEAVGIEKE 334
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
F +ALP +L+GMN+ LM QY++FVADRLLV + ++ +
Sbjct: 335 FFTDALPVSLLGMNAKLMCQYVEFVADRLLVALGNKKVYNVT 376
>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 379
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/282 (60%), Positives = 222/282 (78%), Gaps = 2/282 (0%)
Query: 11 EVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDV 69
E N+R GE + E +EP+L +R ++PI+Y ++W YK+AQASFWTAEE+DLS D+
Sbjct: 39 ERNRRFVGEVDLPESEEPLLKPSPKRLTLYPIQYPEIWTHYKRAQASFWTAEEIDLSHDM 98
Query: 70 QHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHS 129
W +L ++E+HF+S +LAFFA+SDGIV ENL RF +++Q+PEAR FYGFQ+ +EN+HS
Sbjct: 99 MDWSKLTNAERHFLSRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHS 158
Query: 130 EMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEG 188
E YSLL++TYIKD +E+ LF AIE IP + +KA+WAL W S +FAERLV FA VEG
Sbjct: 159 ETYSLLIDTYIKDPEERDFLFRAIETIPSIQRKAEWALTWTSDKSTTFAERLVAFAVVEG 218
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
+FFSGSF AIFW++KRGL+PGLTFSNELISRDEG+H DFACLL++ LRKR H + +V
Sbjct: 219 VFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMHTDFACLLFAYLRKRPHSDTILAIV 278
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVEIE +F +ALP +LIGMNSSLM+QYI+FVADRLL +
Sbjct: 279 TEAVEIEKEFFSDALPVSLIGMNSSLMNQYIEFVADRLLTSL 320
>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 354
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 26 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALND 85
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 86 GERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 145
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
TYI DS+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA
Sbjct: 146 TYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCA 205
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE
Sbjct: 206 LFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIER 265
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+F+C+ALP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 266 EFICDALPVRLIGMNAELMAQYIEFVADRLLVSLGE 301
>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|374105604|gb|AEY94515.1| FAAL136Cp [Ashbya gossypii FDAG1]
Length = 422
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/271 (64%), Positives = 216/271 (79%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+EQE EP+LME +RF +FPI+Y +W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 91 KEQEKNEPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTEN 150
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 151 ERFFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDT 210
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIE IP + +KA+WA+ WI D+ FAERLV FA VEGIFFSGSF A
Sbjct: 211 YIKDPKEADHLFNAIETIPEIKEKAEWAIRWIQDKDALFAERLVAFAAVEGIFFSGSFAA 270
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKK+GLMPGLTFSNELI RDEGLH DFACLL++ L + + V ++ EAVEIE +
Sbjct: 271 IFWLKKKGLMPGLTFSNELICRDEGLHTDFACLLFAHLNNKPDTEIVEKIITEAVEIEKR 330
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +A+P AL+GMNSSLM+QY++FVADRLLV
Sbjct: 331 YFQDAIPVALLGMNSSLMNQYVEFVADRLLV 361
>gi|397502371|ref|XP_003821834.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 B [Pan paniscus]
Length = 515
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/276 (62%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 192 KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKY 251
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 252 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 311
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +K WAL WI S F ER+V FA VEG+FFSGSF AIFW
Sbjct: 312 DPKKREFLFNAIETMPYVKKKXDWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFW 371
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+
Sbjct: 372 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLT 431
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 432 EALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 467
>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
Length = 424
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 214/260 (82%), Gaps = 2/260 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFA 91
++RF +FPIR+ ++W+MYKKA+ASFWTAEE+DLS+D+ W+ +L D+E+HFISHVLAFFA
Sbjct: 101 SRRFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFA 160
Query: 92 ASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
ASDGIV ENL RF +++Q EAR FYGFQI MENIHSE YSLL++TYI++ +++ LF+
Sbjct: 161 ASDGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREYLFD 220
Query: 152 AIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A+E IP V QKA WAL WI +FAERLV FA VEGIFFSGSF +IFWLKKRGLMPGL
Sbjct: 221 AVETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGL 280
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
TFSNELISRDEGLH DFACLL+S LR+R H V ++ EAVEIE F+CE++P ALIGM
Sbjct: 281 TFSNELISRDEGLHTDFACLLFSHLRRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGM 340
Query: 271 NSSLMSQYIKFVADRLLVHI 290
NS LM QYI++VADRLLV +
Sbjct: 341 NSKLMCQYIEYVADRLLVSL 360
>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
Length = 333
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 205/262 (78%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L +EKHFI H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S S+ ERLV FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLVAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLI 277
>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 401
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 216/269 (80%), Gaps = 2/269 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E EP+L E N RF +FPI+Y ++W+MYKKAQASFWTAEE++L+ D+ WE +L D+E+
Sbjct: 70 EEKDEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNER 129
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+FI HVLAFFAASDGIV ENL RF ++Q EA++FYGFQI MENIH+E YSLL++TYI
Sbjct: 130 YFIEHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYI 189
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD+ ++ LF+AI+ IPC+ +KA WAL WI S F ERL+ FA VEGIFFSGSF +IF
Sbjct: 190 KDTARRNFLFDAIDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIF 249
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACLL++ LR+R H + ++ EAV IE +F+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIARIIKEAVTIEQEFL 309
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ALP +LIGMN+ LM QYI+FVADRLLV
Sbjct: 310 TDALPVSLIGMNAKLMCQYIEFVADRLLV 338
>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
Length = 345
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D E+HFI
Sbjct: 23 EEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFI 82
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+TYI DS
Sbjct: 83 KHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDS 142
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RL +AI+ IPC+ +KA+WA+ WI SS SF ERL+GFA VEGIFFSGSFCA+FWLKK
Sbjct: 143 EEKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKK 202
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE +F+C+A
Sbjct: 203 RGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDA 262
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
LP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 263 LPVRLIGMNAELMAQYIEFVADRLLVSLGE 292
>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
PN500]
Length = 323
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 218/267 (81%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
+EPIL E RF +FPI+++ VW+ YKKA+ASFWTAEE+DL+ D++ W ++L D+E++FI
Sbjct: 4 EEPILKENKDRFVLFPIKHQDVWKFYKKAEASFWTAEEIDLAPDLRDWQDKLNDNERYFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S+VLAFFAASDGIV ENLA RF++++QIPEAR FYGFQIAMENIHSE YSLL++TYI++
Sbjct: 64 SNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAMENIHSETYSLLIDTYIQNP 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK +LFNAIE IPCV +KA WAL WI +S SFAERLV FA VEGIFFSGSFC+IFWLKK
Sbjct: 124 AEKTKLFNAIETIPCVQKKANWALKWISNSTSFAERLVAFAAVEGIFFSGSFCSIFWLKK 183
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
R LM GL SNE ISRDEGLHC FACLLYS L +L + + ++ +AV+ E +F+ ++L
Sbjct: 184 RNLMSGLCSSNEFISRDEGLHCQFACLLYSKLVNKLDAKTIESIIRDAVDCEKEFITQSL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN+ LMS+YI+FVAD L+V +
Sbjct: 244 PVDLIGMNNRLMSEYIEFVADHLIVAL 270
>gi|384496849|gb|EIE87340.1| ribonucleoside-diphosphate reductase small chain [Rhizopus delemar
RA 99-880]
Length = 344
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/282 (61%), Positives = 226/282 (80%), Gaps = 1/282 (0%)
Query: 10 NEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDV 69
N++ + + ++QE IL E +RFC+FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D
Sbjct: 8 NKLQELSLKKNVDDEQEEILRENTRRFCLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDQ 67
Query: 70 QHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
WE ++ ++E+ FIS VLAFFA SDGIV ENL F ++++IPEA+ FYGFQI +ENIH
Sbjct: 68 HDWENKMSENERFFISRVLAFFAGSDGIVNENLVQNFCDEVKIPEAKCFYGFQIMIENIH 127
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
+E YSLL++TYIKD++EK LF+AI+ IPC+ +KA WA WI S++SFAERLV FA VEG
Sbjct: 128 AETYSLLIDTYIKDNQEKEMLFSAIDTIPCIKRKADWAFKWISSNESFAERLVAFAAVEG 187
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF +IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ +RK+ Q+V ++
Sbjct: 188 IFFSGSFASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFTHIRKQPSQQRVKDII 247
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAV IE +F+ +ALP ALIGMN++LM QYI+FVADRL+V +
Sbjct: 248 VEAVGIEQEFLSDALPVALIGMNATLMCQYIEFVADRLMVAL 289
>gi|449549663|gb|EMD40628.1| hypothetical protein CERSUDRAFT_121331 [Ceriporiopsis subvermispora
B]
Length = 425
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/289 (63%), Positives = 223/289 (77%), Gaps = 3/289 (1%)
Query: 5 KNETENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
K++ ++ QR GE + E EP+LM+ +RF +FPI+Y ++W YKKA+ASFWTAEE+
Sbjct: 73 KHDNVEDLQQRFVGEIDLPEHMEPLLMDSKRRFVLFPIQYHEIWRFYKKAEASFWTAEEI 132
Query: 64 DLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
DLS D WE +L D+E+ FISHVLAFFAASDGIV ENL RF N++Q EAR FYGFQI
Sbjct: 133 DLSHDHWDWEHKLNDNERWFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 192
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLV 181
MENIHSE YSLL++TYIK+ E+ LF+AIE +PC+ +KA WAL WI S FAERLV
Sbjct: 193 MMENIHSETYSLLIDTYIKEQHEREHLFDAIETVPCIKKKADWALRWISDKQSTFAERLV 252
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR+R H
Sbjct: 253 AFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFQHLRRRPHP 312
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V ++ EAV IE +F+ +ALP ALIGMN+ LM QYI+FVADRLLV +
Sbjct: 313 SVVLKIIAEAVAIEQEFLTDALPVALIGMNAPLMCQYIEFVADRLLVSL 361
>gi|363754041|ref|XP_003647236.1| hypothetical protein Ecym_6011 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890873|gb|AET40419.1| hypothetical protein Ecym_6011 [Eremothecium cymbalariae
DBVPG#7215]
Length = 436
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/282 (60%), Positives = 218/282 (77%), Gaps = 2/282 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+LME +RF +FPI+Y +W+ YK+A+ASFWTAEE+DLS+D+ W R+ D+
Sbjct: 105 KELEKDEPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTDN 164
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FIS VLAFFAASDGIV ENL F ++Q+PEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 165 ERYFISRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDT 224
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNA+E IP + +KA+WA+ WI D+ F ERLV FA VEGIFFSGSF A
Sbjct: 225 YIKDPKESEFLFNAVETIPEIKEKAEWAIRWIQDEDALFGERLVAFAAVEGIFFSGSFAA 284
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKK+GLMPGLTFSNELI RDEGLH DFACLL++ LR + + V ++ EAV+IE +
Sbjct: 285 IFWLKKKGLMPGLTFSNELICRDEGLHTDFACLLFAHLRNKPDPKIVERIITEAVDIEKR 344
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ +A+P AL+GMN+ LMSQY++FVADRLLV + F +
Sbjct: 345 YFIDAIPVALLGMNAGLMSQYVEFVADRLLVALGNRKYFNVT 386
>gi|354484403|ref|XP_003504377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Cricetulus griseus]
Length = 354
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 215/276 (77%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ +EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EKH
Sbjct: 31 KSSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKH 90
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 91 FISHVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 150
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA EG FFSGSF AIFW
Sbjct: 151 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAGEGGFFSGSFAAIFW 210
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + +V ++ +AV+IE +F+
Sbjct: 211 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIVDAVQIEQEFLT 270
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 271 EALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 306
>gi|409080029|gb|EKM80390.1| hypothetical protein AGABI1DRAFT_39266 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 396
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/287 (62%), Positives = 218/287 (75%), Gaps = 3/287 (1%)
Query: 13 NQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQH 71
QR G+ + E+QEP+L E +RF +FP++Y ++W YKKAQASFWT EE+DLS D+
Sbjct: 24 TQRFVGDVDLPEEQEPLLKESQRRFVLFPVQYPEIWRYYKKAQASFWTVEEIDLSHDITD 83
Query: 72 WE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W RL E+ FISH+LAFFAASDGIV ENL RF N++Q+ EAR FYGFQI MENIHSE
Sbjct: 84 WAYRLNKDERRFISHILAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSE 143
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGI 189
YSLL++TYIKD E+ LF+A+E IP + +KA WAL WI S SFAERLV FA VEG+
Sbjct: 144 TYSLLIDTYIKDPDERKHLFDAVETIPTIKRKAVWALRWISSRGLSFAERLVAFAAVEGV 203
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSGSF AIFW+KKRGLMPGLTFSNELI+RDEG+H DFACLL++ LR+R H +V ++
Sbjct: 204 FFSGSFAAIFWIKKRGLMPGLTFSNELITRDEGMHTDFACLLFTHLRRRPHPNRVLEIIT 263
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAV IE F +ALP ALIGMNS LM QYI+FVADRLLV + +
Sbjct: 264 EAVAIEKDFFGDALPVALIGMNSKLMCQYIEFVADRLLVSLGNAKYY 310
>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
98AG31]
Length = 385
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/268 (65%), Positives = 212/268 (79%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+EP+L E RF +FPI+Y ++W YK+A+ASFWTAEE+DLS+D+ WE RL D EKHFI
Sbjct: 52 EEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWENRLNDDEKHFI 111
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIV ENL RF ++Q EAR FYGFQI MENIHSE+YSLL++TY+++
Sbjct: 112 KHVLAFFAASDGIVNENLIERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYVREP 171
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ LF+AI+ IPC+ +KA WAL WI S F ERL+ FA VEGIFFSGSF +IFWLK
Sbjct: 172 IERSHLFDAIDTIPCIRKKADWALKWISDKQSTFGERLIAFAAVEGIFFSGSFASIFWLK 231
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLH DFACLL+S L +R H V ++ +AVEIE +F+ +A
Sbjct: 232 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLERRPHPDTVQAIISQAVEIEKEFLSDA 291
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LPC LIGMN+ LM QYI+FVADRLLV +
Sbjct: 292 LPCKLIGMNADLMCQYIEFVADRLLVAL 319
>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
Length = 329
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 214/271 (78%), Gaps = 1/271 (0%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEK 80
E+ EP+L +RF + PI++ +W+MYKKA+ASFWT EEVDL +D+ W +L E+
Sbjct: 5 EEIQAEPLLRANPRRFVILPIQHDAIWKMYKKAEASFWTVEEVDLGRDLVDWNKLNKDEQ 64
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
FI HVLAFFAASDGIV ENL RF+ ++Q+PEAR FYGFQIA+ENIHSEMYS L+ETY+
Sbjct: 65 FFIKHVLAFFAASDGIVNENLVERFMTEVQLPEARCFYGFQIAIENIHSEMYSRLIETYV 124
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIF 199
DS EK LFNAIE +P V +KA+WA+ WI H SF ER+V FA VEGIFFSGSF AIF
Sbjct: 125 NDSAEKDSLFNAIETLPAVRRKAEWAMRWISHDKASFGERVVAFAAVEGIFFSGSFAAIF 184
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACL++S+L+KR ++V ++ +AVEIE F+
Sbjct: 185 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFSMLKKRPSKERVTGIIMDAVEIEQDFL 244
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALPC L+GMN++LM QYI+FV+DRLLV +
Sbjct: 245 TNALPCGLLGMNATLMKQYIEFVSDRLLVAL 275
>gi|346465789|gb|AEO32739.1| hypothetical protein [Amblyomma maculatum]
Length = 395
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 214/268 (79%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y+ +W MYKKA+ASFWT EEVDL++D+ HWE L E+HFI
Sbjct: 74 EDEPLLRENPRRFVIFPIEYEDIWRMYKKAEASFWTVEEVDLAKDLPHWESLKPDERHFI 133
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SH+LAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+EN+HSEMYSLL++TYIKD
Sbjct: 134 SHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYIKDP 193
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ +LFNAIE +PC+ +KA WAL WI + SF ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 194 AEREQLFNAIETMPCIKRKADWALRWIGDRNASFGERVVAFAAVEGIFFSGSFASIFWLK 253
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLH DFACL++S L + ++V +V +AV IE +F+ EA
Sbjct: 254 KRGLMPGLTFSNELISRDEGLHTDFACLMFSHLVHKPSAERVKQIVCDAVVIEQEFLTEA 313
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP ALIGMN LM +YI+FVADRLLV +
Sbjct: 314 LPVALIGMNCELMKRYIEFVADRLLVEL 341
>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 379
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/272 (64%), Positives = 214/272 (78%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP L+E RF +FPI+ +VW+MYKKA+ASFWTAEE+DL D++ W +L D+E+HFI H
Sbjct: 60 EPFLVENPNRFVLFPIQEHEVWQMYKKAEASFWTAEELDLVHDLKDWSKLTDNERHFIKH 119
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F N++Q+PEAR FYGFQIA+ENIHSE+YSLL++TYIKD+ E
Sbjct: 120 VLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKDAIE 179
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K L AIE IPCV +KA WA+ W S+ ERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 180 KDHLLRAIETIPCVTKKAHWAIKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWLKKR 239
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL+FSNELISRDEG+H DFACLLYS L +L +VH +V +AV IE +FV ++LP
Sbjct: 240 GLMPGLSFSNELISRDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHEFVRDSLP 299
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMNS LM QYI+FVADRLL + ++
Sbjct: 300 VELIGMNSGLMCQYIEFVADRLLYSLGVSKIY 331
>gi|404450556|ref|ZP_11015537.1| ribonucleotide reductase subunit beta [Indibacter alkaliphilus LW1]
gi|403763776|gb|EJZ24719.1| ribonucleotide reductase subunit beta [Indibacter alkaliphilus LW1]
Length = 326
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 215/266 (80%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD++ W+ L D E+HFISH
Sbjct: 5 EPILQENSGRFVLFPIQHDDIWQYYKKAEASFWTAEEIDLSQDLKDWKNLNDGERHFISH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F++++Q EA+ FYGFQIAMENIHSE YSLL++TYIKD+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDNVE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ +L NAIE+I CV +KA WAL WI + +F ERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKADWALRWIDNG-TFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLHCDFAC LY+ + L + V ++ AVEIE +FV +ALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTKHVNNTLPKETVTEIIKNAVEIEKEFVTDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS LM QYI+FVADRLLV +
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVEL 269
>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
Length = 426
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/279 (62%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E +EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DL +D W E+L ++E++
Sbjct: 99 EKEEPLLIENTRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNEKLNNNERY 158
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS +LAFFAASDGIV ENL F ++Q+PEA+ FYGFQI MENIHSE YSLL++TYIK
Sbjct: 159 FISRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIK 218
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAI+NIPC+ +KA WAL WI+ D+ F ERLV FA VEGIFFSGSF +IFW
Sbjct: 219 DPKEADFLFNAIDNIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFW 278
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL+S L+ R V ++ EAV IE +F
Sbjct: 279 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPDAVIVERIITEAVTIEKEFFV 338
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN +LM QY++FVADRLLV + ++ +
Sbjct: 339 DALPISLLGMNCNLMCQYVEFVADRLLVALGNKKVYNVT 377
>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
WM276]
Length = 401
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/271 (63%), Positives = 217/271 (80%), Gaps = 2/271 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E EP+L E N RF +FPI+Y ++W+MYKKAQASFWTAEE++L+ D+ WE +L D+E+
Sbjct: 70 EEKDEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNER 129
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+FI HVLAFFAASDGIV ENL RF ++Q EA++FYGFQI MENIH+E YSLL++TYI
Sbjct: 130 YFIEHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYI 189
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD+ ++ LF+A++ IPC+ +KA WAL WI S F ERL+ FA VEGIFFSGSF +IF
Sbjct: 190 KDTARRNFLFDAMDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIF 249
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DFACLL++ LR+R H + ++ EAV IE +F+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIARIIKEAVSIEQEFL 309
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 310 TDALPVSLIGMNAKLMCQYIEFVADRLLVAL 340
>gi|345498175|ref|XP_003428168.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Nasonia vitripennis]
Length = 372
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/263 (65%), Positives = 214/263 (81%), Gaps = 1/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF +FPI++ +W MYKKA+ASFWT EEVDLS+D+ W RL D+E+HFISH
Sbjct: 51 EPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADWNRLNDNERHFISH 110
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+A+ENIHSEMYSLL++TYI D+ +
Sbjct: 111 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQ 170
Query: 146 KHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCVA+KA WAL+WI H S +FAER++ FA VEGIFFSGSF AIFWLKKR
Sbjct: 171 RQFLFNAIETLPCVAKKANWALNWISHDSATFAERVIAFAAVEGIFFSGSFAAIFWLKKR 230
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ + ++ ++V ++ +AV IE +F+ +ALP
Sbjct: 231 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSEERVISIIKDAVTIEQEFLTDALP 290
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+IGMN LM QYI+FVADRLL
Sbjct: 291 VEMIGMNCRLMCQYIEFVADRLL 313
>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
[Aspergillus nidulans FGSC A4]
Length = 406
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/276 (63%), Positives = 217/276 (78%), Gaps = 2/276 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL + E++
Sbjct: 71 EANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERY 130
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL RF ++QIPEAR FYGFQI +ENIH+E YSLL++TYIK
Sbjct: 131 FISRVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIK 190
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
+ K++ LF+AI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF +IFW
Sbjct: 191 EPKQRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFW 250
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + V ++ EAV IE +F+
Sbjct: 251 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLT 310
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ALPCAL+GMN+ LM QYI+FVADRLLV + F
Sbjct: 311 DALPCALLGMNAKLMCQYIEFVADRLLVALGNKKYF 346
>gi|388857936|emb|CCF48381.1| probable small subunit of ribonucleotide reductase [Ustilago
hordei]
Length = 421
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/259 (66%), Positives = 215/259 (83%), Gaps = 2/259 (0%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAA 92
+RF +FPIR+ ++W+MYKKA+ASFWTAEE+DLS+D+ W+ +L D+E+HFISHVLAFFAA
Sbjct: 99 RRFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAA 158
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
SDGIV ENL RF +++Q EAR FYGFQI MENIHSE YSLL++TYI++ +++ LF+A
Sbjct: 159 SDGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREFLFDA 218
Query: 153 IENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLT 211
+E IP V +KA+WAL WI+ +FAERLV FA VEGIFFSGSF +IFWLKKRGLMPGLT
Sbjct: 219 VETIPVVKKKAEWALRWINDRKATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLT 278
Query: 212 FSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
FSNELISRDEGLH DFACLL+S L+KR H V ++ EAVEIE +F+ +++PCA+IGMN
Sbjct: 279 FSNELISRDEGLHTDFACLLFSHLKKRAHPDTVLKIISEAVEIEIEFLTQSIPCAMIGMN 338
Query: 272 SSLMSQYIKFVADRLLVHI 290
+LMSQYI FVADRLL +
Sbjct: 339 QTLMSQYITFVADRLLTQL 357
>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii GT1]
Length = 391
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 219/270 (81%)
Query: 27 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHV 86
P+LM R+ + PI++ +WEMYKK +ASFWTAEE+DL+QD+ HWE L ++EKHFI +V
Sbjct: 74 PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWETLGENEKHFIKYV 133
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIVLENLA +FL +IQ+PEARAFYGFQIAMENIHSE YSLL++ YI+D +EK
Sbjct: 134 LAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEK 193
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
+LF+A+ N+ VA KA WA WI++ + FAERLVGFACVEGI FSGSFCAIFWLKKRGL
Sbjct: 194 LQLFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCAIFWLKKRGL 253
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
MPGLTFSNELISRDEGLH DFACLLYS L+ +L + V MV EAV +E F+CEALP
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPDKVVQDMVREAVTVERAFICEALPVD 313
Query: 267 LIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN+ M+QYI+FVADRLL + +F
Sbjct: 314 LIGMNNRSMAQYIEFVADRLLTSLGVPKIF 343
>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
Length = 337
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 221/276 (80%), Gaps = 3/276 (1%)
Query: 18 GEQEQ--EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
EQE+ +DQEP+L+ +RF +FPI Y ++ MYK+A AS WT EEVDLS+D++HW L
Sbjct: 5 SEQEEFSDDQEPLLVSNPRRFVLFPIEYPDIFTMYKQALASIWTVEEVDLSKDIKHWNIL 64
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
EK FISHVLAFFAASDGIV ENL RF ++Q+ EAR+FYG QIA+ENIHSEMYSLL
Sbjct: 65 NSDEKRFISHVLAFFAASDGIVNENLVQRFSVEVQVSEARSFYGLQIAVENIHSEMYSLL 124
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGS 194
++TYI D +EK ++F+AIE +P V +KA WA+ WI S++S F+ERLV FA VEGIFFSGS
Sbjct: 125 IDTYISDFQEKDKMFSAIETMPFVKKKADWAIRWIESTESHFSERLVAFAAVEGIFFSGS 184
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F +IFWLKKRG+MPGLT+SNELISRDEGLH DFACLLY L+K+L ++ ++ EAV +
Sbjct: 185 FASIFWLKKRGVMPGLTYSNELISRDEGLHTDFACLLYHHLKKKLPRDRILQIITEAVVL 244
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+ EALP ALIGMN +LMSQYI+FVADRL++ +
Sbjct: 245 EKEFLTEALPVALIGMNVNLMSQYIEFVADRLIIEL 280
>gi|395217260|ref|ZP_10401555.1| ribonucleoside-diphosphate reductase [Pontibacter sp. BAB1700]
gi|394455057|gb|EJF09607.1| ribonucleoside-diphosphate reductase [Pontibacter sp. BAB1700]
Length = 295
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/242 (71%), Positives = 203/242 (83%), Gaps = 1/242 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEE+DLSQD + WE L D E+HFISHVLAFFAASDGIV ENLA F+ +
Sbjct: 1 MYKKAEASFWTAEEIDLSQDQKDWENLNDGERHFISHVLAFFAASDGIVNENLAINFMQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+Q+PEAR FYGFQI MENIHSE YSLL++TYIK EK LFNA+E +PCV +K +WAL
Sbjct: 61 VQLPEARCFYGFQIMMENIHSETYSLLIDTYIKKQSEKDYLFNALETVPCVKKKGEWALK 120
Query: 169 WIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 228
WI+ S+ F ERL+ FA VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIN-SEKFVERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 179
Query: 229 CLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
CLLYS+L +L +VH ++ +AVEIE +FV +ALP LIGMN+ LMSQYI+FVADRLLV
Sbjct: 180 CLLYSMLNNKLPESRVHEIIRDAVEIEQEFVTDALPVDLIGMNAKLMSQYIEFVADRLLV 239
Query: 289 HI 290
+
Sbjct: 240 SL 241
>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
Length = 406
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/276 (63%), Positives = 217/276 (78%), Gaps = 2/276 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+L E RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL + E++
Sbjct: 71 EANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERY 130
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL RF ++QIPEAR FYGFQI +ENIH+E YSLL++TYIK
Sbjct: 131 FISRVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIK 190
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
+ K++ LF+AI+ IPC+ +KA WA+ WI +S FA+RLV FA VEGIFFSGSF +IFW
Sbjct: 191 EPKQRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFW 250
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R + V ++ EAV IE +F+
Sbjct: 251 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLT 310
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ALPCAL+GMN+ LM QYI+FVADRLLV + F
Sbjct: 311 DALPCALLGMNAKLMCQYIEFVADRLLVALGNKEYF 346
>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii VEG]
Length = 391
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 219/270 (81%)
Query: 27 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHV 86
P+LM R+ + PI++ +WEMYKK +ASFWTAEE+DL+QD+ HWE L ++EKHFI +V
Sbjct: 74 PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWETLGENEKHFIKYV 133
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIVLENLA +FL +IQ+PEARAFYGFQIAMENIHSE YSLL++ YI+D +EK
Sbjct: 134 LAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEK 193
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
+LF+A+ N+ VA KA WA WI++ + FAERLVGFACVEGI FSGSFCAIFWLKKRGL
Sbjct: 194 LQLFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCAIFWLKKRGL 253
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
MPGLTFSNELISRDEGLH DFACLLYS L+ +L + V MV EAV +E F+CEALP
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPDKVVQDMVREAVTVERAFICEALPVD 313
Query: 267 LIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN+ M+QYI+FVADRLL + +F
Sbjct: 314 LIGMNNRSMAQYIEFVADRLLTSLGVPKIF 343
>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Komagataella pastoris GS115]
gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Komagataella pastoris GS115]
gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Komagataella
pastoris CBS 7435]
Length = 400
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/281 (62%), Positives = 217/281 (77%), Gaps = 2/281 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L+E +RF +FP++Y +W+MYK+A+ASFWTAEE+DL +D+ W R+ D+
Sbjct: 70 KEMEKDEPLLVENKRRFVLFPLKYHDIWQMYKQAEASFWTAEEIDLGKDLHDWNNRMNDN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FIS VLAFFAASDGIV ENL F ++Q+PEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 130 EKFFISRVLAFFAASDGIVNENLVENFSAEVQLPEAKCFYGFQIMMENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIE IPC+ +KA WA+ WI D+ FAERLV FA VEGIFFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIETIPCIKEKADWAMRWISDDDALFAERLVAFAAVEGIFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL+S L R + V ++ EAVEIE +
Sbjct: 250 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNRASEEIVEKIITEAVEIEKR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
+ +ALP +L+GMN SLM QY++FVADRLLV + ++ +
Sbjct: 310 YFTDALPVSLLGMNCSLMCQYVEFVADRLLVALGNKKVYNV 350
>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 320
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 213/260 (81%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
IL +++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D++ +E+L ++EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKHVL 63
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIHSE YSLL++ YIKD KE+
Sbjct: 64 AFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCAL 267
GLTFSNELISRDEGLH DF CL+YSLL +L Q V ++V EAVE+E F+CE+LPC L
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPCDL 243
Query: 268 IGMNSSLMSQYIKFVADRLL 287
IGMNS LMSQYI+FVADRLL
Sbjct: 244 IGMNSRLMSQYIEFVADRLL 263
>gi|354546840|emb|CCE43572.1| hypothetical protein CPAR2_212160 [Candida parapsilosis]
Length = 422
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/279 (63%), Positives = 217/279 (77%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E +EP+L E +R+ MFPIRY ++W+MYKKA+ASFWTAEE+DL +D+ W E+L D+E+
Sbjct: 96 EAEEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDLHDWREKLNDNERF 155
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +LAFFAASDGIV ENL F ++QIPEA++FYGFQI MENIHSE YSLL+ETYIK
Sbjct: 156 FIGRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIETYIK 215
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAIE IP + +KA WA+ WI SD+ FAERLV FA VEGIFFSGSF +IFW
Sbjct: 216 DPKEADFLFNAIETIPQIKKKADWAIRWIQDSDALFAERLVAFAAVEGIFFSGSFASIFW 275
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ R + V ++ EAVEIE +F
Sbjct: 276 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQHRPDPKIVERIITEAVEIEKEFFT 335
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN LM QY++FVADRLLV + ++ +
Sbjct: 336 DALPVSLLGMNCKLMCQYVEFVADRLLVALGNKKVYNVT 374
>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii
17XNL]
gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
Length = 349
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 215/269 (79%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++ +E E IL +++ RF + PI Y +VW YKKA+ASFWTAEE+DLS D++ +E+L +
Sbjct: 24 QKSKESNEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVN 83
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFI HVLAFFAASDGIVLENLA++FL +++I EA+ FY FQIA+ENIHSE YSLL++
Sbjct: 84 EKHFIKHVLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDN 143
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD KE+ LF+AIENIP + KA WA WI+ ++SFAER+V ACVEGI FSGSFCAI
Sbjct: 144 YIKDEKERLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAI 203
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L V ++V EAVE+E F
Sbjct: 204 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSF 263
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 264 ICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>gi|325559284|gb|ADZ30659.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L +EKHFI H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++Q+ EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERLV FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLVAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLI 277
>gi|348665308|gb|EGZ05139.1| hypothetical protein PHYSODRAFT_348632 [Phytophthora sojae]
gi|348675010|gb|EGZ14828.1| hypothetical protein PHYSODRAFT_560974 [Phytophthora sojae]
Length = 386
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/301 (59%), Positives = 227/301 (75%), Gaps = 7/301 (2%)
Query: 5 KNETENEVNQREQGEQEQED------QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFW 58
K++ E E + E E ++++ EP L+ RF +FPI+ VW+MYKKA+ASFW
Sbjct: 40 KSQEEEEQPKLEMSEYKRKEVNGELQPEPYLVSNPNRFVLFPIQEHDVWQMYKKAEASFW 99
Query: 59 TAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFY 118
TAEE+DL D+ W++L D+E+ FI HVLAFFAASDGIV ENLA F N++Q+P+AR FY
Sbjct: 100 TAEELDLVHDLNDWQKLTDNERFFIKHVLAFFAASDGIVNENLAMNFSNEVQVPKARCFY 159
Query: 119 GFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFA 177
GFQIA+ENIH+E+YSLL++TYIKD+ EK+ L AIE IPCV +KA WAL W S+
Sbjct: 160 GFQIAIENIHAEVYSLLIDTYIKDTMEKNHLLRAIETIPCVKKKAHWALKWCDPRVSSYP 219
Query: 178 ERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK 237
ERL+ FA VEGIFFSGSFC+IFWLKKRGLMPGL+FSNELISR+EG+H DFACL+YS L
Sbjct: 220 ERLLAFAAVEGIFFSGSFCSIFWLKKRGLMPGLSFSNELISRNEGMHTDFACLMYSKLVN 279
Query: 238 RLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFI 297
+L +VH +V EAV IE +FVC++LP LIGMNS+LM QYI+FVADRLL + L+
Sbjct: 280 KLPESRVHEIVREAVTIEHEFVCDSLPVELIGMNSTLMCQYIEFVADRLLYSLGVPKLYN 339
Query: 298 I 298
+
Sbjct: 340 V 340
>gi|390442956|ref|ZP_10230755.1| ribonucleotide reductase [Nitritalea halalkaliphila LW7]
gi|389667264|gb|EIM78687.1| ribonucleotide reductase [Nitritalea halalkaliphila LW7]
Length = 326
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 217/269 (80%), Gaps = 2/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
++QEPIL + RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD+ W+ L D E+HF
Sbjct: 2 QNQEPILQDNGNRFVLFPIQHNDIWQFYKKAEASFWTAEEIDLSQDLNDWKNLTDGERHF 61
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
ISH+LAFFAASDGIV ENLA F++++Q EA+ FYGFQIAMENIHSE YSLL++TYIK+
Sbjct: 62 ISHILAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKN 121
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
++E+ L NAIE IPCV +KA WAL WI + SF ERL+ FA VEGIFFSGSFC++FWLK
Sbjct: 122 AQERDYLLNAIETIPCVQKKADWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSLFWLK 180
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCE 261
KRGLMPGLTFSNELISRDEGLHCDFAC LY+ + +L + V ++ +AV IE +FV +
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCDFACHLYTKHVVNQLPKETVKKIIMDAVAIEKEFVTD 240
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALP LIGMN+ LM QYI+FVADRLL+ +
Sbjct: 241 ALPVRLIGMNADLMCQYIEFVADRLLLEL 269
>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
chain); putative [Variola major virus]
gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
Length = 333
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 205/262 (78%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S S+ ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YIKFVADRL+
Sbjct: 256 KLIGMNCEMMKTYIKFVADRLI 277
>gi|406603358|emb|CCH45150.1| Ribonucleoside-diphosphate reductase small chain [Wickerhamomyces
ciferrii]
Length = 421
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/282 (61%), Positives = 218/282 (77%), Gaps = 2/282 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+EQE EP+L+E +RF +FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D+ W ERL D+
Sbjct: 91 KEQEKDEPLLVENKRRFVLFPIKYHEIWQAYKKAEASFWTAEEIDLSKDIHDWNERLNDN 150
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 151 ERFFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDT 210
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD K+ LFNAIE IPC+ +KA WAL WI ++ F ERLV FA VEGIFFSGSF +
Sbjct: 211 YIKDPKQAEYLFNAIETIPCIKEKADWALRWIADEEALFGERLVAFAAVEGIFFSGSFAS 270
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + + V ++ EAV IE++
Sbjct: 271 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPSEEIVEKIITEAVSIESE 330
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ +ALP +L+GMN+ LM QY++F ADRLLV + + +
Sbjct: 331 YFTDALPASLLGMNAKLMCQYVEFCADRLLVALGNKKFYNVT 372
>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
Indica Group]
Length = 233
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/233 (74%), Positives = 198/233 (84%), Gaps = 1/233 (0%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHFISHVLAFFAASDGI 96
MFPIRY Q+WE YKKA ASFWTAEEVDLS D +HW+ L E+HF+SHVLAFFAASDGI
Sbjct: 1 MFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFVSHVLAFFAASDGI 60
Query: 97 VLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENI 156
VLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D EK RLF AI+ +
Sbjct: 61 VLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDRLFRAIDTV 120
Query: 157 PCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 216
P V +KA WA+ WI + FAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL
Sbjct: 121 PAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 180
Query: 217 ISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIG 269
ISRDEGLHCDFACLLY LLR +L +V +V +AV+IE +FVC+ALP AL+G
Sbjct: 181 ISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDALPVALVG 233
>gi|348588881|ref|XP_003480193.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Cavia porcellus]
Length = 351
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 215/273 (78%), Gaps = 1/273 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FIS
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPEEKYFIS 90
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI++ +
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIREPE 150
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
++ LFNAIE +P V +KA WAL WI S F ER+V FA VEG+FFSGSF AIFWLKK
Sbjct: 151 QRDFLFNAIETMPFVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGL+PGLTFSNELISRDEGLHCDFACL++ L + +V ++ +AV IE +F+ EAL
Sbjct: 211 RGLLPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSAARVREIIVDAVRIEQEFLTEAL 270
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
P LIGMN LM QYI+FVADRLLV + +F
Sbjct: 271 PVGLIGMNCELMKQYIEFVADRLLVELGFSKVF 303
>gi|403371741|gb|EJY85755.1| Ribonucleoside-diphosphate reductase small chain [Oxytricha
trifallax]
Length = 379
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 205/262 (78%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF + PI+Y +W+MYK A+FWT+EE+DL+ DV+ WERL D+E+HFI H
Sbjct: 61 EPLLEDNPNRFVILPIKYNDIWKMYKDQMAAFWTSEEIDLATDVKDWERLNDNERHFIKH 120
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF +IQ+PEAR FYGFQ+ MENIHSE YS+L++T I D E
Sbjct: 121 VLAFFAASDGIVNENLAQRFCTEIQVPEARCFYGFQMMMENIHSETYSVLIDTLISDPHE 180
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LF AI NIP V +KA+WA+ WI S SFAERL+ FA +EGIFFSGSFC+IFWLKKRG
Sbjct: 181 KEFLFKAITNIPVVTKKAEWAIKWIGESASFAERLIAFAAIEGIFFSGSFCSIFWLKKRG 240
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEG+H DFACLLY L +L +++ ++ AV IE +FV ++LP
Sbjct: 241 LMPGLTFSNELISRDEGMHTDFACLLYKHLNNKLSNERILEIITNAVGIELEFVSDSLPV 300
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMNS LM QYI FVADRLL
Sbjct: 301 ELIGMNSKLMGQYIMFVADRLL 322
>gi|3914644|sp|O46310.1|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase M2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 345
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 168/270 (62%), Positives = 217/270 (80%), Gaps = 1/270 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D E+HFI
Sbjct: 23 EEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFI 82
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+TYI DS
Sbjct: 83 KHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDS 142
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RL +AI+ IPC+ +KA+W + WI SS SF +RL+GFA VEGIFFSGSFCA+FWLKK
Sbjct: 143 EEKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKK 202
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE +F+C+A
Sbjct: 203 RGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDA 262
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
LP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 263 LPVRLIGMNAELMAQYIEFVADRLLVSLGE 292
>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
chabaudi]
gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 349
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 216/269 (80%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++ +E E IL +++ RF + PI Y +VW YKKA+ASFWTAEE+DLS D++ +E+L +
Sbjct: 24 QKNKECNEKILNKESSRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVN 83
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EKHFI HVLAFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIHSE YSLL++
Sbjct: 84 EKHFIKHVLAFFAASDGIVLENLASKFLREVQIIEAKKFYAFQIAVENIHSETYSLLIDN 143
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YI+D KE+ LF+AIENIP + KA WA WI+ ++SFAER+V ACVEGI FSGSFCAI
Sbjct: 144 YIRDEKERLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAI 203
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L + V ++V EAVE+E F
Sbjct: 204 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSF 263
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 264 ICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>gi|441498220|ref|ZP_20980420.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Fulvivirga imtechensis AK7]
gi|441438008|gb|ELR71352.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Fulvivirga imtechensis AK7]
Length = 331
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 211/263 (80%), Gaps = 2/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD++ W + D E+HFISH
Sbjct: 10 EPILKENKNRFVLFPIKHDDIWQFYKKAEASFWTAEEIDLSQDLKDWNNMSDGERHFISH 69
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIA+ENIHSE YSLL++TY+KD E
Sbjct: 70 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAIENIHSETYSLLIDTYVKDPNE 129
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K +LFNAIE + CV +KA WAL WI SF ERLV FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 KDKLFNAIETMDCVKKKADWALRWIDEG-SFQERLVAFAAVEGIFFSGSFCSIFWLKKRG 188
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGL+FSNELISRDEGLHCDFACLLY+ + +L + + ++ +AV IE +FV +ALP
Sbjct: 189 LMPGLSFSNELISRDEGLHCDFACLLYNNHVINKLPQETIISIIKDAVSIEKEFVTDALP 248
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+LIGMN+ LM QYI+FVADRLL
Sbjct: 249 VSLIGMNADLMCQYIEFVADRLL 271
>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 422
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/295 (59%), Positives = 225/295 (76%), Gaps = 6/295 (2%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L E +R+ MFPIRY ++W+MYKKA+ASFWTAEE+DL +D+ W+ +L ++
Sbjct: 93 KEAEKDEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDMHDWKNKLNEN 152
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS +LAFFAASDGIV ENL F ++QIPEA++FYGFQI MENIHSE YSLL++T
Sbjct: 153 ERFFISRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIDT 212
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI+NIP + +KA WA+ WI+ ++ FAERLV FA VEG+FFSGSF +
Sbjct: 213 YIKDPKEADFLFNAIDNIPQIKKKADWAIRWINDDNALFAERLVAFAAVEGVFFSGSFAS 272
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL+S L R + V ++ EAVEIE +
Sbjct: 273 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLENRPDPKIVEKIISEAVEIEKE 332
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIAC----VKGIARAG 308
F +ALP +L+GMN LM QY++FVADRLLV + ++ + ++ I+ AG
Sbjct: 333 FFTDALPVSLLGMNCKLMCQYVEFVADRLLVALGNEKIYKVTNPFDFMENISLAG 387
>gi|325558213|gb|ADZ29593.1| ribonucleotide reductase small subunit protein [Cowpox virus]
gi|325558859|gb|ADZ30236.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLI 277
>gi|389747382|gb|EIM88561.1| hypothetical protein STEHIDRAFT_54000 [Stereum hirsutum FP-91666
SS1]
Length = 382
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 217/270 (80%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E++EP+L+E +RF +FPI+Y ++W MYKKA+ASFWTAEE+D+S+D+ W RL D+E++
Sbjct: 34 EEREPLLIESKRRFVLFPIQYHEIWRMYKKAEASFWTAEEIDMSKDLMDWNHRLNDNERY 93
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF N++Q EAR FYGFQI MENIHSE YS L+ +YI
Sbjct: 94 FISHILAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSQLINSYIA 153
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFW 200
D +E+ LF+AIE IPCV +KA WAL WI SFAERLV FA VEGIFFSGSF +IFW
Sbjct: 154 DPEEREFLFDAIETIPCVKRKADWALRWIEDRRSSFAERLVAFAAVEGIFFSGSFASIFW 213
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+ L++R H + V ++ EAV IE +F+
Sbjct: 214 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFGHLKRRPHPEVVSIIISEAVAIEQEFLT 273
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP LIGMN++LM QYI+FVADRLLV +
Sbjct: 274 DALPVGLIGMNAALMCQYIEFVADRLLVAL 303
>gi|348688371|gb|EGZ28185.1| hypothetical protein PHYSODRAFT_321864 [Phytophthora sojae]
gi|348688372|gb|EGZ28186.1| hypothetical protein PHYSODRAFT_284208 [Phytophthora sojae]
Length = 384
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/272 (64%), Positives = 212/272 (77%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP L+E RF +FPI+ VW+MYKKA+ASFWTAEE+DL D++ W L D+E+ FI H
Sbjct: 65 EPFLVENPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLKDWANLTDNERFFIKH 124
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F N++Q+PEAR FYGFQIA+ENIHSE+YSLL++TYIKD+ E
Sbjct: 125 VLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKDAVE 184
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K L AIE IPCV +KA WAL W S+ ERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 185 KDHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWLKKR 244
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL+FSNELISRDEG+H DFACL+YS L +L +VH +V +AV IE +FV ++LP
Sbjct: 245 GLMPGLSFSNELISRDEGMHTDFACLMYSKLVNKLPESRVHEIVRDAVTIEHEFVRDSLP 304
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMNSSLM QYI+FVADRLL + ++
Sbjct: 305 VELIGMNSSLMCQYIEFVADRLLYSLGVSKIY 336
>gi|440475735|gb|ELQ44398.1| ribonucleoside-diphosphate reductase subunit M2 B [Magnaporthe
oryzae Y34]
gi|440486447|gb|ELQ66310.1| ribonucleoside-diphosphate reductase subunit M2 B [Magnaporthe
oryzae P131]
Length = 403
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 215/276 (77%), Gaps = 11/276 (3%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EPIL E QRF VW+MYKKA+ASFWTAEE+DLS+D+ W +L D EK+
Sbjct: 71 EMDEPILQENPQRF---------VWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKY 121
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++TYIK
Sbjct: 122 FISHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIK 181
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
++ ++ LFNAI+ IPC+ +KA WAL WI S FA RL+ FA VEGIFFSG+F +IFW
Sbjct: 182 ETAQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFW 241
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLH DFACLL+SLL R + + V +V +AV+IE +F+
Sbjct: 242 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFSLLNNRPNKEVVKEIVVDAVKIEQEFLT 301
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALPCAL+GMN++LM QYI+FVADRLLV + ++
Sbjct: 302 EALPCALLGMNANLMKQYIEFVADRLLVALGNEKVY 337
>gi|325559071|gb|ADZ30447.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L +EKHFI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|358333482|dbj|GAA27391.2| ribonucleoside-diphosphate reductase subunit M2 [Clonorchis
sinensis]
Length = 492
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 210/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L RF +FPI+Y VW+ YKKA ASFWT EEVDLS+D W L E+HFIS+
Sbjct: 170 EPLLKPNPHRFVLFPIQYHDVWQFYKKAVASFWTVEEVDLSKDFSDWNSLKVGERHFISY 229
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIVLENL RF ++Q+PE R FYG QIA+ENIHSEMYSLL++TYIKD E
Sbjct: 230 VLAFFAASDGIVLENLVERFSQEVQVPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDPTE 289
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAI N+ CVAQKA+WAL+WI + S FAER+V FA VEGIFFSGSF AIFWLKKR
Sbjct: 290 RDFLFNAISNLECVAQKAQWALNWIGDTHSTFAERIVAFAAVEGIFFSGSFAAIFWLKKR 349
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLY + ++ +V ++ EAVEIE +F+ +ALP
Sbjct: 350 GLMPGLTFSNELISRDEGLHCDFACLLYKYIVQKPAKDRVLAIIKEAVEIEQKFLSDALP 409
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+LIGMN LM +YI+F+ADRLLV +
Sbjct: 410 VSLIGMNCKLMCRYIEFIADRLLVEL 435
>gi|379729068|ref|YP_005321264.1| ribonucleoside-diphosphate reductase small chain [Saprospira
grandis str. Lewin]
gi|378574679|gb|AFC23680.1| ribonucleoside-diphosphate reductase small chain [Saprospira
grandis str. Lewin]
Length = 323
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 217/271 (80%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E +QRF +FPI++ +WEM K+A A FWT +E+DL+ D+ W++L +E+HFI H
Sbjct: 5 EPILQENDQRFVLFPIQHDAIWEMRKQALACFWTTDEIDLAADLHDWKKLSANEQHFIKH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL F D+Q+ EAR+FY QI +E+IH+E YSLL++TYI+DS E
Sbjct: 65 VLAFFAASDGIVNENLVLNFYRDVQLAEARSFYATQIQIEDIHAETYSLLIDTYIQDSAE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNA++ +PCV +KAKWA+ WI + SFA RLV FA VEGIFFSGSFC+I+WLKKRG
Sbjct: 125 KNALFNAMQTLPCVQRKAKWAIKWIEEAPSFAHRLVAFAAVEGIFFSGSFCSIYWLKKRG 184
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
+MPGLTFSNELISRDEG+HCDFACLLYS+L + +++ ++ EAV +E +FV +ALP
Sbjct: 185 IMPGLTFSNELISRDEGMHCDFACLLYSMLENPIPSEELRSIITEAVSLEQEFVTDALPV 244
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+LIGMN+ LMSQYI+FVADRLLV + Q ++
Sbjct: 245 SLIGMNAKLMSQYIEFVADRLLVSLGQPKVY 275
>gi|448513504|ref|XP_003866973.1| Rnr21 ribonucleoside-diphosphate reductase [Candida orthopsilosis
Co 90-125]
gi|380351311|emb|CCG21535.1| Rnr21 ribonucleoside-diphosphate reductase [Candida orthopsilosis
Co 90-125]
Length = 422
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/279 (62%), Positives = 217/279 (77%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E +EP+L E +R+ MFPIRY ++W+MYKKA+ASFWTAEE+DL +D+ W E+L D+E+
Sbjct: 96 EAEEPLLKENTRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDLHDWREKLNDNERF 155
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +LAFFAASDGIV ENL F ++QIPEA++FYGFQI MENIHSE YSLL+ETYIK
Sbjct: 156 FIGRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIETYIK 215
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAIE IP + +KA WA+ WI S++ FAERLV FA VEGIFFSGSF +IFW
Sbjct: 216 DPKEADFLFNAIETIPQIKKKADWAIRWIQDSEALFAERLVAFAAVEGIFFSGSFASIFW 275
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ R + V ++ EAVEIE +F
Sbjct: 276 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQHRPDPKIVERIITEAVEIEKEFFT 335
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN LM QY++FVADRLLV + ++ +
Sbjct: 336 DALPVSLLGMNCKLMCQYVEFVADRLLVALGNKKVYNVT 374
>gi|395328928|gb|EJF61318.1| beta subunit of ribonucleotide reductase [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 215/268 (80%), Gaps = 2/268 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+L E +RF +FPI+Y ++W+MYK+AQASFW+ EE++LS D+ W +L D+E+H
Sbjct: 70 EHLEPLLTETTRRFVLFPIQYNEIWQMYKQAQASFWSVEEINLSHDLWDWNYKLTDNERH 129
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F+S+VLAFFAASDGIV ENL RF N++Q EAR FYGFQI +EN+HSE YSLL++TYIK
Sbjct: 130 FLSYVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMIENVHSETYSLLIDTYIK 189
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D E+ LF+AIE +PC+ +KA WAL WI S FAERLV FA VEGIFFSGSF +IFW
Sbjct: 190 DPAERKFLFDAIETVPCIKKKADWALRWIADERSVFAERLVAFAAVEGIFFSGSFASIFW 249
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR+R H +V ++ EAVEIE +F+
Sbjct: 250 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFHHLRRRPHPARVVKIITEAVEIEKEFLS 309
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLV 288
EALP +LIG+N+ LM QYI+FVADRLLV
Sbjct: 310 EALPVSLIGINAQLMCQYIEFVADRLLV 337
>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
Length = 406
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF + PI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FIS+
Sbjct: 87 EPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEERYFISY 146
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ E R FYGFQIAMENIHSEMYSLL++TYIKD KE
Sbjct: 147 VLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 206
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA+W+L WI ++ + ERLV FA VEGIFFSGSF +IFWLKKR
Sbjct: 207 REFLFNAIETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIFWLKKR 266
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACLL+ + + Q+V ++ +AV+IE +F+ EALP
Sbjct: 267 GLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFLIEALP 326
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN +LM QYI+FVADRLL+ +
Sbjct: 327 VELIGMNCTLMKQYIEFVADRLLLEL 352
>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 463
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 169/282 (59%), Positives = 223/282 (79%), Gaps = 1/282 (0%)
Query: 11 EVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQ 70
++N + ++ E +E +L RF +FPI+Y+ +W+ YKKAQASFWT EEVDL +D+
Sbjct: 128 KINLTQATTKDLEAEETLLKPNIDRFVVFPIKYQDIWKYYKKAQASFWTVEEVDLGKDLP 187
Query: 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W +L + E+ FISHVLAFFAASDGIVLENL RF ++Q+ EAR FYGFQIAMEN+HSE
Sbjct: 188 DWVKLKEEERRFISHVLAFFAASDGIVLENLVQRFSQEVQVAEARCFYGFQIAMENVHSE 247
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGI 189
MYSLL++ YIK+ +EK RLF+AI+N+PCV +KA WA++WI S + SF ERLV FA VEGI
Sbjct: 248 MYSLLIDAYIKEQEEKTRLFHAIDNMPCVKKKADWAIEWIQSEESSFGERLVAFAAVEGI 307
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSG+F +IFW KKRGL+PGLTFSNELISRDEGLHCDFACL++S L + +++ +++
Sbjct: 308 FFSGAFASIFWFKKRGLLPGLTFSNELISRDEGLHCDFACLIFSHLTYKPSKERIRNIIT 367
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIH 291
+AV+IE +F EALP LIGMN +LM+ Y++FVADRLL+ ++
Sbjct: 368 QAVDIEKEFWNEALPVGLIGMNVTLMNYYVEFVADRLLLELN 409
>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 170/276 (61%), Positives = 211/276 (76%), Gaps = 1/276 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
++ +E E +EP+L E R+ +FPI+Y +W+ YKKA+++FW E + L D+ WE+L
Sbjct: 7 KRSRKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKKARSNFWAMENIYLGNDMTDWEKL 66
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+HFI HVLAFFAA DGIVLEN RF+ ++Q+PE R FYGFQIAMENIHSE YS+L
Sbjct: 67 DDGERHFIKHVLAFFAARDGIVLENFVQRFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
++TY+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSF
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSF 186
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEI 254
CAIFWLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV I
Sbjct: 187 CAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSI 246
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E +F+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>gi|423315654|ref|ZP_17293559.1| ribonucleoside-diphosphate reductase subunit M2 [Bergeyella
zoohelcum ATCC 43767]
gi|405585758|gb|EKB59561.1| ribonucleoside-diphosphate reductase subunit M2 [Bergeyella
zoohelcum ATCC 43767]
Length = 329
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 214/267 (80%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EP+L+E RF +FPI++ +W+ YK A+ASFWTAEEVDLS D+ W+ +L D+E+ FIS
Sbjct: 9 EPLLIENKDRFVIFPIQHNDIWQFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 68
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
VLAFFAASDGIV ENLA FL ++Q PEAR FYGFQI +ENIHSEMYSLL++TY+KD
Sbjct: 69 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPI 128
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK L AIE IPCV +KAKWAL WI + SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDYLLRAIETIPCVTKKAKWALRWI-TKGSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFACLLY+ L+ +L + V ++ +AV IE +FV +AL
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYANHLQNKLSEETVKEIIVDAVAIEKEFVTDAL 247
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN+ LM QYI+FVADRLLV +
Sbjct: 248 PVKLIGMNAELMCQYIEFVADRLLVAL 274
>gi|406663814|ref|ZP_11071833.1| Ribonucleoside-diphosphate reductase subunit beta [Cecembia
lonarensis LW9]
gi|405551928|gb|EKB47525.1| Ribonucleoside-diphosphate reductase subunit beta [Cecembia
lonarensis LW9]
Length = 326
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 215/266 (80%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD++ W+ L D E+HFISH
Sbjct: 5 EPILQDNKNRFVLFPIQHDDIWQFYKKAEASFWTAEEIDLSQDLKDWKNLNDGERHFISH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMENIHSE YSLL++TYIK+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPVE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ +L NAIE+I CV +KA+WAL WI + SF ERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGL+FSNELISRDEGLHCDFAC LY+ + +L + V ++ +AVEIE +FV +ALP
Sbjct: 184 LMPGLSFSNELISRDEGLHCDFACHLYTKHVNNQLPKETVTKIIKDAVEIEKEFVTDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS LM QYI+FVADRLLV +
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVEL 269
>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
gi|373447227|gb|AEY72613.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V +++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRYIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 2]
Length = 324
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 164/270 (60%), Positives = 215/270 (79%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+++ EP+L E + RF MFP+ + +W+MYKK FW EE+D S+D+ HW +L E++
Sbjct: 3 KKNTEPLLTEDDNRFVMFPVSDETIWKMYKKQVDCFWRPEEIDTSKDMTHWNKLNTDEQY 62
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +LAFFA+SDGIVLENL RF+N++Q+ EARAFYGFQIAMENIHSE YSLL+++YIK
Sbjct: 63 FIKMILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSYIK 122
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
DS EKH+LF+++E+ PC+ +K WA+ WI SFA RLV FACVEGIFFSG+FC+I+W
Sbjct: 123 DSDEKHKLFHSLEHFPCIKKKGDWAMKWIQDKKSSFATRLVAFACVEGIFFSGAFCSIYW 182
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDE LH +FA LY+ L K+L+ +KV ++ EAV IE +F+
Sbjct: 183 LKKRGLMPGLTFSNELISRDEALHTEFAVYLYNRLEKKLNKKKVREIIEEAVTIEKEFIV 242
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPC +IGMNS LM+QYI+FVADRL++ +
Sbjct: 243 DALPCRMIGMNSELMTQYIEFVADRLMMQL 272
>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
Length = 393
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/266 (64%), Positives = 214/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALAWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L ++ +++ ++ +AV+IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQKPRRERIIEIIRDAVDIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVEL 339
>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 378
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/272 (64%), Positives = 214/272 (78%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF + PI Y +W+MYKKA+ASFWTAEEVDLS+D+ HWE L E++FIS+
Sbjct: 59 EPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLPHWEALKPEERYFISY 118
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD KE
Sbjct: 119 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 178
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA+WAL WI ++ F ER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 179 REFLFNAIETLPCVKKKAEWALRWISDREAPFCERIVAFAAVEGIFFSGSFASIFWLKKR 238
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACLL+ + + Q+V ++ +AV+IE +F+ EALP
Sbjct: 239 GLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFLTEALP 298
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN LM QYI+FVADRLL+ + +F
Sbjct: 299 VELIGMNCKLMKQYIEFVADRLLLELGFKKIF 330
>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
Length = 289
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/236 (77%), Positives = 207/236 (87%)
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLSQD+ W L +EKHFISHVLAFFAASDGIVLENLA RFL D+QIPEARAFYGF
Sbjct: 2 EEVDLSQDLYQWVNLTKNEKHFISHVLAFFAASDGIVLENLAGRFLKDVQIPEARAFYGF 61
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIA+ENIHSEMYSLLLETYI+DSKEK RLFNAI IPCVA+KA+WA+ WI SS SFAER+
Sbjct: 62 QIAIENIHSEMYSLLLETYIRDSKEKARLFNAINTIPCVARKAEWAMRWIQSSGSFAERI 121
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L
Sbjct: 122 VSFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLKSKLS 181
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++V +V +AV+IE +FVCEAL C L+GMN++LMSQYIKF+ADRLLV + ++
Sbjct: 182 EERVKAIVRDAVDIEREFVCEALSCDLVGMNATLMSQYIKFIADRLLVALGHGKMY 237
>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
gi|370988477|dbj|BAL43553.1| ribonucleotide reductase M2 beta [Xenopus laevis]
Length = 406
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF + PI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI++
Sbjct: 87 EPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEERYFIAY 146
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ E R FYGFQIAMENIHSEMYSLL++TYIKD KE
Sbjct: 147 VLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 206
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA+W+L WI ++ + ERLV FA VEGIFFSGSF +IFWLKKR
Sbjct: 207 REFLFNAIETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIFWLKKR 266
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACLL+ + + Q+V ++ +AV+IE +F+ EALP
Sbjct: 267 GLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFLTEALP 326
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN +LM QYI+FVADRLL+ +
Sbjct: 327 VELIGMNCTLMKQYIEFVADRLLLEL 352
>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 175/269 (65%), Positives = 211/269 (78%), Gaps = 1/269 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E RF + PI+Y ++W+MYKKA+ASFWTAEEVDLS+D + +L D E+ F+
Sbjct: 63 EDEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDDERMFV 122
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL F ++QIPEAR FYGFQIA+ENIHSEMYSLL+E+ IKD
Sbjct: 123 SHVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDK 182
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK LFNAIE +PCV +KA WAL+WI+ SF ER++ FA VEGIFFSGSF AIFWLK
Sbjct: 183 AEKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLK 242
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL+Y L + + V ++ +AV IE +F+ A
Sbjct: 243 KRGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSA 302
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIH 291
LP LIGMN +LM QYI+FVADRLLV ++
Sbjct: 303 LPVKLIGMNCALMRQYIEFVADRLLVALN 331
>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Meleagris gallopavo]
Length = 339
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 175/263 (66%), Positives = 210/263 (79%), Gaps = 1/263 (0%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L+ +N FPI+Y +W MYKKA+ASFWTAEEVDLS+D+QHWE L EK+FISHVLA
Sbjct: 23 LLRENPGGSSFPIQYHDIWRMYKKAEASFWTAEEVDLSKDLQHWESLKPEEKYFISHVLA 82
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDSKE+
Sbjct: 83 FFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREF 142
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LFNAIE +PCV +KA WA+ WI ++ ER+V FA VEGIFFSGSF +IFWLKKRGLM
Sbjct: 143 LFNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLM 202
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCAL 267
PGLTFSNELISRDEGLHCDFACL++ L ++ ++V ++ AV IE +F+ EALP L
Sbjct: 203 PGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKL 262
Query: 268 IGMNSSLMSQYIKFVADRLLVHI 290
IGMN +LM QYI+FVADRL++ +
Sbjct: 263 IGMNCTLMKQYIEFVADRLMLEL 285
>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
salmonis]
Length = 335
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 208/270 (77%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
QE E IL N ++ MFPI YK +W MYKKA A+FWT EEVDLS+D+ W +L EKH
Sbjct: 12 QEKNEIILTPNNSKYVMFPIVYKDIWFMYKKALATFWTVEEVDLSKDLMDWAKLNKDEKH 71
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS+VLAFFAASDGIV ENL RF +++QI EAR+FYGFQI +ENIHSEMYSLL++TYI+
Sbjct: 72 FISNVLAFFAASDGIVNENLLERFASEVQIAEARSFYGFQIMIENIHSEMYSLLIDTYIE 131
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D KEK +LFN+I I CV +KA+WAL WI FA RLV FA VEGIFFSGSF ++FWL
Sbjct: 132 DDKEKDKLFNSILTIECVKKKAEWALRWITGDKPFATRLVAFAAVEGIFFSGSFASLFWL 191
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEG H DFACLLYS L +L + V ++ E VEIE +FV +
Sbjct: 192 KKRGLMPGLTFSNELISRDEGSHTDFACLLYSHLENKLDPKYVLQIIKEGVEIEKEFVAD 251
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIH 291
+LP LIGMN+ +M YI+FVAD LL +++
Sbjct: 252 SLPVGLIGMNAKMMKNYIEFVADNLLENLN 281
>gi|132628|sp|P20493.1|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
Length = 319
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|373447466|gb|AEY72851.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448186|gb|AEY73568.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448417|gb|AEY73798.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448658|gb|AEY74038.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448899|gb|AEY74278.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373449129|gb|AEY74507.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373449370|gb|AEY74747.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 366 bits (939), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|885717|gb|AAA69333.1| C8L [Variola virus]
gi|885826|gb|AAA69439.1| C8L [Variola virus]
gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 366 bits (939), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YIKFVADRL+
Sbjct: 242 KLIGMNCEMMKTYIKFVADRLI 263
>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
gi|373447703|gb|AEY73087.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373447945|gb|AEY73328.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|439965889|gb|AGB75763.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|325557997|gb|ADZ29378.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSTGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
Length = 319
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
Length = 319
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|132629|sp|P11158.1|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
virus]
gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
Length = 319
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|378754645|gb|EHY64675.1| ribonucleoside-diphosphate reductase, beta subunit [Nematocida sp.
1 ERTm2]
Length = 334
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 180/287 (62%), Positives = 223/287 (77%), Gaps = 6/287 (2%)
Query: 14 QREQGEQEQ---EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQ 70
QRE + Q +EPIL E N RF +FPI + +W +YK A A FWTAEEVDLS+D
Sbjct: 3 QREAQKTTQIISRPEEPILTESNNRFVIFPIEHHDIWALYKDAVAVFWTAEEVDLSKDQA 62
Query: 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W+ L ++E+HFIS+VLAFFAASDGIV ENL RF +++QI EAR FYGFQI +ENIH+E
Sbjct: 63 DWDNLNNNERHFISYVLAFFAASDGIVNENLVERFASEVQISEARCFYGFQIMIENIHAE 122
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGI 189
MYSLL++TYIKD+ EK+ LF AIENIP + +KA WAL WI + SFA+RLV FACVEGI
Sbjct: 123 MYSLLIDTYIKDTAEKNFLFQAIENIPVIKKKADWALRWISDKEASFADRLVAFACVEGI 182
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL+S L + + + +V
Sbjct: 183 FFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLHSHLVNKC--ENISKIVL 240
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAVEIE +F+ +ALP +LIG+N+ M QYI+FVADRLL+ +++ +F
Sbjct: 241 EAVEIEKEFLTDALPVSLIGINADTMCQYIEFVADRLLLALNEEKIF 287
>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
Length = 326
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 213/267 (79%), Gaps = 2/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
QEPIL E RF +FPI++ +WE YKKA+ASFWTAEE+DL QD+ W+ L D E+HFIS
Sbjct: 3 QEPILSENKNRFVLFPIQHADIWEYYKKAEASFWTAEEIDLGQDMVDWKSLNDGERHFIS 62
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMENIHSE YSLL++TYIKD
Sbjct: 63 HVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDPS 122
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ +LFNAIE+I CV +KA WAL WI + + F ERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 123 ERDKLFNAIEHIDCVKKKADWALRWIDNGN-FQERLIAFAAVEGIFFSGSFCSIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFAC LY+ + L + V ++ +AV+IE +FV +AL
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACHLYTKHVVNPLPKETVREIIIDAVKIEKEFVTDAL 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS LM QYI+FVADRLL+ +
Sbjct: 242 PVRLIGMNSDLMCQYIEFVADRLLLEL 268
>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
Length = 319
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/269 (65%), Positives = 211/269 (78%), Gaps = 1/269 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E RF + PI+Y ++W+MYKKA+ASFWTAEEVDLS+D + +L D E+ F+
Sbjct: 63 EDEPLLRENPHRFVILPIQYTEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDHERMFV 122
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL F ++QIPEAR FYGFQIA+ENIHSEMYSLL+E+ IKD
Sbjct: 123 SHVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDK 182
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK LFNAIE +PCV +KA WAL+WI+ SF ER++ FA VEGIFFSGSF AIFWLK
Sbjct: 183 AEKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLK 242
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL+Y L + + V ++ +AV IE +F+ A
Sbjct: 243 KRGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSA 302
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIH 291
LP LIGMN +LM QYI+FVADRLLV ++
Sbjct: 303 LPVKLIGMNCALMRQYIEFVADRLLVALN 331
>gi|56404698|sp|O57175.1|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
gi|325514058|gb|ADZ24052.1| ribonucleotide reductase small subunit protein [Cowpox virus]
gi|325557783|gb|ADZ29165.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
Length = 325
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 208/267 (77%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EPIL + R+ +FPI YK +W MYKKA ASFWT EEVDLS+D W +L ++EK FI
Sbjct: 5 SEPILRQTTGRYVVFPIVYKDIWMMYKKAVASFWTVEEVDLSKDFPDWLKLSENEKKFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA RF +++Q+ EAR FYGFQIAMENIHSEMYSLL++TYI DSK
Sbjct: 65 HILAFFAASDGIVNENLAERFYSEVQVSEARCFYGFQIAMENIHSEMYSLLIDTYILDSK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK+ LFNAIEN+ CV QKA WA WI S +S + ERL+ FA VEGIFFSGSF AIFW+KK
Sbjct: 125 EKNYLFNAIENMNCVKQKANWARKWIESKNSTYGERLIAFAAVEGIFFSGSFAAIFWIKK 184
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFAC+++ L + +V EAV+IE F+ EA+
Sbjct: 185 RGLMPGLTFSNELISRDEGLHCDFACMMFKHLSNPPLENVIRDIVIEAVDIEKNFLTEAM 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN LM QYI+FVADRLL+ +
Sbjct: 245 PVKLIGMNCDLMKQYIEFVADRLLLEL 271
>gi|424842989|ref|ZP_18267614.1| ribonucleotide reductase, beta subunit [Saprospira grandis DSM
2844]
gi|395321187|gb|EJF54108.1| ribonucleotide reductase, beta subunit [Saprospira grandis DSM
2844]
Length = 323
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/271 (61%), Positives = 216/271 (79%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E +QRF +FPI++ +WEM K+A A FWT +E+DL+ D+ W++L +E+HFI
Sbjct: 5 EPILQENDQRFVLFPIQHDAIWEMRKQALACFWTTDEIDLAADLHDWKKLSANEQHFIKQ 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL F D+Q+ EAR+FY QI +E+IH+E YSLL++TYI+DS E
Sbjct: 65 VLAFFAASDGIVNENLVLNFYRDVQLAEARSFYATQIQIEDIHAETYSLLIDTYIQDSAE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNA++ +PCV +KAKWA+ WI + SFA RL+ FA VEGIFFSGSFC+I+WLKKRG
Sbjct: 125 KNELFNAMQTLPCVQRKAKWAIKWIEEAPSFAHRLIAFAAVEGIFFSGSFCSIYWLKKRG 184
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
+MPGLTFSNELISRDEG+HCDFACLLYS+L L +++ ++ EAV +E +FV +ALP
Sbjct: 185 IMPGLTFSNELISRDEGMHCDFACLLYSMLENPLPSEELRSIITEAVSLEQEFVTDALPV 244
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+LIGMN+ LMSQYI+FVADRLLV + Q ++
Sbjct: 245 SLIGMNAKLMSQYIEFVADRLLVSLGQPKVY 275
>gi|406672898|ref|ZP_11080123.1| ribonucleoside-diphosphate reductase small chain [Bergeyella
zoohelcum CCUG 30536]
gi|405587442|gb|EKB61170.1| ribonucleoside-diphosphate reductase small chain [Bergeyella
zoohelcum CCUG 30536]
Length = 329
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EP+L+E RF +FPI++ +W+ YK A+ASFWTAEEVDLS D+ W+ +L D+E+ FIS
Sbjct: 9 EPLLIENKDRFVIFPIQHNDIWKFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 68
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
VLAFFAASDGIV ENLA FL ++Q PEAR FYGFQI +ENIHSEMYSLL++TY+KD
Sbjct: 69 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPT 128
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK L AIE IPCV +KA+WAL WI SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDYLLRAIETIPCVTKKAEWALRWIEKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFACLLY+ L+ +L + V ++ +AV IE +FV +AL
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYANHLKNKLPEETVREIIVDAVAIEKEFVTDAL 247
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN+ LM QYI+FVADRLLV +
Sbjct: 248 PVKLIGMNAELMCQYIEFVADRLLVAL 274
>gi|408673955|ref|YP_006873703.1| ribonucleotide reductase [Emticicia oligotrophica DSM 17448]
gi|387855579|gb|AFK03676.1| ribonucleotide reductase [Emticicia oligotrophica DSM 17448]
Length = 328
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/263 (65%), Positives = 212/263 (80%), Gaps = 2/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L+E RF +FPI++ +WE YKK +ASFWTAEE+DLS D+Q W +L D E+HFISH
Sbjct: 10 EPLLIEDKTRFVLFPIKHNDIWEFYKKHEASFWTAEEIDLSPDLQDWAKLSDGERHFISH 69
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F++ +Q EA+ FYGFQI MENIHSE YSLL++TYIKD+ E
Sbjct: 70 VLAFFAASDGIVNENLAVNFISRVQFAEAKCFYGFQIMMENIHSETYSLLIDTYIKDAVE 129
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ ++ NAI++IPCV +KA WAL WI + F +RL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 RDKMLNAIDHIPCVKKKADWALKWIEQGN-FIDRLLAFAVVEGIFFSGSFCSIFWLKKRG 188
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLH DFACLLY+ ++ + KV+ +V +AVEIE +FV +ALP
Sbjct: 189 LMPGLTFSNELISRDEGLHRDFACLLYTQYIQNKYPADKVYSLVRDAVEIEKEFVTDALP 248
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+LIGMN+ LM QYI+FVAD LL
Sbjct: 249 VSLIGMNAELMCQYIEFVADHLL 271
>gi|387592558|gb|EIJ87582.1| ribonucleotide reductase small subunit RnrA [Nematocida parisii
ERTm3]
gi|387595184|gb|EIJ92809.1| ribonucleotide reductase small subunit RnrA [Nematocida parisii
ERTm1]
Length = 343
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 218/276 (78%), Gaps = 3/276 (1%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E EPIL E N RF +FPI + +W MYK A A FWTAEEVDLS D WE+L +E+H
Sbjct: 23 EEVYEPILQESNNRFVIFPIEHHDIWAMYKDAVAVFWTAEEVDLSNDQADWEKLNANERH 82
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS+VLAFFAASDGIV ENL RF +++QI EAR FYGFQI +ENIH+EMYSLL++TYIK
Sbjct: 83 FISYVLAFFAASDGIVNENLVERFASEVQISEARCFYGFQIMIENIHAEMYSLLIDTYIK 142
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFW 200
D+ EK+ LF A+ENIP + +KA WAL WI + SFA+RLV FACVEGIFFSGSF +IFW
Sbjct: 143 DTAEKNFLFQAMENIPVIKKKADWALRWISDKESSFADRLVAFACVEGIFFSGSFASIFW 202
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACLL+S L + + + +V EAVEIE +F+
Sbjct: 203 LKKRGLMPGLTFSNELISRDEGLHCDFACLLHSHLINKC--KNIKKIVLEAVEIEKEFLT 260
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ALP +LIG+NS M QYI+FVADRLL+ +++ ++
Sbjct: 261 DALPVSLIGINSDSMCQYIEFVADRLLIALNEEKVY 296
>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
Length = 319
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 205/262 (78%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L +EK+FI H
Sbjct: 2 EPILAKNQNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVISIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
gi|325558644|gb|ADZ30022.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 202/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ F VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFTAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLI 277
>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/276 (63%), Positives = 214/276 (77%), Gaps = 1/276 (0%)
Query: 13 NQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
+ R + + +EP+L E RF +FPI+ ++W+MYKKA+ASFWTAEE+DL++D++ W
Sbjct: 3 DHRRAESEGRHAEEPLLKENPGRFVLFPIKEPEIWKMYKKAEASFWTAEEIDLAEDLKDW 62
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
E L +E+HF+SHVLAFFAASDGIV ENL F ++ EAR FYGFQIA+ENIHSE Y
Sbjct: 63 ESLSINERHFVSHVLAFFAASDGIVNENLTGNFSTEVTSAEARCFYGFQIAVENIHSETY 122
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFF 191
SLL++TYIKD++EK L NAIE +PCV +KA WAL W + + SFAER + FA VEGIFF
Sbjct: 123 SLLIDTYIKDAQEKDHLLNAIETVPCVQKKANWALRWCDAGNASFAERCIAFAAVEGIFF 182
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
SGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDFACL+YS L +L ++ ++ A
Sbjct: 183 SGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLIYSKLVNQLPESRIEEIITNA 242
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
VEIE +FV +ALP LIGMNS LM QYI+F ADRLL
Sbjct: 243 VEIEKEFVSDALPVELIGMNSKLMCQYIEFCADRLL 278
>gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 324
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EP+L + RF +FPI++ +W+ YK A+ASFWTAEEVDLS D+ W+ +L D+E+ FIS
Sbjct: 4 EPLLQDNKDRFVIFPIQHNDIWQFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 63
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
VLAFFAASDGIV ENLA FL ++Q PEAR FYGFQI +ENIHSEMYSLL++TY+KD
Sbjct: 64 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPA 123
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK L AIE IPCV +KAKWAL WI + SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDYLLRAIETIPCVTKKAKWALRWI-TKGSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFACLLY + L+ +L + + ++ +AV IE +FV +AL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACLLYVNHLQNKLSEETIREIIVDAVAIEKEFVTDAL 242
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN+ LM QYI+FVADRLLV +
Sbjct: 243 PVKLIGMNAELMCQYIEFVADRLLVAL 269
>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
Length = 349
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/275 (63%), Positives = 215/275 (78%), Gaps = 2/275 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI++ +WE YK +ASFWTAEE+DL QD++ W L D E+HFISH
Sbjct: 8 EPILEEDKGRFVLFPIKHWDIWEYYKTHEASFWTAEEIDLGQDMKDWNSLNDGERHFISH 67
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA FL+++Q EA+ FYGFQ+ MENIHSE YSLL++TYIKD E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVE 127
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K RL NAI+ IPCV +KA+WAL WI + SFAERL+ FA VEGIFFSGSFC+I+WLKKRG
Sbjct: 128 KDRLLNAIDTIPCVQKKAEWALRWIDNG-SFAERLIAFAVVEGIFFSGSFCSIYWLKKRG 186
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
+MPGLTFSNELISRDEGLH DFAC+LY+ + +L +++ ++ AVEIE +FV +ALP
Sbjct: 187 MMPGLTFSNELISRDEGLHRDFACMLYTDHIVNKLPESQIYDIIRNAVEIEQEFVADALP 246
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+LIGMN+ LM QYI FVAD LLV + ++ +A
Sbjct: 247 VSLIGMNAELMKQYIAFVADHLLVTLGLRKMYNVA 281
>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
Length = 354
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 214/270 (79%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
E E +L E RF +FPIRY +WE YK+A ASFWT EEVD + D+ ++ +L + E+
Sbjct: 21 SELDEAVLRENPNRFTLFPIRYPDLWEFYKRAVASFWTVEEVDFTGDLYDFDHKLKEEER 80
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
FI +VLAFFAASDGIV+ENL+ARF++++Q+PEARAFYGFQIAMEN+HSEMYS+LL+ Y+
Sbjct: 81 RFIKYVLAFFAASDGIVMENLSARFMSEVQVPEARAFYGFQIAMENVHSEMYSVLLDHYV 140
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFW 200
+D E+ +LFNAI+ I V +KA WAL WI SS+SFAERLV FACVEGI FSGSFCAIFW
Sbjct: 141 RDPAERRQLFNAIQTIATVGKKADWALRWISSSNSFAERLVAFACVEGIHFSGSFCAIFW 200
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKR LMPGL+FSN LISRDEGLHCDFAC LY L+ RL ++V +V EAV +E +F
Sbjct: 201 LKKRLLMPGLSFSNCLISRDEGLHCDFACCLYGHLKNRLSRERVVKIVDEAVRLEDEFCT 260
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAL C L+GMN+ LM QYI+FVADRLLV +
Sbjct: 261 EALSCELLGMNADLMRQYIRFVADRLLVSL 290
>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
Length = 328
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 215/270 (79%), Gaps = 2/270 (0%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS 78
++E EP+LM+ RF +FPI++ +WE YKKA+ASFWTAEE+DLSQD + W L D
Sbjct: 3 DEELRQIEPLLMDDPTRFVIFPIKHNDIWEFYKKAEASFWTAEELDLSQDHKDWASLNDG 62
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+HFISHVLAFFAASDGIV ENLA FL+++Q EA+ FYGFQI +ENIH+E YSLL++T
Sbjct: 63 ERHFISHVLAFFAASDGIVNENLAVGFLSNVQYAEAKCFYGFQIMIENIHAETYSLLIDT 122
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAI 198
YIKD+ E+ R+ NAIE IPCV +KA WA+ WI +F ERL+ FA VEGIFFSGSFC+I
Sbjct: 123 YIKDTTERQRMLNAIETIPCVKKKADWAIRWIEQG-TFIERLIAFAAVEGIFFSGSFCSI 181
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQ 257
FWLKKRGLMPGLTFSNELISRDEGLH DFACLLY+ + +L ++V+ ++ +AVEIE +
Sbjct: 182 FWLKKRGLMPGLTFSNELISRDEGLHRDFACLLYTKYIVNKLPEEQVYTIIKDAVEIEKE 241
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLL 287
FV +ALP +LIGMN+ M QYI+FVAD LL
Sbjct: 242 FVSDALPVSLIGMNAPQMCQYIEFVADHLL 271
>gi|383866746|gb|AFH54589.1| ribonucleotide reductase small subunit [Ectromelia virus]
Length = 319
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++Q+ EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/269 (65%), Positives = 211/269 (78%), Gaps = 1/269 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E RF + PI+Y ++W+MYKKA+ASFWTAEEVDLS+D + +L D E+ F+
Sbjct: 20 EDEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDDERMFV 79
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL F ++QIPEAR FYGFQIA+ENIHSEMYSLL+E+ IKD
Sbjct: 80 SHVLAFFAASDGIVNENLVECFSQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDK 139
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK LFNAIE +PCV +KA WAL+WI+ SF ER++ FA VEGIFFSGSF AIFWLK
Sbjct: 140 AEKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLK 199
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL+Y L + + V ++ +AV IE +F+ A
Sbjct: 200 KRGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSA 259
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIH 291
LP LIGMN +LM QYI+FVADRLLV ++
Sbjct: 260 LPVKLIGMNCALMRQYIEFVADRLLVALN 288
>gi|340059497|emb|CCC53882.1| putative ribonucleoside-diphosphate reductase small chain,
fragment, partial [Trypanosoma vivax Y486]
Length = 323
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 213/264 (80%), Gaps = 1/264 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L+ R+ +FPI+Y +W YK+A++S WT EE+DLS D+ W+++ D+E+HFI H
Sbjct: 4 EPLLLPNPDRYVIFPIKYHDIWRKYKEAESSIWTVEEIDLSNDLADWKKIDDNERHFIKH 63
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIVLENLA RF+ ++QIPEAR FYGFQIA+EN+H+E YS+LL+TYI D E
Sbjct: 64 VLAFFAASDGIVLENLAQRFMAEVQIPEARCFYGFQIAIENVHAETYSVLLDTYILDPDE 123
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ L AI IP + +KA+WA+ WI S+ SFAERLV FA VEGIFFSGSFCA+FWLKKRG
Sbjct: 124 KNHLLRAIFTIPSIKKKAEWAIQWIESTASFAERLVAFAAVEGIFFSGSFCALFWLKKRG 183
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLH +FACLLY + RL ++V ++ AV+IE +F+CE++P
Sbjct: 184 LMPGLTFSNELISRDEGLHTEFACLLYEKYIVNRLTDERVREIICGAVDIEREFICESIP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLV 288
+IGMNS LM++YIKFVADRLLV
Sbjct: 244 VHMIGMNSDLMTKYIKFVADRLLV 267
>gi|885759|gb|AAA69374.1| E4L [Variola virus]
gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|367014807|ref|XP_003681903.1| hypothetical protein TDEL_0E04490 [Torulaspora delbrueckii]
gi|359749564|emb|CCE92692.1| hypothetical protein TDEL_0E04490 [Torulaspora delbrueckii]
Length = 399
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 174/295 (58%), Positives = 224/295 (75%), Gaps = 6/295 (2%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L+E +RF +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 68 KEMEKDEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 127
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 128 ERFFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDT 187
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIENIP + +KA+WA+ WI S+S FAERLV FA +EG FFSGSF A
Sbjct: 188 YIKDPKESDFLFNAIENIPQIKEKAEWAIRWIQDSESIFAERLVAFAAIEGYFFSGSFAA 247
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKK+GLMPGLTFSNELI RDEGLH DFACLL++ L+ + + ++ EAVEIE +
Sbjct: 248 IFWLKKKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPSIIEKIITEAVEIEKR 307
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIAC----VKGIARAG 308
+ +ALP +L+GMN+ LM+QY++FVADRLLV F + ++ I+ AG
Sbjct: 308 YFIDALPVSLLGMNADLMNQYVEFVADRLLVAFGNKKFFNVTNPFDFMENISLAG 362
>gi|297209|emb|CAA48969.1| C8L [Variola virus]
gi|745144|prf||2015436AF C8L gene
Length = 333
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M Y++FVADRL+
Sbjct: 256 KLIGMNCEMMKTYMEFVADRLI 277
>gi|410027779|ref|ZP_11277615.1| ribonucleotide reductase subunit beta [Marinilabilia sp. AK2]
Length = 326
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 213/266 (80%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD++ W+ L D E+HFISH
Sbjct: 5 EPILQENKNRFVLFPIQHDDIWQFYKKAEASFWTAEEIDLSQDLKDWKDLNDGERHFISH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMENIHSE YSLL++TYIK+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPVE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ +L NAIE+I CV +KA+WAL WI + + F ERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIENGN-FQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLHCDFAC LY+ + L V ++ +AVEIE +FV +ALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTQHVLNPLPKSTVIEIIKDAVEIEKEFVTDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS LM QYI+FVADRLLV +
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVEL 269
>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
Length = 349
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/267 (64%), Positives = 211/267 (79%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EP+L E RF +FPI + VW+MYKKA+ASFWTAEE+DL D++ W+ +L D E+HFI
Sbjct: 29 EPLLTEDPHRFVLFPIEHDDVWQMYKKAEASFWTAEEIDLCHDIKDWDQKLNDKERHFIK 88
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F ++Q EAR FYGFQIA+ENIHSE+YSLL++TYI+D+K
Sbjct: 89 HVLAFFAASDGIVNENLAQNFATEVQWAEARCFYGFQIAIENIHSEVYSLLIDTYIRDAK 148
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EKH AI+ +PCV +KA+WAL W SFAER++ FA VEGIFFSGSFCA+FWLKK
Sbjct: 149 EKHECLTAIDTMPCVTKKAQWALRWCDPDRASFAERIIAFAAVEGIFFSGSFCAVFWLKK 208
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGL+FSNELISRDEG+HCDFACLLYS LR +L + ++ ++ +AV IE +FV AL
Sbjct: 209 RGLMPGLSFSNELISRDEGMHCDFACLLYSKLRNKLPVETINALIGDAVTIEKEFVVSAL 268
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS M QYI+F ADRLL+ +
Sbjct: 269 PVELIGMNSRTMCQYIEFCADRLLLAL 295
>gi|344234526|gb|EGV66394.1| hypothetical protein CANTEDRAFT_112123 [Candida tenuis ATCC 10573]
Length = 423
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 213/270 (78%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DL +D W RL D+E+
Sbjct: 94 EKDEPLLVENTKRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNNRLNDNERF 153
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F+S +LAFFAASDGIV ENL F ++Q+PEA+ FYGFQI MENIHSE YSLL+++YIK
Sbjct: 154 FVSRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDSYIK 213
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAIE IP + +KA WAL WI+ SD+ F ERLV FA VEGIFFSGSF +IFW
Sbjct: 214 DPKEADFLFNAIETIPQIKRKADWALRWINDSDALFGERLVAFAAVEGIFFSGSFASIFW 273
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL+S L+ R + + V ++ EAV IE ++
Sbjct: 274 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPNPEIVEQIITEAVAIEKEYFT 333
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +L+GMN +LM QY++FVADRLLV +
Sbjct: 334 DALPISLLGMNCTLMCQYVEFVADRLLVAL 363
>gi|373449611|gb|AEY74987.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 202/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNR 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
Length = 319
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++Q+ EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+F+ADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFIADRLI 263
>gi|343428030|emb|CBQ71554.1| probable small subunit of ribonucleotide reductase [Sporisorium
reilianum SRZ2]
Length = 425
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 215/270 (79%), Gaps = 2/270 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFA 91
++RF +FPIR+ ++W+MYKKA+ASFWTAEE+DLS+D+ W+ +L D+E+HFISHVLAFFA
Sbjct: 103 SRRFVLFPIRFNEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFA 162
Query: 92 ASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
ASDGIV ENL RF +++Q EAR FYGFQI MENIHSE YSLL++TYI++ +++ LF+
Sbjct: 163 ASDGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREFLFD 222
Query: 152 AIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A+E IP V QKA WAL WI +FAERLV FA VEGIFFSGSF +IFWLKKRGLMPGL
Sbjct: 223 AVETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGL 282
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
TFSNELISRDEGLH DFACLL+S L+KR H V ++ EAV+IE +F+ A+P A+IGM
Sbjct: 283 TFSNELISRDEGLHTDFACLLFSHLKKRAHPDTVLKIITEAVDIEIEFLTTAIPVAMIGM 342
Query: 271 NSSLMSQYIKFVADRLLVHIHQCSLFIIAC 300
+ M+QYIK+VADRLLV + + +C
Sbjct: 343 SVKSMTQYIKYVADRLLVSLGNPGFYSESC 372
>gi|357628103|gb|EHJ77546.1| ribonucleoside-diphosphate reductase small chain [Danaus plexippus]
Length = 374
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/266 (64%), Positives = 211/266 (79%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ WE L D E+HFI H
Sbjct: 55 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWESLKDCERHFIKH 114
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMEN+HSEMYSLL++TYI+D KE
Sbjct: 115 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 174
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WAL WI S + +F ER+V FA VEGIFFSGSF +IFW+KKR
Sbjct: 175 RDFLFNAIETLPCVKKKADWALQWIASKTATFGERIVAFAAVEGIFFSGSFASIFWMKKR 234
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACL++ L ++ V ++ +AV IE +F+ +ALP
Sbjct: 235 GLMPGLTFSNELISRDEGLHTDFACLMFKHLVQKPSKDCVLKIIKDAVVIEQEFLTDALP 294
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
L+GMN LMS YI+FVADRLL+ +
Sbjct: 295 VRLLGMNCELMSDYIEFVADRLLMEL 320
>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
Length = 362
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 216/270 (80%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E +EP+L + RF +FPI+Y ++W MYKK +ASFWTAEE+DLS+D+ WE R+ D+E+H
Sbjct: 40 EHEEPLLKDSISRFVLFPIQYHEIWAMYKKEEASFWTAEEMDLSKDLHDWEERMNDNERH 99
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISHVLAFFAASDGIV ENL RF ++++PEAR FYGFQI MEN+HSE YSLL++TYI+
Sbjct: 100 FISHVLAFFAASDGIVNENLLTRFCGEVKVPEARCFYGFQIMMENVHSETYSLLIDTYIR 159
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFW 200
D ++ L NA+E IPCV +KA+WAL WI SFA RLV F+ VEGIFFSGSF +IFW
Sbjct: 160 DPAQRTFLLNAVETIPCVRKKAEWALRWIADRRSSFAIRLVAFSAVEGIFFSGSFASIFW 219
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI+RDEG+H DFACLL + +R+R H + + ++ EAV IE +F+
Sbjct: 220 LKKRGLMPGLTFSNELITRDEGMHTDFACLLLTHMRRRPHPEVIEMIIKEAVAIEKEFLT 279
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +LIGMN+ LM QYI+FVADRLLV +
Sbjct: 280 DALPVSLIGMNADLMCQYIEFVADRLLVAL 309
>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|451327718|gb|AGF36590.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|451327926|gb|AGF36797.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 202/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/282 (62%), Positives = 221/282 (78%), Gaps = 2/282 (0%)
Query: 11 EVNQREQGEQEQE-DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDV 69
EV++ + E E EP+L+E RF +FPI+ +VW+MYKKA+A FWTAEE+DL+ D
Sbjct: 45 EVSEMRRKEMEGTLKPEPLLVENPGRFVLFPIQDNEVWQMYKKAEACFWTAEELDLAHDH 104
Query: 70 QHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHS 129
+ WE L D E+HF+ HVLAFFAASDGIV ENLA+ F ++IQ+ EAR FYGFQIA+ENIHS
Sbjct: 105 KDWEGLTDDERHFVKHVLAFFAASDGIVNENLASNFSSEIQLSEARCFYGFQIAIENIHS 164
Query: 130 EMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEG 188
E+YSLL++TY+KD+ EK LFNA+E +PCV +KA+WAL W S+AERLV FA VEG
Sbjct: 165 EVYSLLIDTYVKDAAEKTHLFNAMETVPCVRRKARWALRWCDPKLASYAERLVAFAAVEG 224
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSFCA+FWLKKRGLMPGL FSNELISRDEGLH DFACLL+ L +L ++V ++
Sbjct: 225 IFFSGSFCAVFWLKKRGLMPGLCFSNELISRDEGLHTDFACLLFRKLVNKLPVERVAEII 284
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+AV+IE +F+ ALP LIGMNS+LM QYI+F ADRLL+ +
Sbjct: 285 CDAVDIEKEFITSALPVELIGMNSALMRQYIEFCADRLLMEL 326
>gi|440751431|ref|ZP_20930664.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Mariniradius saccharolyticus AK6]
gi|436480073|gb|ELP36338.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Mariniradius saccharolyticus AK6]
Length = 326
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 214/266 (80%), Gaps = 2/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E RF +FPI++ +W+ YKKA+ASFWTAEE+DLSQD++ W+ L D E+HFISH
Sbjct: 5 EPILQENKDRFVLFPIQHDDIWKFYKKAEASFWTAEEIDLSQDLRDWKNLNDGERHFISH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMENIHSE YSLL++TYIKD+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDAVE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ RL +AIE+I C+ +KA+WAL WI + + F ERL+ FA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDRLLHAIEHIDCIKKKAEWALRWIDNGN-FQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
LMPGLTFSNELISRDEGLHCDFAC LY+ + L + V ++ +AV IE +FV +ALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTKHVVNHLPKETVTRIIMDAVAIEKEFVTDALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS LM QYI+FVADRLLV +
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVEL 269
>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Ogataea parapolymorpha DL-1]
Length = 408
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 171/272 (62%), Positives = 216/272 (79%), Gaps = 2/272 (0%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSE 79
+ E EP+L+E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D+E
Sbjct: 77 QMEKDEPLLVENKRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDNE 136
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
++F+S VLAFFAASDGIV ENL F ++Q+PEA+ FYGFQI MENIHSE YSLL++TY
Sbjct: 137 RYFVSRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTY 196
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
+KD KE LFNAIE IPC+ +KA+WA+ WI+ ++ FAERLV FA VEGIFFSGSF +I
Sbjct: 197 VKDPKEAEFLFNAIETIPCIKEKAEWAMRWINDEEALFAERLVAFAAVEGIFFSGSFASI 256
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELI RDEGLH DFACLL+S L + V ++ EAV+IE ++
Sbjct: 257 FWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNTPNNDIVLKIITEAVDIEKRY 316
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP L+GMN SLM QY++FVADRLL+ +
Sbjct: 317 FTDALPVNLLGMNCSLMCQYVEFVADRLLLSL 348
>gi|431797145|ref|YP_007224049.1| ribonucleotide reductase subunit beta [Echinicola vietnamensis DSM
17526]
gi|430787910|gb|AGA78039.1| ribonucleotide reductase, beta subunit [Echinicola vietnamensis DSM
17526]
Length = 327
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EPIL + N RF +FPI++ +WE YKKA+ASFWTAEE+DL QD++ W+ L D E+HFIS
Sbjct: 5 EPILEQGDNSRFVLFPIQHDDIWEFYKKAEASFWTAEEIDLGQDMKDWKNLSDDERHFIS 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMENIHSE YSLL++TYIK+ K
Sbjct: 65 HVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKEPK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ RLFNAIE++ CV +KA WAL WI D F ERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 ERDRLFNAIEHLDCVKKKADWALRWIDEGD-FQERLIAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFAC LY+ + L + V ++ +AV IE +FV +AL
Sbjct: 184 GLMPGLTFSNELISRDEGLHCDFACHLYTQHIVNPLPKETVSKIIQDAVAIEKEFVTDAL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN+ LM QYI+FVADRLL+ +
Sbjct: 244 PVRLIGMNADLMCQYIEFVADRLLLEL 270
>gi|351712114|gb|EHB15033.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial
[Heterocephalus glaber]
Length = 334
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 177/292 (60%), Positives = 218/292 (74%), Gaps = 12/292 (4%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
N TEN VN E EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDL
Sbjct: 6 NTTENAVNSNE---------EPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDL 56
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW +L EK+FISH+LAFFAASDGIV ENL F ++Q+PE FYGFQI +E
Sbjct: 57 SKDLPHWNKLKPDEKYFISHILAFFAASDGIVNENLV--FSQEVQVPEPCCFYGFQILIE 114
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFA 184
N+HSEMYSLL++TYI+D +++ LFNAIE +P V +KA WAL WI S F ER+V FA
Sbjct: 115 NVHSEMYSLLIDTYIRDPEKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFA 174
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + +V
Sbjct: 175 AVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPAEDRV 234
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 235 QEIIVDAVRIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 286
>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
saltator]
Length = 344
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/275 (64%), Positives = 217/275 (78%), Gaps = 3/275 (1%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ-DVQHWERLLD 77
E+ D EP+L E+ RF +FPIRY +W+MYKKA ASFWT EEV L + D + WE L+
Sbjct: 11 EEFNPDLEPLLQEEPNRFVIFPIRYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEKLN 70
Query: 78 S-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
S E++FISHVLAFFAASDGIV ENL RF +++I EAR FYGFQIA+ENIHSEMYSLL+
Sbjct: 71 SDERYFISHVLAFFAASDGIVNENLIERFCQEVKISEARCFYGFQIAIENIHSEMYSLLI 130
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSF 195
ETYI D KEK LFNAIE +PCV +KA WAL+WI H S +F ER+V FA VEGIFFSGSF
Sbjct: 131 ETYISDLKEKDFLFNAIETLPCVTKKANWALNWINHESATFPERIVAFAAVEGIFFSGSF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
AIFWLKKRG+MPGLTFSNELISRDEGLHCDFACL++ + ++ +++V ++ +AVEIE
Sbjct: 191 AAIFWLKKRGVMPGLTFSNELISRDEGLHCDFACLMFKHVIQKPSFERVKTIIMDAVEIE 250
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ +ALP LIGMN +LM YI+FVADRL V +
Sbjct: 251 KEFLTQALPVKLIGMNCTLMCTYIEFVADRLFVAL 285
>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
gi|56404692|sp|Q9DHU2.1|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
Length = 325
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL ++ +FPI Y+ +W+MYKKA ASFWT EEVDLS+D W +L D+EK+FI H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++QI EAR FYGFQIAMENIHSEMYSLL++TYI DSKE
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K+ LFNAIEN+ CV QKA WA WI S + ++ ERLV FA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFAC+++ L V ++ EAV IE F+ EA+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LM QYI+FVADRLL+ +
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLEL 271
>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
Length = 325
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL ++ +FPI Y+ +W+MYKKA ASFWT EEVDLS+D W +L D+EK+FI H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++QI EAR FYGFQIAMENIHSEMYSLL++TYI DSKE
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K+ LFNAIEN+ CV QKA WA WI S + ++ ERLV FA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFAC+++ L V ++ EAV IE F+ EA+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LM QYI+FVADRLL+ +
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLEL 271
>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
gi|464615|sp|P33799.1|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 319
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M Y++FVADRL+
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLI 263
>gi|410910828|ref|XP_003968892.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Takifugu rubripes]
Length = 360
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 174/282 (61%), Positives = 215/282 (76%), Gaps = 3/282 (1%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
E G + Q EP+L E +RF +FPI+Y +W+MYK+AQASFWT EEVDLS+D+ HW+ L
Sbjct: 33 ESGSETQ--GEPLLEENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDSL 90
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
EKHF+SHVLAFFAASDGIV ENL RF ++Q+PEAR+FY Q+ ME++HSEMYSLL
Sbjct: 91 KHEEKHFVSHVLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSCQVLMESVHSEMYSLL 150
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGS 194
+ TYI+D KE+ LFNAI +PCV +KA WAL WI+ + +F ERLV FA VEGIFFSGS
Sbjct: 151 INTYIRDLKERDYLFNAIHTMPCVKRKADWALHWINDRTSTFGERLVAFAAVEGIFFSGS 210
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F +I+WLKKRGLMPGLT+SNELISRDEGLHC FACLL+S L K+ +V +V +AV I
Sbjct: 211 FASIYWLKKRGLMPGLTYSNELISRDEGLHCTFACLLFSYLVKKPSEDRVKDIVTKAVSI 270
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
E +F+ EALP LIGMN LM QYI+FVADRL + ++
Sbjct: 271 EQEFLMEALPVDLIGMNCCLMKQYIEFVADRLFADLGLAKVY 312
>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
Length = 319
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 202/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGL CDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLRCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMETYIEFVADRLI 263
>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
Length = 319
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 202/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKR
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRD 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVKSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|266919|sp|P29883.1|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
Length = 319
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W ++ EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGF++A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|397573555|gb|EJK48757.1| hypothetical protein THAOC_32419 [Thalassiosira oceanica]
Length = 480
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 180/284 (63%), Positives = 217/284 (76%), Gaps = 5/284 (1%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQV--WEMYKKAQASFWTAEEVDLSQDVQH 71
+R + E D EP+LM+ RF +FPI+ +V W+MYKKA+ASFWTAEE+DL++D++
Sbjct: 148 KRAEINGEHAD-EPLLMDNPNRFVLFPIQDNEVRIWQMYKKAEASFWTAEEIDLAEDLKD 206
Query: 72 WERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEM 131
W+ L ++E+HF+SH+LAFFAASDGIV ENL F ++Q EAR FYGFQIA+ENIHSE
Sbjct: 207 WDGLTNNERHFVSHILAFFAASDGIVNENLCGNFATEVQSAEARCFYGFQIAVENIHSET 266
Query: 132 YSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIF 190
YSLL++TYIKD +K L NAIE +PCV +KA WAL W S SFAER + FA VEGIF
Sbjct: 267 YSLLIDTYIKDQADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCIAFAAVEGIF 326
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHE 250
FSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS L ++ ++ +V
Sbjct: 327 FSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPESRIVEIVTH 386
Query: 251 AVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCS 294
AVEIE +FV +ALP LIGMNS LM QYI+F ADRLL H CS
Sbjct: 387 AVEIEKEFVVDALPVELIGMNSGLMCQYIEFCADRLL-HALGCS 429
>gi|325558427|gb|ADZ29806.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 202/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E IL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 16 EQILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLI 277
>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 413
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/279 (60%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E +EP+L+E +R+ MFPIRY ++W YKKA+ASFWTAEE+DLS+D+ W +L ++E++
Sbjct: 87 EAEEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERY 146
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL F ++Q+PEA++FYGFQI MENIHSE YSLL+ETYIK
Sbjct: 147 FISRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIK 206
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D +E LFNAI NIPC+ +KA WA+ WI ++ + ERLV FA VEGIFFSGSF +IFW
Sbjct: 207 DPQEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFW 266
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ R + V ++ EAV++E ++
Sbjct: 267 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVERIITEAVDVEKEYFT 326
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN +LM QYI+FVADRLL+ + ++ +
Sbjct: 327 DALPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVT 365
>gi|388522397|gb|AFK49260.1| unknown [Lotus japonicus]
Length = 218
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/215 (81%), Positives = 192/215 (89%), Gaps = 5/215 (2%)
Query: 1 MGSLKNETENEVNQRE----QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
MGSL+N + +++ Q E E E QEPILMEQ QRFCMFPIRYKQVWEMYKKA AS
Sbjct: 1 MGSLENGPARKETKQQLVPAQTEHEHE-QEPILMEQTQRFCMFPIRYKQVWEMYKKAPAS 59
Query: 57 FWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
FWTAEEVDL+ DVQHW L +SEKHFI+HVLAFFAASDGIVLENLAARFLND+QIPEARA
Sbjct: 60 FWTAEEVDLTYDVQHWATLSNSEKHFITHVLAFFAASDGIVLENLAARFLNDVQIPEARA 119
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
FYGFQIAMENIHSEMYSLLLET IKDS+EKHRLFNAIEN+PCVA+KA+WAL+WI+SS SF
Sbjct: 120 FYGFQIAMENIHSEMYSLLLETLIKDSREKHRLFNAIENLPCVARKAEWALNWINSSTSF 179
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLT 211
AERLV FAC+EGIFFSGSFC+IFWLKKRGLMPGLT
Sbjct: 180 AERLVAFACIEGIFFSGSFCSIFWLKKRGLMPGLT 214
>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 201/262 (76%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFF ASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
ribonucleotide reductase r2 subunit 1, putative;
ribonucleotide reductase small subunit 1, putative
[Candida dubliniensis CD36]
gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
[Candida dubliniensis CD36]
Length = 413
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 167/279 (59%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E +EP+L+E +R+ MFPIRY ++W YKKA+ASFWTAEE+DLS+D+ W +L ++E++
Sbjct: 87 EAEEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERY 146
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F+S VLAFFAASDGIV ENL F ++Q+PEA++FYGFQI MENIHSE YSLL+ETYIK
Sbjct: 147 FVSRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIK 206
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D +E LFNAI NIPC+ +KA WA+ WI ++ + ERLV FA VEGIFFSGSF +IFW
Sbjct: 207 DPQEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFW 266
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ R + V ++ EAV++E ++
Sbjct: 267 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVEKIITEAVDVEKEYFT 326
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN +LM QYI+FVADRLL+ + ++ +
Sbjct: 327 DALPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVT 365
>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
Length = 374
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 216/264 (81%), Gaps = 2/264 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFIS 84
EP+L E +RF +FPI+Y +W+ YK+A+ASFWT EEVDLS+D+ W+ L+S E++FIS
Sbjct: 55 EPLLQENPRRFVVFPIQYPDIWDKYKQAEASFWTTEEVDLSKDLDDWKNKLNSDERYFIS 114
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIA+ENIHSEMYS+L+ETYI + +
Sbjct: 115 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAIENIHSEMYSMLIETYISEPQ 174
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK LFNAIE +PCV +KA WAL WI+S + +F ER+V FA VEGIFFSGSF +IFWLKK
Sbjct: 175 EKEFLFNAIETLPCVKKKADWALLWINSKNATFGERIVAFAAVEGIFFSGSFASIFWLKK 234
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
R LMPGLTFSNELISRDEGLHCDFACL++S L ++ +++ ++ +AV+IE +F+ EAL
Sbjct: 235 RNLMPGLTFSNELISRDEGLHCDFACLMFSHLVQKPSKERIQSIIQDAVKIEKEFLTEAL 294
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P ++IGMN +LM QYI+FVADRLL
Sbjct: 295 PVSMIGMNCALMCQYIEFVADRLL 318
>gi|221120499|ref|XP_002159812.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Hydra magnipapillata]
Length = 387
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/264 (65%), Positives = 210/264 (79%), Gaps = 2/264 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EP+L E +RF +FPI+YK +W+MYK+A+ASFWT EEVDL+ D HWE +L EK+FIS
Sbjct: 60 EPLLRENPRRFVLFPIQYKDIWKMYKQAEASFWTVEEVDLAADAVHWEEKLKPQEKYFIS 119
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL F ++Q+PEARAFYGFQIA+ENIHSEMYSLL++T IKD
Sbjct: 120 HVLAFFAASDGIVNENLVECFSQEVQLPEARAFYGFQIAIENIHSEMYSLLIDTLIKDPI 179
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK LFNAIE +PCV +KA WAL WI+ SF+ER+V FA VEGIFFSGSF AIFWLKK
Sbjct: 180 EKSNLFNAIETMPCVQKKAVWALKWINKDCASFSERVVAFAAVEGIFFSGSFAAIFWLKK 239
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
R L+PG+TFSNELISRDEGLHCDFACL+Y + + ++V ++ +AV IE +F+ E+L
Sbjct: 240 RNLLPGVTFSNELISRDEGLHCDFACLMYKHIVNKPSEERVKQIIRDAVAIEIEFLTESL 299
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
PC L+GMN SLM YI+F ADRL+
Sbjct: 300 PCDLLGMNKSLMKTYIEFCADRLI 323
>gi|366992756|ref|XP_003676143.1| hypothetical protein NCAS_0D02000 [Naumovozyma castellii CBS 4309]
gi|342302009|emb|CCC69781.1| hypothetical protein NCAS_0D02000 [Naumovozyma castellii CBS 4309]
Length = 399
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/271 (62%), Positives = 215/271 (79%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E QEP+L R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ +
Sbjct: 70 KETEQQEPLLNADEDRHTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNPN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++Q+PEARAFYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSAEVQVPEARAFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIE IP + +KA+WAL WI+ +++ FAERLV FA +EGIFFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIETIPQIKEKAEWALRWINDAEALFAERLVAFAAIEGIFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ ++ V ++ EAVEIE +
Sbjct: 250 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKVDPSTVERIIVEAVEIEKR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
Length = 333
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFW EEVD+S+D+ W +L EK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWIVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M Y++FVADRL+
Sbjct: 256 KLIGMNCEMMKTYMEFVADRLI 277
>gi|343084827|ref|YP_004774122.1| ribonucleotide reductase [Cyclobacterium marinum DSM 745]
gi|342353361|gb|AEL25891.1| ribonucleotide reductase [Cyclobacterium marinum DSM 745]
Length = 326
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 215/267 (80%), Gaps = 3/267 (1%)
Query: 26 EPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EPIL + N RF +FPI++ +W+ YKKA+ASFWTAEE+DL QD+ W+ L D E+HFIS
Sbjct: 4 EPILEQGDNSRFVLFPIQHDDIWKYYKKAEASFWTAEEIDLGQDLNDWKNLSDGERHFIS 63
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F+ ++Q EA+ FYGFQIAMENIHSE YSLL++TYIK+ +
Sbjct: 64 HVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPE 123
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ LFNAIE++ CV +KA+WAL WI + F ERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 ERDHLFNAIEHLDCVKKKAEWALRWIDKGN-FMERLIAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFAC LY+ L +L ++V ++ +AVEIE +FV +AL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACHLYTKHLVNKLPQEQVTQIIKDAVEIEKEFVTDAL 242
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMNS LM QYI+FVADRLL+ +
Sbjct: 243 PVRLIGMNSELMCQYIEFVADRLLLEL 269
>gi|365984697|ref|XP_003669181.1| hypothetical protein NDAI_0C02780 [Naumovozyma dairenensis CBS 421]
gi|343767949|emb|CCD23938.1| hypothetical protein NDAI_0C02780 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/269 (63%), Positives = 214/269 (79%), Gaps = 2/269 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
+E +EP+L N R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ +E+
Sbjct: 72 EEKEEPLLTYDNDRHTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNANER 131
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
FIS VLAFFAASDGIV ENL F ++QIPEARAFYGFQI +ENIHSE YSLL++TYI
Sbjct: 132 FFISRVLAFFAASDGIVNENLVENFSAEVQIPEARAFYGFQIMIENIHSETYSLLIDTYI 191
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
KD KE LFNAIE IP + +KA+WAL WI+ S+S F ERLV FA +EGIFFSGSF +IF
Sbjct: 192 KDPKESEFLFNAIETIPQIKEKAEWALRWINDSESPFGERLVAFAAIEGIFFSGSFASIF 251
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ ++ V ++ +AVEIE ++
Sbjct: 252 WLKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKIEPSTVETIIVQAVEIEKRYF 311
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|391328598|ref|XP_003738774.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Metaseiulus occidentalis]
Length = 374
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 207/268 (77%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E RF +FPI Y +W MYKKAQASFWTAEEVDL +D+ W ++ E+ FI
Sbjct: 53 ESEPLLRENPNRFVLFPIEYPDIWRMYKKAQASFWTAEEVDLGKDMADWHKMSSQEQEFI 112
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENL RF ++Q+ EAR FYGFQ+ MENIHSEMYSLLL TYI D
Sbjct: 113 KHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVMMENIHSEMYSLLLNTYITDP 172
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ LF AIE +PC+ +KA WAL+WI + + ++ ER+V FA VEGIFFSG+F +IFWLK
Sbjct: 173 MERDHLFRAIETMPCIKKKADWALNWIGNQNATYGERVVAFAAVEGIFFSGAFASIFWLK 232
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLH DFACL++ L ++ ++++ ++ AV IE +F+ EA
Sbjct: 233 KRGLMPGLTFSNELISRDEGLHTDFACLMFRHLVQKPSVERIYEIIRNAVAIEQEFLTEA 292
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LPCA++GMN LM QYI+FVADRLLV +
Sbjct: 293 LPCAMLGMNCDLMKQYIEFVADRLLVEL 320
>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
Length = 426
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 212/266 (79%), Gaps = 3/266 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ-DVQHWERLLDS-EKHFI 83
EP+L E RF +FPI+Y +WEMYKKA ASFWT EEV L + D + W+ L+S EK+FI
Sbjct: 100 EPLLQEGPNRFVIFPIQYPDIWEMYKKAVASFWTIEEVPLHKLDKKDWDEKLNSDEKYFI 159
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF +++I EAR FYGFQIA+ENIHSEMYSLL+ETYI D
Sbjct: 160 SHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYSLLIETYISDP 219
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KEK LFNAIE +PCV +KAKWAL+WI H S +F ER++ FA VEGIFFSGSF AIFWLK
Sbjct: 220 KEKDFLFNAIETLPCVGKKAKWALNWINHESATFPERVIAFAAVEGIFFSGSFAAIFWLK 279
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG+MPGLTFSNELISRDEGLHCDFACL++ + ++ ++ V ++ +AVEIE +F+ +A
Sbjct: 280 KRGVMPGLTFSNELISRDEGLHCDFACLIFKHIIQKPSFEHVKSIIMDAVEIEKEFLTQA 339
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLV 288
LP LIGMN SLM YI+FVADRL V
Sbjct: 340 LPVELIGMNCSLMCNYIEFVADRLFV 365
>gi|338209704|ref|YP_004653751.1| ribonucleoside-diphosphate reductase [Runella slithyformis DSM
19594]
gi|336303517|gb|AEI46619.1| Ribonucleoside-diphosphate reductase [Runella slithyformis DSM
19594]
Length = 331
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/267 (63%), Positives = 215/267 (80%), Gaps = 2/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L+E RF +FPI++ +W+ YK +A+FWTAEE+DL+ D+Q W++L D E+HFIS
Sbjct: 9 EEPLLVEDPHRFVLFPIKHHDIWQFYKNHEAAFWTAEEIDLASDMQDWDKLNDGERHFIS 68
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA FL ++Q EA+ FYGFQIAMENIHSE YSLL++TYIKD
Sbjct: 69 HVLAFFAASDGIVNENLAVNFLKEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKDPV 128
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK R+ AIE IPCV +KA+WAL WI + +FAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDRMLRAIETIPCVQKKAEWALRWI-GNGTFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLM GL+FSNELISRDEGLH DFACLLY+ + +L + V+ ++ +AV IE +FV E+L
Sbjct: 188 GLMKGLSFSNELISRDEGLHRDFACLLYTDHIVNKLPEETVYSLIKDAVAIEQEFVTESL 247
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMNS LM++YI+FVAD LL+ +
Sbjct: 248 PVSLIGMNSKLMNEYIEFVADHLLLSL 274
>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
[Cryptosporidium muris RN66]
gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Cryptosporidium muris RN66]
Length = 346
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/284 (59%), Positives = 213/284 (75%)
Query: 4 LKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
L ET E++Q + + + +EP+L + + + +W MYKK +ASFWTAEE+
Sbjct: 6 LSAETSREIDQAVEKIKAMQHEEPVLSSDTRLHQIIKSEIEVMWSMYKKEEASFWTAEEI 65
Query: 64 DLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIA 123
DL QD++ WE L + EKHFI +VLAFFAASDGIV+ENLA FL +IQI EAR +YGFQIA
Sbjct: 66 DLGQDMRDWESLKEPEKHFIKYVLAFFAASDGIVMENLAVNFLKEIQIEEARMYYGFQIA 125
Query: 124 MENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183
ME IHSE YSLL++ YI D K++ LF AI ++P V KAKWA W++++ SFAER++GF
Sbjct: 126 MEQIHSETYSLLIDQYISDVKDRQMLFEAISHLPAVKTKAKWATKWMNNNRSFAERIIGF 185
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
VEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEG+H DF CLLY L RL + +
Sbjct: 186 CAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGIHADFGCLLYKTLNNRLPYGR 245
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
V ++ EAVE+E F+C++LP LIGMNS LM+QYI+FVADRLL
Sbjct: 246 VQEIIAEAVEVERAFLCDSLPVDLIGMNSRLMAQYIEFVADRLL 289
>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 200/262 (76%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFF ASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGXGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>gi|341889599|gb|EGT45534.1| hypothetical protein CAEBREN_21681 [Caenorhabditis brenneri]
Length = 375
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 221/293 (75%), Gaps = 8/293 (2%)
Query: 7 ETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLS 66
ET+ EVN + E P+L + + RF +FP+RY ++W+ YKKA ASFWT EEVDL
Sbjct: 44 ETKEEVNALDANE-------PLLQDLDNRFVIFPLRYHEIWQFYKKAVASFWTVEEVDLG 96
Query: 67 QDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMEN 126
+D+ WE++ E++FIS VLAFFAASDGIV ENL RF N++++ EAR FYGFQIA+EN
Sbjct: 97 KDMNDWEKMNGDEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIEN 156
Query: 127 IHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFAC 185
IHSEMYS L+ETYI+D +E+H+LFNAI + +KA WAL WI SFAERL+ FA
Sbjct: 157 IHSEMYSKLIETYIRDEQERHKLFNAIFEFEFIKKKADWALKWISDQKASFAERLIAFAA 216
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
VEGIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS+L+ +L ++++
Sbjct: 217 VEGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIY 276
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
++ +AV+IE +F+ EALP +IGMN LMSQYI+FVAD LL + LF +
Sbjct: 277 EIISDAVKIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLAELGCDKLFKV 329
>gi|374724341|gb|EHR76421.1| ribonucleoside-diphosphate reductase beta chain [uncultured marine
group II euryarchaeote]
Length = 348
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/276 (62%), Positives = 211/276 (76%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
QE EP+L E RF +FPI++ +WEMYK+ A FWTAEE+DL++D++ W+ L E+H
Sbjct: 21 QEHLEPMLQENLDRFVLFPIQHSDIWEMYKQQMACFWTAEEIDLAEDLKDWKNLNADEQH 80
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F+ H+LAFFAASDGIV ENL F N++ PEARAFYGFQI MENIH+E YSLL++TYIK
Sbjct: 81 FLKHILAFFAASDGIVNENLGINFSNEVCWPEARAFYGFQIMMENIHAETYSLLIDTYIK 140
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFW 200
D EK LF A+E +P V +K +WA+ W+ SFAERLV FA VEGIFFSGSFCAIFW
Sbjct: 141 DEPEKDHLFKALETVPSVKRKGEWAMRWLSRKQGSFAERLVAFAAVEGIFFSGSFCAIFW 200
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACLL++ L + K+ ++ EAV+IE +FV
Sbjct: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLHNKLLRGAGAAKITRIIAEAVDIEIEFVT 260
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
ALP +LIGMNS LM QYI+FVADRLLV + ++
Sbjct: 261 SALPVSLIGMNSILMEQYIQFVADRLLVALGASKIY 296
>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
Length = 401
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 168/279 (60%), Positives = 216/279 (77%), Gaps = 2/279 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E EP+L+E +RF +FPI+Y ++WE YK+A+ASFWTAEE+DLS+D+ W R+ ++E+
Sbjct: 73 EKDEPLLVENKRRFVLFPIKYHEIWEAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERF 132
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS +LAFFAASDGIV ENL F ++Q PEA+ FYGFQI MENIHSE YSLL++TYIK
Sbjct: 133 FISRILAFFAASDGIVNENLVENFSAEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIK 192
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAIE IP + +KA+WA+ WI D+ F ERLV FA VEG+FFSGSF AIFW
Sbjct: 193 DPKESEFLFNAIETIPQIKEKAEWAIRWIQDDDALFGERLVAFAAVEGVFFSGSFAAIFW 252
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKK+GLMPGLTFSNELI RDEGLH DFACLL++ L+ + + + V ++ EAVEIE ++
Sbjct: 253 LKKKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPNPEIVEKIITEAVEIEKRYFM 312
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ALP +L+GMN+ LM+QY++FVADRLLV + F +
Sbjct: 313 DALPVSLLGMNADLMNQYVEFVADRLLVALGNKKYFNVT 351
>gi|386783387|pdb|4DJN|A Chain A, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
gi|386783388|pdb|4DJN|B Chain B, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
Length = 311
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+ YK+AQASFWTAEEVDLS+
Sbjct: 3 QDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKXYKQAQASFWTAEEVDLSK 62
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 63 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 122
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSE YSLL++TYI+D K++ LFNAIE P V +KA WAL WI S F ER+V FA V
Sbjct: 123 HSEXYSLLIDTYIRDPKKREFLFNAIETXPYVKKKADWALRWIADRKSTFGERVVAFAAV 182
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGL PGLTFSNELISRDEGLHCDFACL + L + ++V
Sbjct: 183 EGVFFSGSFAAIFWLKKRGLXPGLTFSNELISRDEGLHCDFACLXFQYLVNKPSEERVRE 242
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIG N L QYI+FVADRLLV + +F
Sbjct: 243 IIVDAVKIEQEFLTEALPVGLIGXNCILXKQYIEFVADRLLVELGFSKVF 292
>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
Length = 418
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 165/265 (62%), Positives = 206/265 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E NQRF +FPI+Y +W MYKKA ASFWT EEVDL +D+ W++L E+ FI H
Sbjct: 94 EPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKKLKKEEQFFIKH 153
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF+++IQIPEAR+FYGFQI MENIHSEMY+ L+E + D+KE
Sbjct: 154 VLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKE 213
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNAIE +P + +KA WAL WI + ++ R++ FA VEGIFFSGSF AIFWLKKRG
Sbjct: 214 KMGLFNAIETMPAIKKKADWALKWIGADAPYSVRVIAFAAVEGIFFSGSFAAIFWLKKRG 273
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPG+TFSNELISRDEGLH DFACL+Y + ++ +++ ++ +AV IE +F+ +ALP
Sbjct: 274 LMPGVTFSNELISRDEGLHTDFACLMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPV 333
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LM YI+FVADRLLV +
Sbjct: 334 RLIGMNCDLMKTYIEFVADRLLVEL 358
>gi|375013326|ref|YP_004990314.1| ribonucleotide reductase subunit beta [Owenweeksia hongkongensis
DSM 17368]
gi|359349250|gb|AEV33669.1| ribonucleotide reductase, beta subunit [Owenweeksia hongkongensis
DSM 17368]
Length = 324
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 169/268 (63%), Positives = 214/268 (79%), Gaps = 3/268 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
QEPIL E R+ +FPI + +WE YKK +ASFWTAEE+DL QD+ WE +L D E++FI
Sbjct: 4 QEPILQENKNRYVLFPIEHHDIWEWYKKQEASFWTAEEIDLHQDLTDWENKLNDDERYFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TYIKD
Sbjct: 64 KHVLAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMMENIHSETYSLLIDTYIKDK 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
++++RLF A+EN P + +KA WA+ WI SDSFAERL+ FA VEGIFFSGSFC+IFWLKK
Sbjct: 124 EDRNRLFTALENFPAIKKKADWAIKWI-ESDSFAERLIAFAAVEGIFFSGSFCSIFWLKK 182
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLHCDFA L++ L ++ +++ ++ EA++IE +F+ E+
Sbjct: 183 RGLMPGLTFSNELISRDEGLHCDFAVHLHNKHLINKVPKERIRQILMEALDIEREFITES 242
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMNS LM++Y++FV DRLLV +
Sbjct: 243 LPVNLIGMNSKLMTEYLEFVTDRLLVEL 270
>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans CBS 6340]
Length = 403
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 168/282 (59%), Positives = 218/282 (77%), Gaps = 2/282 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+LME +RF +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 72 KEMEKEEPLLMENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNEN 131
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS V+AFFAASDGIV ENL F ++Q PEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 132 ERFFISRVIAFFAASDGIVNENLVENFSAEVQSPEAKCFYGFQIMMENIHSETYSLLIDT 191
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIE IP + +KA+WA+ WI D+ FAERLV FA VEG+FFSGSF A
Sbjct: 192 YIKDPKESDFLFNAIETIPQIKEKAEWAIRWIQDEDALFAERLVAFAAVEGVFFSGSFAA 251
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKK+GLMPGLTFSNELI RDEGLH DFACLL++ L+ + + ++ EAVEIE +
Sbjct: 252 IFWLKKKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIIERIITEAVEIEQR 311
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ +ALP +L+GMN+ LM+QY++FVADRLLV + + +
Sbjct: 312 YFRDALPVSLLGMNADLMNQYVEFVADRLLVALGNQKFYNVT 353
>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
gi|349579170|dbj|GAA24333.1| K7_Rnr2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 399
Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 399
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
gi|1172946|sp|P09938.2|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
AltName: Full=Ribonucleotide reductase R2 subunit 1;
AltName: Full=Ribonucleotide reductase small subunit 1
gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
cerevisiae]
gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
gi|392298407|gb|EIW09504.1| Rnr2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 399
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
gi|365764844|gb|EHN06363.1| Rnr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain, partial [Ascaris
suum]
Length = 376
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 217/293 (74%), Gaps = 4/293 (1%)
Query: 8 TENEVNQREQGEQEQEDQE---PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVD 64
+EN ++ ++ D+E P+L RF +FPI+Y +W+ YK+A ASFWT EEVD
Sbjct: 36 SENSTTRKAPEVTDKGDEEVVEPLLANNPNRFVIFPIKYHDIWDFYKRAVASFWTVEEVD 95
Query: 65 LSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
LS+D QHWE L D E+ FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +
Sbjct: 96 LSKDYQHWENLSDGERFFISRVLAFFAASDGIVNENLVERFAQEVQVPEARFFYGFQIMI 155
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGF 183
ENIHSEMYS ++ETYI+D E+ +LFNAI + +KA WAL WI + +AERL+ F
Sbjct: 156 ENIHSEMYSKMVETYIRDDNERKKLFNAINEFEFIKKKADWALKWIADKQAPYAERLIAF 215
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243
A VEGIFFSGSF AIFWLKKRGLMPGLT SNELISRDEGLH DFACL++S L+K+ + ++
Sbjct: 216 AAVEGIFFSGSFAAIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLMFSHLKKKPNKER 275
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ ++ EAV+IE +++ EALP LIGMN LMSQYI++VAD LL + L+
Sbjct: 276 IYEIIREAVKIEQEYLTEALPVGLIGMNCELMSQYIEYVADHLLTELKCPKLY 328
>gi|428672848|gb|EKX73761.1| ribonucleoside-diphosphate reductase small chain, putative [Babesia
equi]
Length = 335
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/268 (62%), Positives = 205/268 (76%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+ E E +L R ++PI++ WE YKKAQASFWTAEE+D S D+ HW +L E
Sbjct: 11 KANEADEFLLNPDPLRIGLYPIKFPDFWEWYKKAQASFWTAEEIDFSLDLAHWNKLTSDE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFIS+VLAFFAASDGIVLENLA +FL D+++PEA++FY FQIA+ENIHSE YSLL+E Y
Sbjct: 71 RHFISNVLAFFAASDGIVLENLALKFLRDVKLPEAQSFYSFQIAVENIHSETYSLLIENY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
IKD E+ RLF AI+ I V KA WA WI +++FAER+V +A VEGI FSGSFCA+F
Sbjct: 131 IKDEAERTRLFRAIDTIQAVKDKANWAAKWITENNAFAERIVAYAAVEGILFSGSFCALF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEGLH DF C +Y L+ +L + V ++ EAV +E F+
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHADFGCFIYQNLKHKLPNEAVQQIIKEAVIVERSFI 250
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLL 287
C++LPC LIGMNS LM QYI+FVADRLL
Sbjct: 251 CDSLPCDLIGMNSQLMIQYIEFVADRLL 278
>gi|365759956|gb|EHN01709.1| Rnr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEQEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
Length = 399
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 165/265 (62%), Positives = 206/265 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E NQRF +FPI+Y +W MYKKA ASFWT EEVDL +D+ W++L E+ FI H
Sbjct: 58 EPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKKLKKEEQFFIKH 117
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF+++IQIPEAR+FYGFQI MENIHSEMY+ L+E + D+KE
Sbjct: 118 VLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKE 177
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNAIE +P + +KA WAL WI + ++ R++ FA VEGIFFSGSF AIFWLKKRG
Sbjct: 178 KMGLFNAIETMPAIKKKADWALKWIGADAPYSVRVIAFAAVEGIFFSGSFAAIFWLKKRG 237
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPG+TFSNELISRDEGLH DFACL+Y + ++ +++ ++ +AV IE +F+ +ALP
Sbjct: 238 LMPGVTFSNELISRDEGLHTDFACLMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPV 297
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LM YI+FVADRLLV +
Sbjct: 298 RLIGMNCDLMKTYIEFVADRLLVEL 322
>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
Length = 319
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/271 (64%), Positives = 213/271 (78%), Gaps = 2/271 (0%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHV 86
+L + RF +FPI + +W+MYK+A+ASFWTAEEVDL DVQHW+ +L D E+HFI HV
Sbjct: 1 MLAVNSLRFVLFPIEHDDIWQMYKQAEASFWTAEEVDLCHDVQHWDTKLNDKERHFIKHV 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIV ENLA F ++Q PEAR FYGFQIA+ENIHSE+YSLL++TYI+D+++K
Sbjct: 61 LAFFAASDGIVNENLAQNFATEVQWPEARCFYGFQIAIENIHSEVYSLLIDTYIRDAQKK 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
H AI+ +PCVA+KA+WAL W SF ERL+ FA VEGIFFSGSFCA+FWLKKRG
Sbjct: 121 HECLTAIDTMPCVAEKAQWALRWCDPDHASFTERLLAFAAVEGIFFSGSFCAVFWLKKRG 180
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGL+FSNELI+RDEGLHCDFACLLYS LRK+L +V +V AV+IE FV ALP
Sbjct: 181 LMPGLSFSNELIARDEGLHCDFACLLYSKLRKKLSDVQVASIVGAAVDIEKSFVVSALPV 240
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMNS M +YI+F ADRLL+ + +L+
Sbjct: 241 ELIGMNSKSMCKYIEFCADRLLLELGYSTLY 271
>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
Length = 412
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/273 (60%), Positives = 216/273 (79%), Gaps = 2/273 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L+E +RF +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W ++ +
Sbjct: 83 KEMEKDEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLDDWNNKMSEG 142
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E++FIS VLAFFAASDGIV ENL F ++QIPEA+ FYGFQI MENIHSE YSLL++T
Sbjct: 143 ERYFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDT 202
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
Y +D++E LFNAIENIP + +KA+WA+ WI + +AERLV FA VEG+FFSGSF A
Sbjct: 203 YSRDTEESEFLFNAIENIPPIKEKAEWAIRWIQDDTALYAERLVAFAAVEGVFFSGSFAA 262
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKK+GLMPGLTFSNELI RDEGLH DFACLL++ L+ R V ++ EAV IE +
Sbjct: 263 IFWLKKKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNRPSPDIVERIITEAVSIEKR 322
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ +ALP AL+GMN++LM+QY++FVADRLLV +
Sbjct: 323 YFEDALPVALLGMNAALMNQYVEFVADRLLVAL 355
>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
Length = 419
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 90 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 149
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 150 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 209
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 210 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 269
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 270 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 329
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 330 YFLDALPVALLGMNADLMNQYVEFVADRLLV 360
>gi|408684509|gb|AFU76948.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408684676|gb|AFU77114.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408684843|gb|AFU77280.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685011|gb|AFU77447.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685516|gb|AFU77949.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686019|gb|AFU78449.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686356|gb|AFU78784.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686691|gb|AFU79117.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686859|gb|AFU79284.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687195|gb|AFU79618.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687363|gb|AFU79785.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687530|gb|AFU79951.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687698|gb|AFU80118.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687866|gb|AFU80285.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408688034|gb|AFU80452.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408688203|gb|AFU80620.1| small subunit ribonucleotide reductase [Myxoma virus]
Length = 322
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/274 (62%), Positives = 209/274 (76%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E R+ +FPI+Y +W MYKKA ASFWT EEVD+S+D++ W L EK+FI
Sbjct: 2 EDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYI D
Sbjct: 62 KHILAFFAASDGIVNENLAERFYAEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIIDL 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
+EK +LF AIE + C+ QKA+W WI + D ++AERL+ FA VEGIFFSGSF AIFWLK
Sbjct: 122 QEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWLK 181
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG MPGLTFSNELISRDEGLHCDFACL++ L+ ++V ++ EAV IE +F+ EA
Sbjct: 182 KRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTEA 241
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN LM QYI+FVADRL+ + +F
Sbjct: 242 LPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF 275
>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
brasiliensis Pb18]
Length = 325
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/255 (67%), Positives = 207/255 (81%), Gaps = 2/255 (0%)
Query: 44 KQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLA 102
KQ+W+MYKKA+ASFWTAEEVDLS+D+ W RL D E++FISHVLAFFAASDGIV ENL
Sbjct: 9 KQIWQMYKKAEASFWTAEEVDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLV 68
Query: 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQK 162
RF ++Q+PEAR FYGFQI MENIHSE YSLL++TYIK+ K++ LF+AI+ IPC+ +K
Sbjct: 69 ERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKK 128
Query: 163 AKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
A WA+ WI +S FA+RLV FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDE
Sbjct: 129 ADWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDE 188
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLH DFACLL+S LR R + V ++ EAV IE +F+ +ALPCAL+GMN+ LM QYI+F
Sbjct: 189 GLHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMNAKLMCQYIEF 248
Query: 282 VADRLLVHIHQCSLF 296
VADRLLV + ++
Sbjct: 249 VADRLLVALGNKKVY 263
>gi|401625096|gb|EJS43121.1| rnr2p [Saccharomyces arboricola H-6]
Length = 399
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++Q+PEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQVPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
gi|408685181|gb|AFU77616.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685351|gb|AFU77785.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685685|gb|AFU78117.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685854|gb|AFU78285.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686189|gb|AFU78618.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686524|gb|AFU78951.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687028|gb|AFU79452.1| small subunit ribonucleotide reductase [Myxoma virus]
Length = 322
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/274 (62%), Positives = 209/274 (76%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E R+ +FPI+Y +W MYKKA ASFWT EEVD+S+D++ W L EK+FI
Sbjct: 2 EDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYI D
Sbjct: 62 KHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIIDL 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
+EK +LF AIE + C+ QKA+W WI + D ++AERL+ FA VEGIFFSGSF AIFWLK
Sbjct: 122 QEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWLK 181
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG MPGLTFSNELISRDEGLHCDFACL++ L+ ++V ++ EAV IE +F+ EA
Sbjct: 182 KRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTEA 241
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN LM QYI+FVADRL+ + +F
Sbjct: 242 LPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF 275
>gi|401841001|gb|EJT43584.1| RNR2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 367
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 38 KEMEQEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 97
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 98 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 157
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 158 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 217
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 218 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 277
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 278 YFLDALPVALLGMNADLMNQYVEFVADRLLV 308
>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides sp.
'lutzii' Pb01]
Length = 325
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/255 (66%), Positives = 207/255 (81%), Gaps = 2/255 (0%)
Query: 44 KQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLA 102
KQ+W+MYKKA+ASFWTAEE+DLS+D+ W RL D E++FISHVLAFFAASDGIV ENL
Sbjct: 9 KQIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLV 68
Query: 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQK 162
RF ++Q+PEAR FYGFQI MENIHSE YSLL++TYIK+ K++ LF+AI+ IPC+ +K
Sbjct: 69 ERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKK 128
Query: 163 AKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
A WA+ WI +S FA+RLV FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDE
Sbjct: 129 ADWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDE 188
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLH DFACLL+S LR R + V ++ EAV IE +F+ +ALPCAL+GMN+ LM QYI+F
Sbjct: 189 GLHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMNAKLMCQYIEF 248
Query: 282 VADRLLVHIHQCSLF 296
VADRLLV + ++
Sbjct: 249 VADRLLVALGNKKVY 263
>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
Length = 300
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/243 (70%), Positives = 202/243 (83%), Gaps = 1/243 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEEVDLS+D+ HWE L EKHFISHVLAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISHVLAFFAASDGIVNENLVERFSKE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD +E+ LFNAIE +PCV +KA WA+
Sbjct: 61 VQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMR 120
Query: 169 WIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI+ S S+AER+V FA VEGIFFSGSF +IFWLKKRG+MPGLTFSNELISRDEGLHCDF
Sbjct: 121 WINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++S L + +++H ++ EAV+IE F+ EALPC LIGMN LM QYI+FVADRLL
Sbjct: 181 ACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMNCDLMRQYIEFVADRLL 240
Query: 288 VHI 290
+ +
Sbjct: 241 LEL 243
>gi|403214437|emb|CCK68938.1| hypothetical protein KNAG_0B05040 [Kazachstania naganishii CBS
8797]
Length = 395
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/271 (62%), Positives = 213/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EPI++ R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ +
Sbjct: 66 KETEKEEPIMVGDKNRHTVFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNVRMNPN 125
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FIS VLAFFAASDG+V ENL F ++ IPEA+AFYGFQI +ENIHSE YSLL++T
Sbjct: 126 EKFFISRVLAFFAASDGLVNENLVENFSAEVNIPEAKAFYGFQIMIENIHSETYSLLIDT 185
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIE IP + +KA+WAL WI S+S FAERLV FA +EG+FFSGSF +
Sbjct: 186 YIKDPKESEFLFNAIETIPQIKEKAEWALRWIGDSESVFAERLVAFAAIEGVFFSGSFAS 245
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 246 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKPDPSVVERIVTEAVEIEKR 305
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 306 YFLDALPVALLGMNADLMNQYVEFVADRLLV 336
>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
T2Bo]
gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
[Babesia bovis]
Length = 339
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/265 (64%), Positives = 205/265 (77%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
+ +E IL+E R ++PI+Y WE YKKAQASFWT+EE+DLS D++ W L + E HF
Sbjct: 18 QSEEFILVEDPNRNGLYPIKYPDFWEWYKKAQASFWTSEEIDLSSDLKDWGTLTEGEHHF 77
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I +VLAFFAASDGIVLENLA RFL D+++PEA+ FY FQI +ENIHSE YSLL+E YI+D
Sbjct: 78 IKNVLAFFAASDGIVLENLALRFLKDVKLPEAKFFYCFQITVENIHSETYSLLIEQYIRD 137
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK RLF AIE I V KA WA W++ SFAER+V +A VEGIFFSGSFCAIFWLK
Sbjct: 138 EAEKDRLFRAIETIDAVRDKAIWAAKWMNDEKSFAERIVAYAAVEGIFFSGSFCAIFWLK 197
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELI+RDEGLH DF C +YS L+ +L + V ++ EAV +E FVC++
Sbjct: 198 KRGLMPGLTFSNELIARDEGLHADFGCFIYSKLKHKLPAECVQQIIKEAVAVERVFVCDS 257
Query: 263 LPCALIGMNSSLMSQYIKFVADRLL 287
LP LIGMNS LM+QYI+FVADRLL
Sbjct: 258 LPTDLIGMNSMLMAQYIEFVADRLL 282
>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
Length = 320
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 168/265 (63%), Positives = 206/265 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI+Y +W+MYK++ ASFWT EEVDLS+D+ W++L EK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFA+SDGIV ENLA RF D+Q EAR FYGFQIAMENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNAIE + CV +KA WA WI S+ + ER+V FA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + + ++ +AV IE +F+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLL +
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTEL 266
>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 399
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 166/271 (61%), Positives = 213/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASD IV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDSIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|357289644|gb|AET72957.1| ribonucleoside-diphosphate reductase small subunit [Phaeocystis
globosa virus 12T]
gi|357292439|gb|AET73775.1| ribonucleoside-diphosphate reductase small subunit [Phaeocystis
globosa virus 14T]
Length = 325
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 203/266 (76%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + RF MFPI+ ++W+MYKK Q FWT+ EVDLS+D HWE L EKHFIS
Sbjct: 7 EPLLTPDDNRFVMFPIKDDEIWQMYKKQQDLFWTSTEVDLSKDPAHWEALTGDEKHFISM 66
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIVLENL RF+ ++Q+ EARAFYG QIAMENIHS YS L++TYIKD+ +
Sbjct: 67 ILAFFAASDGIVLENLGTRFMGEVQLAEARAFYGLQIAMENIHSITYSTLIDTYIKDTVQ 126
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
KH+LFNAI PC+ +K+ WA+ WI SFA RLV FA VEGIFFSG+FC+IFWLKKR
Sbjct: 127 KHKLFNAISEFPCIKKKSDWAIKWIQDKRASFATRLVAFAVVEGIFFSGAFCSIFWLKKR 186
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
G++PGL FSNELISRDE LH +FA LL+S L + L K+ ++ EAVEIE +F+ ALP
Sbjct: 187 GILPGLCFSNELISRDEALHTEFAVLLHSKLERPLKKNKIEEIIREAVEIEVEFINSALP 246
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
C LIGMN LM +YI+FVADRL V +
Sbjct: 247 CRLIGMNDVLMQRYIEFVADRLAVQL 272
>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain [Theileria annulata]
gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain, putative [Theileria annulata]
Length = 322
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/279 (61%), Positives = 204/279 (73%), Gaps = 14/279 (5%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E +E IL R C+FPI Y WE YKKAQASFWTAEE+D S D HW +L E+HF
Sbjct: 14 EAEEFILNRNPNRTCLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDYNHWHKLNKDERHF 73
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I++VLAFFAASDGIVLENLA +FL D++IPEA++FY FQIA+ENIHSE YSLL+E Y+KD
Sbjct: 74 ITNVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVKD 133
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAE--------------RLVGFACVEG 188
EK RLF AIE I V KA WA WI +SFAE R+V +A VEG
Sbjct: 134 EAEKRRLFMAIETIDAVKDKANWAKKWITDENSFAERIVSNFKNKLINYYRIVAYAAVEG 193
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
I FSGSFCA+FWLKKRGLMPGLTFSNELI+RDEGLH DF C +Y L+ +L + V ++
Sbjct: 194 ILFSGSFCALFWLKKRGLMPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPEEAVQQII 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAV +E ++C++LPC LIGMNS LM+QYI+FVADRLL
Sbjct: 254 KEAVVVERSYICDSLPCDLIGMNSQLMTQYIEFVADRLL 292
>gi|443927278|gb|ELU45786.1| ribonucleotide reductase small subunit [Rhizoctonia solani AG-1 IA]
Length = 457
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 210/271 (77%), Gaps = 12/271 (4%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEK 80
E EP+L E +RF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W+ +L D+E+
Sbjct: 131 DEKDEPLLKESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWDNKLNDNER 190
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFISHVLAFFAASDGIV ENL RF N++Q EA ENIHSE YSLL++TYI
Sbjct: 191 HFISHVLAFFAASDGIVNENLVERFSNEVQAAEA----------ENIHSETYSLLIDTYI 240
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIF 199
K+ ++ LF+AIE IPC+ +KA WAL WI S FAERLV FA VEGIFFSGSF +IF
Sbjct: 241 KEPAQREFLFDAIETIPCIKKKADWALKWISDRRSTFAERLVAFAAVEGIFFSGSFASIF 300
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WLKKRGLMPGLTFSNELISRDEG+H DFACLL+S LRKR H + V ++ EAV IE +F+
Sbjct: 301 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRKRPHPETVRRIIVEAVAIEQEFL 360
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP LIGMN+ LM QYI+FVADRLLV +
Sbjct: 361 TDALPVGLIGMNARLMCQYIEFVADRLLVAL 391
>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 360
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 176/294 (59%), Positives = 220/294 (74%), Gaps = 13/294 (4%)
Query: 3 SLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEE 62
LK+E E +R++ E + EP L+ RF +FPI+ VW+MYKKA+ASFWTAEE
Sbjct: 32 DLKDELEMSEYKRKELSGELQ-PEPYLVANPNRFVLFPIQEHDVWQMYKKAEASFWTAEE 90
Query: 63 VDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
+DL D+ W +L D+E+HFI HVLAFFAASDGIV ENLA F N++QIPEAR FYGFQI
Sbjct: 91 LDLVHDLNDWAKLTDNERHFIKHVLAFFAASDGIVNENLAMNFSNEVQIPEARCFYGFQI 150
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182
A+ENIHSE+YSLL++TYIKD+ EK L AIE IPCV +K HS+ ERL+
Sbjct: 151 AIENIHSEVYSLLIDTYIKDAVEKDHLLRAIETIPCVQKK--------HSN----ERLLA 198
Query: 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQ 242
FA VEGIFFSGSFC++FWLKKRGLMPGL+FSNE+ISRDEG+H DFACL+YS L +L
Sbjct: 199 FAAVEGIFFSGSFCSVFWLKKRGLMPGLSFSNEMISRDEGMHTDFACLMYSKLVNKLPES 258
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+VH ++ +AV IE +FVC++LP LIGMNS+LM QYI+FVADRLL + ++
Sbjct: 259 RVHEIIRDAVAIEHEFVCDSLPVELIGMNSALMCQYIEFVADRLLYSLGVSKIY 312
>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
6918VP60-T2]
Length = 322
Score = 356 bits (913), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 170/274 (62%), Positives = 209/274 (76%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E R+ +FPI+Y +W MYKKA ASFWT EEVD+S+D++ W L EK+FI
Sbjct: 2 EDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYI +
Sbjct: 62 KHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIINL 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
+EK +LF AIE + C+ QKA+W WI + D ++AERL+ FA VEGIFFSGSF AIFWLK
Sbjct: 122 QEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWLK 181
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG MPGLTFSNELISRDEGLHCDFACL++ L+ ++V ++ EAV IE +F+ EA
Sbjct: 182 KRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTEA 241
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIGMN LM QYI+FVADRL+ + +F
Sbjct: 242 LPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF 275
>gi|403221091|dbj|BAM39224.1| ribonucleotide reductase R2 subunit/ribonucleoside-diphosphate
reductase small chain [Theileria orientalis strain
Shintoku]
Length = 352
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 204/272 (75%), Gaps = 7/272 (2%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E +E +L R +FPI Y WE YKKAQASFWTAEE+D S D+ HW +L E HF
Sbjct: 12 EAEEFLLNHNPNRTTLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDMVHWNKLTKDEHHF 71
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
IS+VLAFFAASDGIVLENLA +FL D+++PEA++FY FQIA+ENIHSE YSLL+E YIKD
Sbjct: 72 ISNVLAFFAASDGIVLENLALKFLRDVKLPEAQSFYSFQIAVENIHSETYSLLIENYIKD 131
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK+RLF AIE I V KA WA WI +SFAER+V +A VEGI FSGSFCA+FWLK
Sbjct: 132 EAEKNRLFMAIETIDAVKDKANWAKKWITDDNSFAERIVAYAAVEGILFSGSFCALFWLK 191
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELI+RDEGLH DF C +Y L+ +L + V ++ EAV +E ++C++
Sbjct: 192 KRGLMPGLTFSNELIARDEGLHADFGCYIYQNLKHKLPQEAVQQIIKEAVVVERSYICDS 251
Query: 263 LPCALIGMNSS-------LMSQYIKFVADRLL 287
LPC LIGMNS LM+QYI+FVADRLL
Sbjct: 252 LPCDLIGMNSPLNKFFLELMTQYIEFVADRLL 283
>gi|417659|sp|P32209.1|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
Length = 274
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/265 (63%), Positives = 206/265 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI+Y +W+MYK++ ASFWT EEVDLS+D+ W++L EK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFA+SDGIV ENLA RF D+Q EAR FYGFQIAMENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNAIE + CV +KA WA WI S+ + ER+V FA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + + ++ +AV IE +F+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLL +
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTEL 266
>gi|17551968|ref|NP_497821.1| Protein RNR-2 [Caenorhabditis elegans]
gi|1172941|sp|P42170.1|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3873950|emb|CAA84688.1| Protein RNR-2 [Caenorhabditis elegans]
Length = 381
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/284 (60%), Positives = 215/284 (75%), Gaps = 8/284 (2%)
Query: 8 TENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
E+EVN E + EP+L + + RF +FP+++ +W YKKA ASFWT EEVDL +
Sbjct: 51 NESEVN-------ELDADEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGK 103
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ WE++ E++FIS +LAFFAASDGIV ENL RF N++Q+ EAR FYGFQIA+ENI
Sbjct: 104 DMNDWEKMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENI 163
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACV 186
HSEMYS L+ETYI+D E++ LFNA++ + +KA WAL WI SFAERL+ FA V
Sbjct: 164 HSEMYSKLIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAV 223
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EGIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS L+K+L Q+++
Sbjct: 224 EGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYD 283
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ +AV IE +F+ EALP +IGMN LMSQYI+FVAD LLV +
Sbjct: 284 IIKDAVAIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLVEL 327
>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
cuniculus]
Length = 400
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 205/265 (77%), Gaps = 1/265 (0%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASD 94
RF + I +W KK +ASFWTAEEVDLS+D+QHWE L + E++FISHVLAFFAASD
Sbjct: 90 RFSILTIESYGIWTRNKKGEASFWTAEEVDLSKDIQHWEALKEEERYFISHVLAFFAASD 149
Query: 95 GIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE 154
GIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD KE+ LFNAIE
Sbjct: 150 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIE 209
Query: 155 NIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 213
+PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFS
Sbjct: 210 TMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFS 269
Query: 214 NELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSS 273
NELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EALP LIGMN +
Sbjct: 270 NELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMNCA 329
Query: 274 LMSQYIKFVADRLLVHIHQCSLFII 298
LM QYI+FVADRLL+ + +F +
Sbjct: 330 LMKQYIEFVADRLLLELGFSKVFRV 354
>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
Length = 352
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/300 (57%), Positives = 212/300 (70%), Gaps = 29/300 (9%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYK+AQASFWT EEVDLS+D+ HW+ L EKHFISH
Sbjct: 5 EPLLQENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDSLKPEEKHFISH 64
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+PEAR+FY +Q+ +E++HSEMYSLL+ TYI+D KE
Sbjct: 65 VLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSYQVLIESVHSEMYSLLINTYIRDLKE 124
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAI +PCV +KA WAL WI+ S S F ERLV FA VEGIFFSGSF +I+WLKKR
Sbjct: 125 REHLFNAIYTMPCVKRKADWALQWINDSTSTFGERLVAFAAVEGIFFSGSFASIYWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE--------- 255
GLMPGLT+SNELISRDEGLHC FACLLYS L K+ +V ++ +AV IE
Sbjct: 185 GLMPGLTYSNELISRDEGLHCTFACLLYSYLVKKPSEDRVKDIITKAVSIEQVGGSYRSM 244
Query: 256 -------------------TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALP LIGMN LM QYI+FVADRL + ++
Sbjct: 245 DGNKPNREVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMY 304
>gi|1710399|sp|P50649.1|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 322
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 2/262 (0%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
IL +++ RF ++PI Y V+ YKKA+A FWTAEE+D S D++ +E+L ++EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIVLENLA FL ++QI EA+ FY FQIA+ENIHSE YSLL++ YIKD KE+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA--VEIETQFVCEALPC 265
GLTFSNELISRDEGLH DF CL+YSLL +L Q V ++V EA VE+E F+CE+LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMNS LMSQYI+FVADRLL
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLL 265
>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 361
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 210/290 (72%), Gaps = 10/290 (3%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF +FPI Y +W MYKK +ASFW EEV+L D++ W +L D E+HFISH
Sbjct: 39 EPLLKDNPRRFVIFPIIYDDIWAMYKKQEASFWNVEEVNLKSDLEDWMKLTDDERHFISH 98
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQI MENIHSEMYSLL++TYI+D KE
Sbjct: 99 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIMMENIHSEMYSLLIDTYIQDPKE 158
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAIE +PCV +KA WAL WI S +F ERLV FA VEGIFFSGSF A+FWLKKR
Sbjct: 159 KDFLFNAIETMPCVKKKADWALKWISDSKATFGERLVAFAAVEGIFFSGSFAALFWLKKR 218
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACLL+ L ++ + H++ EAV IE F+ ALP
Sbjct: 219 GLMPGLTFSNELISRDEGLHTDFACLLFKHLEQKPPQAVITHIICEAVTIEQDFLTNALP 278
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFPFL 314
++GM+ M+ YI+FVADRLL + C + R+ FPF+
Sbjct: 279 VRMVGMSCEKMAVYIEFVADRLLNE--------LGC-PTVYRSSNPFPFM 319
>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
Length = 325
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/267 (62%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +ASFWTAEE+DL QD+ W +L D E++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLNDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LFNA+E P +A+K +WAL WI SDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKTELFNALEVFPAIAKKGEWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A++IE QFV E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIKEIIVDALDIERQFVTESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FVADRLLV +
Sbjct: 244 PVSLIGMNAGLMTQYLEFVADRLLVEL 270
>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
strain Muguga]
gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
[Theileria parva]
Length = 308
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/275 (61%), Positives = 204/275 (74%), Gaps = 10/275 (3%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E +E +L R +FPI Y + WE YKKAQASFWTAEE+D S D HW RL E+HF
Sbjct: 5 EAEEFLLNRNPNRTSLFPIVYPEFWEWYKKAQASFWTAEEIDFSMDYNHWHRLNKDERHF 64
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I++VLAFFAASDGIVLENLA +FL D++IPEA++FY FQIA+ENIHSE YSLL+E Y+KD
Sbjct: 65 ITNVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVKD 124
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
EK RLF AIE I V KA WA WI +SFAER+V +A VEGI FSGSFCA+FWLK
Sbjct: 125 EAEKRRLFMAIETIDAVKDKANWAKKWITDENSFAERIVAYAAVEGILFSGSFCALFWLK 184
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELI+RDEGLH DF C +Y L+ +L + V ++ EAV +E ++C++
Sbjct: 185 KRGLMPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPEEAVQQIIKEAVVVERSYICDS 244
Query: 263 LPCALIGMNS----------SLMSQYIKFVADRLL 287
LPC LIGMNS LM+QYI+FVADRLL
Sbjct: 245 LPCDLIGMNSRKKILTHCLIELMTQYIEFVADRLL 279
>gi|395802146|ref|ZP_10481399.1| ribonucleoside-diphosphate reductase [Flavobacterium sp. F52]
gi|395435387|gb|EJG01328.1| ribonucleoside-diphosphate reductase [Flavobacterium sp. F52]
Length = 325
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 214/267 (80%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +ASFWTAEE+DL QD+ W +L D E++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLNDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LFNA+E P +A+K +WAL WI SDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKTELFNALEVFPAIAKKGEWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A++IE QF+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIKEIIVDALDIERQFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN++LM+QY++FVADRLL+ +
Sbjct: 244 PVSLIGMNATLMTQYLEFVADRLLIEL 270
>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 166/213 (77%), Positives = 189/213 (88%)
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HWE L EKHFISHVLAFFAASDGIVLEN+A RF+ ++Q+ EARAFYGFQIA+ENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVE 187
HSEMYSLLLETYIKDS EK+RLF+AIE +PCVA+KA+WAL WI +SFAERL+ FACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGI 180
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIK 280
V EAVEIE +FV ++LPCAL+GMN LMSQYI+
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
Length = 400
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/271 (62%), Positives = 212/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L + R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W RL ++
Sbjct: 70 KELEKDEPLLNDDPDRLTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRLNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F + IPEA+AFYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEAVIPEAKAFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +S++ FAERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIANSEALFAERLVAFAAIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ L + + V +V EAVEIE +
Sbjct: 250 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLNHKPDPEVVERIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNAQLMNQYVEFVADRLLV 340
>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
Length = 325
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI+++ +WE YKK +A WTAEE+DL D+ W +L D EK+FI
Sbjct: 5 EPILQENKDRFVIFPIKHQDIWEWYKKQEACIWTAEEIDLHTDLNDWNNKLNDDEKYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q PEA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK++LF+AIE P + +KA+WAL WI SDSFAERL+ FA VEGIFFSGSFC+I+WLKKR
Sbjct: 125 EKNKLFHAIETFPAIKEKAQWALKWI-ESDSFAERLIAFAAVEGIFFSGSFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L+S + ++ +++ ++ +A+ IE QF+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHSHHIVNKVPKERITEIIVDALNIERQFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN++LM+QY++FV DRLLV +
Sbjct: 244 PVSLIGMNATLMTQYLEFVTDRLLVEL 270
>gi|367002221|ref|XP_003685845.1| hypothetical protein TPHA_0E03210 [Tetrapisispora phaffii CBS 4417]
gi|357524144|emb|CCE63411.1| hypothetical protein TPHA_0E03210 [Tetrapisispora phaffii CBS 4417]
Length = 401
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 167/281 (59%), Positives = 216/281 (76%), Gaps = 2/281 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E EP+L+E + R ++PI+Y V+E YK+A+ASFWTAEE+DL +D+ W R+ ++
Sbjct: 71 KELEKSEPLLVEDDSRKVLYPIKYPDVYEAYKRAEASFWTAEEIDLGKDLHDWNNRMNEN 130
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FIS VLAFFAASDGIV ENL F + +IPEA+ FYGFQI +ENIHSE YSLL++T
Sbjct: 131 EKFFISRVLAFFAASDGIVNENLTENFSVEAKIPEAKLFYGFQIMIENIHSETYSLLIDT 190
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
Y+KD KE LFNAIE IP + +KA+WAL WI+ S++ FAERLV FA +EG+FFSGSF +
Sbjct: 191 YVKDPKESQFLFNAIETIPQIKEKAEWALRWINDSEALFAERLVAFAAIEGVFFSGSFAS 250
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFAC+L+S ++ + + V +V EAVEIE +
Sbjct: 251 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACILFSHIKNKPSPEIVEKIVTEAVEIEKR 310
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
+ +ALP +L+GMN+ LM+QY++FVADRLLV F +
Sbjct: 311 YFLDALPVSLLGMNADLMNQYVEFVADRLLVAFGNKKYFKV 351
>gi|365961083|ref|YP_004942650.1| ribonucleoside-diphosphate reductase [Flavobacterium columnare ATCC
49512]
gi|365737764|gb|AEW86857.1| ribonucleoside-diphosphate reductase [Flavobacterium columnare ATCC
49512]
Length = 325
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 167/273 (61%), Positives = 217/273 (79%), Gaps = 3/273 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +ASFWTAEE+DL QD+ W +L + EK+FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTKLSEDEKYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q PEA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKDDV 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF+AIE P + +KA+WAL WI SSDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDQLFHAIEVFPAIKKKAEWALRWI-SSDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVTKERITEIIVDALNIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
P +LIGMN+ LM+QY++FVADRLL+ + +F
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLIELGCAKIF 276
>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 166/213 (77%), Positives = 189/213 (88%)
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HWE L EKHFISHVLAFFAASDGIVLEN+A RF+ ++Q+ EARAFYGFQIA+ENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVE 187
HSEMYSLLLETYIKDS EK+RLF+AIE +PCVA+KA+WAL WI +SFAERL+ FACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLGEERVKGI 180
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIK 280
V EAVEIE +FV ++LPCAL+GMN LMSQYI+
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|399033617|ref|ZP_10732239.1| ribonucleotide reductase, beta subunit [Flavobacterium sp. CF136]
gi|398068052|gb|EJL59513.1| ribonucleotide reductase, beta subunit [Flavobacterium sp. CF136]
Length = 325
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 166/267 (62%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +ASFWTAEE+DL QD+ W +L D E++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLSDEERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LFNA+E P + +KA+WAL WI SDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKAELFNALEVFPAIKKKAEWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A++IE +FV E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVSKERIKEIIVDALDIEREFVTESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FVADRLLV +
Sbjct: 244 PVSLIGMNAGLMTQYLEFVADRLLVEL 270
>gi|426223128|ref|XP_004005729.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Ovis
aries]
Length = 297
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/251 (67%), Positives = 202/251 (80%), Gaps = 1/251 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWEALKPEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+QI EAR FYGFQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALR 120
Query: 169 WIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI + ++ ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + Q+V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL+
Sbjct: 181 ACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 288 VHIHQCSLFII 298
+ + +F +
Sbjct: 241 LELGFSKVFKV 251
>gi|386819559|ref|ZP_10106775.1| ribonucleotide reductase, beta subunit [Joostella marina DSM 19592]
gi|386424665|gb|EIJ38495.1| ribonucleotide reductase, beta subunit [Joostella marina DSM 19592]
Length = 326
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +A FWTAEE+DL QD+ W +L D E++FI
Sbjct: 6 EPILQENKDRFVIFPIQHHDIWEWYKKQEACFWTAEEIDLHQDLTDWNNKLNDDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+K+ K
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKNEK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF AIEN P + +KA WAL WI S SFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKGQLFKAIENFPAIKKKADWALKWIESP-SFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L+ ++ +++ ++ EA++IE +F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDFAVHLHNTHLKNKVSKERIKEIIVEALDIEREFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FV DRLLV +
Sbjct: 245 PASLIGMNAKLMTQYLEFVTDRLLVEM 271
>gi|397643211|gb|EJK75718.1| hypothetical protein THAOC_02551 [Thalassiosira oceanica]
Length = 466
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 164/276 (59%), Positives = 214/276 (77%), Gaps = 2/276 (0%)
Query: 23 EDQEPILMEQN-QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EK 80
+++EPI ++ + +RF +FPI Y +W +YK+ ASFWTA+E+DLS D+ HW L+S E+
Sbjct: 133 DEREPICVDDDGRRFSLFPIEYPDLWSLYKQHVASFWTADEIDLSADLTHWNNKLNSDER 192
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFIS VLAFFA +DGIV+ENL RF ++ +PEAR FYGFQ+AME+IH E YSLL+++YI
Sbjct: 193 HFISMVLAFFAGADGIVMENLVERFCREVTVPEARCFYGFQMAMESIHQETYSLLIDSYI 252
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFW 200
D KE+ LF+A +P V +KA WA +I S+ +FAERL+ FA VEGIFFSGSFCAIFW
Sbjct: 253 DDPKEREVLFSAHSTVPSVERKAIWAQKYIGSNATFAERLIAFATVEGIFFSGSFCAIFW 312
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHC FAC LYS L+ +L + ++ ++ EAV++E F+C
Sbjct: 313 LKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLKNKLTQEHINRIIREAVDVEKSFIC 372
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ALP +LIGMNS LM QYI+FVADR+L + L+
Sbjct: 373 DALPVSLIGMNSGLMGQYIEFVADRMLTDLGYEPLY 408
>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
Length = 322
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 168/274 (61%), Positives = 207/274 (75%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E R+ +FPI+Y +W+MYKKA ASFWT EEVD+S+D++ W L EK+FI
Sbjct: 2 EDEPVLKESLDRYVVFPIQYNDIWKMYKKAVASFWTPEEVDISKDLKDWHILTSDEKYFI 61
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA RF ++QI EAR FYGFQIA+ENIHSEMYSLL++TYI D
Sbjct: 62 KHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAIENIHSEMYSLLIDTYIIDI 121
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
+EK +LF AIE + C+ QKA+W WI + D ++AERL+ FA VEGIFFSGSF AIFWLK
Sbjct: 122 QEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWLK 181
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRG MPGLTFSNELISRDEGLHCDFACL++ L + ++ EAV IE QF+ +A
Sbjct: 182 KRGKMPGLTFSNELISRDEGLHCDFACLMFKHLNHTPSETRATDIIKEAVVIEQQFLTKA 241
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP LIG+N LM QYI+FVADRL+ + +F
Sbjct: 242 LPVRLIGINCDLMCQYIEFVADRLVTELGYSKIF 275
>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
Length = 321
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 208/272 (76%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L+E N RF +FPI Y +W MYKKA ASFWT EEVDLS+D+ W++L D+E++FI +
Sbjct: 2 EPLLVESNNRFVIFPIVYNDIWIMYKKAVASFWTTEEVDLSKDLLDWKKLTDNERYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIA+ENIHSEMYSLL++TYI D E
Sbjct: 62 ILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K+ L AI+ I CV +KAKWA WI + S+ ERLV FA VEGIFFSG+F +IFWLKKR
Sbjct: 122 KNHLLKAIDTIDCVKEKAKWAEKWILDKESSYGERLVAFAAVEGIFFSGAFASIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L + ++ +++ EAV IE F+ ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKQLLHPPNPSRIINIIVEAVSIEKSFLTTALP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN LM QYI+FVADRLL + +F
Sbjct: 242 VKLIGMNCELMCQYIEFVADRLLSELGCTKIF 273
>gi|374596274|ref|ZP_09669278.1| ribonucleotide reductase [Gillisia limnaea DSM 15749]
gi|373870913|gb|EHQ02911.1| ribonucleotide reductase [Gillisia limnaea DSM 15749]
Length = 325
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFIS 84
EPIL E RF +FPI++ +W+ YKK +ASFWTAEE+DL QD W L++ E++FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDANDWNNKLNADERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF AIE P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFRAIETFPAIKKKADWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNKHLVNKVPKERIREIIMDALNIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FVADRLLV +
Sbjct: 244 PASLIGMNAKLMTQYLEFVADRLLVEL 270
>gi|384096999|ref|ZP_09998120.1| ribonucleoside-diphosphate reductase small chain, partial
[Imtechella halotolerans K1]
gi|383836967|gb|EID76367.1| ribonucleoside-diphosphate reductase small chain, partial
[Imtechella halotolerans K1]
Length = 337
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/267 (62%), Positives = 210/267 (78%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++K +WE YKK +A FWTAEE+DL QD+ W +L D E++FI
Sbjct: 17 EPILQENKDRFVIFPIQHKDIWEWYKKQEACFWTAEEIDLHQDLTDWNNKLSDDERYFIK 76
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 77 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 136
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+ LF AIEN P + +KA WAL WI S SFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 137 EKNILFKAIENFPAIKKKADWALKWIESP-SFAERLIAFAAVEGIFFSGAFCSIFWLKKR 195
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L + +++ ++ +A+ IE +F+ E+L
Sbjct: 196 GLMPGLTFSNELISRDEGMHCDFAVHLHNNHLISPVSKERIKEIIVDALNIEREFITESL 255
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMNS LM+QY++FV DRLLV +
Sbjct: 256 PVSLIGMNSKLMTQYLEFVTDRLLVEL 282
>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
Length = 400
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/281 (60%), Positives = 216/281 (76%), Gaps = 2/281 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E+E +EP+L+ R +FPI+Y ++E YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 69 KEKETEEPLLVADPNRKILFPIQYPDIYEAYKRAEASFWTAEEIDLSKDLHDWNNRMNEN 128
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F + QI EA+ FYGFQI +ENIHSE YSLL++T
Sbjct: 129 ERFFISRVLAFFAASDGIVNENLTENFSVEAQILEAKCFYGFQIMIENIHSETYSLLIDT 188
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAIE IP + +KA+WAL WI+ S++ FAERLV FA +EG+FFSGSF +
Sbjct: 189 YIKDPKESQYLFNAIETIPQIKEKAEWALRWINDSEALFAERLVAFAAIEGVFFSGSFAS 248
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL+S ++ + V +V EAVEIE +
Sbjct: 249 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHIKNKPDPAIVEKIVTEAVEIEKR 308
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
+ +ALP AL+GMN+ LM+QY++FVADRLLV +F +
Sbjct: 309 YFTDALPVALLGMNADLMNQYVEFVADRLLVAFGNEKVFKV 349
>gi|402466347|gb|EJW01856.1| hypothetical protein EDEG_03668 [Edhazardia aedis USNM 41457]
Length = 324
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 212/261 (81%), Gaps = 2/261 (0%)
Query: 29 LMEQNQ-RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
L+EQ + RF +FPI+++++W MYKKAQ+ FW+AEEVDLS+D + W+ L E++FI H+L
Sbjct: 6 LLEQTEDRFVLFPIKHEEIWRMYKKAQSCFWSAEEVDLSKDKEQWQLLSSDEQYFIKHIL 65
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIV ENL RF ++Q+PEAR FYGFQIA+ENIHSEMYSLLL+T I+DS EK+
Sbjct: 66 AFFAASDGIVNENLLERFAAEVQVPEARCFYGFQIAIENIHSEMYSLLLDTLIRDSNEKN 125
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
LFNAI+ IPC+ +KA+WAL WI DS F++RL+ FACVEGIFFSG+F AIFWLKKRG+
Sbjct: 126 MLFNAIQTIPCIKRKAEWALKWISDKDSHFSKRLLAFACVEGIFFSGAFAAIFWLKKRGI 185
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
M GLTFSNELISRDEGLHC FACLLYSL ++ ++V +V +AVEIE +F+ +L
Sbjct: 186 MDGLTFSNELISRDEGLHCQFACLLYSLCANKVSDEEVEGIVKDAVEIEKEFLTVSLSVD 245
Query: 267 LIGMNSSLMSQYIKFVADRLL 287
LIGMN LMSQYI++VAD L+
Sbjct: 246 LIGMNCKLMSQYIEYVADVLM 266
>gi|381187133|ref|ZP_09894698.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacterium frigoris PS1]
gi|379650743|gb|EIA09313.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacterium frigoris PS1]
Length = 325
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/267 (61%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YK +ASFWTAEE+DLSQD+ W +L D E++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNKLNDDERYFVK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDDA 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LFNA+E P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDQLFNALEVFPAIKKKADWALQWI-ESDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIRGIIVDALNIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FVADRLLV +
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLVEL 270
>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/213 (77%), Positives = 188/213 (88%)
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HWE L EKHFISHVLAFF ASDGIVLEN+A RF+ ++Q+ EARAFYGFQIA+ENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFVASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVE 187
HSEMYSLLLETYIKDS EK+RLF+AIE +PCVA+KA+WAL WI +SFAERL+ FACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK+L ++V +
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGI 180
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIK 280
V EAVEIE +FV ++LPCAL+GMN LMSQYI+
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
Length = 321
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/272 (62%), Positives = 208/272 (76%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L+E N RF +FPI Y +W MYKKA ASFWT EEVDLS+D+ W++L D+E++FI +
Sbjct: 2 EPLLVESNNRFVIFPIIYNDIWIMYKKAIASFWTTEEVDLSKDLLDWKKLTDNERYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIA+ENIHSEMYSLL++TYI D E
Sbjct: 62 ILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K+ L AI+ I C+ +KAKWA WI +S + ERLV FA VEGIFFSG+F +IFWLKKR
Sbjct: 122 KNHLLKAIDTIDCIKEKAKWAEKWILDKESTYGERLVAFAAVEGIFFSGAFASIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L ++ +++ EAV IE F+ +ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKQLLYPPSTSRIINIIVEAVSIEKSFLTKALP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMN LM QYI+FVADRLL + +F
Sbjct: 242 VKLIGMNCELMCQYIEFVADRLLSELGCNKIF 273
>gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
donghaensis MED134]
Length = 328
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK++ASFWTAEE+DL QD+ W+ +L D E++FI
Sbjct: 5 EPILAENKDRFVIFPIQHDDIWEWYKKSEASFWTAEEIDLHQDLVDWKGKLTDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LFNA+EN P + +KA WAL WI S SFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDKLFNALENFPAIKKKADWALKWIDSP-SFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ A++IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERITEIIVNALDIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMNS+LM+QY+++V DRLL +
Sbjct: 244 PVSLIGMNSNLMTQYLEYVTDRLLTEL 270
>gi|399218011|emb|CCF74898.1| unnamed protein product [Babesia microti strain RI]
Length = 332
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 162/271 (59%), Positives = 205/271 (75%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
++ R ++P++ +W YKKAQASFWT EEVDL D + W L D E+HFI HVLA
Sbjct: 17 ILNPPDRASLYPLQRVDIWNFYKKAQASFWTVEEVDLGTDSRDWLGLTDGERHFIKHVLA 76
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFAASDGIVLENLAA+FLND+++ EA+ FY FQI +ENIHSEMYSLL++ YI++ EK
Sbjct: 77 FFAASDGIVLENLAAKFLNDVKLLEAQFFYVFQITVENIHSEMYSLLIDKYIQEESEKMH 136
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMP 208
LF A+E IP + +KA+WA WI++ +SFAERLV + VEGI FSGSFCAIFWLKKRGLMP
Sbjct: 137 LFRAVETIPAIRKKAEWAARWINNENSFAERLVAYTAVEGILFSGSFCAIFWLKKRGLMP 196
Query: 209 GLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALI 268
GLTFSNELISRDEGLH +F C +Y LR L VH ++ AV++E F+C++LPC LI
Sbjct: 197 GLTFSNELISRDEGLHAEFGCYMYRQLRHPLPESTVHDIIRNAVQVERAFICDSLPCDLI 256
Query: 269 GMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
GMNS LM+QYI++V+DRLL + +F +A
Sbjct: 257 GMNSRLMTQYIEYVSDRLLSSLGVSKIFNVA 287
>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
Length = 321
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI YK++W MYKKA ASFWT +EVDLS+D+ W++L + E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLSDWKKLNNEEQYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIAMENIHSEMYSLL++TYI +KE
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAIE + + +K++WA WI + SF ERL+ FA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEYLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L+ + + ++ EAV IE +F+ +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNEIITIIIKEAVSIEKEFLTNIIP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+F+ADRLL+ +
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLEL 267
>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
Length = 365
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 166/263 (63%), Positives = 208/263 (79%), Gaps = 1/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + + RF +FP+R+ ++W+ YKKA ASFWT EEVDL +D+ WE++ E++FIS
Sbjct: 46 EPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISR 105
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF N++++ EAR FYGFQIA+ENIHSEMYS L+ETYI+D KE
Sbjct: 106 VLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKE 165
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ +LFNAI + +KA WAL WI + SFAERL+ FA VEGIFFSGSF +IFWLKKR
Sbjct: 166 RMKLFNAIFEFEFIKKKADWALRWISDTKASFAERLIAFAAVEGIFFSGSFASIFWLKKR 225
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLT SNELISRDEGLH DFACLLYS+L+ +L +++ ++ +AV IE +F+ EALP
Sbjct: 226 GLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLSQERIFEIIRDAVAIEQEFLTEALP 285
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+IGMN LMSQYI+FVAD LL
Sbjct: 286 VDMIGMNCRLMSQYIEFVADHLL 308
>gi|347535523|ref|YP_004842948.1| ribonucleoside-diphosphate reductase subunit beta [Flavobacterium
branchiophilum FL-15]
gi|345528681|emb|CCB68711.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
branchiophilum FL-15]
Length = 325
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +W MYK +ASFWTAEE+DLSQD+ W +L + E++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWNMYKSMEASFWTAEEIDLSQDLTDWNFKLNNEERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEI 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LF+A++ P + +KA WAL WI +SDSFAERL+ FA VEGIFFSG+FCAI+WLKKR
Sbjct: 125 EKDELFHALDVFPAIKKKADWALKWI-TSDSFAERLIAFAAVEGIFFSGAFCAIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLT+SNELISRDEG+HCDFA L++ L ++ Q++ ++ A++IE +F+ E+L
Sbjct: 184 GLMPGLTYSNELISRDEGVHCDFAVHLHNNHLVNKVSKQRITEIITNALDIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN++LM+QY++FVADRLLV +
Sbjct: 244 PVSLIGMNAALMTQYLEFVADRLLVEL 270
>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
Length = 323
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 206/267 (77%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L+ RF +FPI++ +W MYK+A ASFWT EEVDLS D+ W+ L E+ FIS
Sbjct: 3 SEPLLVNNPDRFVIFPIQHGDIWRMYKQAVASFWTVEEVDLSYDLIDWKNLKPEERRFIS 62
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++LAFFA SDGIV ENL +F ++QIPEAR FYGFQIA+ENIHSEMYSLL++TYI D+
Sbjct: 63 YILAFFAVSDGIVNENLVEKFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIDDNN 122
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLF+++ + CV +K++WAL WI+ S + ERLV FA VEGIFFSGSF AIFWLKKR
Sbjct: 123 EKKRLFSSMRTMDCVRKKSEWALKWINDSAPYGERLVAFAAVEGIFFSGSFAAIFWLKKR 182
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFACLL++ L + +V+ ++ AV +ET+F+ EAL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACLLFTNYLSHKPSQDRVYEIIDSAVSVETEFLTEAL 242
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMNS M +YIKFV+DRLLV +
Sbjct: 243 SIDLIGMNSKSMIEYIKFVSDRLLVSL 269
>gi|373108817|ref|ZP_09523098.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 10230]
gi|423129513|ref|ZP_17117188.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 12901]
gi|423133178|ref|ZP_17120825.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CIP 101113]
gi|423328773|ref|ZP_17306580.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 3837]
gi|371646062|gb|EHO11579.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 10230]
gi|371648563|gb|EHO14051.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 12901]
gi|371649234|gb|EHO14715.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CIP 101113]
gi|404604335|gb|EKB03969.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 3837]
Length = 325
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 214/268 (79%), Gaps = 3/268 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
QEPIL E RF +FPI++ +W+ YKK +ASFWTAEE+DL QD+ W +L + E++FI
Sbjct: 4 QEPILTENKNRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNEDERYFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+K+
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKNE 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RLF AIE P + +KA+WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKK
Sbjct: 124 EEKDRLFRAIEVFPAIMKKAEWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+
Sbjct: 183 RGLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIREILVDALNIEREFITES 242
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP +LIGMNS+LM+QY++FV DRLLV +
Sbjct: 243 LPVSLIGMNSTLMTQYLEFVTDRLLVEL 270
>gi|377830065|ref|YP_005296225.1| unnamed protein product [Cotia virus SPAn232]
gi|377814308|gb|AFB76927.1| ribonucleotide reductase small subunit [Cotia virus SPAn232]
Length = 331
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/274 (61%), Positives = 208/274 (75%), Gaps = 1/274 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D E IL E + RF +FPI++ +W MYK+A ASFWT +EVDLS+D+ W++L + E+HFI
Sbjct: 10 DTEYILKESSDRFVIFPIQHNDIWTMYKRALASFWTVDEVDLSKDINDWKKLSNDERHFI 69
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+VLAFFAASDGIV ENLA RF ND+Q+ EAR FYGFQIA+ENIHSEMYSLL++TYI DS
Sbjct: 70 KYVLAFFAASDGIVNENLAKRFFNDVQLSEARCFYGFQIAIENIHSEMYSLLIDTYITDS 129
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+EK+ L AIE I CV KA W WI S +F RLV FA VEGIFFSGSF AIFW+K
Sbjct: 130 EEKNFLLKAIETIECVKLKADWTKKWISDYSSTFGTRLVAFAAVEGIFFSGSFAAIFWIK 189
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACLL+ L+ + + ++V +AV IE F+ +A
Sbjct: 190 KRGLMPGLTFSNELISRDEGLHCDFACLLFKYLKYPPTEEVIVNIVKDAVIIEKLFLQDA 249
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+P LIG+N LM +YI+FVADRLL + +++
Sbjct: 250 IPVKLIGINYELMCKYIEFVADRLLKELSCSTIY 283
>gi|409124160|ref|ZP_11223555.1| ribonucleoside-diphosphate reductase small chain [Gillisia sp.
CBA3202]
Length = 325
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/265 (61%), Positives = 213/265 (80%), Gaps = 3/265 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFIS 84
EPIL E RF +FPI++ +W+ YKK +ASFWTAEE+DL QD+ W L++ E++FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNADERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK++LF AIE+ P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKNQLFQAIEHFPAIKKKADWALQWI-ESDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L+ + + ++ +++H ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHQNHIINKVPKERIHQILTDALTIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLV 288
P +LIGMN+ LM++Y++FV DRLLV
Sbjct: 244 PASLIGMNAKLMTEYLEFVTDRLLV 268
>gi|410955834|ref|XP_003984555.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Felis
catus]
Length = 297
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 200/249 (80%), Gaps = 1/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWESLKAEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+QI EAR FYGFQIAMENIHSEMYSLL++TYIKD +E+ LFNAIE +PCV +KA WAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPREREFLFNAIETMPCVKKKADWALR 120
Query: 169 WIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI +S + ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKESTYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + Q+V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL+
Sbjct: 181 ACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 288 VHIHQCSLF 296
+ + +F
Sbjct: 241 LELGFGKVF 249
>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 166/274 (60%), Positives = 210/274 (76%), Gaps = 3/274 (1%)
Query: 26 EPILM--EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEKHF 82
EPI E+ RF +FPI Y +W MYK+ ASFWTA+E+DLS D+ W + L+ E+HF
Sbjct: 1 EPICRTDEEGSRFSLFPIAYPDLWSMYKQHVASFWTADEIDLSADLSDWHKKLNPDERHF 60
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
IS VLAFFA +DGIV+ENLA RF ++ +PEAR FYGFQ+AME+IH E Y LL++TYI D
Sbjct: 61 ISMVLAFFAGADGIVVENLAERFCREVTVPEARCFYGFQMAMESIHQETYCLLIDTYITD 120
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
K + RLF+A +P V +KA WA +I S SFAERLV FA VEGIFFSGSFCAIFWLK
Sbjct: 121 PKVRERLFSAHATVPSVERKASWAQRYIGSKASFAERLVAFAAVEGIFFSGSFCAIFWLK 180
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHC FAC LYS L+ +L +++ +++EAV++E F+C+A
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCSFACQLYSKLKLKLSQEEIQTIINEAVDVEKSFICDA 240
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP +LIGMNS LM+QYI+FVADR+L + +++
Sbjct: 241 LPVSLIGMNSRLMAQYIEFVADRMLTDLGYQAMY 274
>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
Length = 321
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI YK++W MYKKA ASFWT +EVDLS+D+ W++L + E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIAMENIHSEMYSLL++TYI +KE
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAIE + + +K++WA WI + SF ERL+ FA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L+ + +++EAV IE +F+ +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIITIIINEAVSIEKEFLTNIIP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+F+ADRLL+ +
Sbjct: 242 VKLIGMNCVLMSQYIEFIADRLLLEL 267
>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 168/249 (67%), Positives = 200/249 (80%), Gaps = 1/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+QI EAR FYGFQIAMENIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALR 120
Query: 169 WIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI + ++ ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + ++V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL+
Sbjct: 181 ACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 288 VHIHQCSLF 296
+ + +F
Sbjct: 241 LELGFSKVF 249
>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase subunit beta [Flavobacterium
psychrophilum JIP02/86]
gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 325
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YK +ASFWTAEE+DLSQD+ W +L + E++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNKLSNDERYFVK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LFNA+E P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDELFNALEVFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIRSIIVDALNIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FVADRLLV +
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLVEL 270
>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 409
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 171/294 (58%), Positives = 216/294 (73%), Gaps = 4/294 (1%)
Query: 7 ETENEVNQREQGEQEQED-QEPILM--EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
ET + + E+E+ EP+ + RF +FPI + +W MYK+ ASFWT +E+
Sbjct: 62 ETRGGSTRSKTAEEEEATFIEPVCQHDDSGSRFSLFPIEHDDLWGMYKQHVASFWTVDEI 121
Query: 64 DLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
DLS D+ W ERL D+E+HFIS VLAFFA +DGIV+ENLA RF ++ +PEARAFYGFQ+
Sbjct: 122 DLSADLTDWHERLNDNERHFISMVLAFFAGADGIVVENLAERFCREVTVPEARAFYGFQM 181
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182
AME IH E Y LL+++YI D K++ LF A +P V +KA+WA +I S SFAERLV
Sbjct: 182 AMEGIHQETYCLLIDSYISDPKDREMLFAAHTKVPSVEKKARWAQRYIGSDASFAERLVA 241
Query: 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQ 242
FA VEGIFFSG+FC+IFWLKKRGLMPGLTFSNELISRDEGLHC FAC LYS L ++L
Sbjct: 242 FAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERKLSET 301
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+H ++ EAVE+E FVC+ALP LIGMN+SLMSQY++FVADRLL + +L+
Sbjct: 302 DMHKLIGEAVEVEKGFVCDALPVGLIGMNASLMSQYVEFVADRLLHDLGYRTLY 355
>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 169/271 (62%), Positives = 208/271 (76%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS- 78
+E E EP+L E R M PIRY ++E YKKA+ASFWTAEE+DLS+D+ W L+S
Sbjct: 63 KEMEKNEPLLNEDKNRLIMHPIRYPDIYEAYKKAEASFWTAEEIDLSKDLSDWNDKLNSN 122
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++++PEAR FYGFQI +ENIHSE YSLL++T
Sbjct: 123 ERFFISRVLAFFAASDGIVNENLTENFSVEVKVPEARCFYGFQIMIENIHSETYSLLIDT 182
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI+ IP + +KA+WAL WI++ ++ F ERLV FA +EG+FFSGSF +
Sbjct: 183 YIKDPKESDFLFNAIDYIPQIKEKAEWALRWINNDEALFGERLVAFASIEGVFFSGSFAS 242
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFA LL+S L + V +V EAVEIE +
Sbjct: 243 IFWLKKRGLMPGLTFSNELICRDEGLHTDFASLLFSHLDNKPDPAIVEKIVTEAVEIEKR 302
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 303 YFIDALPVALLGMNAKLMNQYVEFVADRLLV 333
>gi|260061082|ref|YP_003194162.1| ribonucleoside-diphosphate reductase small chain [Robiginitalea
biformata HTCC2501]
gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
[Robiginitalea biformata HTCC2501]
Length = 328
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 211/268 (78%), Gaps = 3/268 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+EPIL E RF +FPI++ +WE YKK +A FWTAEE+DL QD+ W +L D EK+FI
Sbjct: 5 EEPILKENKDRFVIFPIQHHDLWEWYKKCEACFWTAEEIDLHQDLSDWNNKLSDDEKYFI 64
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDE 124
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KEK+ LF AIEN P + +KA WAL WI S SFAERL+ FA VEGIFFSG+FC+IFWLKK
Sbjct: 125 KEKNVLFQAIENFPAIKKKADWALKWIESP-SFAERLIAFAAVEGIFFSGAFCSIFWLKK 183
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEG+HCD+A L++ L ++ +++ ++ A++IE +F+ E+
Sbjct: 184 RGLMPGLTFSNELISRDEGMHCDYAVHLHNNHLVNKVPKERITQIITNALDIEREFITES 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP +LIGMN+ LM+QY++FV DRLLV +
Sbjct: 244 LPVSLIGMNAKLMTQYLEFVTDRLLVEL 271
>gi|410083375|ref|XP_003959265.1| hypothetical protein KAFR_0J00620 [Kazachstania africana CBS 2517]
gi|372465856|emb|CCF60130.1| hypothetical protein KAFR_0J00620 [Kazachstania africana CBS 2517]
Length = 391
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 165/271 (60%), Positives = 212/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L+ R +FPI++ ++W+ YK+A+ASFWTAEE+DL +D+ W R+ +
Sbjct: 62 KETEQEEPLLVADPNRKTVFPIKFHEIWQAYKRAEASFWTAEEIDLGKDLHDWNNRMNPN 121
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FIS VLAFFAASDG+V ENL F ++ IPEA+AFYGFQI +ENIHSE YSLL++T
Sbjct: 122 EKFFISRVLAFFAASDGLVNENLVENFSAEVAIPEAKAFYGFQIMIENIHSETYSLLIDT 181
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI+ IP + +KA WAL WI+ ++S FAERLV FA +EG+FFSGSF +
Sbjct: 182 YIKDPKESEFLFNAIDTIPQIKEKALWALRWINDAESPFAERLVAFAAIEGVFFSGSFAS 241
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + + V +V EAV IE Q
Sbjct: 242 IFWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKPAPEVVERIVTEAVAIEKQ 301
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP +L+GMN+ LM+QY++FVADRLLV
Sbjct: 302 YFIDALPVSLLGMNADLMNQYVEFVADRLLV 332
>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
Length = 321
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI YK++W MYKKA ASFWT +EVDLS+D+ W++L + E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIA+ENIHSEMYSLL++TYI +KE
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAIENIHSEMYSLLIDTYISSTKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAIE + + +K++WA WI + SF ERL+ FA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L+ + +++EAV IE +F+ +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIIKIIINEAVSIEKEFLTNIIP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+F+ADRLL+ +
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLEL 267
>gi|385302064|gb|EIF46214.1| ribonucleoside-diphosphate reductase small chain [Dekkera
bruxellensis AWRI1499]
Length = 409
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/270 (61%), Positives = 206/270 (76%), Gaps = 2/270 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKH 81
E EP+L E RF MFPI+Y +W+MYKKA+ASFWTAEE+DLS+D+ W +++ E++
Sbjct: 83 ESSEPLLKENIHRFVMFPIQYDDIWQMYKKAEASFWTAEEIDLSKDLTDWNNKMNANERY 142
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENLA F+ +Q+PEARAFYGFQI +ENIHSE YSLLLETYI
Sbjct: 143 FISRVLAFFAASDGIVDENLAQNFMKQVQLPEARAFYGFQIMVENIHSETYSLLLETYIT 202
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAI IP + +KA WAL WI++ D+ +AERLV FA +EG+FFSGSF +IFW
Sbjct: 203 DKKESDYLFNAIHTIPPIKEKALWALRWINNDDALYAERLVAFAAIEGVFFSGSFASIFW 262
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFACLL+S L+ + ++ EAV IE F
Sbjct: 263 LKKRGLMPGLTFSNELICRDEGLHTDFACLLFSHLKHPPSKVIIKXIMTEAVNIEKTFWS 322
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALP +L+GMN +M+ Y+ F ADRLL+ +
Sbjct: 323 DALPVSLLGMNFDMMAXYVXFCADRLLIAL 352
>gi|408491217|ref|YP_006867586.1| ribonucleotide reductase of class Ia (aerobic), beta subunit NrdF
[Psychroflexus torquis ATCC 700755]
gi|408468492|gb|AFU68836.1| ribonucleotide reductase of class Ia (aerobic), beta subunit NrdF
[Psychroflexus torquis ATCC 700755]
Length = 326
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/287 (59%), Positives = 215/287 (74%), Gaps = 11/287 (3%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI + +WE YKK +ASFWTAEE+DL QD+ W+ +L E++FI
Sbjct: 5 EPILEENKNRFVLFPITHPDIWEWYKKCEASFWTAEEIDLQQDITDWKTKLSKDEQYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI +ENIHSE YSLL++TY+ D K
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMVENIHSETYSLLIDTYVDDDK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LF AIEN P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDLLFKAIENFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +FV E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNEHLVNQVPKERIRAIIVDALTIEREFVTESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLF 310
P +LIGMNS+LM+QY++FVADRL LF + C K A F
Sbjct: 244 PVSLIGMNSNLMTQYLEFVADRL--------LFELGCDKEYGTANPF 282
>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
NW-LW]
Length = 321
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 209/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI YK++W MYKKA ASFWT +EVDLS+D+ W++L + E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLSNEEQYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIAMENIHSEMYSLL++TYI +KE
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAIE + + +K++WA WI + SF ERL+ FA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L+ + + +++EAV IE +F+ +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNEIITIIINEAVSIEKEFLTNIIP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+F+ADRLL+ +
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLEL 267
>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
gattii WM276]
Length = 430
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 217/296 (73%), Gaps = 8/296 (2%)
Query: 3 SLKNETENEVNQREQGEQEQEDQE-------PILMEQNQRFCMFPIRYKQVWEMYKKAQA 55
SL NE + R+ +++ + IL E + RF +FPI+Y ++W+ YK+AQA
Sbjct: 70 SLSNERSDSNKGRKPAGKDKMPMKFLEEEEEDILRESDSRFVLFPIKYNEIWQAYKRAQA 129
Query: 56 SFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEA 114
SFWTAEE+D D+ W +R+ + E+ FI +LAFFAASDGIV EN+ ++F ++QI EA
Sbjct: 130 SFWTAEELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGENIVSQFSLEVQIAEA 189
Query: 115 RAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD 174
RAFY FQ +E +HSE YSLL+ETY++D++EK LF +ENIPC+ QKA WAL +I
Sbjct: 190 RAFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMENIPCIKQKADWALKYITDEL 249
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
F RLV FACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEG+H DFACLLY+
Sbjct: 250 PFRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNH 309
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
L+ R +VH +V EA+ IE QF+ +ALPCALIG+N+ LM QY++FVADRL+V +
Sbjct: 310 LKHRCSTDEVHRIVSEALVIEKQFLTDALPCALIGINAHLMCQYMEFVADRLVVDL 365
>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
Length = 352
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 217/298 (72%), Gaps = 2/298 (0%)
Query: 4 LKNETENEVNQREQGEQEQEDQ--EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
L ET++E N + + + +Q EP+L + K +W MYKKA+ASFW E
Sbjct: 10 LTKETKDEENIEKLVNEVKINQVNEPMLKYSRENRNELKELIKDIWSMYKKAEASFWVTE 69
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
E+DLSQD + WE L D E+HFI +VLAFFAASDGIV+ENLA FL +IQIPEAR +Y FQ
Sbjct: 70 EIDLSQDTRDWESLKDPERHFIKYVLAFFAASDGIVMENLAVNFLREIQIPEARMYYAFQ 129
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLV 181
+++E IHSE YSLL++ YI + KE+ LF AI +I V +KA+WA W++S SFAER++
Sbjct: 130 MSIEQIHSETYSLLIDRYITEIKERQMLFEAISHIEAVKKKAEWATKWMNSERSFAERII 189
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
GF VEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH DFACL+Y L+ +L
Sbjct: 190 GFCAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHADFACLIYKALKFKLPA 249
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+V ++ EAVE+E F+C++LP LIGMNS LM+QYI+FVADRLL + ++ ++
Sbjct: 250 PRVQQIISEAVEVERNFLCDSLPVDLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVS 307
>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
Length = 246
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/246 (66%), Positives = 198/246 (80%), Gaps = 1/246 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FISH
Sbjct: 1 EPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFISH 60
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD KE
Sbjct: 61 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 120
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 121 RDFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFWLKKR 180
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AV IE +F+ +ALP
Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEETVKKIIVNAVAIEQEFLTDALP 240
Query: 265 CALIGM 270
LIGM
Sbjct: 241 VKLIGM 246
>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
Length = 326
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/264 (61%), Positives = 209/264 (79%), Gaps = 3/264 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK++ASFWTAEE+DL QD+ W +L D E++FI
Sbjct: 6 EPILQENKDRFVIFPIKHADIWEWYKKSEASFWTAEEIDLHQDLTDWTTKLNDDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF AIEN P + +KA WAL WI S SFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 126 EKDKLFKAIENFPAIKKKADWALQWIESP-SFAERLIAFAAVEGIFFSGAFCSIYWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
G+MPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 185 GIMPGLTFSNELISRDEGVHCDFAVHLHNNHLVNKVPKERIRAIIVDALNIEREFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P +LIGMN+ LM+QY++FV DRLL
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLL 268
>gi|383451662|ref|YP_005358383.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
indicum GPTSA100-9]
gi|380503284|emb|CCG54326.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
indicum GPTSA100-9]
Length = 325
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +W++YKK +A FWTAEE+DL QD+ W +L D E++FI
Sbjct: 5 EPILAENKDRFVIFPIQHHDIWDLYKKQEACFWTAEEIDLHQDITDWSTKLNDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F++++Q EA+ FYGFQ+ MENIHSE YSLL++TY+KD K
Sbjct: 65 HILAFFAASDGIVNENLAENFVSEVQYSEAKFFYGFQLMMENIHSETYSLLIDTYVKDEK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+ LF AIEN P +A+KA WAL WI S SFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKNILFKAIENFPAIAKKADWALKWIDSP-SFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ ++ ++ A++IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNNHLVNKVSKDRITEIITNALDIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FV DRLLV +
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVEL 270
>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
Length = 377
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/283 (59%), Positives = 214/283 (75%), Gaps = 2/283 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
+ E N+ +G + EP+L + + RF +FP+R+ ++W+ YKKA ASFWT EEVDL +D
Sbjct: 42 DTEKNEETEG-NALDANEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKD 100
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+ WE++ E++FIS VLAFFAASDGIV ENL RF N++++ EAR FYGFQIA+ENIH
Sbjct: 101 MNDWEKMNGDEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIH 160
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVE 187
SEMYS L+ETYI+D KE+ LFNAI + +KA WA+ WI SFAERL+ FA VE
Sbjct: 161 SEMYSKLIETYIRDEKERLTLFNAIFEFEFIKKKADWAMKWISDKKASFAERLIAFAAVE 220
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS+L+ +L +++ +
Sbjct: 221 GIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIFEI 280
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ +AV IE +F+ EALP +IGMN LMSQYI+FVAD LL +
Sbjct: 281 IRDAVCIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLAEL 323
>gi|374288410|ref|YP_005035495.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
Length = 322
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 206/264 (78%), Gaps = 2/264 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
+PIL + RF +FP++Y ++EMYK A FWTA+E+D + D+ WE+L E+HFI H
Sbjct: 2 DPILAPNDDRFVLFPLKYHSIFEMYKNHMAVFWTADELDFASDITDWEKLNKDEQHFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF ND+QIPEAR FYGFQIAMENIHSE YSLL++TY+KD KE
Sbjct: 62 ILAFFAASDGIVNENLALRFYNDVQIPEARCFYGFQIAMENIHSETYSLLIDTYVKDPKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LF+A+ + P V +KA WA+ W+ S SFAERL+ FA +EGIFFSGSFC+I+WLKKRG
Sbjct: 122 KDELFHAVTHFPFVEKKADWAMKWMQSKRSFAERLIAFAAIEGIFFSGSFCSIYWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLL--RKRLHWQKVHHMVHEAVEIETQFVCEAL 263
LMPGL SNE ISRDEGLHC+FAC ++ LL ++L+ + + ++ EAV IE +F+ EA+
Sbjct: 182 LMPGLCTSNEFISRDEGLHCEFACHIHELLTPEEQLNKETITQIITEAVSIEKEFITEAI 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P +LIGMN+ +MS+YI+FVAD L
Sbjct: 242 PVSLIGMNADMMSRYIEFVADYWL 265
>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
Length = 328
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 208/267 (77%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +A WTAEE+DL QD+ W +L D EK+FI
Sbjct: 6 EPILQENKDRFVIFPIQHHDLWEWYKKQEACIWTAEEIDLHQDLTDWNTKLNDDEKYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDDK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LF AIEN P + +KA WAL WI S SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKDILFKAIENFPAIKKKADWALKWIESP-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCD+A L+ + + ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHKNHIVNKVTKERITDIIVDALNIEREFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMNS LM+QY++FV DRLLV +
Sbjct: 245 PVSLIGMNSKLMTQYLEFVTDRLLVEL 271
>gi|336171888|ref|YP_004579026.1| ribonucleoside-diphosphate reductase [Lacinutrix sp. 5H-3-7-4]
gi|334726460|gb|AEH00598.1| Ribonucleoside-diphosphate reductase [Lacinutrix sp. 5H-3-7-4]
Length = 327
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/264 (63%), Positives = 207/264 (78%), Gaps = 3/264 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK++AS WTAEE+DL QD+ W +L D E++FI
Sbjct: 6 EPILQENKDRFVIFPIQHHDLWEWYKKSEASMWTAEEIDLHQDLTDWSSKLTDDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 66 HVLAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LFNAIE P + +KA+WAL WI S SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKAMLFNAIETFPAIKKKAEWALKWIESP-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L+ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDFAVHLHEHHLINKVPKERIREILVDALNIEREFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P +LIGMNS LMSQY++FV D LL
Sbjct: 245 PVSLIGMNSKLMSQYLEFVTDGLL 268
>gi|432951682|ref|XP_004084883.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Oryzias latipes]
Length = 265
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/255 (64%), Positives = 201/255 (78%), Gaps = 1/255 (0%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
E + + ++EP+L E +RF +FP++Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L
Sbjct: 9 ENTKSLKTEEEPLLKENPRRFVIFPVQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETL 68
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
D E+ FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL
Sbjct: 69 KDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLL 128
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGS 194
++TYIKD KE+ LFNAIE +PCV +KA WAL+WI + ++ ER+V FA VEGIFFSGS
Sbjct: 129 IDTYIKDPKEREYLFNAIETLPCVKRKADWALNWIGNKHAAYGERVVAFAAVEGIFFSGS 188
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEI
Sbjct: 189 FAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSSETVTEIIRNAVEI 248
Query: 255 ETQFVCEALPCALIG 269
E +F+ EAL +I
Sbjct: 249 EQEFLTEALNSEIIA 263
>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
Length = 326
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 208/267 (77%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +A WTAEE+DLS+D W +L D E++FI
Sbjct: 5 EPILQENKDRFVIFPIQHNDLWEWYKKQEACIWTAEEIDLSEDANDWNNKLNDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LF AIEN P + +KA WAL WI S SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKTVLFQAIENFPAIKKKADWALKWIDSP-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ + ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNKHIINQVPKERITEILVDALNIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMNS LM+QY++FV DRLLV +
Sbjct: 244 PASLIGMNSKLMTQYLEFVTDRLLVEL 270
>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
Length = 321
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 207/266 (77%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI YK++W MYKKA ASFWT +EVDLS+D+ W++L + E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++Q EAR FYGFQIAMENIHSEMYSLL++TYI +KE
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAIE + + +K++WA WI + SF ERL+ FA VEGIFF GSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFCGSFAAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACL++ L+ + +++EAV IE +F+ +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIITIIINEAVSIEKEFLTNIIP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+F+ADRLL+ +
Sbjct: 242 VKLIGMNCVLMSQYIEFIADRLLLEL 267
>gi|422294918|gb|EKU22218.1| ribonucleoside-diphosphate reductase subunit M2 [Nannochloropsis
gaditana CCMP526]
Length = 297
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 165/243 (67%), Positives = 200/243 (82%), Gaps = 1/243 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYK+A+ASFWTAEE+DL+ D WE+L D+E+HF+SHVLAFFAASDGIV ENLA F N+
Sbjct: 1 MYKQAEASFWTAEELDLAHDKTDWEKLTDNERHFVSHVLAFFAASDGIVNENLALNFSNE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
IQ+PEAR FYGFQIA+ENIHSE+YSLL++TYIK+ EKH+L NAIE +PCV +KA+WAL
Sbjct: 61 IQLPEARCFYGFQIAIENIHSEVYSLLIDTYIKNPSEKHKLLNAIETVPCVRRKARWALR 120
Query: 169 WIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
W SFAERL+ FA VEGIFFSGSFC+IFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDRKYASFAERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLAFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACLLY+ + + ++V ++ +AV IE QF+ +ALP LIGMNS LM +YI+F ADRLL
Sbjct: 181 ACLLYTKCKIKCPEERVKAIIQDAVAIEKQFITDALPVELIGMNSRLMCEYIEFCADRLL 240
Query: 288 VHI 290
+ +
Sbjct: 241 LAL 243
>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. neoformans JEC21]
gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 430
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/270 (60%), Positives = 206/270 (76%), Gaps = 1/270 (0%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
IL E RF +FPI+Y ++W+ YK AQASFWTAEE+D D+ W +R+ + E+ FI +
Sbjct: 102 ILRESESRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRI 161
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIV EN+ ++F ++QI EARAFY FQ +E +HSE YSLL+ETY++D++EK
Sbjct: 162 LAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEK 221
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
LF + NIPC+ QKA WAL +I F RLV FACVEGIFFSGSF AIFWLKKRGL
Sbjct: 222 DFLFRGMTNIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGL 281
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
MPGLTFSNELISRDEG+H DFACLLY+ L+ R +VHH+V EA+ IE QF+ +ALPCA
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHHIVSEALVIEKQFLTDALPCA 341
Query: 267 LIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIG+N+ LM QY++FVADRL+V + ++
Sbjct: 342 LIGINAHLMCQYMEFVADRLVVDLGYPKIY 371
>gi|399925484|ref|ZP_10782842.1| ribonucleoside-diphosphate reductase small chain [Myroides
injenensis M09-0166]
Length = 325
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 162/268 (60%), Positives = 212/268 (79%), Gaps = 3/268 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
QEPIL E RF +FPI++ +W+ YKK +ASFWTAEE+DL QD+ W +L + E++FI
Sbjct: 4 QEPILTENKNRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNEDERYFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA F+N++Q PEA+ FYGFQI MENIHSE YSLL++TY+K+
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKNE 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK +LF AI+ P + +KA WAL WI S+SFAERL+ FA VEGIFFSG+FC+IFWLKK
Sbjct: 124 EEKDKLFRAIDVFPAIKKKADWALKWI-ESESFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ A+ IE +F+ E+
Sbjct: 183 RGLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIREILVNALNIEREFITES 242
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP +LIGMN+ LM+QY++FV DRLLV +
Sbjct: 243 LPVSLIGMNAGLMTQYLEFVTDRLLVEL 270
>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
Length = 325
Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 166/267 (62%), Positives = 203/267 (76%), Gaps = 5/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L +R+ +FPI+Y +W+MYKKA++SFWT EEVDL+ D W L D E++FIS+
Sbjct: 8 EPLLNPNEERYVLFPIKYHDIWQMYKKAESSFWTVEEVDLTADRNDWLSLNDKERYFISN 67
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV NL RF N++ I EA+ FYGFQ+A+ENIHSEMYSLL++ YI D E
Sbjct: 68 ILAFFAASDGIVNANLVERFANEVTILEAKCFYGFQVAIENIHSEMYSLLIDAYITDQDE 127
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAI IPC+ +KA WAL WI SFA R++ FACVEGIFFSG+F +IFWLK R
Sbjct: 128 KTHLFNAISTIPCIKKKADWALKWIKDEKSSFATRVIAFACVEGIFFSGAFASIFWLKNR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHCDFACLL L+ K H + +V EAVEIE +F+ +L
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLNQYLINKSPH---ILDIVKEAVEIEKEFLGVSL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN LM QYI+FVADRLL+++
Sbjct: 245 PVNLIGMNCKLMCQYIEFVADRLLINL 271
>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
Length = 325
Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 207/264 (78%), Gaps = 3/264 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +ASFWTAEE+DL QD+ W +L + EK+FI
Sbjct: 5 EPILQENENRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTKLTEDEKYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDDV 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLF AIE P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDRLFKAIEVFPAIKKKADWALRWI-DSDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ ++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPPARIKEILLDALTIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P +LIGMN+ LM+QY++FV DRLL
Sbjct: 244 PISLIGMNAKLMTQYLEFVTDRLL 267
>gi|378706263|gb|AFC35064.1| hypothetical protein OtV6_156c [Ostreococcus tauri virus RT-2011]
Length = 388
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 160/275 (58%), Positives = 208/275 (75%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+++ EPIL RF +FP++Y ++WE+YKKAQ S WTAEEVDLS+D+ W+ L D+E+
Sbjct: 70 EDEYEPILAPTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNDNEQK 129
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIK
Sbjct: 130 FIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIK 189
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
DS EK +LF AI+ +PC+ +KA+WA+ W S FAERL FACVEGIFFSGSFCAI+WL
Sbjct: 190 DSTEKKQLFEAIQTVPCIEKKAQWAMKWFDKSRPFAERLFAFACVEGIFFSGSFCAIYWL 249
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGL FSNELISRDEGLH +FA L+ L+R + + +H +V EAVEIE F+ +
Sbjct: 250 KKRGLMPGLCFSNELISRDEGLHQEFAVELFKLMRNKPKTETIHSIVKEAVEIEKGFILD 309
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
ALPCALIGMNS MS+YI++V+DRLL I Q ++
Sbjct: 310 ALPCALIGMNSEKMSEYIEYVSDRLLKQIGQPPIW 344
>gi|402878877|ref|XP_003903090.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Papio anubis]
Length = 297
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 165/249 (66%), Positives = 198/249 (79%), Gaps = 1/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF +
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 169 WIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI S F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + ++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL
Sbjct: 181 ACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 288 VHIHQCSLF 296
V + +F
Sbjct: 241 VELGFSKIF 249
>gi|340617898|ref|YP_004736351.1| ribonucleoside-diphosphate reductase, small subunit [Zobellia
galactanivorans]
gi|339732695|emb|CAZ95963.1| Ribonucleoside-diphosphate reductase, small subunit [Zobellia
galactanivorans]
Length = 328
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E N RF +FPI++ +WE YKK +A FWTAEE+DL +D W+ +L + E++FI
Sbjct: 6 EPILEENNDRFVIFPIKHHDLWEWYKKCEACFWTAEEIDLHEDQNDWDNKLSEDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F++++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LF AIEN P + +KA WAL+WI S SFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKALLFRAIENFPAIKKKADWALNWIESP-SFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCD+A L++ L ++ +++ ++ +A++IE +F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNKHLVNKVPKERITQILTDALDIEREFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMNS LM+QY++FV DRLLV +
Sbjct: 245 PASLIGMNSKLMTQYLEFVTDRLLVEL 271
>gi|386783699|gb|AFJ24744.1| ribonucleoside diphosphate reductase subunit M2-2 [Schmidtea
mediterranea]
Length = 321
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/266 (60%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L E R I+Y+ +WEM+ KA++SFWT EV+LS+D HW+++ D E++FI+H
Sbjct: 2 EILLTEDKSRIGFLNIQYEDIWEMFNKARSSFWTVNEVNLSKDFAHWKKMNDDERYFITH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF+ +++IPEA AFY FQIA+ENIHSEMYSLL+++Y+ D++
Sbjct: 62 VLAFFAASDGIVNENLVERFIQEVKIPEAEAFYSFQIAIENIHSEMYSLLIDSYVTDTET 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K++LFNAIE +PCV +KA+WAL WI S F R+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 122 KNKLFNAIETMPCVQKKAQWALRWISDKKSTFGTRVVAFAAVEGIFFSGSFASIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL FSNELISRDEGLHCDFACL++ L + ++V ++ EAV IE +F+ +ALP
Sbjct: 182 GLMPGLCFSNELISRDEGLHCDFACLMFKYLSSKPSPEQVLDLIKEAVGIEKEFLTDALP 241
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+LIGMN+ M +YI+FVADRLLV +
Sbjct: 242 VSLIGMNAESMCEYIEFVADRLLVEL 267
>gi|444727943|gb|ELW68416.1| Ribonucleoside-diphosphate reductase subunit M2 B [Tupaia
chinensis]
Length = 365
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 170/285 (59%), Positives = 209/285 (73%), Gaps = 24/285 (8%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL 65
+ +ENEV E EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDL
Sbjct: 13 DTSENEVTSNE---------EPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDL 63
Query: 66 SQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME 125
S+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI +E
Sbjct: 64 SKDLPHWNKLKPDEKYFISHILAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQILIE 123
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFAC 185
N+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI A+R F
Sbjct: 124 NVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI------ADRKSTF-- 175
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
GSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 176 -------GSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVR 228
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV +
Sbjct: 229 EIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVEL 273
>gi|444322760|ref|XP_004182021.1| hypothetical protein TBLA_0H02160 [Tetrapisispora blattae CBS 6284]
gi|387515067|emb|CCH62502.1| hypothetical protein TBLA_0H02160 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/271 (60%), Positives = 210/271 (77%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
++ E E +L + +R ++PI Y ++E YK+A+ASFWTAEE+DLS+D+ W R+ +
Sbjct: 73 KDLEKNEVLLNKDKKRKIIYPILYPDIYEAYKRAEASFWTAEEIDLSKDLHDWNNRMTPN 132
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++Q+PEA+ FYGFQI +ENIHSE YSLL++T
Sbjct: 133 ERFFISRVLAFFAASDGIVNENLVENFSVEVQVPEAKMFYGFQIMIENIHSETYSLLIDT 192
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCA 197
YIKD +E LFNAIE IP + +KA WAL WI++ D +FAERLV FA +EGIFFSGSF A
Sbjct: 193 YIKDPRESTFLFNAIETIPQIKEKAIWALRWINAEDATFAERLVAFASIEGIFFSGSFAA 252
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKK+GLMPGLTFSNELI RDEGLH DFACLL+S L ++ + V +V EAVEIE
Sbjct: 253 IFWLKKKGLMPGLTFSNELICRDEGLHTDFACLLFSHLENKIKPEIVEKIVTEAVEIEKG 312
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLL+
Sbjct: 313 YFRDALPVALLGMNADLMNQYVEFVADRLLI 343
>gi|356980108|gb|AET43587.1| ribonucleotide reductase [Micromonas pusilla virus PL1]
Length = 389
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/285 (58%), Positives = 211/285 (74%), Gaps = 1/285 (0%)
Query: 13 NQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
N E E +++ EPIL RF +FP++Y ++WE+YKKAQ S WTAEEVDLS D++ W
Sbjct: 61 NYFEYQEYIEDEYEPILASTLDRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSSDMEDW 120
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
+ L D+EK FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E Y
Sbjct: 121 KNLNDNEKKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETY 180
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFF 191
S L++ YIKDS EK LF AI+ +PC+ +KA WAL W + S +FAERL FACVEGIFF
Sbjct: 181 SKLIDKYIKDSTEKKHLFEAIQTVPCIQKKANWALKWFDTKSRTFAERLFAFACVEGIFF 240
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
SGSFCAI+WLKKRGLMPGL FSNELISRDEGLH +FA L+ LLR + + +H +V EA
Sbjct: 241 SGSFCAIYWLKKRGLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTEVIHSIVREA 300
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
VEIE F+ +ALPC LIGMNS MS+YI++V+DRLL I Q +L+
Sbjct: 301 VEIEKGFILDALPCNLIGMNSEKMSEYIEYVSDRLLKQIGQPTLW 345
>gi|405119255|gb|AFR94028.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. grubii H99]
Length = 430
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/270 (60%), Positives = 206/270 (76%), Gaps = 1/270 (0%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
IL E + RF +FPI+Y ++W+ YK AQASFWTAEE+D D+ W +R+ + E+ FI +
Sbjct: 102 ILRESDSRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRI 161
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIV EN+ ++F ++QI EARAFY FQ +E +HSE YSLL+ETY++D++EK
Sbjct: 162 LAFFAASDGIVGENIVSQFSLEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEK 221
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
LF + NIPC+ QKA WAL +I F RLV FACVEGIFFSGSF AIFWLKKRGL
Sbjct: 222 DFLFRGMANIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGL 281
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
MPGLTFSNELISRDEG+H DFACLLY+ L+ R +VH +V EA+ IE QF+ +ALPCA
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHRIVSEALAIEKQFLTDALPCA 341
Query: 267 LIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIG+N+ LM QY++FVADRL+V + ++
Sbjct: 342 LIGINAHLMCQYMEFVADRLVVDLGYPKIY 371
>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 269
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWT EEVDLS+D+ W++L D EKHFI H+LAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTVEEVDLSKDLSDWDKLKDDEKHFIKHILAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+QI EAR FYGFQIAMEN+HSEMYSLL++TYI+DS E+ LFNAIE +PC+ +KA WAL
Sbjct: 61 VQITEARCFYGFQIAMENVHSEMYSLLIDTYIRDSDERDYLFNAIETLPCIKKKADWALK 120
Query: 169 WIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI S S +FAER+V FA VEGIFFSGSF +IFWLKKRGL+PGLTFSNELISRDEGLH DF
Sbjct: 121 WISSNSANFAERIVAFAAVEGIFFSGSFASIFWLKKRGLLPGLTFSNELISRDEGLHTDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL+Y+ + ++ +V ++ EAV IE F+ +ALP L+GMN LMSQYI+FVADRLL
Sbjct: 181 ACLMYNYVVQKPPNSRVIEILKEAVVIEKDFLTDALPVRLLGMNCDLMSQYIEFVADRLL 240
Query: 288 VHI 290
+
Sbjct: 241 YEL 243
>gi|372209392|ref|ZP_09497194.1| ribonucleoside-diphosphate reductase small chain [Flavobacteriaceae
bacterium S85]
Length = 323
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/265 (61%), Positives = 211/265 (79%), Gaps = 3/265 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI+++ +WE YKK +AS WTAEE+DL QD+ WE +L D E++FI
Sbjct: 5 EPILQEDPNRFVIFPIKHQDIWEWYKKQEASIWTAEEIDLHQDISDWENKLNDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+ ++Q EA+ FYGFQI MENIHSE+YSLL++TY+K+ +
Sbjct: 65 HILAFFAASDGIVNENLAENFVTEVQYAEAKFFYGFQIMMENIHSEVYSLLIDTYVKNEE 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK++LF AIE+ P + KA WAL WI S+SFAERL+ FA VEGIFFSGSFCAIFW+KKR
Sbjct: 125 EKNKLFKAIEHFPAIKLKADWALKWIE-SESFAERLIAFAAVEGIFFSGSFCAIFWMKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GL+PGLTFSNELISRDEGLHCDFA L++ + ++ +++ ++ A++IE F+ E+L
Sbjct: 184 GLLPGLTFSNELISRDEGLHCDFAVHLHNNHIINKVPKERITEIITNALDIEKVFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLV 288
P +LIGMN+ LM+QY++FV DRLLV
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLV 268
>gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Nomascus leucogenys]
gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan
troglodytes]
gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
sapiens]
gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 198/249 (79%), Gaps = 1/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF +
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 169 WIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI S F ER+V FA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + ++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL
Sbjct: 181 ACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 288 VHIHQCSLF 296
V + +F
Sbjct: 241 VELGFSKVF 249
>gi|443242947|ref|YP_007376172.1| ribonucleoside-diphosphate reductase small chain [Nonlabens
dokdonensis DSW-6]
gi|442800346|gb|AGC76151.1| ribonucleoside-diphosphate reductase small chain [Nonlabens
dokdonensis DSW-6]
Length = 330
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/268 (60%), Positives = 209/268 (77%), Gaps = 3/268 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFI 83
QEPIL E RF +FPI++ +WE YKK QA WTAEE+DL D+ W+ L+S E++FI
Sbjct: 5 QEPILQENPNRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDLTDWQNSLNSDERYFI 64
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDD 124
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KEK +LF AIEN P + KA WA+ WI S SFAERL+ FA VEGIFFSG+FC+I+WLKK
Sbjct: 125 KEKDQLFKAIENFPAIKLKADWAMKWIESP-SFAERLIAFAAVEGIFFSGAFCSIYWLKK 183
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+
Sbjct: 184 RGLMPGLTFSNELISRDEGMHCDFAVHLHNHHLVNKVPKERITEIIVDALNIEREFITES 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP +LIGMN+ LM+QY++FV DRLLV +
Sbjct: 244 LPASLIGMNAKLMTQYLEFVTDRLLVEL 271
>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe 972h-]
gi|9297110|sp|P36603.2|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe]
Length = 391
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/273 (61%), Positives = 212/273 (77%), Gaps = 2/273 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
G++E E E +L RF +FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D+ W+ L+
Sbjct: 58 GKKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLN 117
Query: 78 S-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+ E++FIS VLA+FAASDGIV ENL RF +++QIPEAR YGFQI +ENIHSE YSLLL
Sbjct: 118 ADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLL 177
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI++ KEK R F+AI + + KAKWAL WI+ DS +A RLV FA VEGIFFSGSF
Sbjct: 178 DTYIREPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSF 237
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELI RDEGLH DFACL++S L+ R + V ++ EAV+IE
Sbjct: 238 ASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIE 297
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
++ +ALP +L+GMN LM QYI+FVADRLLV
Sbjct: 298 KEYFTDALPVSLLGMNKDLMCQYIEFVADRLLV 330
>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
Length = 388
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/271 (59%), Positives = 203/271 (74%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+++ EPIL RF +FP++Y ++WE+YKKAQ S WTAEEVDLS+D+ W+ L D+E+
Sbjct: 70 EDEYEPILASTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNDNEQK 129
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIK
Sbjct: 130 FIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQSHNEMVHGETYSKLIDKYIK 189
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D EK +LF AI+ +PC+ +KA WAL W S FAERL FACVEGIFFSGSFCAIFWL
Sbjct: 190 DGAEKKQLFEAIQTVPCIERKANWALKWFDKSRPFAERLFAFACVEGIFFSGSFCAIFWL 249
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGL FSNELISRDEGLH +FA L+ LLR + + +H +V EAVEIE F+ +
Sbjct: 250 KKRGLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTETIHSIVKEAVEIEKNFILD 309
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
ALPC LIGMNS MS+YI++V+DRLL + Q
Sbjct: 310 ALPCNLIGMNSEKMSEYIEYVSDRLLKQVGQ 340
>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
Length = 297
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 198/249 (79%), Gaps = 1/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF +
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 169 WIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI S F ER+V FA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + ++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL
Sbjct: 181 ACLMFQYLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 288 VHIHQCSLF 296
V + +F
Sbjct: 241 VELGFSKVF 249
>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
cerevisiae]
Length = 399
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 211/274 (77%), Gaps = 8/274 (2%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE---EVDLSQDVQHWE-RL 75
+E E +EP+L E +R +FPI+Y ++W+ Y +ASFWTAE E+DLS+D+ W R+
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAY---EASFWTAETAEEIDLSKDIHDWNNRM 126
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
++E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL
Sbjct: 127 NENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLL 186
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGS 194
++TYIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGS
Sbjct: 187 IDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGS 246
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
F +IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEI
Sbjct: 247 FASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEI 306
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
E ++ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 307 EQRYFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>gi|298207002|ref|YP_003715181.1| ribonucleoside-diphosphate reductase small chain [Croceibacter
atlanticus HTCC2559]
gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
[Croceibacter atlanticus HTCC2559]
Length = 325
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 206/262 (78%), Gaps = 3/262 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL + RF +FPI++ +WE YKK +A FWTAEE+DL QD+ W +L D E++FI
Sbjct: 5 EPILQKNENRFVIFPIQHNDIWEWYKKMEACFWTAEEIDLHQDLTDWNSKLNDDERYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF AIE P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFRAIEVFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+ E+L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNKHLVNKVSKERIREIIVDALNIEREFITESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADR 285
P +LIGMNS+LM+QY++FV DR
Sbjct: 244 PASLIGMNSNLMTQYLEFVTDR 265
>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 394
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 161/271 (59%), Positives = 209/271 (77%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+++E EP+L R ++PI+Y ++W+ YKK+ ASFWTAEE+DLS+D+ W ++ ++
Sbjct: 65 KQEESNEPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNKMNEN 124
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++ Y FQI MENIHSE YSLL+ET
Sbjct: 125 ERFFISRVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIET 184
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
Y KD +E LFNAI+NIP + +KA WA+ WI S D+ +AERLV FA VEGIFFSGSF A
Sbjct: 185 YFKDPEEADFLFNAIDNIPFIRKKADWAIRWIQSEDALYAERLVAFAAVEGIFFSGSFAA 244
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEG+H D+ACLL+S L+ + + + ++ EAV+IE +
Sbjct: 245 IFWLKKRGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSSEIIEKIITEAVDIEKE 304
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP +L+GMN LM QY++FVADRLLV
Sbjct: 305 YFSDALPVSLLGMNCDLMCQYVEFVADRLLV 335
>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
Length = 297
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 196/249 (78%), Gaps = 1/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF +
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 169 WIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
WI S F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACL++ L + +V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL
Sbjct: 181 ACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLL 240
Query: 288 VHIHQCSLF 296
+ +F
Sbjct: 241 GELGFSKIF 249
>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
Length = 394
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/279 (58%), Positives = 213/279 (76%), Gaps = 4/279 (1%)
Query: 12 VNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQH 71
VN+R+ +++E EP+L + R ++PI+Y ++W+ YKK+ ASFWTAEE+DLS+D+
Sbjct: 59 VNRRKL--KQEESNEPLLTKDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLAD 116
Query: 72 WE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 130
W ++ ++E+ FIS VLAFFAASDGIV ENL F ++QIPEA++ Y FQI MENIHSE
Sbjct: 117 WNNKMNENERFFISRVLAFFAASDGIVNENLVENFCAEVQIPEAQSVYKFQIMMENIHSE 176
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGI 189
YSLL+ETY KD +E LFNAIENIP + +KA WA+ WI D+ +AERLV FA VEGI
Sbjct: 177 TYSLLIETYFKDPEEADFLFNAIENIPFIREKADWAIRWIQDEDALYAERLVAFAAVEGI 236
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSGSF AIFWLKKRGLMPGLTFSNELI RDEG+H D+ACLL+S L+ + + + ++
Sbjct: 237 FFSGSFAAIFWLKKRGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSPEIIEKIIT 296
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
EAV IE ++ +ALP +L+GMN LM QY++FVADRLLV
Sbjct: 297 EAVTIEKKYFSDALPVSLLGMNCDLMCQYVEFVADRLLV 335
>gi|325286576|ref|YP_004262366.1| ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
Length = 328
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/268 (60%), Positives = 213/268 (79%), Gaps = 3/268 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL + RF +FPI++ +W+ YKK +ASFWTAEE+DL D+ W+ +L D E++FI
Sbjct: 6 EPILEKNEDRFVIFPIKHNDLWDWYKKCEASFWTAEEIDLHADLDDWKNKLNDDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F++++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK LF+A+EN P + +KA WAL WI S SFAERL+ FA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKDILFHALENFPAIRKKADWALKWIESP-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCD+A L++ L ++ +++ ++ +A++IE +F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNHHLINKVPKERITEILVDALDIEREFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIH 291
P +LIGMNS LM+QY++FV DRLLV ++
Sbjct: 245 PVSLIGMNSKLMTQYLEFVTDRLLVELN 272
>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 297
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/249 (66%), Positives = 198/249 (79%), Gaps = 2/249 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEE+DL++D++ W+ L +E+HF+SH+LAFFAASDGIV ENL F +
Sbjct: 1 MYKKAEASFWTAEEIDLAEDLKDWDALTANERHFVSHILAFFAASDGIVNENLTGNFSTE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
+ PEAR FYGFQIA+ENIHSE YSLL++TYIKDS EK+ L NAIE +PCV +KA WAL
Sbjct: 61 VTSPEARCFYGFQIAVENIHSETYSLLIDTYIKDSTEKNHLLNAIETVPCVQKKAHWALK 120
Query: 169 WIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
W + + SFAER++ FA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDAGNASFAERMIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACLLYS L +L ++ ++ AVEIE +FV +ALP LIGMNS LM YI+F ADRLL
Sbjct: 181 ACLLYSKLVNKLPESRITKIITVAVEIEKEFVSDALPVELIGMNSKLMCDYIEFCADRLL 240
Query: 288 VHIHQCSLF 296
+ CS F
Sbjct: 241 GAL-GCSKF 248
>gi|367007082|ref|XP_003688271.1| hypothetical protein TPHA_0N00560 [Tetrapisispora phaffii CBS 4417]
gi|357526579|emb|CCE65837.1| hypothetical protein TPHA_0N00560 [Tetrapisispora phaffii CBS 4417]
Length = 398
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/268 (61%), Positives = 208/268 (77%), Gaps = 2/268 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
E EP+L + +R + PI+Y ++E YK+A+ASFWTAEE+DLS+D+ W ER+ +E+
Sbjct: 70 EKLEPLLNKDKKRHLVHPIKYPDIYETYKRAEASFWTAEEIDLSKDLYDWNERMNSNERF 129
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL F +IQ+PEAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 130 FISRVLAFFAASDGIVNENLTENFSVEIQVPEARYFYGFQIMIENIHSETYSLLIDTYIK 189
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE LFNAI+ IP + +KA+WAL WI+ ++ F ERLV FA +EG+FFSGSF +IFW
Sbjct: 190 DPKESSFLFNAIDYIPQIKEKAEWALRWINDDEALFGERLVAFASIEGVFFSGSFASIFW 249
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELI RDEGLH DFAC+L++ L+ + V +V EAV IE ++
Sbjct: 250 LKKRGLMPGLTFSNELICRDEGLHTDFACILFAHLKNKPDPAIVEKIVTEAVGIEKRYFL 309
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLV 288
+ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 DALPVALLGMNAKLMTQYVEFVADRLLV 337
>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|51701822|sp|Q8SRR2.1|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
Length = 325
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 164/271 (60%), Positives = 214/271 (78%), Gaps = 3/271 (1%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E+ E +L + +RF + PI+Y +W+MYKKA++SFWT EEV L +D+ W +L E+HF
Sbjct: 5 EETELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHF 64
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
IS+VLAFFAASDGIV NL RF ++++ EAR FYGFQ+A+ENIHSEMYSLL++TYI+D
Sbjct: 65 ISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRD 124
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWL 201
+ EK+ LF+AI IP V +KA WA+ WI +S FA RLV FACVEGIFFSG+F +IFWL
Sbjct: 125 NDEKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHC+FACLL+ L+K+ + ++ +V +AVEIE +F+ E
Sbjct: 185 KKRGLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSE 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+LP LIGMN +LM +YI+FVADRLL ++ +
Sbjct: 243 SLPVNLIGMNCNLMCRYIEFVADRLLENLGE 273
>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
Length = 323
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 163/266 (61%), Positives = 208/266 (78%), Gaps = 3/266 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
QEPIL + RF +FPI++ +WE YKK QA FWTAEE+DL D+ W +L D E++FI
Sbjct: 4 QEPILQPNDNRFVIFPIQHNDLWEWYKKQQACFWTAEEIDLHSDLVDWTTKLTDDERYFI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDE 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK RLF AIE P + +KA WAL WI S+SFAERL+ FA VEGIFFSG+FC+IFWLKK
Sbjct: 124 VEKDRLFRAIEVFPAIKKKADWALKWIE-SESFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGL+PGLTFSNELISRDEG+HCDFA L++ + R+ ++ ++ +A++IE +FV E+
Sbjct: 183 RGLLPGLTFSNELISRDEGMHCDFAVHLHNNHIVNRVPKDRIKEIIVDALDIEREFVTES 242
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLV 288
LP +LIGMN+ LM+QY++FV DRLL+
Sbjct: 243 LPVSLIGMNAKLMTQYLEFVTDRLLL 268
>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
Length = 328
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 162/270 (60%), Positives = 212/270 (78%), Gaps = 4/270 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +A FWTAEE+DLS+D+ W +L + E++F+
Sbjct: 6 EPILTENPDRFVIFPIKHDDLWEWYKKCEACFWTAEEIDLSEDLNDWNNKLNEDERYFVK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F++++Q EA+ FYGFQI MENIHSE YSLL++TY+KD K
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK++LF A+EN P + +KA WAL WI S SFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKNKLFKALENFPAIKEKADWALKWIESP-SFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCD+A L++ L ++ ++ ++ +A+ IE F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNHHLINKVPKARIREILVDALNIERTFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQC 293
P +LIGMN+ LM+QY++FV DRLLV + QC
Sbjct: 245 PASLIGMNAKLMTQYLEFVTDRLLVEL-QC 273
>gi|449329429|gb|AGE95701.1| ribonucleoside diphosphate reductase small chain [Encephalitozoon
cuniculi]
Length = 325
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 164/271 (60%), Positives = 214/271 (78%), Gaps = 3/271 (1%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E+ E +L + +RF + PI+Y +W+MYKKA++SFWT EEV L +D+ W +L E+HF
Sbjct: 5 EETELLLDPREERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHF 64
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
IS+VLAFFAASDGIV NL RF ++++ EAR FYGFQ+A+ENIHSEMYSLL++TYI+D
Sbjct: 65 ISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRD 124
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWL 201
+ EK+ LF+AI IP V +KA WA+ WI +S FA RLV FACVEGIFFSG+F +IFWL
Sbjct: 125 NDEKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHC+FACLL+ L+K+ + ++ +V +AVEIE +F+ E
Sbjct: 185 KKRGLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSE 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+LP LIGMN +LM +YI+FVADRLL ++ +
Sbjct: 243 SLPVNLIGMNCNLMCRYIEFVADRLLENLGE 273
>gi|443893923|dbj|GAC71111.1| ribonucleotide reductase, beta subunit [Pseudozyma antarctica T-34]
Length = 280
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/250 (66%), Positives = 201/250 (80%), Gaps = 2/250 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLN 107
MYKKA+ASFWTAEE+DLS+D+ W+ +L D+E+HFISHVLAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAASDGIVNENLVERFSS 60
Query: 108 DIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWAL 167
++Q EAR FYGFQI MENIHSE YSLL++TYI++ +++ LF+A+E IP V +KA WAL
Sbjct: 61 EVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQRELLFDAVETIPVVKKKADWAL 120
Query: 168 DWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 226
WI +FAERLV FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH D
Sbjct: 121 RWISDRRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTD 180
Query: 227 FACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRL 286
FACLL+S L+KR H V ++ EAVEIE +F+ EALPC+LIGMN+ LM QYI++VADRL
Sbjct: 181 FACLLFSHLKKRAHPDTVLKIITEAVEIEQKFLSEALPCSLIGMNAKLMCQYIEYVADRL 240
Query: 287 LVHIHQCSLF 296
L + F
Sbjct: 241 LTQLGNAPHF 250
>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
Length = 391
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/273 (61%), Positives = 212/273 (77%), Gaps = 2/273 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
G++E E E +L RF +FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D+ W+ L+
Sbjct: 58 GKKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLN 117
Query: 78 S-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+ E++FIS VLA+FAASDGIV ENL RF +++QIPEAR YGFQI +ENIHSE YSLLL
Sbjct: 118 ADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLL 177
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI++ KEK R F+AI + + KAKWAL WI+ DS +A RLV FA VEGIFFSGSF
Sbjct: 178 DTYIREPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSF 237
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELI RDEGLH DFACL++S L+ R + + ++ EAV+IE
Sbjct: 238 ASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKLLKPIIVEAVDIE 297
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
++ +ALP +L+GMN LM QYI+FVADRLLV
Sbjct: 298 KEYFTDALPVSLLGMNKDLMCQYIEFVADRLLV 330
>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
Length = 317
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/252 (63%), Positives = 198/252 (78%), Gaps = 2/252 (0%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE- 73
+ + +E E +EP L E QRF +FPI+Y+++W+MYKKA+ASFWTAEE+DLS+D+ W
Sbjct: 66 KPKTPKELEAEEPRLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNN 125
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
RL D E+ FISHVLAFFAASDGIV ENL RF N++Q+PEAR FYGFQI MENIHSE YS
Sbjct: 126 RLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYS 185
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
LL++TYIK+ K++ LF AI+ IPC+ +KA WA+ WI +S F++RLV FA VEGIFFS
Sbjct: 186 LLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFSQRLVAFAAVEGIFFS 245
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
GSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R V ++ EAV
Sbjct: 246 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPNAVEAIITEAV 305
Query: 253 EIETQFVCEALP 264
IE +F+ +ALP
Sbjct: 306 TIEQEFLTDALP 317
>gi|393911948|gb|EFO23522.2| ribonucleoside-diphosphate reductase [Loa loa]
Length = 365
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/276 (58%), Positives = 208/276 (75%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ + E +L E RF +FPI++ +W+ YKKA ASFWT +EVDLS+D + WE L D E+H
Sbjct: 42 ESNGEILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERH 101
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYS +++TYI+
Sbjct: 102 FISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSEMYSKMIDTYIR 161
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K+K LFNAI V +KA WAL WI + +AERL+ FA VEGIFFSGSF AIFW
Sbjct: 162 DQKQKSLLFNAIYEFEFVKKKADWALCWIADIKAPYAERLIAFAAVEGIFFSGSFAAIFW 221
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLT SNELISRDEGLH DFACLLY+ ++ + ++++ ++ EAV+IE +++
Sbjct: 222 LKKRGLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEERIYQIIREAVDIEKEYLT 281
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIG+N LM QYI++VAD LL +H ++
Sbjct: 282 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKMY 317
>gi|401826656|ref|XP_003887421.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
gi|395459939|gb|AFM98440.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
Length = 324
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/276 (60%), Positives = 210/276 (76%), Gaps = 4/276 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF +FPI+Y +W++YKKA++SFWT EEV L +D++ W +L EKHFISH
Sbjct: 6 EPLLNPEEERFVLFPIKYIDIWKLYKKAESSFWTVEEVTLDKDIEDWGKLNAGEKHFISH 65
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV NL RF N+++I EA+ FYGFQ+A+ENIHSEMYSLL++TYIKD+ E
Sbjct: 66 VLAFFAASDGIVNLNLLERFSNEVKILEAKFFYGFQMAIENIHSEMYSLLIDTYIKDAAE 125
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAI+NIP V KA WA+ WI D SFA RLV FACVEGIFFSG+F +IFWLKKR
Sbjct: 126 KDFLFNAIKNIPSVGDKADWAIRWIEDKDSSFATRLVAFACVEGIFFSGAFASIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLHC+FAC L+ LR + + +V +AV IE F+ +L
Sbjct: 186 GLMPGLTFSNELISRDEGLHCEFACHLHRYHLRNKC--TRTKEIVMDAVRIEKDFLSNSL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
P LIGMN LM +YI+FVAD LL ++ + ++ A
Sbjct: 244 PVKLIGMNCDLMCKYIEFVADTLLENLGEEKIYHTA 279
>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
Length = 325
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 209/267 (78%), Gaps = 3/267 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFIS 84
EPIL E RF +FPI++ +W+ YKK +A FWTAEE+DL +D+ W L + E++F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEACFWTAEEIDLHEDLSDWNNKLSADERYFLK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+K+ K
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKNEK 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF AIE P + +KA WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFKAIEVFPAIKKKADWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +K+ ++ +A+ IE +FV E+L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNQHLVNQVPKEKIREILIDALNIEREFVTESL 243
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN+ LM+QY++FV DRLLV +
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVEL 270
>gi|402589750|gb|EJW83681.1| ribonucleoside-diphosphate reductase [Wuchereria bancrofti]
Length = 365
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/276 (59%), Positives = 207/276 (75%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ + E +L E RF +FPI++ +W YKKA ASFWT +EVDLS+D + WE L D E+H
Sbjct: 42 ETNGEILLAENPNRFVIFPIKFHDIWGFYKKALASFWTVDEVDLSKDYRDWENLNDGERH 101
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +ENIHSEMYS +++TYI+
Sbjct: 102 FISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIR 161
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFW 200
D K+K LFNAI V +KA WAL WI + S+AERL+ FA VEGIFFSGSF AIFW
Sbjct: 162 DQKQKSLLFNAIYEFEFVKKKADWALCWIADINASYAERLIAFAAVEGIFFSGSFAAIFW 221
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLT SNELISRDEGLH DFACLLY+ ++ + +++ ++ EAV+IE +++
Sbjct: 222 LKKRGLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEGRIYQIIREAVDIEKEYLT 281
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIG+N LM QYI++VAD LL +H ++
Sbjct: 282 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY 317
>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 330
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 215/291 (73%), Gaps = 3/291 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE+YK +++FWT EEVD++ D
Sbjct: 10 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEVYKMHESTFWTVEEVDMTFD 68
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 69 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 128
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FACVEG
Sbjct: 129 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEG 188
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + + + +V
Sbjct: 189 IFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKC--TVIEDIV 246
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++ ++
Sbjct: 247 REAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS 297
>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
Length = 326
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/276 (59%), Positives = 216/276 (78%), Gaps = 2/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E EP+L + +RF +FPI+++ VW MYKKA++SFWT EEV L +D++ W++L EKH
Sbjct: 4 EEKIEPLLDPKEERFVLFPIQHEDVWRMYKKAESSFWTVEEVLLDKDIEDWKKLNPKEKH 63
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS+VLAFFAASDGIV NL RF +++++ EA+ FYGFQIA+ENIHSEMYSLL++TY++
Sbjct: 64 FISNVLAFFAASDGIVNLNLVERFSSEVKMLEAKLFYGFQIAIENIHSEMYSLLIDTYVR 123
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D ++K LFNA++ IP V KA WA+ WI +S FA RLV FACVEGIFFSGSF +IFW
Sbjct: 124 DGEQKKFLFNAVKTIPSVKDKADWAIKWIEDKNSDFATRLVAFACVEGIFFSGSFASIFW 183
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHC+FACLL+ K+ ++V +V +AVE+E +F+
Sbjct: 184 LKKRGLMPGLTFSNELISRDEGLHCEFACLLHRRYLKQ-KCKRVKEVVMDAVEVEKRFLS 242
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
E+LP LIGMN LM +YI+FVAD LL ++ + ++
Sbjct: 243 ESLPVDLIGMNCQLMCKYIEFVADTLLENLEEEKIY 278
>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 1]
Length = 324
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/267 (59%), Positives = 213/267 (79%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L E + RF MFPI + +W+MYKK FW AEE+D S+D+ HW +L E+++I
Sbjct: 6 NEPLLTEDDNRFVMFPIVDEAIWKMYKKQVDCFWRAEEIDTSKDLNHWNKLQPEEQYYIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
+LAFFA+SDGIVLENL RF+N++Q+ EARAFYGFQIAMENIHSE YSLL+++YIKD
Sbjct: 66 MILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSYIKDEN 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK++LF+++E+ PC+ +K KWA+ WI+ S F+ RLV FACVEGIFFSG+FC+I+WLKK
Sbjct: 126 EKNKLFHSLEHFPCIEKKGKWAMKWINDKKSNFSTRLVAFACVEGIFFSGAFCSIYWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RG+MPGLTFSNELISRDE LH +FA L+ L K+++ +K+ ++ EAV IE +F+ E+L
Sbjct: 186 RGIMPGLTFSNELISRDEALHTEFAVHLFHKLEKKINKKKIREIIEEAVVIEKEFIVESL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC LIGMNS LM+QYI++VADRL++ +
Sbjct: 246 PCRLIGMNSDLMTQYIEYVADRLMIQL 272
>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
Length = 330
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/268 (60%), Positives = 207/268 (77%), Gaps = 3/268 (1%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EK 80
Q QEPIL E RF +FPI++ +WE YKK QA WTAEE+DL D+ W+ L+S E+
Sbjct: 2 QTTQEPILQENPDRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDITDWQNSLNSDER 61
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+FI H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYV 121
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFW 200
KD EK +LF AIEN P + KA WA+ WI S SFAERL+ FA VEGIFFSG+FC+I+W
Sbjct: 122 KDDAEKDQLFRAIENFPAIKLKADWAMKWIESP-SFAERLIAFAAVEGIFFSGAFCSIYW 180
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRKRLHWQKVHHMVHEAVEIETQFV 259
LKKRGLMPGLTFSNELISRDEG+HCDFA L++ L ++ +++ ++ +A+ IE +F+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHCDFAVHLHNHHLVNKVPKERITEIIVDALNIEREFI 240
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLL 287
E+LP +LIGMN+ LM+QY++FV DRLL
Sbjct: 241 TESLPASLIGMNAKLMTQYLEFVTDRLL 268
>gi|388548908|gb|AFK66109.1| ribonucleotide reductase R2 [Ostreococcus lucimarinus virus OlV3]
Length = 358
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/270 (59%), Positives = 204/270 (75%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E+ EPIL RF +FP++Y Q+WE+YKKAQ S WTAEEVDLS+D+ W+ L ++EK
Sbjct: 39 EEEYEPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKK 98
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIK
Sbjct: 99 FIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIK 158
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
D EK +LF AI+ +PC+ +KAKWA+ W + S SFAERL FACVEGIFFSGSFCAI+W
Sbjct: 159 DGSEKKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYW 218
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL FSNELISRDEGLH +FA L+ LR R + +H +V EAVEIE F+
Sbjct: 219 LKKRGLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFIL 278
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPC LIGMNS MS+YI++V+DRLL +
Sbjct: 279 DALPCNLIGMNSEKMSEYIEYVSDRLLKQV 308
>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 214/291 (73%), Gaps = 3/291 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE YK +++FWT EEVD++ D
Sbjct: 10 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFD 68
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 69 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 128
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FACVEG
Sbjct: 129 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEG 188
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + + + +V
Sbjct: 189 IFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKC--TVIEDIV 246
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++ ++
Sbjct: 247 REAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS 297
>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 214/291 (73%), Gaps = 3/291 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE YK +++FWT EEVD++ D
Sbjct: 38 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFD 96
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 97 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 156
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FACVEG
Sbjct: 157 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEG 216
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + + + +V
Sbjct: 217 IFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKC--TVIEDIV 274
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++ ++
Sbjct: 275 REAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS 325
>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 336
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/288 (58%), Positives = 212/288 (73%), Gaps = 3/288 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE YK +++FWT EEVD++ D
Sbjct: 10 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFD 68
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 69 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 128
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FACVEG
Sbjct: 129 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEG 188
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + + + +V
Sbjct: 189 IFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKC--TVIEDIV 246
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++
Sbjct: 247 REAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGERKIY 294
>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
Length = 296
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 192/239 (80%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFW EE+DLSQD + WE L D E+HFI +VLAFFAASDGIV+ENLA FL +
Sbjct: 1 MYKKAEASFWVTEEIDLSQDTRDWESLKDPERHFIKYVLAFFAASDGIVMENLAVNFLRE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
IQIPEAR +Y FQ+++E IHSE YSLL++ YI D KE+ LF AI +I V +KA+WA
Sbjct: 61 IQIPEARMYYAFQMSIEQIHSETYSLLIDRYITDIKERQMLFEAISHIEAVKKKAEWATK 120
Query: 169 WIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 228
W++S SFAER++GF VEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH DFA
Sbjct: 121 WMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHADFA 180
Query: 229 CLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
CL+Y L+ +L +V ++ EAVE+E F+C++LP LIGMNS LM+QYI+FVADRLL
Sbjct: 181 CLIYKALKFKLPAPRVQQIISEAVEVERNFLCDSLPVDLIGMNSRLMAQYIEFVADRLL 239
>gi|396081544|gb|AFN83160.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
romaleae SJ-2008]
Length = 326
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/276 (60%), Positives = 210/276 (76%), Gaps = 10/276 (3%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF +FPI+Y +W +YKKA++SFWT EEV L +DV+ W RL EKHFISH
Sbjct: 8 EPLLNPEEERFVLFPIKYDDIWALYKKAESSFWTVEEVSLDKDVEDWGRLNAKEKHFISH 67
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV NL RF ++++I EAR FYGFQ+A+E+IHSEMYSLL+ETYI++++E
Sbjct: 68 VLAFFAASDGIVNLNLVERFSSEVKILEARFFYGFQVAIESIHSEMYSLLIETYIRNAEE 127
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAI+NIP V KA WA+ WI DS FA RLV FACVEGIFFSG+F +IFWLKKR
Sbjct: 128 RDFLFNAIKNIPSVKDKADWAIKWIEDKDSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQ----KVHHMVHEAVEIETQFVC 260
GLMPGLTFSNELISRDEGLHC+FAC L+ R H + +V +AV IE +F+
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACHLH-----RYHLNNKCTRTKEVVMDAVRIEKRFLS 242
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
E+LP LIGMN LM +YI+FVAD LL ++ + ++
Sbjct: 243 ESLPVNLIGMNCELMCRYIEFVADTLLENLGEEKIY 278
>gi|392575953|gb|EIW69085.1| hypothetical protein TREMEDRAFT_31348 [Tremella mesenterica DSM
1558]
Length = 446
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/254 (64%), Positives = 198/254 (77%), Gaps = 1/254 (0%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAAS 93
RF +FPIRY+++W+ YK +QASFWTAEE+DL D+ W ERL ++E+ FI +LAFFAAS
Sbjct: 113 RFVLFPIRYREIWQAYKASQASFWTAEELDLVHDMHDWNERLTENERFFILRILAFFAAS 172
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
DGIV EN+ +F ++QI EARAFY FQ ME +HSE YSLL+ETY++D++EK LF I
Sbjct: 173 DGIVGENIVEQFALEVQIAEARAFYSFQSMMEQVHSETYSLLIETYVRDTQEKDFLFRGI 232
Query: 154 ENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 213
ENIPC+ +KA WAL +I F RLV FACVEGIFFSGSF AIFWLKKRGLMPGLTFS
Sbjct: 233 ENIPCIRKKADWALKYITPELPFRVRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFS 292
Query: 214 NELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSS 273
NELISRDEG H DFACLLY L R ++VH +V EAV IE +F+ +ALP LIG+N+S
Sbjct: 293 NELISRDEGTHTDFACLLYDHLHHRCSTEQVHDIVSEAVVIEKEFLVDALPSHLIGINAS 352
Query: 274 LMSQYIKFVADRLL 287
LM QYI+FVADRL+
Sbjct: 353 LMCQYIEFVADRLV 366
>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
Length = 408
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 161/269 (59%), Positives = 203/269 (75%), Gaps = 1/269 (0%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E+ EPIL RF +FP++Y Q+WE+YKKAQ S WTAEEVDLS+D+ W+ L ++EK F
Sbjct: 90 EEYEPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKF 149
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIKD
Sbjct: 150 IKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKD 209
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWL 201
EK +LF AI+ +PC+ +KAKWA+ W + S SFAERL FACVEGIFFSGSFCAI+WL
Sbjct: 210 GSEKKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWL 269
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGL FSNELISRDEGLH +FA L+ LR R + +H +V EAVEIE F+ +
Sbjct: 270 KKRGLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILD 329
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
ALPC LIGMNS MS+YI++V+DRLL +
Sbjct: 330 ALPCNLIGMNSEKMSEYIEYVSDRLLKQV 358
>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
Length = 393
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/298 (54%), Positives = 206/298 (69%), Gaps = 2/298 (0%)
Query: 4 LKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEV 63
L + E V G E+ + RF +FPI+ +W MYK+A+ASFWTAEEV
Sbjct: 50 LYEQAEVAVPSAWNGTARSEELPWFCARDSSRFTLFPIKDAGLWAMYKRAEASFWTAEEV 109
Query: 64 DLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIA 123
DL QD QHWE+L + E++F+S VLAFFAASDGIVLENL RF ++ +PEAR FY FQ A
Sbjct: 110 DLGQDKQHWEQLDEGERYFLSRVLAFFAASDGIVLENLVERFAQEVTLPEARFFYAFQGA 169
Query: 124 MENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183
+E +H EMYSLLLETY++D E+ L A + +PCV KA WA+ W S +A RL+ F
Sbjct: 170 IEGVHQEMYSLLLETYVEDPGEREALTRAHDLMPCVKAKADWAMKWTASDAPYAARLLAF 229
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--RLHW 241
A VEG+FFSGSFCAIFWL+KRG++PGL F+NELISRDEGLHCDFAC LYS L RL
Sbjct: 230 AAVEGVFFSGSFCAIFWLRKRGILPGLGFANELISRDEGLHCDFACALYSRLPGHLRLSD 289
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+ ++ EAV+ E FV +ALP +L+GMN+ LM+ Y+KFVADRLL + ++ A
Sbjct: 290 AEATAIISEAVDTEVDFVTDALPVSLVGMNAKLMTDYVKFVADRLLASLGHPKIYGAA 347
>gi|388548650|gb|AFK65852.1| ribonucleotide reductase R2 [Ostreococcus lucimarinus virus OlV6]
Length = 389
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/266 (60%), Positives = 201/266 (75%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FP++Y Q+WE+YKKAQ S WTAEEVDLS+D+ W+ L ++EK FI +
Sbjct: 74 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K +LF AI+ +PC+ +KAKWA+ W + S SFAERL FACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGL FSNELISRDEGLH +FA L+ LR R + +H +V EAVEIE F+ +ALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
C LIGMNS MS+YI++V+DRLL +
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQV 339
>gi|403277257|ref|XP_003930289.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Saimiri boliviensis boliviensis]
Length = 668
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/289 (55%), Positives = 206/289 (71%), Gaps = 1/289 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
+ V + + + EP+L E F +FPI Y +W+ YKK +ASFWT +EVDLS+D
Sbjct: 332 QEPVEPKTRAATPRMQDEPLLRENPHHFVIFPIEYPDIWQTYKKGEASFWTTKEVDLSKD 391
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
V HWE L ++FISHVLAFFAAS GIV ENL RF ++QI EA FYGFQ+AM+NIH
Sbjct: 392 VWHWESLKPEGRYFISHVLAFFAASYGIVNENLVERFSQEVQITEAHCFYGFQMAMKNIH 451
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVE 187
SE+YSLL++TYIKD E+ LFNAIE +PCV +KA WAL W+ + ++ E + FA VE
Sbjct: 452 SEIYSLLIDTYIKDPNEREFLFNAIETMPCVKKKADWALLWVGDKEATYGEHVAAFAAVE 511
Query: 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHM 247
GIFFSGSF +IFWLKKRGLMPGLTFSNEL RDEGLHCDFACL++ + ++V +
Sbjct: 512 GIFFSGSFASIFWLKKRGLMPGLTFSNELTGRDEGLHCDFACLMFKHQVHKPSEERVREI 571
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ AV +E +F+ EALP LIGMN +LM QYI+FVADRL++ + +F
Sbjct: 572 IISAVRMEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSRVF 620
>gi|356927835|gb|AET42625.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 202]
Length = 325
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/267 (58%), Positives = 199/267 (74%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L + RF +FPI +K ++E YKKA+AS W E+D+S D W +L ++E+HFI
Sbjct: 2 SEPLLNDNPDRFALFPIVHKDIYEEYKKAEASIWGVAEIDISTDKIDWPKLTENEQHFIK 61
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++LAFFA +DG+VLENLA F ++Q PEAR FY FQI +E +H+E Y+++L+T++ D
Sbjct: 62 YILAFFATADGVVLENLATNFATEVQYPEARCFYNFQIFIETVHAETYAMMLQTFVDDRD 121
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E LF AI IP + QKA WAL WI S SFAERL+ FA VEGIFFSG+FCAIFWLKKR
Sbjct: 122 ELRSLFRAIHTIPSIKQKADWALKWISSDRSFAERLIAFAVVEGIFFSGAFCAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEGLH DFAC+LY + +L ++ V +V AVE+E QF+CEAL
Sbjct: 182 GLMPGLTFSNELISRDEGLHTDFACMLYRDHIINKLPYETVLDIVTSAVELERQFICEAL 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIG+NS MS YIKFVADRL + +
Sbjct: 242 PVSLIGINSESMSTYIKFVADRLFISL 268
>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 296
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/243 (67%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLND 108
MYKKA+ASFWTAEE+DL+ D+Q W++L +E+HF+SHVLAFFAASDGIV ENLA F +
Sbjct: 1 MYKKAEASFWTAEEIDLAGDLQDWDKLSSNERHFVSHVLAFFAASDGIVNENLAGNFATE 60
Query: 109 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALD 168
IQ EAR FYGFQIA+ENIHSE YSLL++TY++D+ EK L +AIE +PCV +KA WAL
Sbjct: 61 IQSAEARCFYGFQIAVENIHSETYSLLIDTYVRDAAEKDHLLHAIETVPCVQKKASWALQ 120
Query: 169 WIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227
W ++ SFAER V FA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDANHASFAERCVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDF 180
Query: 228 ACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
ACLLYS L+ +L ++ ++ +AV IE +FV +ALP LIGMNS+LM +YI+F ADRLL
Sbjct: 181 ACLLYSKLQNQLPVARIVEIITDAVTIEQEFVQDALPVELIGMNSTLMCRYIEFCADRLL 240
Query: 288 VHI 290
V +
Sbjct: 241 VAL 243
>gi|370703011|ref|YP_004956813.1| orf65 gene product [Helicoverpa zea nudivirus 2]
gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
gi|365199608|gb|AEW69614.1| ribonuclease reductase [Helicoverpa zea nudivirus 2]
Length = 333
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/267 (61%), Positives = 204/267 (76%), Gaps = 5/267 (1%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVL 87
L E + RF +FPIRY +WEMYKKAQASFWT EEVDLS+D+ WE RL ++E+ FISH+L
Sbjct: 13 LEEPSSRFTLFPIRYHDIWEMYKKAQASFWTVEEVDLSKDLYDWETRLTETEREFISHIL 72
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA SDGIV +NL RF ++ IPE FYGFQI +EN+HSEMYS L++ YI+D + KH
Sbjct: 73 AFFAGSDGIVNDNLLTRFSQELTIPEVSCFYGFQIMIENVHSEMYSTLIDMYIRDPQRKH 132
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
LFNAI+ +P + +KA+W + WI S+A+RLV FA VEGIFFSGSF AIFWLKKRGL
Sbjct: 133 MLFNAIDTVPSIRKKAQWVIRWIDDDKSSYADRLVAFAAVEGIFFSGSFAAIFWLKKRGL 192
Query: 207 MPGLTFSNELISRDEGLHCDFACLLY-SLLRK--RLHWQKVHHMVHEAVEIETQFVCEAL 263
MPGLT SNE ISRDEGLHCDFA LL+ + LR R +KV ++V +AV IE +F+ E+L
Sbjct: 193 MPGLTHSNEFISRDEGLHCDFAILLFRNYLRPECRSSDEKVINIVTDAVRIEQEFLTESL 252
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P ++IGMN LM +YI+FVADRLL +
Sbjct: 253 PVSMIGMNCKLMCEYIEFVADRLLYEL 279
>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
Length = 392
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/275 (60%), Positives = 207/275 (75%), Gaps = 2/275 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
G++E E E +L +RF MFPI Y +W+ YKKA+ASFWTAEE+DLS+D+ W+ L+
Sbjct: 60 GKKEDEKDEVVLTPNPRRFVMFPIEYHDIWQFYKKAEASFWTAEEIDLSKDLHDWDNKLN 119
Query: 78 -SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
E++FIS VLA+FAASDGIV ENL +RF +++QI EAR YGFQI +ENIHSE YSLLL
Sbjct: 120 KDERYFISTVLAYFAASDGIVNENLLSRFSSEVQIAEARCVYGFQIMIENIHSETYSLLL 179
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI+D EK R F+AI + + KAKWAL WI +S +A RLV FA VEGIFFSGSF
Sbjct: 180 DTYIRDPYEKQRHFDAILTMGSIKAKAKWALRWIEDPESIYAVRLVAFAAVEGIFFSGSF 239
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELI RDEG+H DFACL++S L+ R + V ++ EAV IE
Sbjct: 240 ASIFWLKKRGLMPGLTFSNELICRDEGVHTDFACLMFSHLKHRPGKKVVERIIIEAVNIE 299
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ +ALP L+GMN LM QYI+FVADRLL+ +
Sbjct: 300 KEYFTDALPVYLLGMNCDLMCQYIEFVADRLLLSL 334
>gi|357541912|gb|AET84674.1| ribonucleotide reductase [Ostreococcus lucimarinus virus OlV4]
Length = 364
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/270 (58%), Positives = 204/270 (75%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E+ EP+L RF +FP++Y ++WE+YKKAQ S WTAEEVDLS+D+ W+ L ++E+
Sbjct: 45 EEEYEPLLAPTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNENEQK 104
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++Q EAR+FY +Q E +H E YS L++ YIK
Sbjct: 105 FIKYILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIK 164
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
D EK +LF AI+ +PC+ +KA WA+ W + S SFAERL FACVEGIFFSGSFCAI+W
Sbjct: 165 DGAEKKQLFEAIQTVPCIQKKANWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYW 224
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL FSNELISRDEGLH +FA L+ LLR + + +H +V EAVEIE F+
Sbjct: 225 LKKRGLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPTTETIHSIVKEAVEIEKGFIL 284
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPCALIGMNS MS+YI++V+DRLL I
Sbjct: 285 DALPCALIGMNSEKMSEYIEYVSDRLLKQI 314
>gi|429966031|gb|ELA48028.1| hypothetical protein VCUG_00451 [Vavraia culicis 'floridensis']
Length = 325
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 203/267 (76%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+E +L E ++ +FP+ + VW+MYK+A +SFWT EEVDLS+D+ W RL E+HFIS
Sbjct: 6 EESLLTEPKNKYTLFPLTNQDVWQMYKQALSSFWTVEEVDLSKDIDDWNRLNGDERHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
+VLAFFAASDGIV ENL F ++Q+ EAR FYGFQI +EN+HSEMYSLL++TYIKD +
Sbjct: 66 YVLAFFAASDGIVNENLLENFSREVQLKEARCFYGFQIMIENVHSEMYSLLIDTYIKDQE 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK LFNAI NI V +KA+W WI+ DS FA R++ FACVEG+FFSGSF +IFWLKK
Sbjct: 126 EKDFLFNAIANINTVKRKAEWCFKWINDKDSDFATRVIAFACVEGLFFSGSFASIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLH FA L+ L + +KV +V EAVEIE +FV ++L
Sbjct: 186 RGLMPGLTFSNELISRDEGLHYQFAVLMNKTLIGQCPKEKVLEIVKEAVEIEEEFVSDSL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN LM QYI+FVAD +LV +
Sbjct: 246 PVSLIGMNCKLMCQYIEFVADGILVDL 272
>gi|227541|prf||1706181A ribonucleotide reductase
Length = 290
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 193/242 (79%), Gaps = 1/242 (0%)
Query: 56 SFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEAR 115
SFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR
Sbjct: 1 SFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 60
Query: 116 AFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD- 174
FYGFQIAMENIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI +
Sbjct: 61 CFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA 120
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
++ ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 121 TYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKH 180
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCS 294
L + ++V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 181 LVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSK 240
Query: 295 LF 296
+F
Sbjct: 241 VF 242
>gi|440491857|gb|ELQ74463.1| Ribonucleotide reductase, beta subunit [Trachipleistophora hominis]
Length = 325
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 204/267 (76%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+E +L E ++ +FP+ + VW+MYK+A +SFWT EEVDLS+D+ W RL E+HFIS
Sbjct: 6 EEALLTEPTNKYTLFPLTNQDVWQMYKQALSSFWTVEEVDLSKDIDDWNRLNCDERHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
+VLAFFAASDGIV ENL F ++Q+ EAR FYGFQI +EN+HSEMYSLL++TYIKD +
Sbjct: 66 YVLAFFAASDGIVNENLLENFSREVQLKEARCFYGFQIMIENVHSEMYSLLIDTYIKDQE 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
EK LFNAI NI V +KA+W WI+ DS FA R++ FACVEG+FFSGSF +IFWLKK
Sbjct: 126 EKDFLFNAIANINTVKRKAEWCFKWINDKDSDFATRVIAFACVEGLFFSGSFASIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLH FA L+ + L R +K+ +V +AVEIE +FV ++L
Sbjct: 186 RGLMPGLTFSNELISRDEGLHYQFAVLMNNTLVNRCPKEKILEIVKDAVEIEEEFVSDSL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIGMN LM QYI+FVAD +LV +
Sbjct: 246 PVSLIGMNCKLMCQYIEFVADGILVDL 272
>gi|357542115|gb|AET84875.1| ribonucleotide reductase [Micromonas pusilla virus SP1]
Length = 389
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 205/281 (72%), Gaps = 1/281 (0%)
Query: 13 NQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
N E E +++ EPIL RF +FP++Y +WE+YKKAQ S WTAEEVDLS D+ W
Sbjct: 61 NYFEYQEYIEDEYEPILSPTLNRFTVFPLKYPGLWELYKKAQMSNWTAEEVDLSTDLSDW 120
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
+ L D+E+ FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E Y
Sbjct: 121 KTLNDNEQKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETY 180
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFF 191
S L++ YIKDS EK LF AI+ +PC+ +KA WAL W + S +F+ERL FACVEGIFF
Sbjct: 181 SKLIDKYIKDSTEKKHLFEAIQTVPCIERKANWALKWFDTKSRTFSERLFAFACVEGIFF 240
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
SGSFCAI+WLKKRGLMPGL FSNELISRDEGLH +FA L+ LLR + +H +V EA
Sbjct: 241 SGSFCAIYWLKKRGLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTDVIHSIVREA 300
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
VEIE F+ +ALPC LIGMNS MS+YI++V+DRLL + Q
Sbjct: 301 VEIEKGFILDALPCNLIGMNSDKMSEYIEYVSDRLLKQVGQ 341
>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
Length = 408
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 159/270 (58%), Positives = 203/270 (75%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E+ EP+L RF +FP++Y +WE+YKKAQ S WTAEEVDLS+D+ W+ L ++EK
Sbjct: 89 EEEYEPLLAPTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKK 148
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++Q EAR+FY +Q E +H E YS L++ YIK
Sbjct: 149 FIKYILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIK 208
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
D EK +LF AI+ +PC+ +KA WA+ W + S SFAERL FACVEGIFFSGSFCAI+W
Sbjct: 209 DGAEKKQLFEAIQTVPCIQKKADWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYW 268
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL FSNELISRDEGLH +FA L+ LLR + + +H +V EAVEIE F+
Sbjct: 269 LKKRGLMPGLCFSNELISRDEGLHQEFAVELFKLLRIKPTTETIHSIVKEAVEIEKGFIL 328
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPCALIGMNS MS+YI++V+DRLL I
Sbjct: 329 DALPCALIGMNSEKMSEYIEYVSDRLLKQI 358
>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
Length = 322
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 159/270 (58%), Positives = 201/270 (74%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E+ +PIL RF +FP++Y +WE+YKKAQ S WTAEEVDLS+D+ W+ L ++E+
Sbjct: 3 EEEYDPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQK 62
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIK
Sbjct: 63 FIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIK 122
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
D EK LF AI+ +PC+ +KA+WA+ W + S SFAERL FACVEGIFFSGSFCAIFW
Sbjct: 123 DPSEKKELFEAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFW 182
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL FSNELISRDEGLH +FA L+ LR R +H +V EAVEIE F+
Sbjct: 183 LKKRGLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVREAVEIEKGFIL 242
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPC LIGMNS MS+YI++V+DRLL I
Sbjct: 243 DALPCNLIGMNSEKMSEYIEYVSDRLLKQI 272
>gi|260666020|ref|YP_003212974.1| hypothetical protein H665_p151 [Ostreococcus tauri virus 1]
gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
Length = 389
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/270 (58%), Positives = 201/270 (74%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+E+ EPIL RF +FP++Y +WE+YKKAQ S WTAEEVDLS+D+ W+ L ++E+
Sbjct: 70 EEEYEPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQK 129
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI ++LAFFA SDGIV EN+ F +++QI EAR+FY +Q E +H E YS L++ YIK
Sbjct: 130 FIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIK 189
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFW 200
D EK LF AI+ +PC+ +KA+WA+ W + S SFAERL FACVEGIFFSGSFCAIFW
Sbjct: 190 DPSEKKELFEAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFW 249
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGL FSNELISRDEGLH +FA L+ LR R +H +V EAV+IE F+
Sbjct: 250 LKKRGLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVREAVDIEKGFIL 309
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ALPC LIGMNS MS+YI++V+DRLL I
Sbjct: 310 DALPCNLIGMNSEKMSEYIEYVSDRLLKQI 339
>gi|422933569|ref|YP_007003693.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 1]
gi|386685975|gb|AFJ20328.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 1]
Length = 340
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/265 (60%), Positives = 201/265 (75%), Gaps = 2/265 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L +++ + I Y +W MYKKA ASFWT EEVDL +DVQ W L +E+HF+
Sbjct: 20 EEPLLTPSLEKYTLNRIDYPDIWGMYKKALASFWTVEEVDLGKDVQGWNALTHNERHFLK 79
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++Q+ EARAFYGFQIA+EN+HSEMY+ LL TY+ D+
Sbjct: 80 HVLAFFAASDGIVNENLLERFSTEVQVFEARAFYGFQIAIENVHSEMYAKLLTTYVADAG 139
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E +LF AIE +PC+ +KA WAL WI + SF ERL FA VEGIFFSGSF AIFWLK+
Sbjct: 140 ECKKLFRAIETMPCIKKKADWALSWISDKNASFGERLTAFAAVEGIFFSGSFAAIFWLKQ 199
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RG+MPGL FSN LISRDEGLH DFAC+LY+ LR + +V +V EAV+IE +F+ +A
Sbjct: 200 RGVMPGLCFSNVLISRDEGLHRDFACMLYAKHLRNKPSESRVKQIVGEAVQIEKEFLTKA 259
Query: 263 LPCALIGMNSSLMSQYIKFVADRLL 287
LP +LIGMN +LMS+YI++VAD LL
Sbjct: 260 LPVSLIGMNITLMSKYIEYVADHLL 284
>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 337
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/270 (58%), Positives = 197/270 (72%), Gaps = 1/270 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ EP+L E RF +FPI+Y +W YK A ASFWTA+E+DLS+D WE+L D E+
Sbjct: 14 KNSDEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEKLTDGERF 73
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VL+FFAASDGIV ENL RF ++Q+PEAR FYGFQI ME +HSEMYS ++E YIK
Sbjct: 74 FISRVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIK 133
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE+ F+AI C+ +KA WAL WI +S F RL+ FA VEGI FSGSF AIFW
Sbjct: 134 DPKEQMVHFDAIHQFECIKKKADWALRWIDDRNSPFPVRLIAFAAVEGIMFSGSFAAIFW 193
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRG+M GLT SNELISRDEGLH DFACLLY ++ + ++V+ ++ EAV +E +++
Sbjct: 194 LKKRGVMKGLTHSNELISRDEGLHRDFACLLYKYIKHKPSQEQVYEIIKEAVSLEQEYLT 253
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EALP LIGMN LMSQYI++VAD LL +
Sbjct: 254 EALPVDLIGMNCRLMSQYIEYVADHLLTEL 283
>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 387
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 150/264 (56%), Positives = 199/264 (75%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E+ EP+L+ RF +FPI ++ +W +YKKAQ S WTAEE+D S+D+ W L D+EKHF
Sbjct: 70 EESEPMLLPTLSRFTVFPIEHENLWTLYKKAQMSNWTAEEIDFSKDMDDWNELSDNEKHF 129
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I ++LAFFA SDGIV EN+ F ++IQ+ EAR+FY +Q E +H E YS L++ YIK+
Sbjct: 130 IKYILAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQSHNEMVHGETYSKLIDKYIKN 189
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
S EK +LF AI+ IPC+ +KAKWA+ W FAERL+ FACVEGIFFSGSFCAIFWLK
Sbjct: 190 SSEKKQLFEAIQTIPCIERKAKWAMKWFDKKRPFAERLLAFACVEGIFFSGSFCAIFWLK 249
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGL+PGL FSNELISRDEG+H +FA L+++L+ + + ++ +AV IE +F+ +A
Sbjct: 250 KRGLLPGLCFSNELISRDEGMHQEFAVELFNMLKNKPSQNTIEEIIRDAVSIEKEFITDA 309
Query: 263 LPCALIGMNSSLMSQYIKFVADRL 286
LPC+LIGMNS MS+YI++VADRL
Sbjct: 310 LPCSLIGMNSGKMSEYIEYVADRL 333
>gi|401881690|gb|EJT45980.1| ribonucleotide reductase small subunit [Trichosporon asahii var.
asahii CBS 2479]
gi|406697724|gb|EKD00978.1| ribonucleotide reductase small subunit [Trichosporon asahii var.
asahii CBS 8904]
Length = 455
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/264 (59%), Positives = 204/264 (77%), Gaps = 5/264 (1%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
IL E + RF +FPI+Y+ +W YK+AQASFWTAEE+DL++D+ W ER+ + E+ FI +
Sbjct: 129 ILRETSDRFVLFPIKYRDIWLAYKQAQASFWTAEELDLAKDLYDWNERMNERERFFILRI 188
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFA+SDGIV ENL ++F ++QI EARAFY FQ +E +H+E YSLL+ETY++D EK
Sbjct: 189 LAFFASSDGIVGENLISQFATEVQIAEARAFYAFQTMIEQVHAETYSLLIETYVQDKDEK 248
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
LF +ENIPC+ +KA WA+ +I F RL+ FACVEGIFFSGSF AIFWLKKRGL
Sbjct: 249 DFLFKGMENIPCIQKKADWAMKYITDDVPFRIRLIAFACVEGIFFSGSFAAIFWLKKRGL 308
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
M GLTFSNELISRDEGLH DFACLLYS L+ + ++VH +V E+++IE +F+ +ALPCA
Sbjct: 309 MGGLTFSNELISRDEGLHTDFACLLYSHLKHKCSQEEVHKIVKESLDIEKEFLTDALPCA 368
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
LIG+N + Y++FVADRL+V +
Sbjct: 369 LIGIN----ADYMEFVADRLVVAL 388
>gi|380863082|gb|AFF18834.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
Length = 180
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/188 (87%), Positives = 172/188 (91%), Gaps = 8/188 (4%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSL ENE N+ E+G +E EPILMEQNQRFCMFPIRYKQ+WEMYKKAQASFWTA
Sbjct: 1 MGSL----ENERNKLEEGVEE----EPILMEQNQRFCMFPIRYKQLWEMYKKAQASFWTA 52
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLSQDVQ WERL DSEKHFI+HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF
Sbjct: 53 EEVDLSQDVQQWERLSDSEKHFITHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 112
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE+IPCVA KAKWAL+WIHSS SFAERL
Sbjct: 113 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESIPCVASKAKWALEWIHSSTSFAERL 172
Query: 181 VGFACVEG 188
V FACVEG
Sbjct: 173 VAFACVEG 180
>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
Length = 323
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/263 (62%), Positives = 201/263 (76%), Gaps = 1/263 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L+E RF ++PI + +W YKKA ASFWT EEVD+ +D+ WERL EK FIS
Sbjct: 4 EPLLVESGIRFVIYPIEHHDIWSFYKKALASFWTTEEVDVGKDMADWERLSADEKKFIST 63
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV+ENL +RF N+++I EAR FYGFQIA+ENIHSE Y+ L+ETYIKD +E
Sbjct: 64 VLAFFAASDGIVVENLCSRFANEVKIVEARFFYGFQIAVENIHSETYAKLIETYIKDERE 123
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LF+AI+N + +KA WAL WI S FA RLV FA VEGIFFSGSF +IFWLKKR
Sbjct: 124 RLVLFDAIKNFEFIKKKADWALRWISDMTSPFAHRLVAFAAVEGIFFSGSFASIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GL+PGLT SNELISRDEGLH DFACLL++ + + + V +V EAV IE +F+ +ALP
Sbjct: 184 GLLPGLTHSNELISRDEGLHRDFACLLFTKIVDKPSREIVCEIVDEAVTIELEFLDQALP 243
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
+IGMN +LMSQYIK+VAD LL
Sbjct: 244 VNVIGMNYTLMSQYIKYVADHLL 266
>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
Length = 387
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/271 (58%), Positives = 200/271 (73%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-S 78
+E E EP+L E R +FPI+Y ++W YKK+ ASFWTAEE+DLS+D WE ++
Sbjct: 58 KESEMNEPLLREDPSRRTVFPIKYPEIWTFYKKSVASFWTAEEIDLSKDFDDWENKMNKD 117
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++++PEA++ Y FQI MENIHSE YSLL+ET
Sbjct: 118 ERFFISRVLAFFAASDGIVNENLVENFCTEVKLPEAKSVYKFQIMMENIHSETYSLLIET 177
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
Y KD KE LFNAI+NI + +KA WA+ WI ++ FAERLV FA +EGIFFSGSF +
Sbjct: 178 YFKDPKEADFLFNAIDNIKYIGEKADWAIRWIQDEEALFAERLVAFAAIEGIFFSGSFAS 237
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELI RDEG+H D+ACLL+S L + + ++ EAV IE +
Sbjct: 238 IFWLKKRGLMPGLTFSNELICRDEGIHTDYACLLFSYLENKPDPSIIEKIITEAVSIEKK 297
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP +L+GMN LM QY+++ ADRLLV
Sbjct: 298 YFSDALPVSLLGMNCDLMCQYVEYCADRLLV 328
>gi|356506867|ref|XP_003522196.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 258
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/236 (65%), Positives = 187/236 (79%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI++ Q+WEMYKK +A+FW EEVDLSQD+ HW L D E+ FI+
Sbjct: 16 EEPLLAPNPDRFCMFPIQFLQIWEMYKKVKAAFWIMEEVDLSQDLCHWATLSDGERPFIT 75
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFF ASDGIVLENLA RF +IQ+PEARAFYGFQI ++NIHSEMY+LLLETYIK S
Sbjct: 76 HVLAFFTASDGIVLENLAGRFTKEIQLPEARAFYGFQITIKNIHSEMYNLLLETYIKYST 135
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ +RLF AI IPC+ +KA+WAL WI +S+SF E L+ FACV+ GSFC FWLKKR
Sbjct: 136 KNNRLFRAINTIPCIIKKAQWALRWIDASESFVECLMAFACVKEXILLGSFCVTFWLKKR 195
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
GLM GLTFSN+LI RD GLHCDF CLLYSLL+K+L ++V ++H+ VEIE +FVC
Sbjct: 196 GLMSGLTFSNKLILRDWGLHCDFMCLLYSLLQKKLSEERVREIMHDVVEIERKFVC 251
>gi|217071966|gb|ACJ84343.1| unknown [Medicago truncatula]
Length = 206
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/204 (77%), Positives = 179/204 (87%), Gaps = 7/204 (3%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSL+N T ++ +E+E +EPILM+Q QRFCMFP+RYKQ+WEMYKKA+ASFWTA
Sbjct: 1 MGSLENGTPKKI-------REEETEEPILMKQTQRFCMFPVRYKQLWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQHW L DSEKHFISHVLAFFA SDGIVLENLAARFLND+QIPEARAFYGF
Sbjct: 54 EEVDLSYDVQHWATLSDSEKHFISHVLAFFATSDGIVLENLAARFLNDVQIPEARAFYGF 113
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIA+ENIHSEMYSLLLETYIKDS+EKH+LFNAIEN+PCVA+KA+WAL WI+SS SFAERL
Sbjct: 114 QIAIENIHSEMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWINSSTSFAERL 173
Query: 181 VGFACVEGIFFSGSFCAIFWLKKR 204
VGFACVEGIFFS + F LK+R
Sbjct: 174 VGFACVEGIFFSEASVPYFGLKER 197
>gi|341884021|gb|EGT39956.1| CBN-RNR-2 protein [Caenorhabditis brenneri]
Length = 761
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 202/273 (73%), Gaps = 1/273 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+P+L++ + RF ++PI+++ +W YK A ASFWT EE+DL +D+ W +L EK FIS
Sbjct: 441 DKPLLVDSDNRFVIYPIKHRDIWNYYKMAVASFWTTEEIDLGKDMDDWNKLSADEKTFIS 500
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
VLAFFAASDGIV+ENL RF ++++ EAR FYGFQIA+ENIHSE Y+ L+ETYIKD
Sbjct: 501 TVLAFFAASDGIVVENLCERFSTEVKLTEARFFYGFQIAVENIHSETYAKLIETYIKDES 560
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+ LF+AI + +KA WAL WI +++ FAERLV FA VEGIFFSGSF +IFWLKK
Sbjct: 561 ERRVLFDAINGFEFIKKKADWALRWISDTETNFAERLVAFAAVEGIFFSGSFASIFWLKK 620
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLT SNELI+RDEGLH DFACLL+S + + ++V ++ EAV IE F+ EAL
Sbjct: 621 RGLMPGLTHSNELIARDEGLHRDFACLLFSKIVNKPSQKRVFDIIDEAVSIELDFLTEAL 680
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
P +IGMN LM +YI++VAD LLV + L+
Sbjct: 681 PVNVIGMNRYLMKKYIRYVADHLLVELGFSKLY 713
>gi|448925009|gb|AGE48590.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus AN69C]
gi|448930394|gb|AGE53959.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus IL-3A]
gi|448933837|gb|AGE57392.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NE-JV-4]
Length = 333
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 197/269 (73%), Gaps = 2/269 (0%)
Query: 24 DQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+H
Sbjct: 12 NQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERH 71
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I
Sbjct: 72 FIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALIS 131
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D +E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL
Sbjct: 132 DEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWL 191
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ +G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+
Sbjct: 192 RNKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICD 251
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC LIGMN+ LM QYI+FVADR+ V +
Sbjct: 252 AIPCRLIGMNADLMGQYIEFVADRIFVAL 280
>gi|444318509|ref|XP_004179912.1| hypothetical protein TBLA_0C05960 [Tetrapisispora blattae CBS 6284]
gi|387512953|emb|CCH60393.1| hypothetical protein TBLA_0C05960 [Tetrapisispora blattae CBS 6284]
Length = 393
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/280 (57%), Positives = 206/280 (73%), Gaps = 10/280 (3%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E EP+L + +R +FPI Y ++E YK+A+ASFWTAE + RL +E
Sbjct: 73 KELEKDEPLLNKDKKRKILFPIEYPDIYEAYKRAEASFWTAEGNN---------RLNANE 123
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+ FIS VLAFFAASDGIV ENL F ++Q+PEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 124 RFFISRVLAFFAASDGIVNENLNENFSVEVQVPEARLFYGFQIMIENIHSETYSLLIDTY 183
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
IKD KE LF+AI+ IP + +KA+WA+ WI+ SD+ +AERLV FA +EGIFFSGSF +I
Sbjct: 184 IKDPKESQFLFDAIQTIPQIKEKAEWAIRWINDSDALYAERLVAFASIEGIFFSGSFASI 243
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELI RDEGLH DFACLL++ + + + +V EAVEIE ++
Sbjct: 244 FWLKKRGLMPGLTFSNELICRDEGLHTDFACLLFTHIENKPSHDIIEKIVTEAVEIEKRY 303
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
+ALP AL+GMN+ LM+QY++FVADRLLV ++ +
Sbjct: 304 FIDALPVALLGMNADLMNQYVEFVADRLLVAFGNPKVYNV 343
>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
Length = 324
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 154/268 (57%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHF 82
QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
+G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+A
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
+PC LIGMNS LM QYI+FVADR+ + +
Sbjct: 244 IPCRLIGMNSELMGQYIEFVADRIFIAL 271
>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 387
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 199/260 (76%)
Query: 27 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHV 86
P+L+ RF +FPI+++ +W +YKKAQ S WTAEE+D S+D+ W L D+EKHFI ++
Sbjct: 74 PMLLPTLSRFTVFPIKHENLWSLYKKAQMSNWTAEEIDFSKDMDDWNGLSDNEKHFIKYI 133
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFA SDGIV EN+ F ++IQ+ EAR+FY +Q E +H E YS L++ YIK S EK
Sbjct: 134 LAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQAHNEMVHGETYSKLIDKYIKSSTEK 193
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
++LF AI+ IPC+ +KAKWA+ W FAERL+ FACVEGIFFSGSFCAI+WLKKRGL
Sbjct: 194 NQLFEAIQTIPCIERKAKWAMKWFDKKRPFAERLLAFACVEGIFFSGSFCAIYWLKKRGL 253
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
+PGL FSNELISRDEG+H +FA L+++L+ + + + ++ +AV IE +F+ +ALPC+
Sbjct: 254 LPGLCFSNELISRDEGMHQEFAVELFNMLKNKPSGEIIEEIIRDAVTIEKEFITDALPCS 313
Query: 267 LIGMNSSLMSQYIKFVADRL 286
LIGMNSS MS+YI++VADRL
Sbjct: 314 LIGMNSSKMSEYIEYVADRL 333
>gi|9632043|ref|NP_048832.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|1620147|gb|AAC96843.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 324
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 197/269 (73%), Gaps = 2/269 (0%)
Query: 24 DQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+H
Sbjct: 3 NQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERH 62
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I
Sbjct: 63 FIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALIS 122
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D +E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL
Sbjct: 123 DEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWL 182
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ +G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+
Sbjct: 183 RNKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICD 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC LIGMN+ LM QYI+FVADR+ V +
Sbjct: 243 AIPCRLIGMNAELMGQYIEFVADRIFVAL 271
>gi|448931089|gb|AGE54652.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus KS1B]
Length = 324
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 197/269 (73%), Gaps = 2/269 (0%)
Query: 24 DQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+H
Sbjct: 3 NQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERH 62
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I
Sbjct: 63 FIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALIS 122
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D +E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL
Sbjct: 123 DEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWL 182
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ +G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+
Sbjct: 183 RNKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICD 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC LIGMN+ LM QYI+FVADR+ + +
Sbjct: 243 AIPCRLIGMNADLMGQYIEFVADRIFIAL 271
>gi|282174133|ref|YP_003358235.1| ribonucleotide reductase subunit 2 [Anguillid herpesvirus 1]
gi|281308976|gb|ADA57859.1| ribonucleotide reductase subunit 2 [Anguillid herpesvirus 1]
Length = 328
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 162/273 (59%), Positives = 201/273 (73%), Gaps = 3/273 (1%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSE 79
E + EP+L N R FPIR +W MYK AQA+ W+AEEVDL+QDV HWE RL E
Sbjct: 2 EVQTYEPLLDPANNRDVTFPIREHAIWAMYKTAQAANWSAEEVDLAQDVTHWEKRLNKDE 61
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFISHVLAFFAA+DG+V NL RF ++Q EA FY FQ+A+EN+H+EMYS L+ T
Sbjct: 62 RHFISHVLAFFAAADGLVNANLGQRFTQEVQYLEATYFYNFQMAIENVHAEMYSKLIATL 121
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAI 198
IKD KE+ RLFNA+E +PC+A+KA+WA W H ++ SF ERLV FA VEGIFFSG+F AI
Sbjct: 122 IKDVKEQDRLFNAVERMPCIAKKAEWAKRWTHDTNASFGERLVAFAAVEGIFFSGAFAAI 181
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQ 257
FWLK RG+MPGL SNE ISRDEGLHCDFACLL+ + + +++V +V EAVEIE +
Sbjct: 182 FWLKPRGIMPGLIMSNEFISRDEGLHCDFACLLFKDHILGKPGYERVSQIVTEAVEIEKE 241
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ EALP L+G+N M YI+FVADRLL +
Sbjct: 242 FLSEALPVRLLGINCEQMCSYIEFVADRLLAAL 274
>gi|448928017|gb|AGE51589.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CviKI]
gi|448929037|gb|AGE52606.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CvsA1]
Length = 324
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 198/269 (73%), Gaps = 2/269 (0%)
Query: 24 DQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+H
Sbjct: 3 NQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERH 62
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I
Sbjct: 63 FIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALIS 122
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D +E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL
Sbjct: 123 DEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWL 182
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ +G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+
Sbjct: 183 RNKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICD 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC LIGMN++LM +YI+FVADR+ V +
Sbjct: 243 AIPCRLIGMNATLMKEYIEFVADRIFVTL 271
>gi|346644878|ref|NP_001231111.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Bos
taurus]
gi|296482362|tpg|DAA24477.1| TPA: ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
Length = 341
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/240 (65%), Positives = 190/240 (79%), Gaps = 1/240 (0%)
Query: 60 AEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG 119
+E VDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYG
Sbjct: 56 SEPVDLSKDIQHWEALKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYG 115
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAE 178
FQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL WI + ++ E
Sbjct: 116 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGE 175
Query: 179 RLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
R+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 176 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHK 235
Query: 239 LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
Q+V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 236 PSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 295
>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
Length = 338
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/240 (65%), Positives = 190/240 (79%), Gaps = 1/240 (0%)
Query: 60 AEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG 119
+E VDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYG
Sbjct: 53 SEPVDLSKDIQHWEALKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYG 112
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAE 178
FQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL WI + ++ E
Sbjct: 113 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGE 172
Query: 179 RLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
R+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 173 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHK 232
Query: 239 LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
Q+V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 233 PSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 292
>gi|448931455|gb|AGE55017.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1D]
gi|448934897|gb|AGE58449.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NY-2B]
gi|448935281|gb|AGE58832.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NYs1]
Length = 324
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/268 (57%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHF 82
QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
+G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+A
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
+PC LIGMN+ LM QYI+FVADR+ V +
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVAL 271
>gi|448931839|gb|AGE55400.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1E]
Length = 324
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 198/269 (73%), Gaps = 2/269 (0%)
Query: 24 DQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W E+L D E+H
Sbjct: 3 NQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERH 62
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I
Sbjct: 63 FIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALIS 122
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D +E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL
Sbjct: 123 DEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWL 182
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ +G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+
Sbjct: 183 RNKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICD 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC LIGMN++LM +YI+FVADR+ + +
Sbjct: 243 AIPCRLIGMNATLMKEYIEFVADRIFIAL 271
>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 99B1]
Length = 325
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 200/267 (74%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EPIL+E RF +FPI ++ ++E YKKA+AS W E+D+S D W +L ++E+HFI
Sbjct: 2 SEPILIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIK 61
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++LAFFA +DG+V ENL F ++IQ PEAR FYG Q+ +EN+H+E YS++L++ ++D
Sbjct: 62 YILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKD 121
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ LF AI I + KA WAL W+++ SFAERL+ FA VEGIFFSG+FCAIFWLKKR
Sbjct: 122 EQRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
+MPGLTFSNELISRDEGLH DFAC+LY + + +L ++ V ++ AVE+E F+CEAL
Sbjct: 182 AIMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEAL 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIG+N+ MS YIKFVADRLL+ +
Sbjct: 242 PVSLIGINAESMSTYIKFVADRLLISL 268
>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
Length = 325
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 200/267 (74%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L+E RF +FPI ++ ++E YKKA+AS W E+D+S D W +L ++E+HFI
Sbjct: 2 SEPLLIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIK 61
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++LAFFA +DGIV ENL F ++IQ PEAR FYG Q+ +EN+H+E YS++L++ ++D
Sbjct: 62 YILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKD 121
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ LF AI I + KA WAL W+++ SFAERL+ FA VEGIFFSG+FCAIFWLKKR
Sbjct: 122 EQRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
+MPGLTFSNELISRDEGLH DFAC+LY + + +L ++ V ++ AVE+E F+CEAL
Sbjct: 182 AIMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEAL 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIG+N+ MS YIKFVADRLL+ +
Sbjct: 242 PVSLIGINAESMSTYIKFVADRLLISL 268
>gi|347481850|gb|AEO97836.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 84]
gi|347600475|gb|AEP14962.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 88]
Length = 325
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 200/267 (74%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
EP+L+E RF +FPI ++ ++E YKKA+AS W E+D+S D W +L ++E+HFI
Sbjct: 2 SEPLLIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIK 61
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++LAFFA +DG+V ENL F ++IQ PEAR FYG Q+ +EN+H+E YS++L++ ++D
Sbjct: 62 YILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKD 121
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ LF AI I + KA WAL W+++ SFAERL+ FA VEGIFFSG+FCAIFWLKKR
Sbjct: 122 EQRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKR 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
+MPGLTFSNELISRDEGLH DFAC+LY + + +L ++ V ++ AVE+E F+CEAL
Sbjct: 182 AIMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEAL 241
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P +LIG+N+ MS YIKFVADRLL+ +
Sbjct: 242 PVSLIGINAESMSTYIKFVADRLLISL 268
>gi|131840053|ref|YP_001096062.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706628|gb|ABG42854.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 3]
gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
Length = 335
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 157/277 (56%), Positives = 206/277 (74%), Gaps = 2/277 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L N RF + I ++ +W MYKKAQ S WTAEE+DL++D WE L ++EK F+ +
Sbjct: 14 EPLLAPSNSRFTLDVIEHQDIWSMYKKAQFSNWTAEEIDLAKDTAGWESLSENEKFFLKN 73
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF+ ++Q EAR FYGFQIA+EN+HSE+Y+ LL TYI D E
Sbjct: 74 ILAFFAASDGIVNENLATRFMKEVQYFEARCFYGFQIAIENVHSEVYAKLLNTYILDPVE 133
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
++ LF A+E +PC+ +KA WAL+WI S D +F ERLV F VEGIFFSG+F +IFWLK++
Sbjct: 134 RNGLFKAMETMPCIKKKADWALNWIESPDATFGERLVAFTAVEGIFFSGAFASIFWLKQK 193
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
MPGLTFSNELISRDEGLH DFACLL+S LR + ++V ++ EAVEIE +F+ ++L
Sbjct: 194 VSMPGLTFSNELISRDEGLHRDFACLLFSSHLRHKPSKERVRAIITEAVEIEKEFLTQSL 253
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIAC 300
P +L+GMN LM +YI++VAD LL + L+ C
Sbjct: 254 PVSLVGMNHDLMCKYIQYVADHLLCQMGLSRLYNTPC 290
>gi|448930767|gb|AGE54331.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus IL-5-2s1]
Length = 324
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHF 82
QEPIL + R F FPI+Y +W+MYKKA A+FWT EEV L+ DV W ++L D E+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWRDKLNDDERHF 63
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I H+L FFA SDGIV+ENL F ++ +PEAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISN 123
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+E++ LF+AIENIP V KAKWA W+ SFAERLV + CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
+G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ V ++ EAVE E +F+C+A
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
+PC LIGMN+ LM QYI+FVADR+ V +
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVAL 271
>gi|347482302|gb|AEO98243.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 203]
gi|347601085|gb|AEP15571.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 207]
gi|347601558|gb|AEP16043.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 208]
gi|357972640|gb|AET97913.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 201]
Length = 325
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 200/266 (75%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+++E RF +FPI ++ ++E YKKA+AS W E+D+S D W +L ++E+HFI +
Sbjct: 3 EPLIIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFA +DGIV ENL F ++IQ PEAR FYG Q+ +EN+H+E YS++L++ ++D E
Sbjct: 63 ILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
+ LF AI I + KA WAL W+++ SFAERL+ FA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
+MPGLTFSNELISRDEGLH DFAC+LY + + +L ++ V ++ AVE+E F+CEALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITHAVELERLFICEALP 242
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
+LIG+N+ MS YIKFVADRLL+ +
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISL 268
>gi|363582863|ref|ZP_09315673.1| ribonucleoside-diphosphate reductase small chain [Flavobacteriaceae
bacterium HQM9]
Length = 326
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/264 (57%), Positives = 203/264 (76%), Gaps = 3/264 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +W+ YKK +A FWTAEE+DL QD+ W+ +L D E++FI
Sbjct: 6 EPILKENPNRFVIFPIQHHDLWDWYKKMEACFWTAEEIDLHQDMTDWQTKLSDDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV N+ F+N++Q PEA Y FQ+ +ENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNHNIGENFVNEVQYPEAMFVYTFQMMIENIHSETYSLLIDTYVKDEV 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF A+E P + +KA WAL+W +SDSFAERL+ FA VEG+FFSG+FC+IFWLKKR
Sbjct: 126 EKDKLFRALEEFPAIKKKADWALNWA-TSDSFAERLIAFAAVEGVFFSGAFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+H +FA L++ L ++ +++ ++ A+E+E F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHTEFAVHLHNNHLINKVPEKRIKEIILGALEVEKIFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P +LIGMN+ LM+QY++FV DRLL
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLL 268
>gi|345779193|ref|XP_003431837.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Canis
lupus familiaris]
Length = 299
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/247 (62%), Positives = 190/247 (76%), Gaps = 1/247 (0%)
Query: 51 KKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ 110
++ +A+ +EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q
Sbjct: 5 ERPEAARPEPDEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 111 IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI 170
+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 171 HSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 229
S F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 EDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 230 LLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVH 289
L++ L + ++V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV
Sbjct: 185 LMFQYLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVE 244
Query: 290 IHQCSLF 296
+ +F
Sbjct: 245 LGFSKVF 251
>gi|422933799|ref|YP_007003842.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 2]
gi|386686112|gb|AFJ20464.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 2]
Length = 337
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/274 (58%), Positives = 206/274 (75%), Gaps = 4/274 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + + + + +K +WEMYKKAQ S WTAEE+DL++D+ W L E+HF+ +
Sbjct: 16 EPLLHDTSVSKYILQVTHKDIWEMYKKAQNSNWTAEEIDLAKDMDGWYALSKDEQHFLKY 75
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q EA+ FYGFQ+A+EN+HSE+Y+ LL TYI D E
Sbjct: 76 VLAFFAASDGIVNENLCERFTREVQYVEAKCFYGFQMAIENVHSEVYAKLLMTYITDVAE 135
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ RLF AIE+IP + +KA+WA+ WI+S S +F ERLV FA VEGIFFSGSF AIFWLK++
Sbjct: 136 RDRLFGAIEHIPSIKRKARWAMKWINSQSATFGERLVAFAAVEGIFFSGSFAAIFWLKQK 195
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS--LLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
G MPGL FSNELISRDEGLH DFACLLY+ LL K + V+ ++ EAVEIE +F+ E+
Sbjct: 196 GTMPGLYFSNELISRDEGLHRDFACLLYTGHLLHKPSQ-ETVYSIIKEAVEIEKEFLTES 254
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LP +L+GMN+ LMSQYI++VAD LL + L+
Sbjct: 255 LPVSLLGMNNRLMSQYIEYVADHLLCQLGLARLY 288
>gi|338728582|ref|XP_003365702.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Equus caballus]
Length = 299
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 156/247 (63%), Positives = 190/247 (76%), Gaps = 1/247 (0%)
Query: 51 KKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ 110
++ +A+ +EVDLS+D+ HW +L EK+FISHVLAFFAASDGIV ENL RF ++Q
Sbjct: 5 ERPEAARPEQDEVDLSKDLPHWNKLTSDEKYFISHVLAFFAASDGIVNENLVERFSQEVQ 64
Query: 111 IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI 170
+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALQWI 124
Query: 171 HSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 229
S F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 230 LLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVH 289
L++ L + ++V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV
Sbjct: 185 LMFQYLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMNCVLMKQYIEFVADRLLVE 244
Query: 290 IHQCSLF 296
+ +F
Sbjct: 245 LGFSKVF 251
>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712, partial [Chlorella
variabilis]
Length = 214
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EPIL N+RFC+ P++Y + +E YK+AQAS+WTAEEVDLSQD++ W +L D E+HF+S
Sbjct: 1 KEPILQANNERFCLLPVKYDRCFEYYKQAQASYWTAEEVDLSQDMRDWRKLTDDERHFVS 60
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
+VLAFFAASDGIVLENL+ RF+ ++QIPEARAFY FQ A+E +HSEMY LLLE YI+D
Sbjct: 61 YVLAFFAASDGIVLENLSTRFMQEVQIPEARAFYAFQSAIEAVHSEMYGLLLEQYIRDPD 120
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ LF+A++ IPCV +KA+WA+ WI SS FAERLV +ACVEGI FSGSFC+IFWLKKR
Sbjct: 121 ERDLLFHAVDTIPCVQKKAQWAMKWIESSSCFAERLVAYACVEGIHFSGSFCSIFWLKKR 180
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
LMPGLTFSNE+ISRDEGLH DFAC LY LL+ R
Sbjct: 181 QLMPGLTFSNEMISRDEGLHTDFACHLYELLQNR 214
>gi|402495788|ref|ZP_10842508.1| ribonucleoside-diphosphate reductase small chain [Aquimarina
agarilytica ZC1]
Length = 326
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/264 (57%), Positives = 202/264 (76%), Gaps = 3/264 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI + +WE YKK +A FWTAEE+DL QD+ W+ +L + E++FI
Sbjct: 6 EPILKENPNRFVIFPIEHHDLWEWYKKMEACFWTAEEIDLHQDLSDWKTKLSEDERYFIK 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV N+ F+N++Q PEA Y FQ+ +ENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNHNIGENFVNEVQYPEAMFVYTFQMMIENIHSETYSLLIDTYVKDEV 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF A+E P + +KA WAL+W +SDSFAERL+ FA VEG+FFSG+FC+IFWLKKR
Sbjct: 126 EKDKLFRALEEFPAIKKKADWALNWA-ASDSFAERLIAFAAVEGVFFSGAFCSIFWLKKR 184
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
GLMPGLTFSNELISRDEG+H +FA L++ L ++ +++ ++ A+E+E F+ E+L
Sbjct: 185 GLMPGLTFSNELISRDEGMHTEFAVHLHNKHLVNKVPEKRIKEIILGALEVEKIFITESL 244
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
P +LIGMN+ LM+QY++FV DRLL
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLL 268
>gi|335286238|ref|XP_003355054.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Sus scrofa]
Length = 299
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/247 (62%), Positives = 188/247 (76%), Gaps = 1/247 (0%)
Query: 51 KKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ 110
++ +A+ EEVDLS+D+ HW RL EK+FISH+LAFFAASDGIV ENL RF ++Q
Sbjct: 5 ERPEAAGSEQEEVDLSKDLPHWNRLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 111 IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI 170
+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKQREFLFNAIETMPYVKKKADWALRWI 124
Query: 171 HSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 229
+F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKATFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 230 LLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVH 289
L++ L + +V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLL
Sbjct: 185 LMFQYLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLTE 244
Query: 290 IHQCSLF 296
+ +F
Sbjct: 245 LGFSKVF 251
>gi|402878879|ref|XP_003903091.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 3 [Papio anubis]
Length = 299
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/246 (62%), Positives = 190/246 (77%), Gaps = 1/246 (0%)
Query: 52 KAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQI 111
+ +A+ +EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+
Sbjct: 6 RPEAAGLDLDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQV 65
Query: 112 PEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIH 171
PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI
Sbjct: 66 PEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIA 125
Query: 172 SSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 230
S F ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL
Sbjct: 126 DRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 185
Query: 231 LYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ L + ++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV +
Sbjct: 186 MFQYLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVEL 245
Query: 291 HQCSLF 296
+F
Sbjct: 246 GFSKIF 251
>gi|426360445|ref|XP_004047453.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Gorilla gorilla gorilla]
Length = 382
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/322 (51%), Positives = 221/322 (68%), Gaps = 35/322 (10%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVA---------QKAKWALDW--------- 169
HSEMYSLL++TYI+D K+++ ++ I I +A Q + D+
Sbjct: 134 HSEMYSLLIDTYIRDPKKRY-CWDFIYKILLMAWLCSDQNLFQNSMLRKDYSIVVFIVIY 192
Query: 170 -----------IHSSDSF----AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 214
I ++ ER+V FA VEG+FFSGSF AIFWLKKRGLMPGLTFSN
Sbjct: 193 VYIYICKCLQCISKIETILCLPGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSN 252
Query: 215 ELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSL 274
ELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+ EALP LIGMN L
Sbjct: 253 ELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCIL 312
Query: 275 MSQYIKFVADRLLVHIHQCSLF 296
M QYI+FVADRLLV + +F
Sbjct: 313 MKQYIEFVADRLLVELGFSKVF 334
>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
floridanus]
Length = 343
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/280 (58%), Positives = 205/280 (73%), Gaps = 18/280 (6%)
Query: 12 VNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ-DVQ 70
V + + E+ + EP+L E RF +FPI+Y +W+MYKKA ASFWT EEV L + D +
Sbjct: 48 VQKVQLKEEFNPELEPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEVPLHKLDKK 107
Query: 71 HWERLLDS-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHS 129
WE L+S E++FISHVLAFFAASDGIV ENL RF +++I EAR FYGFQIA+ENIHS
Sbjct: 108 DWEEKLNSDERYFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHS 167
Query: 130 EMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEG 188
EMYSLL+ETYI D KEK LFNAIE +P V +KA WAL+WI H S +F ER+V
Sbjct: 168 EMYSLLIETYISDPKEKDFLFNAIETLPSVGKKANWALNWINHESATFPERVV------- 220
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
AIFWLKKRG+MPGLTFSNELISRDEGLHCDFACL++ + ++ +++V ++
Sbjct: 221 --------AIFWLKKRGVMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSFERVKSII 272
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+AVEIE +F+ +ALP LIGMN +LM YI+FVADRL V
Sbjct: 273 MDAVEIEQEFLTQALPVQLIGMNCTLMCSYIEFVADRLFV 312
>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
sapiens]
gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 3 [Pan troglodytes]
gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
[Homo sapiens]
gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
sapiens]
Length = 299
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/247 (61%), Positives = 191/247 (77%), Gaps = 1/247 (0%)
Query: 51 KKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ 110
++ +A+ +EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q
Sbjct: 5 ERPEAAGLDQDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 111 IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI 170
+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 171 HSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 229
S F ER+V FA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 230 LLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVH 289
L++ L + ++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV
Sbjct: 185 LMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVE 244
Query: 290 IHQCSLF 296
+ +F
Sbjct: 245 LGFSKVF 251
>gi|389613574|dbj|BAM20123.1| ribonucleoside diphosphate reductase small subunit [Papilio xuthus]
Length = 284
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/250 (62%), Positives = 189/250 (75%), Gaps = 9/250 (3%)
Query: 4 LKNETENEVNQREQGEQEQEDQ--------EPILMEQNQRFCMFPIRYKQVWEMYKKAQA 55
L + N V + E+E D+ EP+L E +RF +FPI+Y +W+MYKKA+A
Sbjct: 27 LAPQNGNVVEYKMDVEKEDTDKVAEFNPELEPLLRENPRRFVIFPIQYPDIWQMYKKAEA 86
Query: 56 SFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEAR 115
SFWT EEVDLS+D+ WE L D E+HFI HVLAFFAASDGIV ENL RF ++QI EAR
Sbjct: 87 SFWTVEEVDLSKDLSDWESLKDCERHFIKHVLAFFAASDGIVNENLVERFSQEVQIGEAR 146
Query: 116 AFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SD 174
FYGFQIAMEN+HSEMYSLL++TYI+D KE+ LFNA+E +PCV +KA WAL WI S +
Sbjct: 147 FFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTA 206
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
+F ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH DFACL++
Sbjct: 207 NFGERIVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKY 266
Query: 235 LRKRLHWQKV 244
L ++ ++V
Sbjct: 267 LVQKPSKERV 276
>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide, partial [Homo
sapiens]
Length = 285
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/237 (64%), Positives = 186/237 (78%), Gaps = 1/237 (0%)
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGF
Sbjct: 1 EEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGF 60
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAER 179
QI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER
Sbjct: 61 QILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGER 120
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
+V FA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 121 VVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKP 180
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 181 SEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 237
>gi|403299936|ref|XP_003940727.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Saimiri boliviensis boliviensis]
Length = 299
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/247 (61%), Positives = 190/247 (76%), Gaps = 1/247 (0%)
Query: 51 KKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ 110
++ +A+ +EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q
Sbjct: 5 ERPEAARLDQDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 111 IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI 170
+PEAR FYGFQI +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 171 HSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 229
S F ER+V FA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 230 LLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVH 289
L++ L + ++V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV
Sbjct: 185 LMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVE 244
Query: 290 IHQCSLF 296
+ F
Sbjct: 245 LGFSKFF 251
>gi|389741966|gb|EIM83154.1| ribonucleotide reductase subunit R2 [Stereum hirsutum FP-91666 SS1]
Length = 341
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 199/276 (72%), Gaps = 13/276 (4%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
QE +L RF +FPI Y +W+MY++A ASFWT E+++ D++ W E L +E+HFI
Sbjct: 10 QEIVLTPNPGRFVLFPIVYPDLWDMYQRALASFWTTSEINMVHDIRQWTEALTANERHFI 69
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV+ENL +RF +++Q+ EARAFY Q ME IHSE Y++L++ IKD
Sbjct: 70 SHVLAFFAASDGIVVENLVSRFASEVQLAEARAFYASQAMMETIHSETYAMLIDVLIKDM 129
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ RLFNA+E+IPCV +KA WA+ WI ++ SF RL+ FA VEG+FFSGSF +IFWLK
Sbjct: 130 GERERLFNAMESIPCVKEKATWAVKWIADAEASFPIRLIAFAVVEGVFFSGSFASIFWLK 189
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC-- 260
KRGLMPGLTFSNELISRDEGLH DFAC+L+ ++ + V + EAV IE +FV
Sbjct: 190 KRGLMPGLTFSNELISRDEGLHTDFACMLFGYIQNKPLPAVVVQIFREAVLIEQRFVTGA 249
Query: 261 ---------EALPCALIGMNSSLMSQYIKFVADRLL 287
+ALP LIGMN+ M +YI+F+ADRLL
Sbjct: 250 DGFILVFLLDALPVKLIGMNAENMCKYIEFIADRLL 285
>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
mulatta]
Length = 704
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/276 (57%), Positives = 190/276 (68%), Gaps = 31/276 (11%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 413 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 472
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 473 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 532
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 533 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 592
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDE V +
Sbjct: 593 KRGLMPGLTFSNELISRDE------------------------------VSLNQIIGXXX 622
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
IGMN +LM QYI+FVADRL++ + +F +
Sbjct: 623 XXXXXIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 658
>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
Length = 324
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 193/268 (72%), Gaps = 2/268 (0%)
Query: 25 QEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHF 82
QEPIL + R F FPI+Y +W MYKKA A+FWT EEV L+ DV W E+L + E+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYHDLWNMYKKAVATFWTTEEVPLNADVADWREKLNNDERHF 63
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I H+L FFA SDGIV+ENL F ++ PEAR FY +Q E++HSEMY+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFGVEVMAPEARQFYAYQTFNESVHSEMYALLIDALISD 123
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLK 202
+E+ LF+AIE IP V KAKWA W+ SFAERLV + CVEGI FSGSFCA+FWL+
Sbjct: 124 EQERLDLFDAIETIPAVHNKAKWAQKWLKPERSFAERLVAWICVEGILFSGSFCALFWLR 183
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
+G+MPGL SNE ISRDEGLH F L+YS L+ +L ++ + ++ EAV E +F+C+A
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLSFETIKQIIMEAVTNEKEFICDA 243
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
+PC++IGMN+ LM+QYI+FVADR+ +
Sbjct: 244 IPCSMIGMNADLMNQYIEFVADRIFTAL 271
>gi|448928392|gb|AGE51963.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVM-1]
Length = 326
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
virus MT325]
Length = 326
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|448925356|gb|AGE48936.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus AP110A]
gi|448935661|gb|AGE59211.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus OR0704.2.2]
Length = 326
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|448929397|gb|AGE52965.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CZ-2]
gi|448934571|gb|AGE58124.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NW665.2]
Length = 326
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
Length = 348
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 27 NQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 86
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 87 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 146
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 147 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 206
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 207 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 266
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 267 AIPCRMIGMNSELMGQYLEFVADRIFVAL 295
>gi|448927709|gb|AGE51282.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVG-1]
Length = 326
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NQEPLLADIGNRKYSAFPIKYPDVFGMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|431901752|gb|ELK08629.1| Ribonucleoside-diphosphate reductase subunit M2 B [Pteropus alecto]
Length = 318
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 202/297 (68%), Gaps = 28/297 (9%)
Query: 1 MGSLKNETENEVNQREQ-GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWT 59
MG L+ Q E+ E++EP+L + ++RF +FPI+Y +W+MYK+AQASFWT
Sbjct: 1 MGDLERPEAAWPEQDERLSSDTNENEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWT 60
Query: 60 AEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG 119
AEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYG
Sbjct: 61 AEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYG 120
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAER 179
FQI +EN+HSEMYSLL+ TYI+D K++ LFNAIE +P V +KA WAL WI A+R
Sbjct: 121 FQILIENVHSEMYSLLIHTYIRDPKKRDFLFNAIETMPYVKKKADWALRWI------ADR 174
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
F GLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 175 KSTF---------------------GLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKP 213
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++V ++ AVEIE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 214 SEERVREVIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKIF 270
>gi|448926378|gb|AGE49955.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus Can18-4]
Length = 359
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
+QEP+L + N+++ FPI+Y V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 38 NQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 97
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 98 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 157
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 158 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 217
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 218 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 277
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 278 AIPCRMIGMNSELMGQYLEFVADRIFVAL 306
>gi|448929830|gb|AGE53396.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus GM0701.1]
Length = 325
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/267 (56%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L R + FPIRY +++MYKKA A+FWT EEV L+QDV W E+L D E+HFI
Sbjct: 6 EPLLANIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+L FFA SDG+V+ENL F ++ P AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+++LF AIE IP V +KA WA + SFAERLV + CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGL SNE ISRDEGLH F LLYS L K+L + V +V EAV E F+C+A+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLETVKSIVEEAVANEKDFICDAI 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC +IGMNS LMSQYI+FVADR+ +
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTAL 272
>gi|448936080|gb|AGE59628.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus TN603.4.2]
Length = 325
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/267 (56%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L + R + FPIRY +++MYKKA A+FWT EEV L+QDV W E+L D E+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+L FFA SDG+V+ENL F ++ P AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+++LF AIE IP V +KA WA + SFAERLV + CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGL SNE ISRDEGLH F LLYS L K+L V +V EAV E F+C+A+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC +IGMNS LMSQYI+FVADR+ +
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTAL 272
>gi|448925447|gb|AGE49026.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Br0604L]
Length = 325
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/267 (56%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L + R + FPIRY +++MYKKA A+FWT EEV L+QDV W E+L D E+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+L FFA SDG+V+ENL F ++ P AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+++LF AIE IP V +KA WA + SFAERLV + CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGL SNE ISRDEGLH F LLYS L K+L V +V EAV E F+C+A+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC +IGMNS LMSQYI+FVADR+ +
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTAL 272
>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
Length = 407
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/222 (67%), Positives = 177/222 (79%), Gaps = 1/222 (0%)
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
+VDLS+D+QHWE L D E+ FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQ
Sbjct: 137 QVDLSKDLQHWESLKDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQ 196
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERL 180
IAMENIHSEMYSLL++TYIK+ E+ LFNAIE +PCV +KA WAL+WI + S+ ER+
Sbjct: 197 IAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKKADWALNWIGNQKASYGERV 256
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 257 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPS 316
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFV 282
Q V ++ AVEIE +F+ EALP LIGMN LM +YI+F+
Sbjct: 317 AQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLMKRYIEFI 358
>gi|448929743|gb|AGE53310.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus Fr5L]
Length = 326
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 194/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
++EP+L + N+++ FPI+Y V+ MYKKA +FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NKEPLLADIGNRKYSAFPIKYPDVFAMYKKAVTTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|448927342|gb|AGE50916.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVB-1]
Length = 326
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
++EP+L + N++F FPI++ ++ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NKEPLLADIGNRKFSAFPIKFPDIFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/186 (79%), Positives = 169/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+AIE +PCVA+
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|448927042|gb|AGE50617.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVA-1]
gi|448928726|gb|AGE52296.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVR-1]
Length = 326
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 195/269 (72%), Gaps = 2/269 (0%)
Query: 24 DQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKH 81
++EP+L + N+++ FPI++ V+ MYKKA ++FWT EEV L+QD+ W ++L D E+H
Sbjct: 5 NKEPLLADIGNRKYSAFPIKFPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FI +L FFA SDG+V+EN+A F ++ P AR FY +Q+ E+IHSEMYSLLL+ I+
Sbjct: 65 FIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIE 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWL 201
D E++ LF+AIE IP V +KA WA ++ SFAERLV + CVEG+ FSGSFCAIFWL
Sbjct: 125 DDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
+ RG+MPGL SNE ISRDEGLH F LLYS L +L +V +V EAV E +F+CE
Sbjct: 185 RNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICE 244
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
A+PC +IGMNS LM QY++FVADR+ V +
Sbjct: 245 AIPCRMIGMNSELMGQYLEFVADRIFVAL 273
>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 168/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+AIE +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|448925781|gb|AGE49359.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Can0610SP]
gi|448932290|gb|AGE55849.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus MO0605SPH]
gi|448932944|gb|AGE56501.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NE-JV-2]
gi|448933285|gb|AGE56841.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NE-JV-3]
gi|448933961|gb|AGE57515.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NTS-1]
gi|448935746|gb|AGE59295.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus OR0704.3]
gi|448936417|gb|AGE59964.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus WI0606]
Length = 325
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/267 (56%), Positives = 187/267 (70%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L + R + FPIRY +++MYKKA A+FWT EEV L+QDV W E+L D E+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+L FFA SDG+V+ENL F ++ P AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQGYNESVHSEQYSLLLDALIEDE 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+++LF AIE IP V +KA WA + SFAERLV + CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNKLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGL SNE ISRDEGLH F LLYS L +L V +V EAV E F+C+A+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC +IGMNS LMSQYI+FVADR+ +
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTAL 272
>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
Length = 350
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 197/276 (71%), Gaps = 16/276 (5%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ + E +L E RF +FPI++ +W+ YKKA ASFWT +EVDLS+D + WE L D E+H
Sbjct: 42 ESNGEILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERH 101
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEM SLL
Sbjct: 102 FISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSEM-SLL------ 154
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
FNAI V +KA WAL WI + +AERL+ FA VEGIFFSGSF AIFW
Sbjct: 155 --------FNAIYEFEFVKKKADWALCWIADIKAPYAERLIAFAAVEGIFFSGSFAAIFW 206
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLT SNELISRDEGLH DFACLLY+ ++ + ++++ ++ EAV+IE +++
Sbjct: 207 LKKRGLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEERIYQIIREAVDIEKEYLT 266
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIG+N LM QYI++VAD LL +H ++
Sbjct: 267 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKMY 302
>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 169/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 169/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|448926466|gb|AGE50042.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Canal-1]
Length = 325
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L + R + FPIRY +++MYKKA A+FWT EEV L+QDV W E+L D E+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+L FFA SDG+V+ENL F ++ P AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+++LF AIE IP V +KA WA + SFAERLV + CVEG+ FSGSFCAIFWL+
Sbjct: 126 DERNQLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGL SNE ISRDEGLH F LLYS L +L + V +V EAV E F+C+A+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLALETVKSIVEEAVANEKDFICDAI 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC +IGMNS LMS YI+F+ADR+ V +
Sbjct: 246 PCRMIGMNSELMSHYIEFIADRIFVAL 272
>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/186 (77%), Positives = 168/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|448931953|gb|AGE55513.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus MN0810.1]
Length = 325
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
Query: 26 EPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
EP+L + R + FPIRY +++MYKKA A+FWT EEV L+QDV W E+L D E+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
H+L FFA SDG+V+ENL F ++ P AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+++LF AIE IP V +KA WA + SFAERLV + CVEG+ FSGSFCAIFWL+
Sbjct: 126 AERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RG+MPGL SNE ISRDEGLH F LLYS L K+L V +V EAV E F+C+A+
Sbjct: 186 RGIMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PC +IGMNS LMS YI+FVADR+ + +
Sbjct: 246 PCRMIGMNSDLMSAYIEFVADRIFIAL 272
>gi|397638244|gb|EJK72985.1| hypothetical protein THAOC_05425, partial [Thalassiosira oceanica]
Length = 235
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/233 (65%), Positives = 181/233 (77%), Gaps = 2/233 (0%)
Query: 63 VDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
+DL++D++ W+ L ++E+HF+SH+LAFFAASDGIV ENL F ++Q EAR FYGFQI
Sbjct: 1 IDLAEDLKDWDGLTNNERHFVSHILAFFAASDGIVNENLCGNFATEVQSAEARCFYGFQI 60
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLV 181
A+ENIHSE YSLL++TYIKD +K L NAIE +PCV +KA WAL W S SFAER +
Sbjct: 61 AVENIHSETYSLLIDTYIKDQADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCI 120
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
FA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS L ++
Sbjct: 121 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPE 180
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCS 294
++ +V AVEIE +FV +ALP LIGMNS LM QYI+F ADRLL H CS
Sbjct: 181 SRIVEIVTHAVEIEKEFVVDALPVELIGMNSGLMCQYIEFCADRLL-HALGCS 232
>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/186 (77%), Positives = 168/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+AIE +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++ + EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+AIE +PCVA+
Sbjct: 1 AGRLMKEVHVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/198 (73%), Positives = 172/198 (86%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLLVHIHQCSLFIIA 299
VADRLL + ++ +A
Sbjct: 181 VADRLLGALGCGKVYYVA 198
>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLAFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+AIE +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 168/186 (90%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA++NIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIDNIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+AIE +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+S AERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
Length = 213
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 172/213 (80%)
Query: 42 RYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENL 101
++ +WEMYKK +ASFWTAEE+DLS+D WE L SE+HFI HVLAFFAASDGIVLENL
Sbjct: 1 QHADLWEMYKKHEASFWTAEEIDLSKDNVDWESLTSSEQHFIKHVLAFFAASDGIVLENL 60
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A +F +IQ+PEARAFYGFQIAMENIHSE YSLL+E YIK+ +EK + NAIE +P VA+
Sbjct: 61 AGQFACEIQVPEARAFYGFQIAMENIHSETYSLLIEQYIKEPQEKADILNAIETMPAVAE 120
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KAKWA+ W+ +SF ERLV FA VEGI FSGSFCAI+WLKKRGLMPGLTFSNELISRDE
Sbjct: 121 KAKWAVQWMQRENSFTERLVAFAAVEGILFSGSFCAIYWLKKRGLMPGLTFSNELISRDE 180
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
GLH DFACL+Y L+ L VH ++ AVE+
Sbjct: 181 GLHADFACLIYRKLQNHLPEDVVHSIMRGAVEV 213
>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+SFAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 345
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 197/290 (67%), Gaps = 10/290 (3%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF +FPI Y +W MYKK +AS W E V+L D++ W R+ D E+HFIS+
Sbjct: 38 EPLLKDNPRRFVIFPIIYDNIWAMYKKHEASLWNIEAVNLKSDLEDWMRMTDEERHFISY 97
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAF AAS+GIV ENL RF ++Q+ EAR FYGFQI +ENIHSEMYSLL++TYIKD KE
Sbjct: 98 ILAFLAASNGIVSENLVKRFSQEVQVTEARCFYGFQIMIENIHSEMYSLLIDTYIKDPKE 157
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K L NA E +PCV + A W L WI S +F ERLV FA V+GIF SG+ +I WL KR
Sbjct: 158 KETLINATETMPCVKKMADWVLKWITDSKATFGERLVTFAAVKGIFLSGNVPSITWLTKR 217
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLM GLTFSNELI RDEGLH DFACLL+ L ++ + H++ +AV IE F+ AL
Sbjct: 218 GLMLGLTFSNELIFRDEGLHTDFACLLFKHLDQKPPLTVITHIICKAVTIEQYFLTNALL 277
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFPFL 314
++GM+ M++YI+FVADRLL + C + R+ FPF+
Sbjct: 278 VKMVGMSCEKMAEYIEFVADRLLNE--------LGC-PAVYRSSNPFPFM 318
>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+S AERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|392558190|gb|EIW51392.1| putative ribonucleoside-diphosphate reductase small chain B
[Trametes versicolor FP-101664 SS1]
Length = 331
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/265 (55%), Positives = 186/265 (70%), Gaps = 2/265 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFI 83
+ IL RF ++PI+Y ++W+ YK AQASFWTA+E+DLS DV+HW RL D E+ FI
Sbjct: 6 NDAILKPSTSRFILYPIKYPEIWDAYKTAQASFWTADEIDLSADVRHWTCRLTDEERAFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S +LAFFAASDG+V ENL RF ++QIPEAR FYGFQI MENIH+E Y+ +L T I+D+
Sbjct: 66 SILLAFFAASDGMVNENLLERFCAEVQIPEARCFYGFQIMMENIHAETYASMLTTLIQDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
E+ RLF+A IP + KA+W + WI FA RL+ FA VEGIFFS SF AIFWL+
Sbjct: 126 AERDRLFSATSTIPAIKAKAEWTMRWIEDKHQPFAVRLIAFAAVEGIFFSSSFAAIFWLR 185
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGL+PG+ SNELI+RDE +H FACLLYS L+ R V ++ EAV +E F +A
Sbjct: 186 SRGLLPGICHSNELIARDESMHTMFACLLYSQLQTRAPKATVRAVIREAVALEKSFFADA 245
Query: 263 LPCALIGMNSSLMSQYIKFVADRLL 287
LP L GMN+ LM Y++ VAD LL
Sbjct: 246 LPTRLAGMNTELMGDYVEAVADDLL 270
>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 167/186 (89%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+S AERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLL 287
VADRLL
Sbjct: 181 VADRLL 186
>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 171/198 (86%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+S AERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLLVHIHQCSLFIIA 299
VADRLL + ++ +A
Sbjct: 181 VADRLLGALGCGKVYYVA 198
>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 290
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 150/246 (60%), Positives = 187/246 (76%), Gaps = 2/246 (0%)
Query: 54 QASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPE 113
+++FWT EEVD++ D +H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI E
Sbjct: 3 ESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILE 62
Query: 114 ARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS 173
A+ FYGFQIA+ENIHSEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S
Sbjct: 63 AKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASD 122
Query: 174 DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 233
SF R V FACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+
Sbjct: 123 TSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHK 182
Query: 234 LLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQC 293
+ + + +V EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + +
Sbjct: 183 YINNKC--TVIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEK 240
Query: 294 SLFIIA 299
++ ++
Sbjct: 241 KIYNVS 246
>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 171/198 (86%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL WI S+S AERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLLVHIHQCSLFIIA 299
VADRLL + ++ +A
Sbjct: 181 VADRLLGALGCGKVYNVA 198
>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
Length = 326
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 197/274 (71%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
E +L +N R+ +FPI+Y ++W++YKK +A+FWTAEE+D S+D +++L E+ FI
Sbjct: 7 NEELLKSENSRYTVFPIKYHKIWDLYKKMEAAFWTAEEIDWSKDKHDFKKLNQDEQRFIK 66
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
+VLAFF+ASD IV NL R +++Q EA+ Y FQ+ ME IHSE+Y+L ++ I+D +
Sbjct: 67 YVLAFFSASDTIVNINLGERLSHEVQPLEAKIAYTFQMMMEGIHSEVYALQIDNIIEDVQ 126
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
E+ + N+IE +PC+ K W L W+ S +SFA R+V EG+FFSGSFCAIFWLK +
Sbjct: 127 ERKDILNSIETVPCIKAKTDWMLKWVKSEESFATRMVAQVISEGLFFSGSFCAIFWLKNK 186
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
+MPGL SNELI+RDEG+HCD++ +LY +L+ +L +K+ M +AVE E F+CE+LP
Sbjct: 187 NIMPGLISSNELIARDEGMHCDYSIMLYHMLQNKLSQEKIQQMFKDAVETERIFICESLP 246
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
C+L+GMN+ LM QYIKFVAD+L++ + +F +
Sbjct: 247 CSLLGMNADLMEQYIKFVADQLIIKLGYNKIFKV 280
>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/198 (72%), Positives = 171/198 (86%)
Query: 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQ 161
A R + ++Q+ EARAFYGFQIA+ENI SEMYSLLLETYIKDS+EK+RLF+A+E +PCVA+
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 162 KAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
KA+WAL W+ S+S AERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWMDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACLLYSLLRK+L ++V +V +AV+IE +FV +ALPCAL+GMN LMSQYI+F
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 282 VADRLLVHIHQCSLFIIA 299
VADRLL + ++ +A
Sbjct: 181 VADRLLGALGCGKVYNVA 198
>gi|42565480|gb|AAS21007.1| ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis]
Length = 197
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 138/185 (74%), Positives = 160/185 (86%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDLSQD +HWE L E+HFI+
Sbjct: 10 EEPLLAPNPDRFCMFPIKYPEIWEMYKKAEASFWTAEEVDLSQDTRHWEALTADERHFIT 69
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+YIKD
Sbjct: 70 HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDPD 129
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK+RLF+AIE IPCVA+KA+WAL WI SFA+R+V FACVEGIFFSG C+IFWLKKR
Sbjct: 130 EKNRLFHAIETIPCVAKKAEWALRWIDGGKSFAQRVVAFACVEGIFFSGVSCSIFWLKKR 189
Query: 205 GLMPG 209
GLMPG
Sbjct: 190 GLMPG 194
>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
Length = 306
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/221 (62%), Positives = 177/221 (80%), Gaps = 2/221 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290
>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
Length = 306
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/221 (62%), Positives = 177/221 (80%), Gaps = 2/221 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290
>gi|448932723|gb|AGE56281.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NE-JV-1]
Length = 325
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 136/260 (52%), Positives = 185/260 (71%), Gaps = 1/260 (0%)
Query: 32 QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFF 90
++ ++ FPI++ ++ MYKKA ++FWT EEV L QD+ W ++L E++FI HVL FF
Sbjct: 13 KSNKYSAFPIKHPDLFAMYKKAVSTFWTVEEVPLHQDIADWRDKLTGDERYFIKHVLGFF 72
Query: 91 AASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150
A SDGIV+EN+A F ++ P AR FY +Q+ E++HSEMYSLLL+ ++D E++ LF
Sbjct: 73 AGSDGIVMENIANNFSTEVTDPSARLFYAYQMFNESVHSEMYSLLLDALVEDETERNSLF 132
Query: 151 NAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
AIE IP V +KA WA++++ SFAERLV + CVEG+ FSGSFCAIFW + RGLMPGL
Sbjct: 133 EAIETIPAVGKKASWAINYLSPQKSFAERLVAWICVEGLLFSGSFCAIFWFRNRGLMPGL 192
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
SNE ISRDEGLH F L+YS L +L + V +V EAV E +F+ +A+PC +IGM
Sbjct: 193 GLSNEFISRDEGLHQQFGELMYSKLENKLSLETVKSIVEEAVANEKEFIIDAIPCRMIGM 252
Query: 271 NSSLMSQYIKFVADRLLVHI 290
N LMSQYI+F+ADR+ +
Sbjct: 253 NQELMSQYIEFIADRIFAAL 272
>gi|395849989|ref|XP_003797586.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 B-like [Otolemur garnettii]
Length = 615
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/283 (53%), Positives = 197/283 (69%), Gaps = 11/283 (3%)
Query: 18 GEQEQE---DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
G E E ++EP+L + ++ +F I+Y W+ YK+ QASFWTAEEVDLS+D+ HW +
Sbjct: 286 GANENEVKSNEEPLLRKSSRHCVIFAIQYPDTWKTYKQEQASFWTAEEVDLSKDLPHWNK 345
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L EK+++SH+LAFFAASDGI+ EN+ ++Q+PE QI +EN+HSEMYSL
Sbjct: 346 LKSDEKYWVSHILAFFAASDGIINENVVXS--QEVQVPEVX-----QILIENVHSEMYSL 398
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSG 193
L +TYI D K++ LFN IE +PCV +KA W L WI + ER+V FA VE IFFSG
Sbjct: 399 LTDTYIXDPKKRDFLFNVIETMPCVQKKADWTLXWIADIKSTLGERVVAFAAVERIFFSG 458
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SF AIF LKKR LM GLTFSNELISRDEGLHCDFA L++ + ++V ++ EAV+
Sbjct: 459 SFAAIFXLKKRVLMSGLTFSNELISRDEGLHCDFAYLIFXYFVNKPSEERVREIIIEAVK 518
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
IE +F+ EALP L+GMN LM+QY +FVA+RLLV + +F
Sbjct: 519 IEQEFLTEALPVVLVGMNCILMTQYTEFVANRLLVELGFSKVF 561
>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
Length = 224
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI++ +WE YKK +ASFWTAEE+DL QD+ W +L + EK+FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDITDWNTKLNEDEKYFIK 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIV ENLA F+N++Q EA+ FYGFQI MENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK +LF+AIE P + +KA+WAL WI SDSFAERL+ FA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDKLFHAIEVFPAIKRKAEWALKWI-ESDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYS 233
GLMPGLTFSNELISRDEG+HCDFA +++
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHIHN 212
>gi|358054708|dbj|GAA99634.1| hypothetical protein E5Q_06335 [Mixia osmundae IAM 14324]
Length = 549
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/279 (53%), Positives = 189/279 (67%), Gaps = 13/279 (4%)
Query: 12 VNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQH 71
+ + E+ +E E QEP+L E + RF +FPI+Y ++W YK+A ASFWTAEE+DL+ D
Sbjct: 212 LTEAEKRAKELERQEPLLQELDNRFVLFPIKYDEIWRFYKRAVASFWTAEEIDLTGDRAD 271
Query: 72 WERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEM 131
+E L E+HFI HVLAFFAASDGIV ENL RF +++++ EA+ FYGFQI MENIHSE+
Sbjct: 272 FESLTPGERHFILHVLAFFAASDGIVNENLVERFSSEVKVTEAKCFYGFQIMMENIHSEV 331
Query: 132 YSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFF 191
YSLL+E Y++D +E+ L + +D I + F F G FF
Sbjct: 332 YSLLIEFYVRDKRERQALTLGTQ------------VD-IRRPNDFCRATRRFCGCRGHFF 378
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
SGSF AIFWLKKRGLMPGLTFSNELISRDEGLH +FACLL+ L R +V ++ A
Sbjct: 379 SGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTEFACLLFRHLHHRPSDARVQEIITSA 438
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V IE F+ EALP LIGMNS MSQYI++VADRLL +
Sbjct: 439 VTIEKDFLTEALPVKLIGMNSDTMSQYIEYVADRLLTTL 477
>gi|448825572|ref|YP_007418503.1| ribonucleoside-diphosphate reductase small chain [Megavirus lba]
gi|444236757|gb|AGD92527.1| ribonucleoside-diphosphate reductase small chain [Megavirus lba]
Length = 406
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 187/265 (70%), Gaps = 2/265 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L N+R+ ++PI Y QVW+ YK + W EEVDLS+DVQHW +L ++++ FI H
Sbjct: 89 EPVLSSTNERYTVYPIIYNQVWKNYKDQLKNNWVVEEVDLSKDVQHWNKLSENDRIFIMH 148
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFA++DGIV N+ ++ ++I EA YG Q MEN H EMYSL+L+T++KD
Sbjct: 149 VLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDIL 208
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR- 204
K L AI+ +P + +KA W WI S ++A +L FA VEG+FFSGSF +IFWLK R
Sbjct: 209 KKNLIEAIKTMPSIKKKADWCQKWIKSDKTYAHKLAAFAVVEGVFFSGSFASIFWLKTRK 268
Query: 205 -GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
+MPGL SN+ I+RDE H + AC++YSLL+ +L +H ++ EA++IE +F+ +L
Sbjct: 269 GSVMPGLIKSNKFIARDENKHVELACIMYSLLKNKLKESVIHEIIQEAIDIEDEFINCSL 328
Query: 264 PCALIGMNSSLMSQYIKFVADRLLV 288
PC L+GMNSSLMSQYIK+VADRLLV
Sbjct: 329 PCRLLGMNSSLMSQYIKYVADRLLV 353
>gi|363540639|ref|YP_004894645.1| mg594 gene product [Megavirus chiliensis]
gi|350611804|gb|AEQ33248.1| ribonucleoside-diphosphate reductase small chain [Megavirus
chiliensis]
gi|371943945|gb|AEX61773.1| ribonucleoside-diphosphate reductase small chain [Megavirus
courdo7]
gi|425701506|gb|AFX92668.1| ribonucleoside-diphosphate reductase small chain [Megavirus
courdo11]
Length = 406
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 187/265 (70%), Gaps = 2/265 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L N+R+ ++PI Y QVW+ YK + W EEVDLS+DVQHW +L ++++ FI H
Sbjct: 89 EPVLSSTNERYTVYPIIYNQVWKNYKDQLKNNWVVEEVDLSKDVQHWNKLSENDRIFIMH 148
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFA++DGIV N+ ++ ++I EA YG Q MEN H EMYSL+L+T++KD
Sbjct: 149 VLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDIL 208
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR- 204
K L AI+ +P + +KA W WI S ++A +L FA VEG+FFSGSF +IFWLK R
Sbjct: 209 KKNLIEAIKTMPSIKKKADWCQKWIKSDKTYAHKLAAFAVVEGVFFSGSFASIFWLKTRK 268
Query: 205 -GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
+MPGL SN+ I+RDE H + AC++YSLL+ +L +H ++ EA++IE +F+ +L
Sbjct: 269 GSVMPGLIKSNKFIARDENKHVELACIMYSLLKNKLKESVIHEIIQEAIDIEDEFINCSL 328
Query: 264 PCALIGMNSSLMSQYIKFVADRLLV 288
PC L+GMNSSLMSQYIK+VADRLLV
Sbjct: 329 PCRLLGMNSSLMSQYIKYVADRLLV 353
>gi|323337103|gb|EGA78359.1| Rnr2p [Saccharomyces cerevisiae Vin13]
Length = 296
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 171/214 (79%), Gaps = 2/214 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL 231
IFWLKKRG+MPGLTFSNELI RDEGLH DFACL
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLF 283
>gi|429962574|gb|ELA42118.1| ribonucleoside-diphosphate reductase small chain, partial
[Vittaforma corneae ATCC 50505]
Length = 282
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/234 (60%), Positives = 180/234 (76%), Gaps = 2/234 (0%)
Query: 63 VDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
VD+ D++ ++RL E+HFI +VLAFFAASDGIV ENL RF ++I EA+ FYGFQI
Sbjct: 1 VDIHNDLEDFDRLTKDEQHFIKYVLAFFAASDGIVNENLVERFSSEITNLEAKCFYGFQI 60
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182
AMENIHSEMYS L+ETYI+D EK+ LFN+I+ IP +A+KA WA WI S+ F R++
Sbjct: 61 AMENIHSEMYSKLIETYIRDEDEKNFLFNSIKTIPSIARKAAWAKKWIESTTDFDTRMIA 120
Query: 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQ 242
FACVEGIFFSG F AIFW+KKRGLMPGLTFSNELISRDE +H +FACLL+ + +
Sbjct: 121 FACVEGIFFSGCFAAIFWIKKRGLMPGLTFSNELISRDEAVHTEFACLLHKHIVSKC--T 178
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +V EAVEIE QF+ E+LP +LIGMN +LM QYI+FVADRLL ++ + +F
Sbjct: 179 RIRDIVREAVEIEKQFITESLPVSLIGMNCALMCQYIEFVADRLLYNLGEKKIF 232
>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
and kidney necrosis virus]
gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
and kidney necrosis virus]
Length = 312
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/257 (56%), Positives = 188/257 (73%), Gaps = 4/257 (1%)
Query: 46 VWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAAR 104
+W MYKKA ASFWT EEVDLS DV+HW E+L ++E+ F+SH+LAFFA +DGIV +NL
Sbjct: 13 LWAMYKKAVASFWTVEEVDLSTDVRHWTEKLTEAERRFMSHILAFFAMADGIVGDNLVCN 72
Query: 105 FLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKA 163
F ++ IPEARAFYGFQ+AMENIH+EMY+ L+ T + + + LF+A E++PCV KA
Sbjct: 73 FAKELDYIPEARAFYGFQVAMENIHAEMYTQLIITLVA-KENQAALFSAAEDMPCVKAKA 131
Query: 164 KWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 222
+WA W++++ S A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL FSNELISRDEG
Sbjct: 132 QWAAQWLNATHKSIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGLAFSNELISRDEG 191
Query: 223 LHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFV 282
LHCDFAC+L+ + + H ++ +AV+IET F EAL L+GMNS M YI+FV
Sbjct: 192 LHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMNSDSMRLYIQFV 251
Query: 283 ADRLLVHIHQCSLFIIA 299
ADRLL + ++ +A
Sbjct: 252 ADRLLDALGYAKMYNVA 268
>gi|349603084|gb|AEP99024.1| Ribonucleoside-diphosphate reductase subunit M2-like protein,
partial [Equus caballus]
Length = 261
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 167/207 (80%), Gaps = 1/207 (0%)
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKDSK
Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 60
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKK 203
E+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLKK
Sbjct: 61 EREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK 120
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EAL
Sbjct: 121 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEAL 180
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
P LIGMN +LM QYI+FVADRLL+ +
Sbjct: 181 PVRLIGMNCALMKQYIEFVADRLLLEL 207
>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
Length = 244
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/194 (70%), Positives = 161/194 (82%)
Query: 106 LNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKW 165
++D+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYI+D EK RLF AI+ +P V +KA W
Sbjct: 1 MSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADW 60
Query: 166 ALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 225
A+ WI + FAERLV FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC
Sbjct: 61 AMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 120
Query: 226 DFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADR 285
DFACLLY LLR +L +V +V +AV+IE +FVC+ALP AL+GMN LMSQYI+FVADR
Sbjct: 121 DFACLLYDLLRGKLDEARVREIVADAVDIEREFVCDALPVALVGMNGDLMSQYIEFVADR 180
Query: 286 LLVHIHQCSLFIIA 299
LL+ + ++ +A
Sbjct: 181 LLMALGCKKMYNVA 194
>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
iridovirus]
Length = 312
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/269 (53%), Positives = 192/269 (71%), Gaps = 5/269 (1%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAA 92
R+ + P +W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 93 SDGIVLENLAARFLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
+DGIV +NL F ++ IPEARAFYGF++AMENIH+EMY+ L+ T + + + LF+
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFRVAMENIHAEMYTQLIITLVA-KENQAALFS 119
Query: 152 AIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A E++PCV KA+WA W++++ A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
FSNELISRDEGLHCDFAC+L+ + + + H ++ +AV+IET F EAL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPSQEDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 271 NSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
NS M YI+FVADRLL + ++ +A
Sbjct: 240 NSDSMRLYIQFVADRLLDALGYAKMYNVA 268
>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 251
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/230 (61%), Positives = 174/230 (75%), Gaps = 1/230 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE YK +++FWT EEVD++ D
Sbjct: 10 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFD 68
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 69 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 128
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FACVEG
Sbjct: 129 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEG 188
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
IFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + +
Sbjct: 189 IFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNK 238
>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 240
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 170/234 (72%), Gaps = 1/234 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ EP+L E RF +FPI+Y +W YK A ASFWTA+E+DLS+D WE+L D E+
Sbjct: 7 KNSDEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEKLTDGERF 66
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VL+FFAASDGIV ENL RF ++Q+PEAR FYGFQI ME +HSEMYS ++E YIK
Sbjct: 67 FISRVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIK 126
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D KE+ F+AI C+ +KA WAL WI +S F RL+ FA VEGI FSGSF AIFW
Sbjct: 127 DPKEQMVHFDAIHQFECIKKKADWALRWIDDRNSPFPVRLIAFAAVEGIMFSGSFAAIFW 186
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254
LKKRG+M GLT SNELISRDEGLH DFACLLY ++ + ++V+ ++ EAV +
Sbjct: 187 LKKRGVMKGLTHSNELISRDEGLHRDFACLLYKYIKHKPSQEQVYEIIKEAVSL 240
>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
Length = 312
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 190/269 (70%), Gaps = 5/269 (1%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAA 92
R+ + P +W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 93 SDGIVLENLAARFLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
+DGIV +NL F ++ IPEARAFYGFQ+AM+NIH+EMY+ L+ T + + + LF+
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAMKNIHAEMYTQLIITLVA-KENQAALFS 119
Query: 152 AIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A E++PCV KA+WA W++++ A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
FSNELISRDEGLHCDFAC+L+ + + H ++ +AV+IET F EAL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHEIISDAVDIETAFFREALKTPLLGM 239
Query: 271 NSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
NS M YI+FVADRLL + ++ +
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVG 268
>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
[shrimp white spot syndrome virus]
gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
gi|417072416|gb|AFX59565.1| wsv188 [White spot syndrome virus]
Length = 413
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 184/264 (69%), Gaps = 7/264 (2%)
Query: 31 EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFF 90
E RF PI ++ +WEMYKK A FWT EE+D +D + WE+L EK FI +LAFF
Sbjct: 62 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFF 121
Query: 91 AASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150
A+SDGIV+ENL R QIPEAR+F+ FQ+ ME+IH +Y L++ + D K+K LF
Sbjct: 122 ASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILF 181
Query: 151 NAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
NA ++ P + +K +WA++W+ S++ AE +V FA VEGIFFSG+F +IFW+K RG++PGL
Sbjct: 182 NAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGL 241
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRL----HWQKVHHMVHEAVEIETQFVCEALPCA 266
T SNE ISRDEGLH DFAC+ LL+K +++ +V EAV IE +F+ +LP
Sbjct: 242 TSSNEFISRDEGLHRDFACM---LLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 298
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
L+GMN LMSQYI+FVAD+LLV +
Sbjct: 299 LVGMNCKLMSQYIEFVADKLLVEM 322
>gi|27923845|sp|Q9QTF2.1|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
iridovirus]
Length = 312
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 191/269 (71%), Gaps = 5/269 (1%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAA 92
R+ + P +W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 93 SDGIVLENLAARFLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
+DGIV +NL F ++ IPEARAFYGFQ+A+ENIH+EMY+ L+ T + + + LF+
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVA-KENQAALFS 119
Query: 152 AIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A E++PCV KA+WA W++++ A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
FSNELISRDEGLHCDFAC+L+ + + H ++ +AV+IET F EAL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 271 NSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
NS M YI+FVADRLL + ++ ++
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVS 268
>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
Length = 413
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 184/264 (69%), Gaps = 7/264 (2%)
Query: 31 EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFF 90
E RF PI ++ +WEMYKK A FWT EE+D +D + WE+L EK FI +LAFF
Sbjct: 62 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFF 121
Query: 91 AASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150
A+SDGIV+ENL R QIPEAR+F+ FQ+ ME+IH +Y L++ + D K+K LF
Sbjct: 122 ASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILF 181
Query: 151 NAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
NA ++ P + +K +WA++W+ S++ AE +V FA VEGIFFSG+F +IFW+K RG++PGL
Sbjct: 182 NAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGL 241
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRL----HWQKVHHMVHEAVEIETQFVCEALPCA 266
T SNE ISRDEGLH DFAC+ LL+K +++ +V EAV IE +F+ +LP
Sbjct: 242 TSSNEFISRDEGLHRDFACM---LLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 298
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
L+GMN LMSQYI+FVAD+LLV +
Sbjct: 299 LVGMNCKLMSQYIEFVADKLLVEM 322
>gi|441432445|ref|YP_007354487.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383525|gb|AGC02051.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 401
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/268 (50%), Positives = 186/268 (69%), Gaps = 3/268 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFIS 84
EPIL ++R+ ++PI+Y VW+ YK W EEVDLS+DV W LL ++++ FI
Sbjct: 82 EPILSTASERYTVYPIQYNNVWKNYKDQLKINWVVEEVDLSKDVSDWNNLLSENDRIFIM 141
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFA++DGIV N+ ++ ++I EA YG Q MEN H EMYSL+L+T++KD
Sbjct: 142 HVLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDI 201
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K +L AI+ +P + +KA W WI S ++A +LV FA VEG+FFSGSF +IFWLK R
Sbjct: 202 LKDKLIKAIKTMPSIKKKADWCKKWIKSDKTYAHKLVAFAIVEGVFFSGSFASIFWLKTR 261
Query: 205 --GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
+MPGL SN+ I+RDE H + A +L+SLL+ RL VH ++ EA++IE +F+ ++
Sbjct: 262 QGNVMPGLIKSNKFIARDENKHVELASILFSLLKNRLKESVVHEIIDEAIQIEDEFINDS 321
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LPC L+GMNS LMSQYIK+VADRLLV +
Sbjct: 322 LPCRLLGMNSQLMSQYIKYVADRLLVQL 349
>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
iridovirus]
Length = 312
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 190/269 (70%), Gaps = 5/269 (1%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAA 92
R+ + P +W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 93 SDGIVLENLAARFLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
+DGIV +NL F ++ IPEARAFYGFQ+A+ENIH+EMY+ L+ T + + + LF+
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVA-KENQAALFS 119
Query: 152 AIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A E++PCV KA+WA W++++ A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
FSNELISRDEGLHCDFAC+L+ + + H ++ +AV+IET F EAL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHEIISDAVDIETAFFREALKTPLLGM 239
Query: 271 NSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
NS M YI+FVADRLL + ++ +
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVG 268
>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 277
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/235 (60%), Positives = 177/235 (75%), Gaps = 2/235 (0%)
Query: 65 LSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAM 124
++ D +H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+
Sbjct: 1 MTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAI 60
Query: 125 ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA 184
ENIHSEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FA
Sbjct: 61 ENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFA 120
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKV 244
CVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + + +
Sbjct: 121 CVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKC--TVI 178
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
+V EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++ ++
Sbjct: 179 EDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS 233
>gi|260909050|gb|ACX54162.1| RR2 protein, partial [White spot syndrome virus]
gi|260909052|gb|ACX54163.1| RR2 protein, partial [White spot syndrome virus]
gi|260909054|gb|ACX54164.1| RR2 protein, partial [White spot syndrome virus]
gi|260909056|gb|ACX54165.1| RR2 protein, partial [White spot syndrome virus]
Length = 349
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 184/264 (69%), Gaps = 7/264 (2%)
Query: 31 EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFF 90
E RF PI ++ +WEMYKK A FWT EE+D +D + WE+L EK FI +LAFF
Sbjct: 47 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFF 106
Query: 91 AASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150
A+SDGIV+ENL R QIPEAR+F+ FQ+ ME+IH +Y L++ + D K+K LF
Sbjct: 107 ASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILF 166
Query: 151 NAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
NA ++ P + +K +WA++W+ S++ AE +V FA VEGIFFSG+F +IFW+K RG++PGL
Sbjct: 167 NAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGL 226
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRL----HWQKVHHMVHEAVEIETQFVCEALPCA 266
T SNE ISRDEGLH DFAC+ LL+K +++ +V EAV IE +F+ +LP
Sbjct: 227 TSSNEFISRDEGLHRDFACM---LLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 283
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
L+GMN LMSQYI+FVAD+LLV +
Sbjct: 284 LVGMNCKLMSQYIEFVADKLLVEM 307
>gi|56555145|gb|AAV98100.1| RR2 protein [White spot syndrome virus]
Length = 328
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 184/264 (69%), Gaps = 7/264 (2%)
Query: 31 EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFF 90
E RF PI ++ +WEMYKK A FWT EE+D +D + WE+L EK FI +LAFF
Sbjct: 38 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFF 97
Query: 91 AASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150
A+SDGIV+ENL R QIPEAR+F+ FQ+ ME+IH +Y L++ + D K+K LF
Sbjct: 98 ASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILF 157
Query: 151 NAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
NA ++ P + +K +WA++W+ S++ AE +V FA VEGIFFSG+F +IFW+K RG++PGL
Sbjct: 158 NAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGL 217
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRL----HWQKVHHMVHEAVEIETQFVCEALPCA 266
T SNE ISRDEGLH DFAC+ LL+K +++ +V EAV IE +F+ +LP
Sbjct: 218 TSSNEFISRDEGLHRDFACM---LLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 274
Query: 267 LIGMNSSLMSQYIKFVADRLLVHI 290
L+GMN LMSQYI+FVAD+LLV +
Sbjct: 275 LVGMNCKLMSQYIEFVADKLLVEM 298
>gi|451927338|gb|AGF85216.1| reductase small subunit [Moumouvirus goulette]
Length = 398
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/275 (49%), Positives = 189/275 (68%), Gaps = 3/275 (1%)
Query: 19 EQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-D 77
E ++ EPIL ++R+ ++PI Y VW+ YK W EEVDLS+DV W LL D
Sbjct: 72 ENDKIITEPILSTASERYTVYPIVYNNVWKNYKDQLKINWVVEEVDLSKDVSDWNNLLSD 131
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
+++ FI HVLAFFA++DGIV N+ ++ ++I EA YG Q MEN H EMYSL+L+
Sbjct: 132 NDRLFIMHVLAFFASADGIVNANIKENLIDIVKIKEAECAYGKQFEMENAHGEMYSLMLD 191
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
T++KD K +L AI+ +P + +KA+W WI S ++A +LV FA VEG+FFSGSF +
Sbjct: 192 TFVKDDILKDKLIKAIKTMPSIKKKAEWCKKWIKSDKTYAHKLVAFATVEGVFFSGSFAS 251
Query: 198 IFWLKKR--GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
IFWLK R +MPGL SN+ I+RDE H + A +L+SLL+ +L V+ ++ EA++IE
Sbjct: 252 IFWLKTRQGNVMPGLIKSNKFIARDENKHVELASILFSLLKNKLKESVVYEIIDEAIQIE 311
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+F+ ++LPC L+GMNS LMSQYIK+VADRLLV +
Sbjct: 312 DEFINDSLPCRLLGMNSELMSQYIKYVADRLLVQL 346
>gi|409049898|gb|EKM59375.1| hypothetical protein PHACADRAFT_249825 [Phanerochaete carnosa
HHB-10118-sp]
Length = 221
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/217 (63%), Positives = 169/217 (77%), Gaps = 2/217 (0%)
Query: 49 MYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLN 107
MYKKA+ASFWTAEE+DL D+ W ++L E+ FISHVLAFFAASDGIV ENL RF N
Sbjct: 1 MYKKAEASFWTAEELDLGHDLVDWNDKLNPDERRFISHVLAFFAASDGIVNENLVERFSN 60
Query: 108 DIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWAL 167
++Q EAR FYGFQ+ +ENIHSE YSLL++TYIKD +E+ LF+AI+ IPC+ +KA WAL
Sbjct: 61 EVQAAEARCFYGFQVMIENIHSETYSLLIDTYIKDPQERDFLFDAIDTIPCIKKKADWAL 120
Query: 168 DWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 226
WI + SF ERL+ FA VEGIFFSG F +IFWLKKRGLMPGLTFSNELISRDEG+H D
Sbjct: 121 RWISNKQSSFGERLIAFATVEGIFFSGCFASIFWLKKRGLMPGLTFSNELISRDEGMHTD 180
Query: 227 FACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
FACLL+ L++R H + ++ EAVEIE +F+ +
Sbjct: 181 FACLLFHHLKRRPHPDIIKTIITEAVEIEKEFLTGGI 217
>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|77416594|sp|Q7T6Y9.2|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|339061248|gb|AEJ34552.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
Length = 417
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 194/269 (72%), Gaps = 3/269 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL +++++ + PI+Y++VW+ YK ++WT EEVDL++DV W L D +++FI
Sbjct: 98 KEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFI 157
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAA+DGIV N+ ++ ++I EA YGFQ AMEN H EMYSL+L T++KD
Sbjct: 158 MHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDD 217
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+++L N+I+ +P + +KA W WI S ++A +LV F+ VEG+FFSGSF +IFWLK
Sbjct: 218 ALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKT 277
Query: 204 RGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
R + MPGL SN+ I+RDE H + AC++YSLL RL V+ ++ EA+EIE +F+ +
Sbjct: 278 REMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFIND 337
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+LPC L+GMNS LMSQYIK+VADRLLV +
Sbjct: 338 SLPCKLLGMNSELMSQYIKYVADRLLVDL 366
>gi|193206379|ref|NP_500944.2| Protein F58F9.1 [Caenorhabditis elegans]
gi|373254185|emb|CCD67640.1| Protein F58F9.1 [Caenorhabditis elegans]
Length = 581
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/263 (53%), Positives = 177/263 (67%), Gaps = 19/263 (7%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L N RF + PI ++ +WE YKKA A FWT+EEVDL +D+ HWE L E+ FIS
Sbjct: 307 EPLLAPNNNRFVVHPIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFISS 366
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENL +RF ++Q+ EAR FYGFQIA+ENIHSEMY+ LLE YI+D E
Sbjct: 367 ILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAE 426
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
++ LFNAI + KA W L WI ++ F+ERL A VEGIFFS SF AIFWLKKR
Sbjct: 427 RNILFNAITTFKFIKAKADWCLRWISDHNAPFSERLAAVAAVEGIFFSSSFAAIFWLKKR 486
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GL+PGLT SNELISR ++ +++E+V +E FV E+LP
Sbjct: 487 GLLPGLTHSNELISRKPA------------------ESRITEIINESVLVEQDFVRESLP 528
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M +Y++FVAD LL
Sbjct: 529 TNLIGMNQHMMCKYVEFVADLLL 551
>gi|351737466|gb|AEQ60501.1| ribonucleotide reductase small subunit [Acanthamoeba castellanii
mamavirus]
gi|398257152|gb|EJN40760.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 417
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 193/269 (71%), Gaps = 3/269 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL ++++ + PI+Y++VW+ YK ++WT EEVDL++DV W L D +++FI
Sbjct: 98 KEPILSLTSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFI 157
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAA+DGIV N+ ++ ++I EA YGFQ AMEN H EMYSL+L T++KD
Sbjct: 158 MHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDD 217
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+++L N+I+ +P + +KA W WI S ++A +LV F+ VEG+FFSGSF +IFWLK
Sbjct: 218 ALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKT 277
Query: 204 RGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
R + MPGL SN+ I+RDE H + AC++YSLL RL V+ ++ EA+EIE +F+ +
Sbjct: 278 REMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFIND 337
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+LPC L+GMNS LMSQYIK+VADRLLV +
Sbjct: 338 SLPCKLLGMNSELMSQYIKYVADRLLVDL 366
>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
Length = 310
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 179/253 (70%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ +L + EKHFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI D +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
IEN+P V +KA+W + WI S + A RL+ F VEG+FF+GSFCAI++ +KRGL+ GL
Sbjct: 124 IENVPTVKRKAEWVMKWISSDKTLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ Q+ + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 AELMCQYIEHTAD 256
>gi|444425042|ref|ZP_21220490.1| ribonucleotide reductase small subunit [Vibrio campbellii CAIM 519
= NBRC 15631]
gi|444241652|gb|ELU53173.1| ribonucleotide reductase small subunit [Vibrio campbellii CAIM 519
= NBRC 15631]
Length = 310
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ +L + EKHFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI D +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
IEN+P V +KA+W + WI S A RL+ F VEG+FF+GSFCAI++ +KRGL+ GL
Sbjct: 124 IENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ Q+ + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 AELMCQYIEHTAD 256
>gi|350532636|ref|ZP_08911577.1| Ribonucleoside-diphosphate reductase [Vibrio rotiferianus DAT722]
gi|424032641|ref|ZP_17772058.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-01]
gi|424037729|ref|ZP_17776454.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-02]
gi|408875699|gb|EKM14843.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-01]
gi|408895210|gb|EKM31674.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-02]
Length = 310
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ +L + EKHFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI D +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
IEN+P V +KA+W + WI S A RL+ F VEG+FF+GSFCAI++ +KRGL+ GL
Sbjct: 124 IENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ Q+ + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 AELMCQYIEHTAD 256
>gi|356577191|ref|XP_003556711.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 226
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 169/209 (80%)
Query: 54 QASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPE 113
AS + EEVDLS D++HW L D ++HFI+HVL FFAASD IVLENL +RF +IQ+ E
Sbjct: 13 DASCFYTEEVDLSSDLRHWATLSDGKRHFITHVLTFFAASDDIVLENLGSRFTKEIQLLE 72
Query: 114 ARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS 173
ARAFYGFQIA+ENIHSEMYSL LETY KDS +K+ LF AI IPC+ +KA+WAL I++S
Sbjct: 73 ARAFYGFQIAIENIHSEMYSLFLETYTKDSXKKNCLFRAINTIPCITKKAQWALQXINAS 132
Query: 174 DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 233
+SFAERL+ FACV GIFFSGSFCAIFWLKKRGLM GLTFSNE ISRDEGLH DFACLLY
Sbjct: 133 ESFAERLMAFACVXGIFFSGSFCAIFWLKKRGLMSGLTFSNEFISRDEGLHYDFACLLYL 192
Query: 234 LLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
LLRK+L +V +V +AVEIE +FVC
Sbjct: 193 LLRKKLSEGRVKEIVCDAVEIEREFVCRG 221
>gi|424046200|ref|ZP_17783763.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-03]
gi|408885457|gb|EKM24174.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-03]
Length = 310
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ +L + EKHFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI D +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
IEN+P V +KA+W + WI S A RL+ F VEG+FF+GSFCAI++ +KRGL+ GL
Sbjct: 124 IENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ Q+ + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVAQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 AELMCQYIEHTAD 256
>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
Length = 310
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ +L + EKHFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPDLVKLTEGEKHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI D +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
IEN+P V +KA+W + WI S A RL+ F VEG+FF+GSFCAI++ +KRGL+ GL
Sbjct: 124 IENVPTVQRKAQWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ Q+ + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 AELMCQYIEHTAD 256
>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-A]
Length = 313
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 189/265 (71%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAAS 93
R ++PI ++ ++E YK+A+A FW EEVDLS+D ++ +L + ++HFI HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV N+ L + EA FY FQ AMEN+H++MY L+ I D K + + NA
Sbjct: 65 DSIVNINVLNYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIIELIPDKKHQDLILNAF 124
Query: 154 ENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
+N+PCV +K WAL WI + +FAERLV FA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNVPCVRKKDDWALKWIENDKATFAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEG+H DFACL Y+ ++++L ++K+ M EAV+IE +F +ALP +L+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+++M +YI+FVADRLL+ + Q +
Sbjct: 245 ATMMCEYIEFVADRLLMQLGQPKYY 269
>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|390165255|gb|AFL64902.1| rr2b [Mamestra brassicae MNPV]
gi|401665659|gb|AFP95771.1| ribonucleotide reductase small subunit [Mamestra brassicae MNPV]
Length = 313
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 186/265 (70%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAAS 93
R ++PI ++ ++E YK+A+A FW EEVDLS+D ++ +L + ++HFI HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV N+ L + EA FY FQ AMEN+H++MY L+ T I D K++ + NA
Sbjct: 65 DSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAF 124
Query: 154 ENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
+NIPCV +K WAL W + + AERLV FA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNIPCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEG+H DFACL Y+ + ++L ++ + M EAV+IE +F +ALP AL+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+ +M +YI+FVADRLL+ + Q +
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYY 269
>gi|343495113|ref|ZP_08733308.1| Ribonucleoside-diphosphate reductase [Vibrio nigripulchritudo ATCC
27043]
gi|342823810|gb|EGU58402.1| Ribonucleoside-diphosphate reductase [Vibrio nigripulchritudo ATCC
27043]
Length = 310
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/253 (50%), Positives = 177/253 (69%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ ++L + E+HFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPDLQKLTEGEQHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI D +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
I+N+P V +KA+W + WI S RL+ F VEG+FF+GSFCAI++ +KRGL+ GL
Sbjct: 124 IDNVPTVKRKAQWVMKWISSDKPLPMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ + + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVTQAEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 ADLMCQYIEHTAD 256
>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 310
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 129/253 (50%), Positives = 175/253 (69%), Gaps = 1/253 (0%)
Query: 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAA 92
+F +FPI+Y+++W+ YK +A+FWT EE+D +QD+ +L + EKHFI HVLAFFA
Sbjct: 4 KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQ 63
Query: 93 SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNA 152
S+G++ ENL RF +I+I EAR F Q E IH+E Y+L LETYI +E+ RLFNA
Sbjct: 64 SEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPAVEERERLFNA 123
Query: 153 IENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
IEN+P V +KA+W + WI S RL+ F VEG+FF+GSFCAI++ +KR L+ GL
Sbjct: 124 IENVPTVKRKAEWVMKWISSDKPLTMRLIAFGLVEGLFFAGSFCAIYYFRKRSLLAGLAA 183
Query: 213 SNELISRDEGLHCDFACLLYSLL-RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SN+LI+RDEGLH F+ LL+ L + ++ Q+ + EAV IE +FV EALP LIGMN
Sbjct: 184 SNDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 272 SSLMSQYIKFVAD 284
+ LM QYI+ AD
Sbjct: 244 AELMCQYIEHTAD 256
>gi|22549454|ref|NP_689227.1| rr2b gene product [Mamestra configurata NPV-B]
gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-B]
Length = 313
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/265 (49%), Positives = 185/265 (69%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAAS 93
R ++PI ++ ++E YK+A+A FW EEVDLS+D ++ +L + ++HFI HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV N+ L + EA FY FQ AMEN+H++MY L+ T I D K++ + NA
Sbjct: 65 DSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAF 124
Query: 154 ENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
+NI CV +K WAL W + + AERLV FA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNISCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEG+H DFACL Y+ + ++L ++ + M EAV+IE +F +ALP AL+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+ +M +YI+FVADRLL+ + Q +
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYY 269
>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
Length = 313
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 179/265 (67%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAAS 93
R +FPI++ +W YK+A W EEVDLS+D + +L D E++FI HVLAFFAA+
Sbjct: 5 RKVLFPIQHNDLWRAYKQALDCMWKVEEVDLSKDCDDFTSKLNDDERYFIKHVLAFFAAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV NL ++ EA+ FY Q+ +E +H+EMY+LL+ I D E+ L NA
Sbjct: 65 DSIVNINLIEYMQQNVPELEAQYFYNQQVLIECVHTEMYNLLIHQLISDEHERDTLLNAF 124
Query: 154 ENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
E +PCV +K WA+ WI+SS +FAER+V FA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ERMPCVRKKTDWAMKWINSSTATFAERMVAFAIVEGVFFSGSFAAIFYIKTKGIMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEGLH DFACL Y+ + +L V M EAV IE +F ALP AL+GMN
Sbjct: 185 SNELISRDEGLHTDFACLYYNTRVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+ M YI+FVADRLLV +HQ F
Sbjct: 245 AQSMCDYIEFVADRLLVQLHQPKHF 269
>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
nucleopolyhedrovirus]
Length = 313
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 181/265 (68%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAAS 93
R + PI + +W YK+A W EEVD+S+D +E +L D E++FI HVLAFFAA+
Sbjct: 5 RKVLKPILHDDLWAAYKQAFDCMWKVEEVDMSRDYDDFESKLNDDERYFIKHVLAFFAAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV NL ++ EA+ FY Q+ +E +H+EMY+LL+E IKD E+ L NA
Sbjct: 65 DSIVNINLIEYMQRNVPELEAQYFYNLQVLIECVHTEMYNLLIEQLIKDEHERDTLLNAF 124
Query: 154 ENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
E++PCV +KA+WA+ WI S + + AER+V FA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 EHVPCVRKKAQWAMKWIESDTATLAERMVAFAIVEGVFFSGSFAAIFYIKTKGIMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEGLH DFACL Y + + ++L + M EAV IE +F ALP L+GMN
Sbjct: 185 SNELISRDEGLHTDFACLYYKTRVTEKLDSDTILSMFKEAVAIEKEFFTAALPVELLGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+ M +YI+FVADRLLV + Q F
Sbjct: 245 AQSMCEYIEFVADRLLVQLGQPKYF 269
>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
Length = 374
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 190/273 (69%), Gaps = 6/273 (2%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E RF +FP++Y +W YKKA ASFWT EEVDL++D+ WE++ D+E+ FI
Sbjct: 48 EEEPLLRENPNRFVIFPLKYHDIWAFYKKAVASFWTVEEVDLAKDMADWEKMTDNERFFI 107
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S VLAFFAASDGIV ENL RF ++Q+PEAR FYG QIA+ENIHSEMYS L+ETYI+D
Sbjct: 108 SRVLAFFAASDGIVNENLVERFSKEVQVPEARFFYGSQIAIENIHSEMYSKLIETYIRDE 167
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS--FAERLVGFACVEGIFFSGSFCAIFW- 200
KE++ LFNAI +PC+A+KA+WA+ + + FAER++ FA V G FS AI +
Sbjct: 168 KERNILFNAIFEVPCIAKKAEWAVKMGLQTITAPFAERVIAFAAVGGNIFSLGPVAIPFS 227
Query: 201 -LKKRGLMPGLTFS--NELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
LKK+G G + S LI DEG+H ++ +L +++++++ +AV IE +
Sbjct: 228 GLKKKGDWRGWSHSILRSLIQGDEGVHAISHVCCIQHIKNKLSQERIYYIIRDAVAIEQE 287
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
F+ E+LP +IGMN LM QYI++VAD LLV +
Sbjct: 288 FLSESLPVDMIGMNCRLMCQYIEYVADHLLVEL 320
>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
Length = 313
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/265 (49%), Positives = 184/265 (69%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAAS 93
R +FPI++ +W YK+A W EEVDLS+D + ++L D+E++FI +LAFFAA+
Sbjct: 5 RKVLFPIQHIDLWASYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFAAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV N+ + EA+ FY Q+ ++ IH+EMY+LL+ IKD K++ L N
Sbjct: 65 DSIVNINIIEHMQRTVPELEAQYFYNQQVLIQCIHTEMYNLLIHALIKDEKKQEMLLNGF 124
Query: 154 ENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
EN+PCV +KA+WA+ +I + AERLV FA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ENMPCVRRKAEWAMKYIDDEKITLAERLVAFAIVEGVFFSGSFAAIFYMKTKGVMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEGLH +FACL Y+ + ++L V+ M EAV IE +F EALP +L+GMN
Sbjct: 185 SNELISRDEGLHTNFACLYYNTRVDQKLDAPTVNDMFSEAVAIEMEFFAEALPESLVGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+++M +YI+FVADRLLV + ++
Sbjct: 245 ANMMRKYIEFVADRLLVQLKYPKMY 269
>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
Length = 313
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 184/265 (69%), Gaps = 3/265 (1%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAAS 93
R +FPI++ +W YK+A W EEVDLS+D + ++L D+E++FI +LAFFAA+
Sbjct: 5 RKVLFPIQHIDLWTAYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFAAA 64
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV N+ + EA+ FY Q+ +E IH+EMY+LL+ IKD +++ L N
Sbjct: 65 DSIVNINIIEHMQRTVPELEAQYFYNQQVLIECIHTEMYNLLIHALIKDEEKQATLLNGF 124
Query: 154 ENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 212
E++PCV +KA+WA+ +I + + + AERL+ FA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ESMPCVRRKAEWAMKYIENENVTLAERLIAFAIVEGVFFSGSFAAIFYMKTKGVMPGLTF 184
Query: 213 SNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMN 271
SNELISRDEGLH +FACL Y+ + ++L V M EAV IE +F EALP +L+GMN
Sbjct: 185 SNELISRDEGLHTNFACLYYNTRVDQKLDVPTVSDMFAEAVAIEMEFFAEALPESLVGMN 244
Query: 272 SSLMSQYIKFVADRLLVHIHQCSLF 296
+ +M +YI+FVADRLLV + ++
Sbjct: 245 AEMMRKYIEFVADRLLVQLKYPKIY 269
>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 339
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/296 (46%), Positives = 187/296 (63%), Gaps = 27/296 (9%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVL 87
+ + + R + PI++ +W+ YK A W EEVDL++D + W+ +L + E+HF+ H+L
Sbjct: 1 MSQADMRKVILPIQHANLWKAYKTALDCVWKVEEVDLTKDWEDWQNKLNEDERHFLKHIL 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA++D IV NL + EAR FY QI +EN+HSEMYSLL+ YIKD +EK
Sbjct: 61 AFFASADSIVNINLIDYVRGKVAELEARYFYDQQIFIENVHSEMYSLLIFEYIKDEQEKD 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSS-----------------------DSFAERLVGFA 184
L NA +I CV +KA+WAL W S+ A R+V FA
Sbjct: 121 TLLNAFNDIECVRKKAQWALKWTESAWWQDWLVNPATRWCNRLMGKQTPSELAVRMVAFA 180
Query: 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RKRLHW 241
VEG+FFSGSF AIF++K +G+MPGLTFSNELISRDEGLH +FACL Y+ +L
Sbjct: 181 IVEGVFFSGSFAAIFYIKTKGVMPGLTFSNELISRDEGLHTNFACLYYNEYIPEHDKLSS 240
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFI 297
+++ M EAVEIE +F ALPC+L+GMN+ M +YI+FVADRLLV ++Q F+
Sbjct: 241 ERILDMFIEAVEIEKEFFKTALPCSLLGMNTESMCRYIEFVADRLLVDLNQPKHFM 296
>gi|76163066|gb|AAX30834.2| SJCHGC08068 protein [Schistosoma japonicum]
Length = 230
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+++ + EP+L RF +FPI Y +W YKKA ASFWT EEVDLS+D HWE L E
Sbjct: 34 KDEIELEPLLKPNPHRFVLFPIEYHDIWHFYKKAVASFWTVEEVDLSKDFTHWESLKVGE 93
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFIS+VLAFFAASDGIVLENL RF ++QIPE R FYG QIA+ENIHSEMYSLL++TY
Sbjct: 94 RHFISYVLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTY 153
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
IKDSKE+ LFNAI N+ CVA+KA+WALDWI S S FAERLV FA VEG+FFSGSF AI
Sbjct: 154 IKDSKERDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAERLVAFAAVEGVFFSGSFAAI 213
Query: 199 FWLKKRGL 206
FWLK L
Sbjct: 214 FWLKSEDL 221
>gi|406707526|ref|YP_006757878.1| ribonucleotide reductase small subunit [alpha proteobacterium
HIMB59]
gi|406653302|gb|AFS48701.1| Ribonucleotide reductase, small chain [alpha proteobacterium
HIMB59]
Length = 329
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 177/270 (65%), Gaps = 20/270 (7%)
Query: 37 CMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGI 96
+FPI+++++W+ YK+ +FWT EEV L D++ + L + EKHFI HVLAFFA S+ +
Sbjct: 8 SIFPIQHQEIWDRYKQHVQAFWTPEEVSLQDDLRDLKTLNEGEKHFIKHVLAFFANSEAM 67
Query: 97 VLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENI 156
+ ENLA+RF N+I IPE+R F Q+ E+IH+EMY L +E Y++D EK +LF+AI+N+
Sbjct: 68 INENLASRFYNEILIPESRLFITMQMLNESIHAEMYGLQIEAYVEDPAEKDKLFSAIQNV 127
Query: 157 PCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 216
PC+ +KA+W W++ + RL+ F VEG+FF+GSFCAI++ +KRGL+PGL SN+
Sbjct: 128 PCINKKAQWVSKWLNGKQNLLTRLIAFGLVEGLFFAGSFCAIYYFRKRGLLPGLALSNDW 187
Query: 217 ISRDEGLHCDFACLLYSLLRKRLH--------------------WQKVHHMVHEAVEIET 256
I+RDEG+H F+ L++ L + + + +V EAVE E
Sbjct: 188 IARDEGMHFSFSALMFKTLSNKFNNGTLSDEDIKSMDLIPNLVSQSEFEEIVREAVEFEK 247
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRL 286
+FV +ALP LIGMN +M YI+ V+DR+
Sbjct: 248 EFVTDALPVDLIGMNKEMMCMYIEAVSDRI 277
>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
Length = 339
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 181/289 (62%), Gaps = 27/289 (9%)
Query: 35 RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAAS 93
R + PI+++++W YK A W EEVDLS+D + W +L + E+ FI H+LAFFA++
Sbjct: 7 RKVILPIQHEKLWRAYKTALDCMWKVEEVDLSRDYEDWCTKLNERERFFIKHILAFFASA 66
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
D IV NL + + EAR FY QI +EN+HSEMYSLL+ YIK+ KE++ L NA
Sbjct: 67 DSIVNINLIDYVRDAVGELEARYFYDQQILIENVHSEMYSLLIFEYIKNEKEQNELLNAF 126
Query: 154 ENIPCVAQKAKWALDWIHSS-----------------------DSFAERLVGFACVEGIF 190
E++ CV +KA+WAL W SS A R+V FA VEG+F
Sbjct: 127 EDVKCVRKKAQWALKWTESSWWRDWLVNPLVKLWRTWRDGSSASKLARRMVAFAIVEGVF 186
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RKRLHWQKVHHM 247
FSGSF AIF++K +G+MPGLTFSNELISRDEGLH +FACL Y+ R ++ ++ M
Sbjct: 187 FSGSFAAIFFIKTKGIMPGLTFSNELISRDEGLHTNFACLYYNEYIDERDKMSSAEILDM 246
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAV IE +F ALPC L+GMNS M +YI+FVADRLL + Q F
Sbjct: 247 FVEAVNIEKEFFTSALPCDLLGMNSRAMCEYIEFVADRLLTELQQPKHF 295
>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit, partial
[Drosophila melanogaster]
Length = 214
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 151/191 (79%), Gaps = 1/191 (0%)
Query: 101 LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVA 160
L RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D ++ LFNAIE +P V
Sbjct: 1 LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60
Query: 161 QKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 219
+KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISR
Sbjct: 61 RKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISR 120
Query: 220 DEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYI 279
DEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP LIGMN LMSQYI
Sbjct: 121 DEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMNCDLMSQYI 180
Query: 280 KFVADRLLVHI 290
+FVADRLLV +
Sbjct: 181 EFVADRLLVEL 191
>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
Length = 318
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 179/268 (66%), Gaps = 7/268 (2%)
Query: 30 MEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLA 88
M R +FPI + +W+ YKKA W EE+D+S+D W +L D E+ F+ HVLA
Sbjct: 1 MSSVSRKTLFPIVNEDLWQSYKKALDCHWKVEEIDMSKDFDDWNNKLNDKERFFLKHVLA 60
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFAA+D IV N+ + + EA FY Q ++E +H+EMY++L+ YIKD +E R
Sbjct: 61 FFAAADVIVNTNIIEHMQSAVPEMEASFFYAQQTSIECVHTEMYNILVVEYIKDPQECDR 120
Query: 149 LFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLK--KRG 205
+ NAIE+I V +KA WA WI S + +FAER+V FA VEG+FFSGSF AI+++K K+G
Sbjct: 121 ILNAIEHIDSVKRKATWAQKWIESQTATFAERMVAFAIVEGVFFSGSFAAIYYIKDTKKG 180
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLL---RKRLHWQKVHHMVHEAVEIETQFVCEA 262
+PGLT+SNELISRDEGLH DFACL Y+ +L KV +M EAV+IE F A
Sbjct: 181 ALPGLTYSNELISRDEGLHTDFACLYYNKYIAKEDKLSESKVLNMFKEAVDIEKDFFTNA 240
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP A++GMN+ M +YI+FVADRLL+ +
Sbjct: 241 LPVAMLGMNAHSMCEYIEFVADRLLIEL 268
>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
Length = 419
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 187/293 (63%), Gaps = 7/293 (2%)
Query: 2 GSLKNETENEVNQREQGEQEQEDQEPILMEQNQ--RFCMFPIR----YKQVWEMYKKAQA 55
LK T + + + E + E EP+ +E+ RF +F + Y V+++YKK A
Sbjct: 70 SDLKRTTIHLPTEFRKKEMDGEIVEPMCVEEEDFDRFILFNGKTEHEYADVFQLYKKQTA 129
Query: 56 SFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEAR 115
FW EE+DLS D + WE EKHF+ VLAFFA+ D IV+EN+ F N+I IP+ R
Sbjct: 130 LFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFFASLDQIVMENIGLNFKNEIVIPQIR 189
Query: 116 AFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SD 174
+ Q A E +H E YSLL++TY +D++E+ + +I+ +P + +KA WA W++ +
Sbjct: 190 QHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPIIEKKALWAEKWMNPETA 249
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
S AERLVGF C+EG+ FSGSFCAI+WLKKR GL+F+N LI+RDEGLH + L+Y
Sbjct: 250 SLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKH 309
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
L+ RL ++VH + AV +E +F+ ALP ALIG++ M++YIKFVAD L
Sbjct: 310 LKNRLPRERVHEIFKHAVSVECEFISSALPVALIGISEKSMTEYIKFVADYWL 362
>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
Length = 342
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 190/281 (67%), Gaps = 7/281 (2%)
Query: 23 EDQEPILMEQNQ--RFCMF----PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL 76
E +EP+ E ++ RF +F Y V+ +YKK A FWT EE+DLS+DV+ W++
Sbjct: 14 EVREPMCHEDSEFDRFILFNQKSEFEYADVYALYKKEIACFWTVEEMDLSEDVECWDKSS 73
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
E+HFI H+LAFFA+ D IV+EN++ F ++I IP+ R+ + Q A+E+IH E YS+L+
Sbjct: 74 SDEQHFIIHILAFFASLDQIVMENVSVNFGDEIVIPQVRSHFAIQNAIESIHGEAYSILI 133
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSF 195
+TY+K+S+++ ++ +++ +P + +KA+W W+ S AERLV F CVEG+ FSG+F
Sbjct: 134 QTYVKNSQQQSKILRSVQEMPIIRKKAQWVTSWMDPETCSLAERLVAFTCVEGVQFSGAF 193
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
CAI+WLKK+G GL F+N LI+RDEGLH + + ++Y+ L+ RL VH + +A IE
Sbjct: 194 CAIYWLKKQGRFRGLCFANSLIARDEGLHAEGSVMIYNHLKHRLPVAVVHDIFGQATTIE 253
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ EALP +LIG+N+ MS YI++++D L + LF
Sbjct: 254 KEFIREALPVSLIGINAGTMSTYIEYISDFWLEKLGYPKLF 294
>gi|375073645|gb|AFA34381.1| ribonucleotide diphosphate reductase, partial [Ostrea edulis]
Length = 233
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 138/169 (81%)
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLV 181
IAMENIHSEMYSLL++TYI D EK RL IE IP V +KA WA+ W+ SSD +AERLV
Sbjct: 1 IAMENIHSEMYSLLIDTYISDEVEKSRLLRGIETIPSVGKKANWAIKWMESSDVYAERLV 60
Query: 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW 241
F+ VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY L +L
Sbjct: 61 AFSAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKHLETKLSQ 120
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+K++ ++ AVEIE +FV E+LP LIGMNS LM+QYI+FVADRLL+ +
Sbjct: 121 EKIYEIIGGAVEIEKEFVTESLPVDLIGMNSKLMAQYIEFVADRLLLEL 169
>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
Length = 419
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 187/293 (63%), Gaps = 7/293 (2%)
Query: 2 GSLKNETENEVNQREQGEQEQEDQEPILMEQNQ--RFCMFPIR----YKQVWEMYKKAQA 55
LK T + + + E E E EP+ +E+ RF +F + Y V+++YKK A
Sbjct: 70 SDLKKTTIHLPTEFRRKEVEGEIVEPMCVEEEDFDRFILFNGKTEHEYADVFQLYKKQTA 129
Query: 56 SFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEAR 115
FW EE+D+S D + W+ EKHF+ VLAFFA+ D IV+EN+ F N+I IP+ R
Sbjct: 130 LFWVVEEIDMSGDSKDWDDASSDEKHFLKLVLAFFASLDQIVMENIGLNFKNEIVIPQIR 189
Query: 116 AFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SD 174
+ Q A E +H E YSLL++TY +D++E+ + +I+ +P + +KA WA W++ +
Sbjct: 190 QHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPIIEKKALWAEKWMNPETA 249
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
S AERLVGF C+EG+ FSGSFCAI+WLKKR GL+F+N LI+RDEGLH + L+Y
Sbjct: 250 SLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKH 309
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
LR +L ++VH + AV +E +F+ ALP ALIG++ M++YIKFVAD L
Sbjct: 310 LRNKLPQERVHEIFEHAVSVECEFISSALPVALIGISEKSMTEYIKFVADYWL 362
>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ectropis obliqua NPV]
gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ectropis obliqua NPV]
Length = 341
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/293 (46%), Positives = 181/293 (61%), Gaps = 28/293 (9%)
Query: 32 QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFF 90
++ R + PI + +W M K A W EE DLS+D W +L E+ F+ H+LAFF
Sbjct: 5 KDMRKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFF 64
Query: 91 AASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150
A++D IV NL + EAR FY QI +EN+HSEMYSLL+ YIK+S+E+++L
Sbjct: 65 ASADTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLL 124
Query: 151 NAIENIPCVAQKAKWALDWIHSS------------------------DSFAERLVGFACV 186
NA + I C+ +KA+WAL W S A R++ FA V
Sbjct: 125 NAFDRIDCIKKKAQWALKWTESKWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIV 184
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS---LLRKRLHWQK 243
EGIFFSGSF AIF++K +GLMPGLTFSNELISRDEGLH DFAC+ Y+ + ++L Q+
Sbjct: 185 EGIFFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINEKLSPQQ 244
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ M EAV+IE +F ALPC L+G+N++ M +YI+FVADRLLV + Q F
Sbjct: 245 ILSMFIEAVDIEKEFFTTALPCYLLGINATEMCKYIEFVADRLLVELRQPKHF 297
>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 318
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 177/268 (66%), Gaps = 7/268 (2%)
Query: 30 MEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLA 88
M R + PI + +W+ YKKA W EE+D+S+D W ++L D E+ F+ HVLA
Sbjct: 1 MSSVSRKTLLPIVNEDLWQSYKKAVDCHWKVEEIDMSKDFDDWNKKLNDKERFFLKHVLA 60
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFAA+D IV N+ + + EA FY Q +E +H+EMY++L+ YIKD +E R
Sbjct: 61 FFAAADVIVNTNIIEHMQSAVPELEASFFYAQQTFIECVHTEMYNILVVEYIKDPQECDR 120
Query: 149 LFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLK--KRG 205
+ NAIE+I V QKA WA WI + S +FAER+V FA VEG+FFSGSF AI+++K K+G
Sbjct: 121 ILNAIEHIDSVKQKAAWAQKWIENQSATFAERMVAFAIVEGVFFSGSFAAIYYIKDSKKG 180
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLL---RKRLHWQKVHHMVHEAVEIETQFVCEA 262
+PGLT+SNELISRDEGLH DFACL Y+ + +L KV M EAV+IE F A
Sbjct: 181 ALPGLTYSNELISRDEGLHTDFACLYYNKYIPEKNKLSKTKVLSMFVEAVDIEKDFFTNA 240
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP A++GMNS M +YI+FVADRLL +
Sbjct: 241 LPVAMLGMNSQSMCEYIEFVADRLLFEL 268
>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
Length = 345
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 185/276 (67%), Gaps = 3/276 (1%)
Query: 14 QREQGE-QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
Q+E+ + +E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +
Sbjct: 12 QKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDF 71
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
++L D +K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENIHSE+Y
Sbjct: 72 QKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIHSEVY 131
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFF 191
S++++ + KD K LF I N+P V KA + WI + DS +AERLV FA EGIF
Sbjct: 132 SMMVDAFFKDPK-NIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQ 190
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
+G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR + + + + ++ EA
Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEA 250
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
VEIE ++ +LP GM+ + YI+FVAD LL
Sbjct: 251 VEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLL 286
>gi|154283275|ref|XP_001542433.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
gi|150410613|gb|EDN06001.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
Length = 255
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 153/204 (75%), Gaps = 9/204 (4%)
Query: 4 LKNETENEVNQREQGEQEQ-------EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQAS 56
L +TE + E+GE++ E EP+L E RF +FP++Y ++W+MYKKA+AS
Sbjct: 50 LLKKTETSARKPEEGEKKALTGVKALEADEPLLQENPNRFVLFPLKYHEIWQMYKKAEAS 109
Query: 57 FWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEAR 115
FWTAEE+DLS+D+ W RL D E++FISHVLAFFAASDGIV ENL RF ++Q+PEAR
Sbjct: 110 FWTAEEIDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEAR 169
Query: 116 AFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS 175
FYGFQI MENIHSE YSLL++TYIK+ K++ LF+AIE IPC+ +KA WA+ WI DS
Sbjct: 170 CFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIETIPCIRKKADWAIRWIEDKDS 229
Query: 176 -FAERLVGFACVEGIFFSGSFCAI 198
FA+RLV FA VEGIFFSGSF +I
Sbjct: 230 TFAQRLVAFAAVEGIFFSGSFASI 253
>gi|398366047|ref|NP_011696.3| ribonucleotide-diphosphate reductase subunit RNR4 [Saccharomyces
cerevisiae S288c]
gi|1710402|sp|P49723.1|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
AltName: Full=Ribonucleotide reductase R2 subunit 2;
AltName: Full=Ribonucleotide reductase small subunit 2
gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
gi|285812375|tpg|DAA08275.1| TPA: ribonucleotide-diphosphate reductase subunit RNR4
[Saccharomyces cerevisiae S288c]
gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
gi|349578387|dbj|GAA23553.1| K7_Rnr4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299434|gb|EIW10528.1| Rnr4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 345
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 185/276 (67%), Gaps = 3/276 (1%)
Query: 14 QREQGE-QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
Q+E+ + +E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +
Sbjct: 12 QKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDF 71
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
++L D +K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENI+SE+Y
Sbjct: 72 QKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVY 131
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFF 191
S++++ + KD K LF I N+P V KA + WI + DS +AERLV FA EGIF
Sbjct: 132 SMMVDAFFKDPK-NIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQ 190
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
+G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR + + + + ++ EA
Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEA 250
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
VEIE ++ +LP GM+ + YI+FVAD LL
Sbjct: 251 VEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLL 286
>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
Length = 342
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 189/283 (66%), Gaps = 10/283 (3%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
+EQGE E+ IL+ Q F + V+ +YKK A FWT EE+DL++DV W++
Sbjct: 21 QEQGEFER----FILLNQKTEF-----EFADVYALYKKEIACFWTVEEIDLNEDVACWDK 71
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
+ E+ FI H+LAFFA+ D IV+EN++ F ++I+IP+ R+ + Q A+E+IH E Y+L
Sbjct: 72 CSEDEQRFIGHILAFFASLDQIVMENVSVNFGDEIKIPQIRSHFAMQNAIESIHGETYAL 131
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSG 193
L++TYIKD +++ + +I+ +P + +KA+W W+ S AERLV F CVEG+ FSG
Sbjct: 132 LIQTYIKDPEKQVTMLRSIQEMPIITKKAQWVTAWMDPEVASLAERLVAFTCVEGVQFSG 191
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
+FCAI+WLKK+G GL F+N LI+RDEGLH + + ++Y+ L+ RL VH + +AV
Sbjct: 192 AFCAIYWLKKQGRFRGLCFANSLIARDEGLHAEGSVMIYNHLKHRLPVAVVHDIFTDAVA 251
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+E +F+ E+LP +LIG+N+ MS YI++V+D + + LF
Sbjct: 252 LEKEFIRESLPVSLIGINADTMSSYIEYVSDFWIQRLGYPKLF 294
>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
Length = 328
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 179/269 (66%), Gaps = 2/269 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +++L D +
Sbjct: 2 KEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQ 61
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENI+SE+YS++++ +
Sbjct: 62 KTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAF 121
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
KD K LF I N+P V K + WI + DS +AERLV FA EGIF +G++ ++
Sbjct: 122 FKDPK-NIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASM 180
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWL + +MPGL +N I RD G + DF+CLL++ LR + + + + ++ EAVEIE ++
Sbjct: 181 FWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEY 240
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+LP GM+ + YI+FVAD LL
Sbjct: 241 YSNSLPVEKFGMDLKSIHTYIEFVADGLL 269
>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765447|gb|EHN06955.1| Rnr4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 345
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 184/276 (66%), Gaps = 3/276 (1%)
Query: 14 QREQGE-QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
Q+E+ + +E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +
Sbjct: 12 QKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDF 71
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
++L D +K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENI+SE+Y
Sbjct: 72 QKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVY 131
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFF 191
S++++ + KD K LF I N+P V K + WI + DS +AERLV FA EGIF
Sbjct: 132 SMMVDAFFKDPK-NIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVAFAAKEGIFQ 190
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
+G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR + + + + ++ EA
Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEA 250
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
VEIE ++ +LP GM+ + YI+FVAD LL
Sbjct: 251 VEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLL 286
>gi|403270691|ref|XP_003927300.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 130/272 (47%), Positives = 166/272 (61%), Gaps = 44/272 (16%)
Query: 27 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHV 86
P+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D++HWE L E++F+SHV
Sbjct: 71 PLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIRHWESLKPEERYFVSHV 130
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
LAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD E
Sbjct: 131 LAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPNES 190
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGL 206
E P V+ F S S + L K
Sbjct: 191 -------EEKPVVSHLP--------------------------FESSSALNMSMLDK--- 214
Query: 207 MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCA 266
E +D+GLHCDFACL++ L + ++V ++ AV IE +F+ EALP
Sbjct: 215 --------ENAEKDKGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVK 266
Query: 267 LIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 267 LIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 298
>gi|401625558|gb|EJS43558.1| rnr4p [Saccharomyces arboricola H-6]
Length = 346
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 177/269 (65%), Gaps = 2/269 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + ++ L D +
Sbjct: 19 KEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDSEDFQELTDDQ 78
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K ++ ++LA +SD IV + L F +Q PE ++FYGFQI MENI++E+YS++++ +
Sbjct: 79 KAYVGNLLALSISSDNIVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYAEVYSMMVDAF 138
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
KD K LF + +P V KA + WI + DS +AERLV FA EGIF +G++ ++
Sbjct: 139 FKDPK-NIPLFKEVATLPEVKDKAAFVEKWIFNDDSLYAERLVAFAAKEGIFQAGNYASM 197
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWL + +MPGL +N I RD G + DF+CLL++ LR + + + ++ EAVEIE ++
Sbjct: 198 FWLTDKNIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNVKITERIITEAVEIEKEY 257
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+LP G++ + YI+FVAD LL
Sbjct: 258 YSNSLPVEKFGIDLKSIHSYIEFVADGLL 286
>gi|401840133|gb|EJT43042.1| RNR4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 345
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 178/275 (64%), Gaps = 2/275 (0%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE 73
Q +E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + ++
Sbjct: 13 QERHDMKESEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQ 72
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
L + +K +I ++LA +SD IV + L F +Q PE ++FYGFQI MENI++E+YS
Sbjct: 73 TLTEDQKAYIGNLLALSISSDNIVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYAEVYS 132
Query: 134 LLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFS 192
++++ + K+ LF I +P V KA + WI + DS +AERLV FA EGIF +
Sbjct: 133 MMVDAFFKEPT-NIPLFKEIATLPEVKNKAAFIEKWITNDDSLYAERLVAFAAKEGIFQA 191
Query: 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAV 252
G++ ++FWL + ++PGLT +N I RD G + DF+CLL++ LR + + + ++ EAV
Sbjct: 192 GNYASVFWLTNKNILPGLTMANRNICRDRGAYTDFSCLLFAHLRTKPNVKITERIITEAV 251
Query: 253 EIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EIE ++ +LP GM+ + YI+FVAD LL
Sbjct: 252 EIEKEYYSNSLPVEKFGMDLKNIHTYIEFVADGLL 286
>gi|403182337|gb|EJY57322.1| AAEL017375-PA [Aedes aegypti]
Length = 373
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 156/230 (67%), Gaps = 24/230 (10%)
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
+EVDLS+D+ WE+L EKHFISHVLAFF ASDG + ENL RF ++Q+ EAR FYGF
Sbjct: 114 KEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGF 173
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
Q+AMEN+HSEMYSLL++TYI+DSK++ + N F ER+
Sbjct: 174 QMAMENVHSEMYSLLIDTYIRDSKQRDKKAN------------------------FGERV 209
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VE IFFSGSF +I WLKKRGL PGLTFS ELISRDEGLH +F L++ L ++
Sbjct: 210 VAFAVVEEIFFSGSFASINWLKKRGLTPGLTFSYELISRDEGLHMEFVSLMFKYLVQKPS 269
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ V + E V I+ +F+ + LP L+GMN L+SQYI+FVAD LL+ +
Sbjct: 270 QEHVIEFIRETVLIKQEFLTKTLPVDLLGMNCDLLSQYIEFVADGLLLEL 319
>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
Length = 309
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 169/260 (65%), Gaps = 3/260 (1%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL-SQDVQHWERLLDSEKHFISHVLAFFAA 92
+R+ PI+ +++M+KK FWT +E+++ S D++ W L E+ F +L FFA+
Sbjct: 2 ERYVTPPIKNLDLYDMWKKHVRCFWTKDEINITSSDLREWNDLTPDERQFFKCILGFFAS 61
Query: 93 SDGIVLENLAARFLNDIQIP-EARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
++ IV +NLA RFL D I EAR FY FQIAMENIHSE Y LL Y+ + KE++ L
Sbjct: 62 TNIIVSDNLALRFLADPNISREARCFYSFQIAMENIHSETYIELLTAYVPEEKERNELLY 121
Query: 152 AIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
+I + PC+ K++WA+ W++ ++AERLV FA VEGI FS SF I+W+K+ GL+ GL
Sbjct: 122 SIISWPCLNVKSRWAVKWMNDEFATYAERLVAFAVVEGIMFSSSFAGIYWIKQSGLLAGL 181
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
T +NE ISRDEGLHC FAC +Y ++ RL KV +V E E+E FV AL L+GM
Sbjct: 182 TQANEFISRDEGLHCTFACTMYGKIKPRLPDTKVRKIVLEGCEVEKLFVKHALRKPLLGM 241
Query: 271 NSSLMSQYIKFVADRLLVHI 290
NS LM Y+ FV D LL +
Sbjct: 242 NSHLMETYVNFVTDNLLTDL 261
>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
Length = 241
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 134/165 (81%)
Query: 126 NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFAC 185
++ +EMYSLL++ Y+KD EK LF AIE IPCV +KA WAL WI SSDSFAERL+ FAC
Sbjct: 20 SLLAEMYSLLIDQYVKDPAEKSHLFRAIETIPCVKKKADWALKWIDSSDSFAERLLAFAC 79
Query: 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVH 245
+EGIFFSGSFC+I+WLKKRGLMPGLTFSNELISRDEGLH DFACLLY +L + + V
Sbjct: 80 IEGIFFSGSFCSIYWLKKRGLMPGLTFSNELISRDEGLHRDFACLLYQMLNNKPDEEVVR 139
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+V EAVEIE +FVC++LPCAL+GMN+ +MS YI++VAD L +
Sbjct: 140 KIVTEAVEIEKEFVCDSLPCALVGMNAGMMSDYIEYVADHLFTSL 184
>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 238
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 139/174 (79%), Gaps = 1/174 (0%)
Query: 124 MENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183
MENIHSE YSLL++ YIKD EK ++F AIE +P V +KA+WAL WI+ + F+ERL+ F
Sbjct: 1 MENIHSETYSLLIDNYIKDPAEKDKIFRAIETVPSVRKKAEWALSWINDDNCFSERLIAF 60
Query: 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-KRLHWQ 242
ACVEGI FSGSFCAI+WLKKRGLMPGLTFSNELISRDEGLH DFACLLY+++ RL +
Sbjct: 61 ACVEGILFSGSFCAIYWLKKRGLMPGLTFSNELISRDEGLHADFACLLYNMMHYTRLPDE 120
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+VH +V AV++E F+ E+LP +LIGMNS LM +YI+FVADRLLV + L+
Sbjct: 121 RVHEIVRGAVDVERVFISESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLY 174
>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 226
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
FYGFQIA+ENIHSEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF
Sbjct: 2 FYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSF 61
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236
R V FACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ +
Sbjct: 62 DTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYIN 121
Query: 237 KRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ + +V EAV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++
Sbjct: 122 NKC--TVIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIY 179
Query: 297 IIA 299
++
Sbjct: 180 NVS 182
>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
Length = 335
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 179/280 (63%), Gaps = 21/280 (7%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E E +LME +RF MFPI+Y ++W YKK +A+FWTAE+++L++DV+ WE L +
Sbjct: 2 KEGEKDEVLLMENKRRFVMFPIKYHEIWAAYKKVEAAFWTAEDMELAKDVKDWETLSAGQ 61
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K F + LA + +D IV +N+ +F ++Q PE ++FYGFQI MENI+ E+YS+L++
Sbjct: 62 KEFFGNYLAICSRTDNIVNKNIVEKFSAELQNPEGKSFYGFQIMMENIYDEIYSMLVDA- 120
Query: 140 IKDSKEKHRLFNAIENIPC---------VAQKAKWALDWIHSSDS-FAERLVGFACVEGI 189
LF +++NIP V K++WA W+ +S +AERLV A EGI
Sbjct: 121 ---------LFTSVDNIPLFKAVCQQEEVKAKSEWAHRWVFDDESLYAERLVASAAREGI 171
Query: 190 FFSGSFCAIFWL-KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
F SG+F A++WL K++G+MPG+ + I RD G + DFACLL++ L+ + + + + ++
Sbjct: 172 FMSGAFAALYWLTKEKGIMPGVAMATNHICRDRGFYADFACLLFAHLKTKPNPKIIEQII 231
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
EAVEIE ++P +GM+ + QYI+ VAD+LLV
Sbjct: 232 TEAVEIEKAHYRNSMPIEKLGMDLKEIDQYIESVADKLLV 271
>gi|356519286|ref|XP_003528304.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 186
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 136/174 (78%), Gaps = 1/174 (0%)
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L D E HFI+ VLAFFAAS+ IVLENL F +IQ+PEARAFYGFQ +ENIHSE+YSL
Sbjct: 6 LSDGEHHFITLVLAFFAASNDIVLENLVGHFTKEIQLPEARAFYGFQFGIENIHSEIYSL 65
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGS 194
LLET KDS EK+RLF I I + +K++WAL WI +S SF ERLV FAC+EGIFFSGS
Sbjct: 66 LLETXTKDSTEKNRLFRTINTILRITKKSQWALCWIDASKSFMERLVAFACIEGIFFSGS 125
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
+C IFWL+K LM GLTFSNELIS DEGLHCDFACLLYSLLRK+L + V V
Sbjct: 126 YCVIFWLEKCELM-GLTFSNELISXDEGLHCDFACLLYSLLRKKLSEECVREFV 178
>gi|393226483|gb|EJD34233.1| ribonucleotide reductase [Auricularia delicata TFB-10046 SS5]
Length = 316
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 178/277 (64%), Gaps = 2/277 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD-SEK 80
+ EP+L+ + R ++PI + ++W +YKKA + FW+ ++D + DVQHW+ L+ +E+
Sbjct: 10 DDTYEPVLLPTHYRLVLYPINFVELWVLYKKAVSFFWSVGDLDFNADVQHWDNKLNMNER 69
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HF+SH+LA A+S G++ EN+ RF ++QI EAR F G Q A++N H E SL+ +
Sbjct: 70 HFVSHILALIASSKGVIYENIVRRFACELQIAEARCFLGIQAAVQNTHLEAASLMAHILV 129
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIF 199
+D + +FNA++ PCV ++A W W+ + D F R+V A V G+FFSG+F ++F
Sbjct: 130 RDPIQHQYVFNALDGAPCVQRRAAWIARWLDNDDLPFRMRVVALAVVGGVFFSGAFASLF 189
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
WL++RGL+P + ISRDE LH +FAC L+ LR R VH ++ EAVE+E +
Sbjct: 190 WLEERGLLPAVAMLVRFISRDERLHSEFACALFDELRLRPCVHVVHRIIGEAVEVEKGLL 249
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
E+LP +L+G++ M QYI+ VADRLL + +L+
Sbjct: 250 TESLPVSLVGLDVKEMGQYIEHVADRLLQRLGYAALY 286
>gi|366987723|ref|XP_003673628.1| hypothetical protein NCAS_0A06890 [Naumovozyma castellii CBS 4309]
gi|342299491|emb|CCC67247.1| hypothetical protein NCAS_0A06890 [Naumovozyma castellii CBS 4309]
Length = 345
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 181/285 (63%), Gaps = 3/285 (1%)
Query: 15 REQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER 74
R +E E E +L+E RF MFPI+Y ++W YKK +A+FWTAEE++L +DVQ +++
Sbjct: 16 RRLAMKESEKDEILLIENAHRFVMFPIKYHEIWAAYKKVEAAFWTAEEIELEKDVQDFQK 75
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
L D +K F++ +LA S+ ++ +++ +F +Q PE ++FYGFQI MENI+ E+YS+
Sbjct: 76 LTDDQKQFLARLLALLTVSEDVINKHIIEKFSAQLQNPEGKSFYGFQIMMENIYDEVYSM 135
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSG 193
+++T+ + EK F + ++P +K + WI + DS +AERLV A EGIFFSG
Sbjct: 136 MVDTFF-NGPEKVPFFKEVPSLPEQKEKVDYINRWIKNQDSLYAERLVALAAKEGIFFSG 194
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
+ A+ WL + G PGLT +N+ I RD+G + DF CLL++ L+++ + + ++ EAVE
Sbjct: 195 VYAALGWLGQTGF-PGLTTANKSICRDKGAYSDFNCLLFAHLKQKPDAKIIEKIILEAVE 253
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
IE + L G++++L++QY++F AD LL +F +
Sbjct: 254 IEKNVLKNVLKVDKFGVDAALINQYVEFTADGLLSSFGNQKVFNV 298
>gi|365985840|ref|XP_003669752.1| hypothetical protein NDAI_0D01950 [Naumovozyma dairenensis CBS 421]
gi|343768521|emb|CCD24509.1| hypothetical protein NDAI_0D01950 [Naumovozyma dairenensis CBS 421]
Length = 352
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 174/278 (62%), Gaps = 20/278 (7%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E E +LME ++RF MFPI+Y ++W YKK +A+FWTAEE++L +DV+ + +L D +
Sbjct: 26 KETEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEAAFWTAEEIELEKDVKDFSKLNDDQ 85
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K FI+ VLA+ S+ I+ ++L +F ++Q PE ++ YGFQI MENI+ E+YS++++
Sbjct: 86 KEFIARVLAYLTVSEDIINKHLVEKFSAELQNPEGKSLYGFQIMMENIYDEVYSMIVDA- 144
Query: 140 IKDSKEKHRLFNAIENIPCVAQ---------KAKWALDWIHSSDS-FAERLVGFACVEGI 189
L+N EN+P Q KA + WIH+ DS + ERLV + EGI
Sbjct: 145 ---------LYNGPENVPYFKQVPSTVQHQEKAAFIQRWIHNPDSLYGERLVALSAKEGI 195
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVH 249
FFSG + A+ WL PG++ +N+ I RD+G + DF CLL++ L+ + + V ++
Sbjct: 196 FFSGVYAALGWLGNTAGFPGISTANKFICRDKGAYADFGCLLFAHLKTKPDAKIVEKIIT 255
Query: 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAV+IE + +A G++ +L+ QY++F+AD LL
Sbjct: 256 EAVDIELDVMNKAFEVEKFGVDPALIKQYVQFIADSLL 293
>gi|356532684|ref|XP_003534901.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain A-like [Glycine max]
Length = 248
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 168/295 (56%), Gaps = 83/295 (28%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSL EN + + E+E E QEPILMEQ+QRFCMFPI YKQ+WEMYKK +AS
Sbjct: 1 MGSL----ENNGAHKARDEKEHE-QEPILMEQSQRFCMFPICYKQIWEMYKKVEASL--- 52
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG- 119
W D N I++ YG
Sbjct: 53 -----------WTNCSD-----------------------------NSIEV------YGP 66
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAER 179
F +MYSLLLETYIKDS+EK++LFNAIE +PCVA+KA+WA WIH
Sbjct: 67 FFFGQCEPLFKMYSLLLETYIKDSREKYKLFNAIETLPCVAKKAEWAFSWIH-------- 118
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL------LYS 233
+FCAIFWLKK+GLMP LTF NELI RDEGL+CDFACL Y+
Sbjct: 119 --------------NFCAIFWLKKKGLMPVLTFLNELIFRDEGLYCDFACLSQCIVIAYN 164
Query: 234 LLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
LL+ L +VH +V +A+ I+T+FVC+ LPCALIGMNS+LMSQ+IK V LLV
Sbjct: 165 LLQNPLSSYEVHKLVPQAIXIQTKFVCDVLPCALIGMNSALMSQHIKVVVYMLLV 219
>gi|215275540|sp|P0C8I2.1|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 176/292 (60%), Gaps = 14/292 (4%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 284
>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 128/156 (82%), Gaps = 1/156 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L E +RF +FPI+Y+ +W+MYKKA+ASFWTAEEVDLS+D+QHWE L D E+ FIS
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIK+
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPS 120
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAER 179
E+ LFNAIE +PCV +KA WAL+WI + S+ ER
Sbjct: 121 EREYLFNAIETLPCVKKKADWALNWIGNQKASYGER 156
>gi|132618|sp|P26713.1|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 175/292 (59%), Gaps = 14/292 (4%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A + G + ++ QYI++ D L F++ C K I G FP
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYNVGNPFP 284
>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
OURT 88/3]
gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
Length = 334
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 176/294 (59%), Gaps = 14/294 (4%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 7 NMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFY 66
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D
Sbjct: 67 KQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDE 126
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ R+F+ IE P + + A+W W+ ++ ERLVGFA VEGI F F AI +LK
Sbjct: 127 KEQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLK 186
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCE 261
++ +MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+
Sbjct: 187 EQNIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINY 246
Query: 262 ALPCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 247 AFDKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 291
>gi|215275539|sp|P0C8I1.1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 178/296 (60%), Gaps = 22/296 (7%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E + RF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + S++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLL-----YSLLRKRLHWQKVHHMVHEAVEIETQFV 259
+MPGL NE ISRDEG+HC FAC L Y++ +R+ +H ++ EAVE+ +F+
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERI----IHKILKEAVELVDEFI 237
Query: 260 CEALPCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 284
>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
Benin 97/1]
Length = 327
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 175/292 (59%), Gaps = 14/292 (4%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ ++ ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 284
>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1172939|sp|P42492.1|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
Length = 334
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 176/294 (59%), Gaps = 14/294 (4%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 7 NMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFY 66
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D
Sbjct: 67 KQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDE 126
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ R+F+ IE P + + A+W W+ ++ ERLVGFA VEGI F F AI +LK
Sbjct: 127 KEQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLK 186
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCE 261
++ +MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+
Sbjct: 187 EQNIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINY 246
Query: 262 ALPCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 247 AFDKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 291
>gi|215275538|sp|P0C8I0.1|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 165/266 (62%), Gaps = 5/266 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRL 286
A + G + ++ QYI++ D L
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNL 267
>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
Length = 192
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/159 (66%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFF 191
SLL+ TYI+D KE+ LFNAIE +P V +KA WAL WI ++S FAERLV FA VEGIFF
Sbjct: 1 SLLINTYIRDLKERDYLFNAIETLPYVKRKADWALQWISDTNSTFAERLVAFAAVEGIFF 60
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
SGSF AIFWLKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L+K+ +V ++ +A
Sbjct: 61 SGSFAAIFWLKKRGLMPGLTYSNELISRDEGLHCNFACLIYSQLQKKPSADRVKDIITKA 120
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V IE +F+ EALP LIG+NS LM QYI+FVADRLL +
Sbjct: 121 VRIEQEFLTEALPVDLIGINSYLMKQYIEFVADRLLTDL 159
>gi|14970916|emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus
granularis]
Length = 141
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 119/141 (84%), Gaps = 1/141 (0%)
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENL RF ++QI EAR FYGFQIA+ENIHSEMYSLL++ YIKD+
Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQIAEARCFYGFQIAIENIHSEMYSLLIDAYIKDAV 60
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
++ LFNA+E +PCV +KA+WALDWI S S F R+V FA VEGIFFSGSF AIFWLKK
Sbjct: 61 QRDYLFNAVETMPCVTKKAQWALDWISSDSADFGTRIVAFAAVEGIFFSGSFAAIFWLKK 120
Query: 204 RGLMPGLTFSNELISRDEGLH 224
RGLMPGLTFSNELISRDEGLH
Sbjct: 121 RGLMPGLTFSNELISRDEGLH 141
>gi|255724184|ref|XP_002547021.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
gi|240134912|gb|EER34466.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
Length = 252
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 130/165 (78%), Gaps = 2/165 (1%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKH 81
E +EP+L E +R+ MFPI+Y ++W YKKA+ASFWT EEVDLS+D+ W +L D+E++
Sbjct: 87 EAEEPLLQENKRRYVMFPIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKLNDNERY 146
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F+S VLAFFAASDGIV ENL F ++Q PEA++FYGFQI MENIHSEMYSLL+ETY+K
Sbjct: 147 FVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVK 206
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFAC 185
D +E LFNAIENIPC+ +KA+WA+ WI D+ +AERLV F C
Sbjct: 207 DPQEADFLFNAIENIPCITKKAEWAIKWIQDKDALYAERLVAFCC 251
>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 247
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA 197
T+I+D++EK R+F AIE IP V KA+WAL WI+ + FAERLV +ACVEGI FSGSFCA
Sbjct: 39 TFIEDAQEKERIFEAIETIPSVQHKAEWALAWINDDNCFAERLVAYACVEGILFSGSFCA 98
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-KRLHWQKVHHMVHEAVEIET 256
+FWLKKRGLMPGLTFSNELISRDEGLH DF CLLY++L+ RL ++V +V AV +E
Sbjct: 99 LFWLKKRGLMPGLTFSNELISRDEGLHTDFGCLLYNMLKFTRLPEERVEDIVRSAVNVER 158
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+F+ +ALP LIGMN+ LM +YI+FVADRLLV + ++
Sbjct: 159 EFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIY 198
>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
hirsutus]
Length = 249
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 143/202 (70%), Gaps = 1/202 (0%)
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
IV +NL RF ++Q+PEARAF+GFQI+ IHSEMYS+L+E+ IKD+ EK+ +FN IE
Sbjct: 1 IVNDNLVKRFSQEVQVPEARAFFGFQISNAGIHSEMYSVLIESLIKDANEKNLIFNTIET 60
Query: 156 IPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 214
+PCV +K W L I +F ++V FA VEGIFF+G AIFWL+++G+MPGLT SN
Sbjct: 61 VPCVKKKKDWVLRRIADDRVTFPLKVVAFATVEGIFFAGGAAAIFWLQEKGVMPGLTLSN 120
Query: 215 ELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSL 274
ELI + E L+ DFACLL+ L +R +++ ++ EAV IE +F + LP +LIGM+ L
Sbjct: 121 ELIRKGESLYTDFACLLFKRLVQRPSVEEITEIIREAVIIEQEFSTKGLPVSLIGMDCEL 180
Query: 275 MSQYIKFVADRLLVHIHQCSLF 296
M+ YI+FVADRLL ++ +F
Sbjct: 181 MTTYIEFVADRLLQALNCPKVF 202
>gi|225434341|ref|XP_002276454.1| PREDICTED: uncharacterized protein LOC100256951 [Vitis vinifera]
Length = 841
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 109/117 (93%)
Query: 172 SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL 231
SS FAERL+ FACVEGIFFSGSFCAIFWLKK+GLMPGLTFSNELISR EGLHCDFACLL
Sbjct: 666 SSTLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLL 725
Query: 232 YSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
YSLL+K+L WQKVHH+VHEA+EIETQF+CEALPCALIGM ++LMS YIKFV DRLLV
Sbjct: 726 YSLLQKQLPWQKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLV 782
>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
Length = 351
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 175/272 (64%), Gaps = 4/272 (1%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ERLLD 77
+E + E IL E +RF +FPI+Y ++++ YKK +A FWTAEE+D S+D+Q+W +++
Sbjct: 20 KELQKDESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITK 79
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
EK + +LA FA++D + ENL + Q PEA+ FYGFQI ++NIH E+Y +L++
Sbjct: 80 DEKEYFIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILID 138
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFC 196
+ +KD +++ +F I+++ + +K ++A W + D+ F E+L+ A V GIF ++
Sbjct: 139 SLVKDDEKRTSMFEEIKDLTNIKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYV 198
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
++ +K GL+PG + + RD GLH DF CL+Y+ L+ ++ + V ++ +AVEIE
Sbjct: 199 SVLSFQKGGLIPGFVTGVDNMLRDRGLHVDFCCLMYAHLKNQIDSEIVQKIIVDAVEIEK 258
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ + +ALP + + M+Q+I++VAD +LV
Sbjct: 259 KSLLKALPIIKVNLKIDEMNQFIEYVADSILV 290
>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 121/155 (78%), Gaps = 4/155 (2%)
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDW----IHSSDSFAERLVGFACVEGIFFSG 193
TYI + + L+ + I C + + SS FAERL+ FACVEGIFFSG
Sbjct: 56 TYIGKLRYVYMLYEVVHGIYCFNFILFFLFLIVVIPLCSSTLFAERLIAFACVEGIFFSG 115
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
SFCAIFWLKK+GLMPGLTFSNELISR EGLHCDFACLLYSLL+K+L WQKVHH+VHEA+E
Sbjct: 116 SFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLYSLLQKQLPWQKVHHIVHEAME 175
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
IETQF+CEALPCALIGM ++LMS YIKFV DRLLV
Sbjct: 176 IETQFICEALPCALIGMKATLMSHYIKFVVDRLLV 210
>gi|403217182|emb|CCK71677.1| hypothetical protein KNAG_0H02620 [Kazachstania naganishii CBS
8797]
Length = 346
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 174/286 (60%), Gaps = 4/286 (1%)
Query: 17 QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ER 74
+ E E E +L+E +RF MFPI+Y ++W YKKA+ASFWTAEE++LS+DV+ ++
Sbjct: 15 EATHETEKDEILLIENKRRFVMFPIKYHEIWAAYKKAEASFWTAEEIELSKDVEDIADKK 74
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
+ + F+ +A + IV +L RF ++Q PE ++FYGFQI MENI+ E+YS+
Sbjct: 75 VTAEQLAFLKKFMALLTLGEDIVNRHLIERFSAELQNPEGKSFYGFQIMMENIYDEVYSM 134
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSG 193
+++ Y + E + + I+N AQK + WI +S + ERLV FA EGIF SG
Sbjct: 135 VIDAYF-NGPENIKCYEEIKNCSHFAQKTDFINRWIKDPESLYGERLVAFAAKEGIFLSG 193
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVE 253
+ A+F L ++GL+ GL +N I RD+G + DF+CLL++ L+K+ + + ++ EAV+
Sbjct: 194 AHAAVFALGEKGLLAGLNKANTNIYRDKGSYTDFSCLLFAHLKKKPEPKVIEKIITEAVD 253
Query: 254 IETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
IE + + G++ + QY++++AD LL+ ++ ++
Sbjct: 254 IEKDVLVNGMNVKEAGVDEAQTIQYVEYLADSLLLSFGNEKVYNVS 299
>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
[Arabidopsis thaliana]
Length = 243
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 120/155 (77%)
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF 195
T I + ++ +F V +KA+WA+ WI+ S SFAER+V FACVEGIFFSGSF
Sbjct: 28 FSTRISKTTKREIIFFVQSKPFLVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSF 87
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
C+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR + ++ +V +AVEIE
Sbjct: 88 CSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKFDEDRLKAIVCDAVEIE 147
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+FVC+AL CAL+GMN LMSQYI+FVADRLL +
Sbjct: 148 REFVCDALSCALVGMNRELMSQYIEFVADRLLAAL 182
>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 211
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 125/169 (73%), Gaps = 2/169 (1%)
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIF 190
MYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V FACVEGIF
Sbjct: 1 MYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIF 60
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHE 250
FSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + + + +V E
Sbjct: 61 FSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKC--TVIEDIVRE 118
Query: 251 AVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
AV IE +F+ E+LP +LIGMN LM QYI+FVADRLL + + ++ ++
Sbjct: 119 AVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS 167
>gi|355717371|gb|AES05911.1| ribonucleotide reductase M2 B [Mustela putorius furo]
Length = 150
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 120/145 (82%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ D+EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 6 KSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKY 65
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 66 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 125
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWA 166
D K++ LFNAIE +P V +KA WA
Sbjct: 126 DPKKREFLFNAIETMPYVKKKADWA 150
>gi|323304329|gb|EGA58102.1| Rnr2p [Saccharomyces cerevisiae FostersB]
Length = 229
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
YIKD KE LFNAI IP + +KA+WAL WI +D+F
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADAF 227
>gi|410078754|ref|XP_003956958.1| hypothetical protein KAFR_0D01760 [Kazachstania africana CBS 2517]
gi|372463543|emb|CCF57823.1| hypothetical protein KAFR_0D01760 [Kazachstania africana CBS 2517]
Length = 346
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 163/270 (60%), Gaps = 2/270 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E E +L+E +RF MFPI+Y ++W YKK +A+FW AEEVDL++DV +++L + +
Sbjct: 20 REAEKDEILLIENKRRFVMFPIKYHEIWAAYKKLEATFWPAEEVDLTKDVDDFKKLNEDQ 79
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
K F + LA + ++ +L RF ++Q PE ++FYGFQI +N++ E +S++++T+
Sbjct: 80 KDFFARYLAAATTGEANLVNHLIERFSAELQNPEGKSFYGFQIMAQNVYDEAHSMMIDTF 139
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
D EK + N V K + +WI S +S + ERLV A E +F +G+ I
Sbjct: 140 F-DGAEKVKYLNEFPTSKEVTAKLNFRKEWIESPESLYGERLVALAAKEALFLAGARAVI 198
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FW +GL G+T I+RD G + DF CLL++ L+ + + + V ++ +A EIE +
Sbjct: 199 FWFISQGLFHGVTHGISNITRDRGFYSDFNCLLFAHLKNKPNAKVVEKIIVDATEIEKNY 258
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ + L G+ S+ ++QY++F+AD LL
Sbjct: 259 MADLLKVEQSGLKSAQVNQYVEFLADSLLA 288
>gi|367002223|ref|XP_003685846.1| hypothetical protein TPHA_0E03220 [Tetrapisispora phaffii CBS 4417]
gi|357524145|emb|CCE63412.1| hypothetical protein TPHA_0E03220 [Tetrapisispora phaffii CBS 4417]
Length = 352
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 172/272 (63%), Gaps = 4/272 (1%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ERLLD 77
+E + E IL+E ++RF +FPI+Y +V++ YK+ +A FWTAEE+D ++D++++ E + +
Sbjct: 19 KESQKDEVILIENHRRFVLFPIKYHEVYDAYKQREALFWTAEELDFTKDIENFNGEEISE 78
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
EK +I+ +LA FA++D L NL ++QIPEA+ FYGFQI ++NIH E+YSL+++
Sbjct: 79 DEKEYITRLLALFASNDMDKL-NLTENLSAEVQIPEAKCFYGFQIMLDNIHQEVYSLIID 137
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFC 196
IKD+ ++ +F+ ++ + + K ++A W + D F E+L+ FA V+GIF ++
Sbjct: 138 AIIKDNGKRVSMFDDLKKLSNINDKLEYAKTWFENEDHLFGEKLIAFAAVQGIFSLAAYA 197
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
+IF K L PGL + + RD LH DF L+Y+ L+ + V+ ++ +AV+IE
Sbjct: 198 SIFSPKGGKLFPGLQKGVQNMFRDRALHTDFQSLMYAHLKHDVDPVVVNRIITDAVKIEK 257
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ + LP G+ + M Q I+ VAD LLV
Sbjct: 258 ASLKDTLPIEKFGLKIAEMEQLIEHVADFLLV 289
>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
echinatior]
Length = 210
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Query: 149 LFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LFNAIE +PCV +KA WAL+WI H S +F ER+V FA VEGIFFSGSF AIFWLKKRG+M
Sbjct: 10 LFNAIETLPCVRKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKRGVM 69
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCAL 267
PGLTFSNELISRDEGLHCDFACL++ + ++ +++V +V +AVEIE +F+ +ALP L
Sbjct: 70 PGLTFSNELISRDEGLHCDFACLMFKHIVQKPSFERVKSIVMDAVEIEKEFLTQALPVEL 129
Query: 268 IGMNSSLMSQYIKFVADRLLVHI 290
IGMN + M YI+FVADRL V +
Sbjct: 130 IGMNRTFMCNYIEFVADRLFVAL 152
>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
Length = 219
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K LFNAI+N+PCV +KA WAL+WI S + F ER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 20 KRYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGSFASIFWLKKR 79
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLH DFACL++ L ++ ++V ++ EAV IE +F+ +ALP
Sbjct: 80 GLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFLTKALP 139
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
L+GMN LMSQYI+FVADRLL+ +
Sbjct: 140 VDLLGMNCELMSQYIEFVADRLLLEL 165
>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
Length = 1292
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
Query: 61 EEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG 119
E++ L DV+ W+ +L D+E++ IS++L FF + GI+ EN+ F++++QIPEAR FY
Sbjct: 56 EDLFLLNDVRDWQCKLDDNERYLISNILGFFVSIAGIINENIITHFMSEVQIPEARTFYS 115
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAER 179
QIAMENI SE YSLL++ YIKD+ EK ++FNAIE+IPCV +K +W L +++S S AER
Sbjct: 116 MQIAMENIQSEKYSLLIDAYIKDTDEKSKIFNAIESIPCVKRKCEWLLKSMNNSKSLAER 175
Query: 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL 239
L+ FA VE I +S SFC I W KR LMP L+ I +E HC+F LLYS L +L
Sbjct: 176 LIAFAAVESILYSASFCVILWFHKRSLMPKLSEYYSFIVSNEYTHCEFGRLLYSKLINKL 235
Query: 240 HWQKVHHMVHEAVEIETQFV 259
+ + ++ +AV+ E Q +
Sbjct: 236 DTEMIESIIRDAVDCEKQIM 255
>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 176/295 (59%), Gaps = 17/295 (5%)
Query: 6 NETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQA-SFWTAEEVD 64
NE +++ Q E+ E+ IL E RF +FPI+Y ++WE+YKK A S W+ E+ D
Sbjct: 2 NELHSQLKQLEKSEE-------ILSENPHRFTLFPIQYPKLWEIYKKRLASSIWSVEQFD 54
Query: 65 --LSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQI 122
+ D+ + +S+ FI +LAF A + NL F DIQI EA+ F+GF++
Sbjct: 55 QIIRNDISKLSEICNSDHSFIKIILAFLVA-NCKQKTNLWGAF-KDIQILEAKHFHGFRL 112
Query: 123 AMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182
AM+NIH EMY L E +++ E+ L + I +K+++ W++S + F+ERL+G
Sbjct: 113 AMKNIHYEMYCNLFEILTEET-ERSELIEKM--INSTMKKSQYTKKWLNSDNLFSERLIG 169
Query: 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-KRLHW 241
C+E IF S SF +IFWLKKRGLM LT SN+LI RDE H +F LYS L+ +L
Sbjct: 170 LVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIFRDEEFHSNFLYSLYSNLKHSKLPQ 229
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
VH +V EAV+IE +F+ +LP LI ++ + M QY++ V+D +L+ LF
Sbjct: 230 TLVHSLVKEAVDIEKEFIT-SLPTELIELDRNSMYQYVEVVSDNILISFGYEKLF 283
>gi|444322762|ref|XP_004182022.1| hypothetical protein TBLA_0H02170 [Tetrapisispora blattae CBS 6284]
gi|387515068|emb|CCH62503.1| hypothetical protein TBLA_0H02170 [Tetrapisispora blattae CBS 6284]
Length = 352
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 163/271 (60%), Gaps = 4/271 (1%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER---LL 76
+E E E IL E +RF +FPI+Y +V++ YKK +A+FWTAEE+D S+D++ W +
Sbjct: 19 KEMEKDEAILFENKRRFVLFPIKYHEVYDAYKKREANFWTAEEMDSSKDIEQWNSEGAIT 78
Query: 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+K FI+ +LA F + D + +NL ++QIPEA+ FYGFQI ++NIH+E+YSL +
Sbjct: 79 KDQKEFITRLLAVFMSQD-FIDQNLTELLSAEVQIPEAKCFYGFQIMVDNIHAEVYSLAI 137
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFC 196
+ IKD K + +F +IE+ + K + W +AE+LV FA ++G+F +
Sbjct: 138 DALIKDEKTRVTMFESIEDNSNIKAKMAYNETWFGEDSLYAEKLVAFAALQGLFNLTGYV 197
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
+ F+L+ + ++PG N + +D +H DF L+++ L+ + + + + +V EAVE+E
Sbjct: 198 SAFYLQSKDILPGFNKMNVEMFKDHTMHTDFQALMFAHLKNKPNAKIIERIVTEAVELEK 257
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ + IG++ M +I+ VAD +L
Sbjct: 258 KAYDDLFLVEKIGLSKKDMDLFIEVVADTIL 288
>gi|359496795|ref|XP_003635337.1| PREDICTED: uncharacterized protein LOC100267871 [Vitis vinifera]
Length = 668
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
Query: 172 SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL 231
SS FAERL+ FACVE IFF GSFC IFW KKRGLMPGLTFSNELISRDEGLHCDFACLL
Sbjct: 494 SSTLFAERLITFACVERIFFLGSFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLL 552
Query: 232 YSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
Y LL+ L ++VHH+VHEAVEIETQFVCEAL CALIGMN++LMSQYIKFVAD LLV I
Sbjct: 553 YKLLKNSLTLERVHHIVHEAVEIETQFVCEALLCALIGMNATLMSQYIKFVADHLLVAI 611
>gi|380863084|gb|AFF18835.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
Length = 158
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/100 (92%), Positives = 98/100 (98%)
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHE 250
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L WQKVHH++HE
Sbjct: 1 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHIIHE 60
Query: 251 AVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
AVEIET+FVCEALPCALIGMNSSLMSQYIKFVADRLLV +
Sbjct: 61 AVEIETEFVCEALPCALIGMNSSLMSQYIKFVADRLLVSL 100
>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
Length = 181
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
F +LAFFA SDGIV ENL RF + EAR FY FQ AMENIH+E+YS L++T I
Sbjct: 2 FFKCILAFFAPSDGIVGENLVTRFYEMVVYTEARYFYAFQAAMENIHAEVYSQLIKTLIP 61
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFW 200
+ E+ +F++ P + +K +WA W+ + SF ERLV FA VEG+ FSGSF +IFW
Sbjct: 62 NEDEQRSIFSSFMTTPGITEKTRWAKQWLERENLSFVERLVAFAVVEGLLFSGSFASIFW 121
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRKRLHWQKVHHMVHEAVEIETQF 258
LKKRGLM GLTFSNELISRDEGLHCDFACLLY+ + +L ++++V EAV E+ F
Sbjct: 122 LKKRGLMHGLTFSNELISRDEGLHCDFACLLYTKHIVHKLPNNVIYNIVREAVHAESIF 180
>gi|410927806|ref|XP_003977331.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like,
partial [Takifugu rubripes]
Length = 179
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 112/137 (81%), Gaps = 3/137 (2%)
Query: 14 QREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE 73
+R GE+E E P+L E +RF +FPI+Y+ +W+MYKKA+ASFWTAEEVDLS+D+QHWE
Sbjct: 38 KRRTGEKEVE---PLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWE 94
Query: 74 RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133
L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYS
Sbjct: 95 SLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYS 154
Query: 134 LLLETYIKDSKEKHRLF 150
LL++TYIKD E+ +F
Sbjct: 155 LLIDTYIKDPSERWGIF 171
>gi|367007080|ref|XP_003688270.1| hypothetical protein TPHA_0N00550 [Tetrapisispora phaffii CBS 4417]
gi|357526578|emb|CCE65836.1| hypothetical protein TPHA_0N00550 [Tetrapisispora phaffii CBS 4417]
Length = 360
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 174/273 (63%), Gaps = 10/273 (3%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSE 79
E++ E IL E +RF +FPIR+ ++++ YKK +A FWTAEE+DL QD WE +L D E
Sbjct: 34 ERQKDETILFENKRRFVLFPIRFHEIFDAYKKREALFWTAEEIDLKQDCVDWEDKLGDKE 93
Query: 80 KHFISHVLAFFAA---SDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
KH + VLA FAA S+ + E L+A ++Q PEA+ FYGFQI ++N+H E+YSL++
Sbjct: 94 KHSMKRVLAVFAASVLSELKLTETLSA----EVQTPEAKCFYGFQIMVDNVHEEVYSLVI 149
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
++++ + E +F+ IE +K +A W S++ F E+LV FA ++ +F S+
Sbjct: 150 DSFVTNKDELEVMFDGIEEDEISQEKIAFAKRWFDVSNALFGEKLVAFAAIQSLFSLNSY 209
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
++F ++KR L+PGL+ +N + +D + +F L+++ L+ +++ + V +V EAV IE
Sbjct: 210 ASLFSMQKRRLLPGLSKANVTMFKDHSIRTEFQFLMFNHLKNKINKEIVQRIVIEAVNIE 269
Query: 256 TQFVCE-ALPCALIGMNSSLMSQYIKFVADRLL 287
+ + + ++ +G++ LM + I++VAD +L
Sbjct: 270 KRALRKNSMSFKQLGLDIKLMEELIEYVADIIL 302
>gi|148700272|gb|EDL32219.1| mCG1034315 [Mus musculus]
Length = 213
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 114/142 (80%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W MYK+A+ASFWT EEVDLS+++ HW +L EK+
Sbjct: 71 RSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQARASFWTGEEVDLSKNLPHWNKLKSDEKY 130
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PE FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 131 FISHILAFFAASDGIVNENLVERFSQEVQVPETHCFYGFQILIENVHSEMYSLLIDTYIR 190
Query: 142 DSKEKHRLFNAIENIPCVAQKA 163
D K++ LFNAIE +P V +KA
Sbjct: 191 DPKKREFLFNAIETMPYVKKKA 212
>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 205
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 112/151 (74%), Gaps = 2/151 (1%)
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMP 208
LFNAIENIP + +KA WA WI S SF R V FACVEGIFFSGSF AIFWLKKRGLMP
Sbjct: 13 LFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMP 72
Query: 209 GLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALI 268
GLTFSNELISRDEGLH DFACLL+ + + + +V EAV IE +F+ E+LP +LI
Sbjct: 73 GLTFSNELISRDEGLHTDFACLLHKYINNKC--TVIEDIVREAVAIEQEFLSESLPVSLI 130
Query: 269 GMNSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
GMN LM QYI+FVADRLL + + ++ ++
Sbjct: 131 GMNCKLMCQYIEFVADRLLFALGEKKIYNVS 161
>gi|269865675|ref|XP_002652006.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063328|gb|EED42049.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 183
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE YK +++FWT EEVD++ D
Sbjct: 10 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFD 68
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 69 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 128
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S SF R V
Sbjct: 129 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVA 182
>gi|426334717|ref|XP_004028887.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Gorilla
gorilla gorilla]
Length = 315
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 103/123 (83%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEK 146
KE+
Sbjct: 188 KER 190
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFACL++ L + ++V ++ AV IE +F+ EALP LIGMN +LM QYI+F
Sbjct: 193 GLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEF 252
Query: 282 VADRLLVHIHQCSLFII 298
VADRL++ + +F +
Sbjct: 253 VADRLMLELGFSKVFRV 269
>gi|66802406|ref|XP_629985.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
gi|60463390|gb|EAL61578.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
Length = 257
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 125/175 (71%), Gaps = 4/175 (2%)
Query: 45 QVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFISHVLAFFAASDGIVLENLAA 103
+W+MYKK A+ W EE++ S D WE+ L + E+ F S+VLAFF AS GI+ +NL
Sbjct: 86 DIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNLN- 144
Query: 104 RFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKA 163
RF++ +QIPEA+ FY +QI ++ +HSE YSLL+ET IKD K +LFNAIE IPCV +KA
Sbjct: 145 RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKA 204
Query: 164 KWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 218
+WAL WI+ +SF +RLV E IFFSGSF I LKKR LM GLTFSNELI+
Sbjct: 205 EWALKWIN--ESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
>gi|440796690|gb|ELR17799.1| ribonucleosidediphosphate reductase, beta subunit [Acanthamoeba
castellanii str. Neff]
Length = 171
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 110/142 (77%), Gaps = 3/142 (2%)
Query: 131 MYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS--DSFAERLVGFACVEG 188
MYSLL++TY+KD+ EK LFNA + IP + +KA WAL WI + ++F +RLVGFA VEG
Sbjct: 1 MYSLLIDTYVKDTAEKAHLFNAAQTIPSIKKKADWALKWIATEGVETFGQRLVGFAAVEG 60
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
IFFS S C+IFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS+L + ++
Sbjct: 61 IFFSSS-CSIFWLKKRGLMPGLAFSNELISRDEGLHCDFACLLYSMLVNKPSDDVTRQII 119
Query: 249 HEAVEIETQFVCEALPCALIGM 270
EAVE+E +FV E+LP ALIGM
Sbjct: 120 LEAVEMEKEFVTESLPVALIGM 141
>gi|269867180|ref|XP_002652512.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062330|gb|EED41544.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 196
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
EN NQ Q E+ EP+L E +R+ +FPI+Y ++WE YK +++FWT EEVD++ D
Sbjct: 10 ENRRNQI-QDSVEKPGYEPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFD 68
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
+H+ L +E+ FI +VLAFFAASDGIV ENL RF +++QI EA+ FYGFQIA+ENIH
Sbjct: 69 CEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIH 128
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS 175
SEMYS L+ET I+D +E+ LFNAIENIP + +KA WA WI S S
Sbjct: 129 SEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTS 175
>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
Length = 139
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAI 198
IKD KE+ LFNA+E +PCV +KA WAL+WI + D+ F ER+V FA VEGIFFSGSF +I
Sbjct: 1 IKDPKEREFLFNAVETLPCVKKKADWALNWIGNKDAQFGERVVAFAAVEGIFFSGSFASI 60
Query: 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + V ++ AV+IE +F
Sbjct: 61 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEATVKSIIVNAVQIEQEF 120
Query: 259 VCEALPCALIGMNSSLMSQ 277
+ +ALP LIGMN LM Q
Sbjct: 121 LTQALPVKLIGMNCDLMKQ 139
>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 361
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 163/274 (59%), Gaps = 8/274 (2%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDS 78
+E + +EPILME RF + PI++ V++ YKK +A FW AEE+D S D+ +W ++ D
Sbjct: 34 EESQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKKASDH 93
Query: 79 EKHFISHVLAFFAASDGIVLEN--LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+K I LAF +S VL + L +++QIPEA+ FYGF+I +ENIH E+YSL +
Sbjct: 94 DKSIIKKSLAFLCSS---VLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSLAI 150
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+ + ++ E ++F ++N + +K +A W S FAE+LV F+ +E IF SF
Sbjct: 151 DQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESSLFAEKLVAFSSIEAIFSLVSF 210
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+I L+K+ ++PGL +LI +D +HCDF +YS L+KRL + +V EAVEIE
Sbjct: 211 FSIMSLEKKDIIPGLISGIKLILKDHIVHCDFQMSIYSELKKRLDPGIIERIVTEAVEIE 270
Query: 256 TQFV-CEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ + + L + + I++V DR+L+
Sbjct: 271 LETLEDDYFNKQLDKETKADIKNVIEYVGDRVLM 304
>gi|452819014|gb|EME26126.1| ribonucleotide reductase small subunit [Galdieria sulphuraria]
Length = 313
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 163/257 (63%), Gaps = 7/257 (2%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAAS 93
+R+ +FPI + + YK+ +AS WT+ E+D S+D++ +E+L ++ + +VLAFFA+
Sbjct: 4 KRYSLFPIVDELSYSFYKRQEASIWTSAEMDFSRDLEDFEKLDVEVRNILMNVLAFFASG 63
Query: 94 DGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAI 153
DGIV +N++ RF+ E AFY Q+ +E +H+E YSL++ + I+D++E+++LF+A
Sbjct: 64 DGIVSKNISYRFMRSAPNFEQVAFYAAQLFIETVHAETYSLIISSLIRDTEERNKLFSAG 123
Query: 154 ENIPCVAQKAKWALDWIHSSDSFA--ERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLT 211
EN V K KW +I D+ ER++ FAC EGIFF+G+F IFW+ + M L
Sbjct: 124 ENNLAVRSKEKWMERFIE-DDTVEEWERILAFACSEGIFFTGAFAVIFWIGEMRSMQNLI 182
Query: 212 FSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALI--G 269
F+N IS+DE LHC+FA + LL+ + + ++ EA E+E +F+ +P + G
Sbjct: 183 FANIQISKDEALHCEFA--VARLLQMDWNEDRALEIIREAAELEKEFMKAIIPDKELCYG 240
Query: 270 MNSSLMSQYIKFVADRL 286
M+ S M YI+++A+RL
Sbjct: 241 MSQSKMLSYIEWMANRL 257
>gi|357391820|ref|YP_004906661.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
Length = 339
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 20/288 (6%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
ED++ +L++ + P+RY ++ Y+ A + WT EEVDL DV +L + E+H
Sbjct: 4 EDRKKMLLDPGFELTLRPMRYPSFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSEGERHM 63
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I ++AFFA D IV N+ I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 64 IGRLVAFFATGDSIVSNNVVLSLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPD 123
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSD------------SFAERLVGF-ACVEGI 189
++++ F A+ENIP +AQKA++ ++++ D +F L+ F ACVEG+
Sbjct: 124 PEDRNAAFAAVENIPSIAQKAQFCFKYMNAVDHIDSLRSKEDRRAFLLNLICFAACVEGL 183
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQ 242
FF G+F ++W + RGL+ GL + RDE +H DFA + +R+ +
Sbjct: 184 FFYGAFAYVYWFRSRGLLHGLATGTNWVFRDESMHMDFAFSVVDTVREEEPDLFDDKMAR 243
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+V M+ EAVE E QF + L GMN+ M +Y++ VAD+ L +
Sbjct: 244 QVTEMLEEAVEAELQFARDLCGEGLPGMNTESMREYLQAVADQRLARL 291
>gi|386839868|ref|YP_006244926.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374100169|gb|AEY89053.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451793162|gb|AGF63211.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 337
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 149/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 8 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEQHLIGRLVA 67
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 68 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 127
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ WI+ DS A+R L+ F AC+EG+FF G+F
Sbjct: 128 AFAAVENIPSIREKAEFCFKWINEVEKIDRLDSKADRRRFLLNLICFAACIEGLFFYGAF 187
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK Q+V M+
Sbjct: 188 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLQQQVTDML 247
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
HEAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 248 HEAVEAELQFAHDLCGDGLPGMNTDSMRQYLQCVADQRLTRL 289
>gi|386842422|ref|YP_006247480.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374102723|gb|AEY91607.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451795715|gb|AGF65764.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 337
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 149/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 8 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEQHLIGRLVA 67
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 68 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 127
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ WI+ D+ A+R L+ F AC+EG+FF G+F
Sbjct: 128 AFAAVENIPSIREKAEFCFKWINEVEKIDRLDTKADRRRFLLNLICFAACIEGLFFYGAF 187
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK Q+V M+
Sbjct: 188 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLQQQVTDML 247
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
HEAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 248 HEAVEAELQFAHDLCGDGLPGMNTDSMRQYLQCVADQRLTRL 289
>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
Length = 340
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 153/283 (54%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAKLSPAEQHLIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 71 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPQDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F+A+ENIP + +KA++ WI+ +S A+R L+ F AC+EG+FF G+F
Sbjct: 131 AFDAVENIPSIREKAEFCFRWINEVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK RL Q+V M
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQ-QQVTDM 249
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 250 LAEAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRL 292
>gi|429196106|ref|ZP_19188092.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
ipomoeae 91-03]
gi|428668184|gb|EKX67221.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
ipomoeae 91-03]
Length = 340
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 71 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S A+R L+ F AC+EG+FF G+F
Sbjct: 131 AFAAVENIPSIREKAQFCFTWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK RL Q+V M
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDRLQ-QQVTDM 249
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 250 LREAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRL 292
>gi|408529356|emb|CCK27530.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
davawensis JCM 4913]
Length = 337
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 8 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVA 67
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 68 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 127
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F+A+ENIP + +KA + WI+ +S A+R L+ F AC+EG+FF G+F
Sbjct: 128 AFDAVENIPSIREKAGFCFKWINEVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAF 187
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK RL Q+V M
Sbjct: 188 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQ-QQVTDM 246
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 247 LREAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLSRL 289
>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum So ce56]
gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum So ce56]
Length = 339
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 153/282 (54%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ Q + P+ Y +EMY+ A + WT EEVD S DV ++ D+E+H + ++A
Sbjct: 10 LLDPGQCLTLRPMAYPAFFEMYRSAIKNTWTVEEVDFSTDVGDLRKMTDAERHLVQRLVA 69
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TYI D +++HR
Sbjct: 70 FFATGDSIVANNLVLNLYRHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPEDRHR 129
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + QKA + + W+ S +S AER L+ F ACVEG+FF G+F
Sbjct: 130 AFAAVENIPSIRQKADFCMRWLDSVESLGRLDTRAERRRFLLNLICFAACVEGLFFFGAF 189
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
+++L+ RGL+ GL + RDE H FA + S R+ + + M+
Sbjct: 190 AYVYFLRSRGLLHGLAAGTSWVFRDESAHMRFAFEVVSTARREEPELFDAGLARSILDMM 249
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EA+ E +F + L + GM++ + +Y++F AD+ L +
Sbjct: 250 DEAIACEARFAEDLLGAGVAGMSARDVRRYLEFCADQRLATL 291
>gi|443624323|ref|ZP_21108797.1| putative Ribonucleoside-diphosphate reductase, beta subunit
[Streptomyces viridochromogenes Tue57]
gi|443342237|gb|ELS56405.1| putative Ribonucleoside-diphosphate reductase, beta subunit
[Streptomyces viridochromogenes Tue57]
Length = 337
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 8 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVA 67
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 68 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 127
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S A+R L+ F AC+EG+FF G+F
Sbjct: 128 AFAAVENIPSIREKAEFCFKWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAF 187
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK Q+V M+
Sbjct: 188 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLQQQVTDML 247
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 248 REAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRL 289
>gi|432884081|ref|XP_004074433.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Oryzias latipes]
Length = 279
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEK 80
E ED EP+L E +RF +FPI+Y +W+MYK+AQASFWT EEVDLS+D+ HW+RL EK
Sbjct: 31 ETED-EPLLRENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDRLKPDEK 89
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
HFIS+VLAFFAASDGIV ENL RF ++Q+PEAR+FY FQI +E +HSEMYSLL+ TYI
Sbjct: 90 HFISNVLAFFAASDGIVNENLVQRFSLEVQVPEARSFYSFQILIETVHSEMYSLLINTYI 149
Query: 141 KDSKEKHRL 149
+D KE+ L
Sbjct: 150 RDLKERSGL 158
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
T+ +L R GLHC+FACLLYS L K+ +V ++ +AV IE +F+ EALP LIGM
Sbjct: 147 TYIRDLKER-SGLHCNFACLLYSYLVKKPSEDRVRGIITKAVCIEQEFLTEALPVDLIGM 205
Query: 271 NSSLMSQYIKFV 282
N LM QYI+FV
Sbjct: 206 NCCLMKQYIEFV 217
>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 331
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 22/285 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY + +E Y+ A + WT EEVDL+ D+ R+ E+H I+ ++
Sbjct: 1 MLLDPGMDLTLRPMRYPEFYERYRAAIRNTWTVEEVDLNSDLADLARMTPEERHLINRLV 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 AFFATGDSIVANNLVLNLYQHVNAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDHDERV 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
+ F A+E+IP + KA++ WI S +F L+ F AC+EG+FF G+
Sbjct: 121 KAFAAVEHIPSIRNKAEFCFRWIDSLGGLDRLESREDRRAFLLNLICFAACIEGLFFYGA 180
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR--------KRLHWQKVHH 246
F ++W + RGL+ GL + RDE +H +FA + +R +L Q V
Sbjct: 181 FAYVYWFRSRGLLSGLATGTNWVFRDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQ-VTQ 239
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIH 291
M+ EAVE E F + + GMN M QY+++VAD+ LV +
Sbjct: 240 MIEEAVEAELAFAADLCGDGMSGMNVEQMRQYLEYVADQRLVRLR 284
>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
Length = 340
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 71 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + A+R L+ F AC+EG+FF G+F
Sbjct: 131 AFAAVENIPSIREKAEFCFTWMDSVEKLDRLQTQADRRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK RL Q+V M
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLG-QQVTDM 249
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 250 LREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRL 292
>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces jumonjinensis]
Length = 322
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 10 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAKLTPGEQHLIGRLVA 69
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 70 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTA 129
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 130 AFAAVENIPSIREKAQFCFKWMDSVEKIDQLETQADRRRFLLNLICFAACIEGLFFYGAF 189
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 190 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDML 249
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M +Y++ VAD+ L +
Sbjct: 250 QEAVEAELQFGSDLCGDGLPGMNTESMREYLQCVADQRLTRL 291
>gi|456388970|gb|EMF54410.1| nrdM protein [Streptomyces bottropensis ATCC 25435]
Length = 337
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L + E+H I ++A
Sbjct: 8 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSEGEQHMIGRLVA 67
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 68 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRVA 127
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S A+R L+ F AC+EG+FF G+F
Sbjct: 128 AFAAVENIPSIREKAEFCFKWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAF 187
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK L Q+V M+
Sbjct: 188 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPDLFDDLLQQQVTDML 247
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 248 KEAVEAELQFGRDLCGDGLPGMNTESMRQYLECVADQRLTRL 289
>gi|345848582|ref|ZP_08801602.1| Ribonucleoside-diphosphate reductase [Streptomyces zinciresistens
K42]
gi|345639927|gb|EGX61414.1| Ribonucleoside-diphosphate reductase [Streptomyces zinciresistens
K42]
Length = 337
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 147/283 (51%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E H I ++A
Sbjct: 8 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEHHLIGRLVA 67
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 68 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPRDRAA 127
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F+A+ENIP + +KA + WI+ + F L+ F AC+EG+FF G+F
Sbjct: 128 AFDAVENIPSIREKAGFCFKWINEVEKLDRLESRSDRRRFLLNLICFAACIEGLFFYGAF 187
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK RL ++V M
Sbjct: 188 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDRLR-EEVTDM 246
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 247 LREAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRL 289
>gi|440698868|ref|ZP_20881190.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
turgidiscabies Car8]
gi|440278680|gb|ELP66674.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
turgidiscabies Car8]
Length = 341
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 150/285 (52%), Gaps = 20/285 (7%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E E L++ + P+RY +E Y+ A + WT EEVDL DV +L + E+H
Sbjct: 6 EKTEKNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSEGERHM 65
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
I ++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 66 IGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPD 125
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGI 189
++ F+A+ENIP + +KA++ WI+ + A+R L+ F AC+EG+
Sbjct: 126 PADRAAAFDAVENIPSIREKAEFCFRWINEVEKLDRLETQADRRRFLLNLICFAACIEGL 185
Query: 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQ 242
FF G+F ++W + RGL+ GL + RDE +H FA + +RK Q
Sbjct: 186 FFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDQLQQ 245
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+V M+ EAVE E QF + L GMN+ M QY++ VAD+ L
Sbjct: 246 QVTDMMREAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRL 290
>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
Length = 355
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L + E+H I ++A
Sbjct: 26 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSEGEQHMIGRLVA 85
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 86 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRVA 145
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S A+R L+ F AC+EG+FF G+F
Sbjct: 146 AFAAVENIPSIREKAEFCFKWMDSVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAF 205
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK-------RLHWQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK L Q+V M+
Sbjct: 206 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDML 265
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 266 KEAVEAELQFGRDLCGDGLPGMNTESMRQYLECVADQRLTRL 307
>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
Length = 198
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 105/141 (74%), Gaps = 1/141 (0%)
Query: 157 PCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 215
P +KA WAL+WI + S+ ER+V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNE
Sbjct: 10 PHRWKKADWALNWIGNQKASYGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNE 69
Query: 216 LISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLM 275
LISRDEGLHCDFACL++ L + Q V ++ AVEIE +F+ EALP LIGMN LM
Sbjct: 70 LISRDEGLHCDFACLMFKHLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLM 129
Query: 276 SQYIKFVADRLLVHIHQCSLF 296
+YI+FVADRLL+ + ++
Sbjct: 130 KRYIEFVADRLLLELGFAKIY 150
>gi|291303011|ref|YP_003514289.1| ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
Length = 338
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 20/289 (6%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ +P L++ + P+RY +E ++ A + WT EEVDL+ D+ DSE+H
Sbjct: 2 NDSTQPRLLDPGMDLTLRPMRYPDFYEQFRAAIRNTWTVEEVDLASDLPDLATFTDSERH 61
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
I+ ++AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+
Sbjct: 62 LINRLVAFFATGDTIVANNLVLNLYKHVNAPEARLYLSRQLYEEAVHVQFYLTLLDTYLP 121
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAE------------RLVGF-ACVEG 188
D +++ + F A+E+IP + +KA++ WI + D E L+ F AC+EG
Sbjct: 122 DPEDRVKAFAAVEHIPSIKEKAEFCFKWIDTIDQLDELRTPEDRRAFLLNLICFAACIEG 181
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------W 241
+FF G+F ++WL+ RGL+ GL + RDE H +FA + ++R
Sbjct: 182 LFFYGAFAYVYWLRSRGLLDGLATGTNWVFRDESCHMNFAFSVVDVVRNEEPELFDDELT 241
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ V M+ EAV E QF + + GM + M Y+++VAD+ L +
Sbjct: 242 EAVTRMIEEAVAAELQFARDLCGEGMPGMTVNDMKSYLEYVADQRLTRL 290
>gi|386383363|ref|ZP_10068865.1| Ribonucleoside-diphosphate reductase [Streptomyces tsukubaensis
NRRL18488]
gi|385669178|gb|EIF92419.1| Ribonucleoside-diphosphate reductase [Streptomyces tsukubaensis
NRRL18488]
Length = 342
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 13 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGEQHLIGRLVA 72
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 73 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTA 132
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ D+ A+R L+ F AC+EG+FF G+F
Sbjct: 133 AFAAVENIPSIREKAQFCFRWMDQVEKLDQLDTQADRRRFLLNLICFAACIEGLFFYGAF 192
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 193 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDML 252
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M +Y++ VAD+ LV +
Sbjct: 253 KEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRLVRL 294
>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 341
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 25/289 (8%)
Query: 27 PILMEQNQ-----RFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
P++ QN + P+RY +E Y+ A + WT EEVDL DV +L +E+H
Sbjct: 5 PVMSTQNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQH 64
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
I ++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+
Sbjct: 65 LIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLP 124
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEG 188
D +++ F A+ENIP + +KA + W+ S + A+R L+ F AC+EG
Sbjct: 125 DPEDRTAAFAAVENIPSIREKASFCFKWMDSVEKLDRLETQADRRRFLLNLICFAACIEG 184
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------W 241
+FF G+F ++W + RGL+ GL + RDE +H FA + +RK
Sbjct: 185 LFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLR 244
Query: 242 QKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
Q+V M+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 245 QEVTDMLREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRL 293
>gi|374986759|ref|YP_004962254.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
Length = 340
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY ++ Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHLIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 71 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ WI S D F L+ F AC+EG+FF G+F
Sbjct: 131 AFAAVENIPSIREKAEFCFRWIDSVDKIDRLETKDERRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +R+ Q+V M+
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDML 250
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 251 REAVEAELQFARDLCGEGLPGMNTESMRQYLECVADQRLARL 292
>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
Length = 339
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 10 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVPDLAKLSPGEQHLIGRLVA 69
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++++
Sbjct: 70 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRNA 129
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + A+R L+ F AC+EG+FF G+F
Sbjct: 130 AFAAVENIPSIREKAQFCFRWMDSVEKLDQLETQADRRRFLLNLICFAACIEGLFFYGAF 189
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 190 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDML 249
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M +Y++ VAD+ L +
Sbjct: 250 KEAVEAELQFSRDLCGDGLPGMNTESMREYLQCVADQRLARL 291
>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
avermitilis MA-4680]
gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces avermitilis MA-4680]
Length = 338
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 148/279 (53%), Gaps = 20/279 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 69 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ WI+ + A+R L+ F AC+EG+FF G+F
Sbjct: 129 AFAAVENIPSIREKAEFCFKWINEVEKLDRLETKADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK Q+V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAVE E QF + L GMN+ M QY++ VAD+ L
Sbjct: 249 REAVEAELQFGRDLCGDGLPGMNTESMRQYLECVADQRL 287
>gi|345009208|ref|YP_004811562.1| ribonucleotide reductase [Streptomyces violaceusniger Tu 4113]
gi|344035557|gb|AEM81282.1| ribonucleotide reductase [Streptomyces violaceusniger Tu 4113]
Length = 340
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 153/288 (53%), Gaps = 20/288 (6%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY + ++ Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPEFYDRYRDAIKNTWTVEEVDLHSDVTDLAKLSPGEQHLIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 71 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 131 AFAAVENIPSIREKAEFCFRWMDSVEKIDRLETKQDRRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++WL+ RGL+ GL + RDE +H +FA + +R+ Q+V M+
Sbjct: 191 AYVYWLRSRGLLHGLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDML 250
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAVE E QF + L GMN++ M +Y++ VAD+ L+ + ++F
Sbjct: 251 KEAVEAELQFARDLCGDGLPGMNTASMQEYLQCVADQRLMRLGFPAVF 298
>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 340
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 71 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA + W+ S +S F L+ F AC+EG+FF G+F
Sbjct: 131 AFAAVENIPSIREKASFCFKWMDSVESIDRLETQADRRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDML 250
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M +Y++ VAD+ L +
Sbjct: 251 KEAVEAELQFGRDLCGEGLPGMNTESMREYLQCVADQRLTRL 292
>gi|383650825|ref|ZP_09961231.1| Ribonucleoside-diphosphate reductase [Streptomyces chartreusis NRRL
12338]
Length = 335
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 6 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVA 65
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 66 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 125
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA + W+ S + A+R L+ F AC+EG+FF G+F
Sbjct: 126 AFAAVENIPSIREKAGFCFKWMDSVEQLDRLETQADRRRFLLNLICFAACIEGLFFYGAF 185
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK Q+V M+
Sbjct: 186 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLRQQVTDML 245
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 246 REAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLSRL 287
>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
Length = 356
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 151/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 27 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHMIGRLVA 86
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 87 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 146
Query: 149 LFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSF 195
F+A+E IP + +KA++ W+ S ++ A+R L+ F AC+EG+FF G+F
Sbjct: 147 AFDAVEEIPSIREKAQFCFKWMDSVEKIERLETAADRRRFLLNLICFAACIEGLFFYGAF 206
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 207 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDML 266
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M +Y++ VAD+ LV +
Sbjct: 267 KEAVEAELQFGRDLCGDGLPGMNTDSMREYLECVADQRLVRL 308
>gi|386357723|ref|YP_006055969.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365808231|gb|AEW96447.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 340
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYERYRNAIKNNWTVEEVDLHSDVADLAKLSPGEQHLIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 71 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + AER L+ F AC+EG+FF G+F
Sbjct: 131 AFAAVENIPSIREKAQFCFRWMDSVEEIDRLRTKAERRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------KRLHWQKVHHMV 248
++W + RGL+ GL + RDE +H DFA + +R ++V M+
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDESMHMDFAFQVVDTVRAEEPDLFDEEMGKQVTAML 250
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M Y++ VAD+ LV +
Sbjct: 251 EEAVEAELQFARDLCGDGLPGMNTESMRAYLECVADQRLVRL 292
>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 103/130 (79%), Gaps = 3/130 (2%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y +VWEMYKKA+ASFWTAEEVDLSQD + WE L EKHFIS
Sbjct: 6 EEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWENLTSDEKHFIS 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
H+LAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSE +LL + + +
Sbjct: 66 HILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSE---ILLRNKLSEER 122
Query: 145 EKHRLFNAIE 154
K + ++++
Sbjct: 123 VKAIVADSVD 132
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 234 LLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQC 293
LLR +L ++V +V ++V+IE +FVC+ALPCAL+GMNS+LMSQYI+FVADRLL +
Sbjct: 113 LLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFVADRLLGALGYG 172
Query: 294 SLFIIA 299
++ ++
Sbjct: 173 KMYNVS 178
>gi|345001978|ref|YP_004804832.1| ribonucleoside-diphosphate reductase [Streptomyces sp. SirexAA-E]
gi|344317604|gb|AEN12292.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SirexAA-E]
Length = 340
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 20/288 (6%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 11 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 70
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 71 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 130
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F+A+E IP + +KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 131 AFDAVEEIPSIREKAQFCFKWMDSVEEIDRLETQADRRRFLLNLICFAACIEGLFFYGAF 190
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 191 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDML 250
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAVE E QF + L GMN+ M QY++ VAD+ L + +L+
Sbjct: 251 REAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLTRLGFPALY 298
>gi|357401660|ref|YP_004913585.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337768069|emb|CCB76782.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 342
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 13 LLDPGFELTLRPMRYPDFYERYRNAIKNNWTVEEVDLHSDVADLAKLSPGEQHLIGRLVA 72
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 73 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 132
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + AER L+ F AC+EG+FF G+F
Sbjct: 133 AFAAVENIPSIREKAQFCFRWMDSVEEIDRLRTKAERRRFLLNLICFAACIEGLFFYGAF 192
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------KRLHWQKVHHMV 248
++W + RGL+ GL + RDE +H DFA + +R ++V M+
Sbjct: 193 AYVYWFRSRGLLHGLATGTNWVFRDESMHMDFAFQVVDTVRAEEPDLFDEEMGKQVTAML 252
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M Y++ VAD+ LV +
Sbjct: 253 EEAVEAELQFARDLCGDGLPGMNTESMRAYLECVADQRLVRL 294
>gi|408826315|ref|ZP_11211205.1| ribonucleoside-diphosphate reductase [Streptomyces somaliensis DSM
40738]
Length = 339
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 150/292 (51%), Gaps = 20/292 (6%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+ P L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I
Sbjct: 6 RTPNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGEQHLIG 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +
Sbjct: 66 RLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPE 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFF 191
++ F A+ENIP + +KA + W+ S + A+R L+ F AC+EG+FF
Sbjct: 126 DRTAAFAAVENIPSIREKAAFCFRWMDSVEKLDRLETKADRRRFLLNLICFAACIEGLFF 185
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKV 244
G+F ++W + RGL+ GL + RDE +H FA + +RK ++V
Sbjct: 186 YGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMGFAFEVVDTVRKEEPDLFDDELGRQV 245
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
M+ EAVE E QF + L GMN+ M Y++ VAD+ L + ++
Sbjct: 246 ADMLKEAVEAELQFARDLCGDGLPGMNTESMRAYLECVADQRLTRLGLTPVY 297
>gi|408680594|ref|YP_006880421.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
Length = 338
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 148/284 (52%), Gaps = 20/284 (7%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ E L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I
Sbjct: 4 NDEKNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGEQHMI 63
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 64 GRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDP 123
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIF 190
+++ F A+ENIP + +KA++ W+ S + F L+ F AC+EG+F
Sbjct: 124 EDRAAAFAAVENIPSIREKAQFCFRWMDSVEKIDRLETQADRRRFLLNLICFAACIEGLF 183
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQK 243
F G+F ++W + RGL+ GL + RDE +H +FA + +RK Q+
Sbjct: 184 FYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALRQQ 243
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
V M+ EAVE E QF + L GMN+ M +Y++ VAD+ L
Sbjct: 244 VTDMLKEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRL 287
>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
Length = 231
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 104/131 (79%), Gaps = 4/131 (3%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L + E+HFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSE +LL T +
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE---ILLRTKFDED 122
Query: 144 KEKHRLFNAIE 154
+ K + +A+E
Sbjct: 123 RLKAIVCDAVE 133
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 234 LLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
LLR + ++ +V +AVEIE +FVC+AL CAL+GMN LMSQYI+FVADRLL +
Sbjct: 114 LLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFVADRLLAAL 170
>gi|455647607|gb|EMF26549.1| ribonucleoside-diphosphate reductase [Streptomyces gancidicus BKS
13-15]
Length = 338
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + W EEVDL DV +L E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPEEQHLIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 69 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S ++ F L+ F AC+EG+FF G+F
Sbjct: 129 AFAAVENIPSIREKAEFCFRWMDSVETIDRLESRSDRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK ++V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEELGRQVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN++ M QY++ VAD+ LV +
Sbjct: 249 REAVEAELQFARDLCGDGLPGMNTASMRQYLECVADQRLVRL 290
>gi|357411278|ref|YP_004923014.1| ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
Length = 338
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 20/288 (6%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 69 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F+A+E IP + +KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 129 AFDAVEEIPSIREKAQFCFRWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EAVE E QF + L GMN+ M QY++ VAD+ L + +L+
Sbjct: 249 KEAVEAELQFGRDLCGDGLPGMNTESMRQYLECVADQRLTRLGFPALY 296
>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
Length = 339
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 148/287 (51%), Gaps = 20/287 (6%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D+ L++ + P+RY +E Y+ A + W EEVDL DV +L E+H I
Sbjct: 5 DRTQNLLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPGEQHLI 64
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 65 GRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDP 124
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIF 190
++ F A+ENIP + +KA++ W+ S + A+R L+ F AC+EG+F
Sbjct: 125 DDRAAAFAAVENIPSIREKAEFCFTWMDSVEKLDRLETRADRRRFLLNLICFAACIEGLF 184
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQK 243
F G+F ++W + RGL+ GL + RDE +H FA + +RK Q+
Sbjct: 185 FYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQ 244
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
V M+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 245 VTDMLREAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRL 291
>gi|398782657|ref|ZP_10546371.1| ribonucleoside-diphosphate reductase [Streptomyces auratus AGR0001]
gi|396996721|gb|EJJ07707.1| ribonucleoside-diphosphate reductase [Streptomyces auratus AGR0001]
Length = 381
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 152/280 (54%), Gaps = 22/280 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY + ++ Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 52 LLDPGFELTLRPMRYPEFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 111
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 112 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 171
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S A+R L+ F AC+EG+FF G+F
Sbjct: 172 AFAAVENIPSIREKAEFCFKWMDSVESIDRLESRADRRRFLLNLICFAACIEGLFFYGAF 231
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H +FA + +R+ +L Q+V M
Sbjct: 232 AYVYWFRSRGLLHGLATGTNWVFRDESMHMEFAFSVVDTVRQEEPDLFDDKLE-QQVTEM 290
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ EAVE E QF + L GMN++ M +Y++ VAD+ L
Sbjct: 291 LREAVEAELQFGRDLCGDGLPGMNTASMREYLQCVADQRL 330
>gi|418471848|ref|ZP_13041638.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicoflavus ZG0656]
gi|371547525|gb|EHN75895.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicoflavus ZG0656]
Length = 343
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 148/283 (52%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + W EEVDL DV +L E+H I ++A
Sbjct: 14 LLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVA 73
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 74 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 133
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S F L+ F AC+EG+FF G+F
Sbjct: 134 AFAAVENIPSIREKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAF 193
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK RL ++V M
Sbjct: 194 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLR-EQVTDM 252
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 253 LREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRL 295
>gi|398017722|ref|XP_003862048.1| ribonucleoside-diphosphate reductase small chain, putative, partial
[Leishmania donovani]
gi|322500276|emb|CBZ35354.1| ribonucleoside-diphosphate reductase small chain, putative, partial
[Leishmania donovani]
Length = 196
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 103/137 (75%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
E ++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D
Sbjct: 60 AEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLND 119
Query: 78 SEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+
Sbjct: 120 GERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLD 179
Query: 138 TYIKDSKEKHRLFNAIE 154
TYI DS+EK RL +AI+
Sbjct: 180 TYITDSEEKLRLLHAIQ 196
>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
Length = 338
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L +E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHMIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 69 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F+A+E IP + +KA++ WI+ + A+R L+ F AC+EG+FF G+F
Sbjct: 129 AFDAVEEIPSIREKAQFCFKWINEVEKLDRLETQADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAV+ E QF + L GMN+ M +Y++ VAD+ LV +
Sbjct: 249 KEAVDAELQFGRDLCGDGLPGMNTESMREYLECVADQRLVRL 290
>gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|359149120|ref|ZP_09182184.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. S4]
gi|421744323|ref|ZP_16182311.1| ribonucleotide reductase, beta subunit [Streptomyces sp. SM8]
gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|406687275|gb|EKC91308.1| ribonucleotide reductase, beta subunit [Streptomyces sp. SM8]
Length = 350
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 149/283 (52%), Gaps = 22/283 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 21 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHLIGRLVA 80
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 81 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRAD 140
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSD------SFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S D S A+R L+ F AC+EG+FF G+F
Sbjct: 141 AFAAVENIPSIREKAEFCFRWMDSVDKLDQLESQADRRKFLLNLICFAACIEGLFFYGAF 200
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVHHM 247
++W + RGL+ GL + RDE +H FA + +RK +L Q V M
Sbjct: 201 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVV-AM 259
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + L GMN+ M +Y++ VAD+ L +
Sbjct: 260 LKEAVEAELQFARDLCGDGLPGMNTESMREYLECVADQRLTRL 302
>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
Length = 347
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + W EEVDL DV +L +E+H I ++A
Sbjct: 18 LLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPAERHLIGRLVA 77
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 78 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 137
Query: 149 LFNAIENIPCVAQKAKWALDWIHS----------SD--SFAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S SD F L+ F AC+EG+FF G+F
Sbjct: 138 AFAAVENIPSIREKAEFCFRWMDSVERLDRLETRSDRRRFLLNLICFAACIEGLFFYGAF 197
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK ++V M+
Sbjct: 198 AYVYWFRGRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDML 257
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ LV +
Sbjct: 258 REAVEAELQFARDLCGDGLPGMNTESMRQYLQCVADQRLVRL 299
>gi|182436093|ref|YP_001823812.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces griseus
XylebKG-1]
gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces griseus
XylebKG-1]
Length = 338
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 148/286 (51%), Gaps = 20/286 (6%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+E L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I
Sbjct: 5 EEKNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIG 64
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 65 RLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPD 124
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFF 191
++ F+A+E IP + +KA++ W+ S + F L+ F AC+EG+FF
Sbjct: 125 DRAAAFDAVEEIPSIREKAQFCFRWMDSVEKIDRLETKADRRRFLLNLICFAACIEGLFF 184
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKV 244
G+F ++W + RGL+ GL + RDE +H +FA + +RK Q+V
Sbjct: 185 YGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDALQQQV 244
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
M+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 245 TDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARL 290
>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
Length = 342
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 153/289 (52%), Gaps = 20/289 (6%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY Q ++ +K A + WT EEVDL D+ +L +E+H +S ++
Sbjct: 12 LLLDPGMDLTLRPMRYPQFFDRFKDAIRNTWTVEEVDLHADLADLAKLSPAEQHLVSRLV 71
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL I PE R + Q+ E +H + Y LL+TY+ D K+++
Sbjct: 72 AFFATGDTIVANNLVLNLYQHINSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKQRY 131
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F A+ENIP +A+KA++ WI S +F L+ F AC+EG+FF G+
Sbjct: 132 EAFAAVENIPSIARKAEFCFKWIDSIFELRELKTRADRRAFLLNLICFAACIEGLFFYGA 191
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHM 247
F +++L+ RG++ GL + RDE +H FA + +R Q+V M
Sbjct: 192 FAYVYFLRSRGVLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDM 251
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EAV+ E QF + L + GM + M QY++ VADR L + ++
Sbjct: 252 LAEAVDCEVQFAADLLEQGVSGMPLADMRQYLQHVADRRLAMLGIAPMY 300
>gi|411004498|ref|ZP_11380827.1| ribonucleoside-diphosphate reductase [Streptomyces globisporus
C-1027]
Length = 339
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 147/286 (51%), Gaps = 20/286 (6%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
E L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I
Sbjct: 6 NEKNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIG 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 66 RLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPD 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFF 191
++ F+A+E IP + +KA++ W+ S + F L+ F AC+EG+FF
Sbjct: 126 DRAAAFDAVEEIPSIREKAQFCFKWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFF 185
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKV 244
G+F ++W + RGL+ GL + RDE +H +FA + +RK Q+V
Sbjct: 186 YGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQV 245
Query: 245 HHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
M+ EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 246 TDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARL 291
>gi|365866748|ref|ZP_09406352.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces sp. W007]
gi|364003827|gb|EHM24963.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces sp. W007]
Length = 338
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSPGEQHMIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 69 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F+A+E IP + +KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 129 AFDAVEEIPSIREKAQFCFKWMDSVEKIDRLETKADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALEQQVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 249 REAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARL 290
>gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
Length = 338
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 69 FFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F+A+E IP + +KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 129 AFDAVEEIPSIREKAQFCFKWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK Q+V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 249 KEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARL 290
>gi|395771544|ref|ZP_10452059.1| ribonucleoside-diphosphate reductase [Streptomyces acidiscabies
84-104]
Length = 338
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSPEEQHLIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 69 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRTA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIH------SSDSFAER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ WI+ S + A+R L+ F AC+EG+FF G+F
Sbjct: 129 AFAAVENIPSIREKAEFCFKWINEVEKLDSLQTKADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK-------RLHWQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK ++V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPDLFDETLQKEVTDML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M Y++ VAD+ LV +
Sbjct: 249 AEAVEAELQFARDLCGEGLPGMNTESMRAYLECVADQRLVRL 290
>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
Length = 341
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + W EEVDL DV +L E+H I ++A
Sbjct: 12 LLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPEEQHLIGRLVA 71
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 72 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 131
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S + A+R L+ F AC+EG+FF G+F
Sbjct: 132 AFAAVENIPSIREKAEFCFRWMDSVEKLDRLETQADRRRFLLNLICFAACIEGLFFYGAF 191
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK Q+V M+
Sbjct: 192 AYVYWFRGRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAML 251
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ LV +
Sbjct: 252 REAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLVRL 293
>gi|453055152|gb|EMF02599.1| ribonucleoside-diphosphate reductase [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 340
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 151/284 (53%), Gaps = 20/284 (7%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D++ L++ + P+RY ++ Y+ A + WT EEVDL DV +L E+H I
Sbjct: 6 DRQKNLLDPGFELTLRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 66 GRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDP 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIF 190
+E+ F A+ENIP + KA++ W+ S +S A+R L+ F AC+EG+F
Sbjct: 126 EERAAAFAAVENIPSIRDKAQFCFKWMDSVEKIDKLESKADRRRFLLNLICFAACIEGLF 185
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQK 243
F G+F ++W + RGL+ GL + RDE +H +FA + +R+ Q+
Sbjct: 186 FYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRQEEPDLFDDELQQQ 245
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
V M+ EAVE E QF + L GMN+ M +Y++ VAD+ L
Sbjct: 246 VTDMLKEAVEAELQFGRDLCGEGLPGMNTESMREYLQCVADQRL 289
>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 343
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 20/293 (6%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D L++ + P+RY Q ++ Y+ A + WT EEVDL DV +L E+H I
Sbjct: 9 DHAKNLLDPGFELTLRPMRYPQFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMI 68
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S ++AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 69 SRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDP 128
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIF 190
++ F A+ENIP + +KA++ W+ S +S A+R L+ F AC+EG+F
Sbjct: 129 DDRAASFAAVENIPSIREKAEFCFRWMDSVEKIDRLESKADRRRFLLNLICFAACIEGLF 188
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQK 243
F G+F ++W + RGL+ GL + RDE +H +FA + +R+ ++
Sbjct: 189 FYGAFAYVYWFRSRGLLHGLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDDLERQ 248
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V M+ EAVE E QF + L GMN+ M Y++ VAD+ L + ++F
Sbjct: 249 VTDMLKEAVEAELQFAHDLCGDGLPGMNTESMRAYLECVADQRLARLGFPAVF 301
>gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
Length = 343
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + W EEVDL DV +L E+H I ++A
Sbjct: 14 LLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVA 73
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 74 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 133
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S F L+ F AC+EG+FF G+F
Sbjct: 134 AFAAVENIPSIREKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAF 193
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK ++V M+
Sbjct: 194 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDML 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 254 REAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRL 295
>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces coelicolor A3(2)]
gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
Length = 343
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + W EEVDL DV +L E+H I ++A
Sbjct: 14 LLDPGFELTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVA 73
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 74 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAA 133
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S +S F L+ F AC+EG+FF G+F
Sbjct: 134 AFAAVENIPSIREKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAF 193
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H FA + +RK ++V M+
Sbjct: 194 AYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDML 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M QY++ VAD+ L +
Sbjct: 254 REAVEAELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRL 295
>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
Length = 345
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 148/292 (50%), Gaps = 30/292 (10%)
Query: 26 EPILMEQNQR----------FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
EP L EQ +R + P+RY +E Y+ A + WT EEVDL DV +L
Sbjct: 3 EPTLPEQKKRHQNLLDPGFELTLRPMRYPDFYERYRNAIKNTWTVEEVDLHSDVADLAKL 62
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
E+H I ++AFFA D IV NL I PEAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS------DSFAER------LVGF 183
L+TY+ D ++ F A+ENIP + +KA++ WI +S A+R L+ F
Sbjct: 123 LDTYLPDPDDRADAFAAVENIPSIREKAEFCFKWIDEVEKIDRLESKADRRRFLLNLICF 182
Query: 184 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-- 240
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +RK
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 241 -----WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
Q+V M+ AV E QF + L GMN+ M +Y++ VAD+ L
Sbjct: 243 FDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMNTESMREYLQCVADQRL 294
>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
Length = 331
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 147/280 (52%), Gaps = 20/280 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY ++ Y+ A + WT EEVDL D+ +RL +E+H +S ++
Sbjct: 1 MLLDPGLDLTLRPMRYPHFFDRYRDAIKNTWTVEEVDLHSDLTDLDRLSAAERHLVSRLV 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEDERT 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F A+ENIP + +KA++ WI S +F L+ F AC+EG+FF G+
Sbjct: 121 EAFAAVENIPSIRRKAEFCFRWIDSLGNLQRLESREDRRAFLLNLICFAACIEGLFFYGA 180
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------KRLHWQKVHHM 247
F +++L+ RGL+ GL + RDE +H FA + +R Q+V M
Sbjct: 181 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREM 240
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ EAVE ETQF + L + G+ + M Y++ VADR L
Sbjct: 241 LAEAVECETQFAGDLLGGGVSGLPVADMRAYLEHVADRRL 280
>gi|386845602|ref|YP_006263615.1| ribonucleoside-diphosphate reductase subunit beta [Actinoplanes sp.
SE50/110]
gi|359833106|gb|AEV81547.1| ribonucleoside-diphosphate reductase beta chain [Actinoplanes sp.
SE50/110]
Length = 331
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 149/280 (53%), Gaps = 20/280 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P++Y ++ +K A + WT EEVDL D+ L D+EKH +S ++
Sbjct: 1 MLLDPGMDLTLRPMKYPHFFDRFKDAIKNTWTVEEVDLHSDLADLAVLSDAEKHLVSRLV 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEAERF 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F AIENIP +A+KA++ WI S +F ++ F AC+EG+FF G+
Sbjct: 121 EAFAAIENIPSIARKAEFCFKWIDSVFDLRRLETREHRRAFLLNVICFAACIEGLFFYGA 180
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHM 247
F +++L+ RG++ GL + RDE +H FA + +R+ Q+V M
Sbjct: 181 FAYVYFLRSRGVLQGLASGTNWVFRDESMHMAFAFDVVDQVRREEPDLFDAEMQQQVRDM 240
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ EAVE E QF + L + GM+ + M +Y++ VADR L
Sbjct: 241 LAEAVECEVQFAADLLEQGVSGMSLADMREYLQHVADRRL 280
>gi|441155687|ref|ZP_20966846.1| ribonucleoside-diphosphate reductase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440617882|gb|ELQ80969.1| ribonucleoside-diphosphate reductase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 354
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 148/279 (53%), Gaps = 20/279 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 25 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 84
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 85 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAA 144
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDSF------AER------LVGF-ACVEGIFFSGSF 195
F A+ENIP + +KA++ W+ S ++ A+R L+ F AC+EG+FF G+F
Sbjct: 145 AFAAVENIPSIREKAEFCFKWMDSVETIDRLESKADRRRFLLNLICFAACIEGLFFYGAF 204
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +R+ ++V M+
Sbjct: 205 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFSVVDTVREEEPDLFDEELERQVTDML 264
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAVE E QF + L GMN+ M +Y++ VAD+ L
Sbjct: 265 KEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRL 303
>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces sp. Tu6071]
gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces sp. Tu6071]
Length = 345
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 147/295 (49%), Gaps = 30/295 (10%)
Query: 26 EPILMEQNQR----------FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
+P L EQ +R + P+RY +E Y+ A + WT EEVDL DV +L
Sbjct: 3 DPTLPEQKKRNQNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKL 62
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
E+H I ++AFFA D IV NL I PEAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF 183
L+TY+ D ++ F A+ENIP + KA++ WI + F L+ F
Sbjct: 123 LDTYLPDPDDRAAAFAAVENIPSIRAKAEFCFKWIDEVEKIDRLESRSDRRRFLLNLICF 182
Query: 184 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK---RL 239
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +RK L
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 240 HWQK----VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
K V M+ AV+ E QF + L GMN+ M +Y++ VAD+ LV +
Sbjct: 243 FDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMNTESMREYLQCVADQRLVRL 297
>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
Length = 345
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 147/295 (49%), Gaps = 30/295 (10%)
Query: 26 EPILMEQNQR----------FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERL 75
+P L EQ +R + P+RY +E Y+ A + WT EEVDL DV +L
Sbjct: 3 DPTLPEQKKRNQNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKL 62
Query: 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLL 135
E+H I ++AFFA D IV NL I PEAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 136 LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF 183
L+TY+ D ++ F A+ENIP + KA++ WI + F L+ F
Sbjct: 123 LDTYLPDPDDRAAAFAAVENIPSIRAKAEFCFKWIDEVEKIDRLESQSDRRRFLLNLICF 182
Query: 184 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK---RL 239
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +RK L
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 240 HWQK----VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
K V M+ AV+ E QF + L GMN+ M +Y++ VAD+ LV +
Sbjct: 243 FDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMNTESMREYLQCVADQRLVRL 297
>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
Length = 344
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 150/293 (51%), Gaps = 20/293 (6%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
D L++ + P+RY ++ +K A + WT EEVDL D+ RL +E+H +
Sbjct: 10 DTRHTLLDPGMDLTLRPMRYPHFFDRFKDAIKNTWTVEEVDLHSDLADLARLSPAERHLV 69
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
S ++AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D
Sbjct: 70 SRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDE 129
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIF 190
+E+ F AIENIP + +KA++ WI S +F L+ F AC+EG+F
Sbjct: 130 RERFAAFAAIENIPSIRRKAEFCFRWIDSIFELRELKTREDRRAFLLNLICFAACIEGLF 189
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQK 243
F G+F +++L+ RGL+ GL + RDE +H FA + +R ++
Sbjct: 190 FYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRHEEPDLFDDELARQ 249
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V M+ EAVE E QF + L + G++ M QY++ VADR L + L+
Sbjct: 250 VREMLAEAVECEAQFAEDLLEQGVSGLSLDDMRQYLQHVADRRLAQLGIAPLY 302
>gi|358457765|ref|ZP_09167981.1| Ribonucleoside-diphosphate reductase [Frankia sp. CN3]
gi|357079045|gb|EHI88488.1| Ribonucleoside-diphosphate reductase [Frankia sp. CN3]
Length = 331
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 150/289 (51%), Gaps = 20/289 (6%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+ Y ++ Y+ A + WT EEVDL D+ RL +E+H ++ ++
Sbjct: 1 MLLDPGMSLTLRPMSYPAFYDRYRAAIRNTWTVEEVDLHSDLADLHRLSPAERHLVNRLV 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D+ E+
Sbjct: 61 AFFATGDTIVANNLVLNLYRHINAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDADERA 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
+ F A+EN+P + KA++ WI + +F L+ F AC+EG+FF G+
Sbjct: 121 QAFAAVENVPSIRAKAQFCFRWIDTLGGLDQLSTRADRRAFLLNLICFAACIEGLFFYGA 180
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHM 247
F +++L+ RGL+ GL + RDE +H +FA + +R + V M
Sbjct: 181 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMEFALDVVRTIRAQEPDLVDGEFEASVRQM 240
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EAV+ ET+F + L + GM M Y++ VADR LV + +F
Sbjct: 241 LAEAVDAETEFARDLLAGGVAGMTVVDMRAYLEHVADRRLVQLGFAPMF 289
>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
Length = 350
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 20/289 (6%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY ++ +K+A + WT EEVDL D+ +L +E+H +S ++
Sbjct: 20 MLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLADLAKLSPAERHLVSRLV 79
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D KE+
Sbjct: 80 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKERF 139
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F A+ENIP +A+KA++ WI S +F L+ F AC+EG+FF G+
Sbjct: 140 AAFAAVENIPSIARKAEFCFRWIDSIFELRELRTRADRRAFLLNLICFAACIEGLFFYGA 199
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHM 247
F +++L+ RGL+ GL + RDE +H FA + +R +++ M
Sbjct: 200 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDM 259
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V EAV+ E QF + L + G++ + M +Y++ VADR LV + ++
Sbjct: 260 VTEAVDCEAQFAEDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPIY 308
>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
Length = 342
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 150/280 (53%), Gaps = 20/280 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY + ++ +K A + WT EEVDL D+ +L +E+H +S ++
Sbjct: 12 MLLDPGMDLTLRPMRYPRFFDRFKDAIKNTWTVEEVDLHSDLADLAKLSPAERHLVSRLV 71
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D KE+
Sbjct: 72 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKERF 131
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F+A+ENIP +A+KA++ WI S +F L+ F AC+EG+FF G+
Sbjct: 132 AAFDAVENIPSIARKAEFCFRWIDSIFELRELRTRADRRAFLLNLICFAACIEGLFFYGA 191
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHM 247
F +++L+ RGL+ GL + RDE +H FA + +R ++V M
Sbjct: 192 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEM 251
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ EAVE E F + L + GM+ + M +Y++ VADR L
Sbjct: 252 LAEAVECEVSFAEDLLGQGVPGMSLADMREYLQHVADRRL 291
>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
Length = 348
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E +K A + WT EEVDL D+ +L +E H + ++A
Sbjct: 19 LLDPGMDLTLRPMRYPHFFERFKAAIRNTWTVEEVDLHSDLADLRKLSPAEHHLVKRLVA 78
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TYI D +E+
Sbjct: 79 FFATGDTIVANNLVLNLYQHINSPEARLYLSRQLFEEAVHVQFYLALLDTYITDERERAE 138
Query: 149 LFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGSF 195
F AIENIP + +KA + WI S SF L+ F AC+EG+FF G+F
Sbjct: 139 AFAAIENIPSIKRKADFCFRWIDSIFDLRELRTAADRRSFLLNLICFAACIEGLFFYGAF 198
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMV 248
+++L+ RGL+ GL + RDE +H FA + +R+ ++ M+
Sbjct: 199 AYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVIDTVRREEPELFDDELARQAREML 258
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAV+ ETQF + L + GM+ + M Y++ VADR V +
Sbjct: 259 AEAVDCETQFAEDLLGQGVPGMSLADMRSYLEHVADRRCVQL 300
>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
Length = 849
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 45/308 (14%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWT---------------------AEEVD 64
+P+L E R+CMFP++ +VW YKKA+AS + AE+VD
Sbjct: 557 KPLLDENPDRYCMFPLKEDRVWSQYKKAEASRPSGQAPNDPLCMAHTTFWTTFWTAEDVD 616
Query: 65 LSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIA 123
S D + W +RL E+ F+S VLA+ AASD ++ N+ ARF+ D+++ EARAFY FQ+
Sbjct: 617 FSSDARDWQDRLAPGERSFLSSVLAYLAASDRLIQHNVVARFMIDVELAEARAFYAFQLF 676
Query: 124 MENIHSEMYSLLLETYIKDSKEK-HRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182
+N+H+EM S +L +E+ + + +P KA W WI+ + A L
Sbjct: 677 KKNVHTEMVSAILAALFAGKEEQLAAVLRTVLALPAFQAKAAWVRKWINRQATAAAALPP 736
Query: 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQ 242
G+ + +LISRDEG+H + A ++YSLLR +L
Sbjct: 737 LLLPRGLLPG-----------------TGHATDLISRDEGVHVESAGVMYSLLRSKLTDS 779
Query: 243 KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIAC-- 300
+ +V EAVE E FVC LP G+ + M +Y+++V DRLL + L+ +A
Sbjct: 780 QAQGIVGEAVEAERAFVCGQLPLEATGLEAGAMEEYLQYVGDRLLGALGHAPLYRVAANP 839
Query: 301 ---VKGIA 305
++GIA
Sbjct: 840 LPWLEGIA 847
>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
Length = 350
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 20/289 (6%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY ++ +K+A + WT EEVDL D+ +L +E+H +S ++
Sbjct: 20 LLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVSRLV 79
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ + KE+
Sbjct: 80 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERF 139
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F A+ENIP +A+KA++ WI S +F L+ F AC+EG+FF G+
Sbjct: 140 AAFAAVENIPSIARKAEFCFRWIDSIFELRELRTQADRRAFLLNLICFAACIEGLFFYGA 199
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHM 247
F +++L+ RGL+ GL + RDE +H FA + +R ++V M
Sbjct: 200 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEM 259
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V EAV+ E QF + L + G++ + M +Y++ VADR LV + ++
Sbjct: 260 VAEAVDCEVQFAEDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMY 308
>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
20547]
gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
20547]
Length = 365
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 26/315 (8%)
Query: 3 SLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEE 62
++ +ET E + R+ +Q L++ + P+RY Q +EM++ A + WT EE
Sbjct: 14 TMTSETHLESDLRDAVKQGSS-----LLDPGMSLTLRPMRYPQFYEMFRDAIKNTWTVEE 68
Query: 63 VDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
+DL D+ +L +E+H +S ++AFFA D IV NL I PEAR + Q
Sbjct: 69 IDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYEHINSPEARLYLSRQ 128
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAE--- 178
+ E +H + Y LL+TY+ D E+ F A+ENIP + KA++ WI S ++ +
Sbjct: 129 LFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFCFTWIDSIENLGQLET 188
Query: 179 ---------RLVGFA-CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 228
L+ F C+EG+FF G+F +++L+ RGL+ GL + RDE +H FA
Sbjct: 189 KEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFA 248
Query: 229 CLLYSLLRKR-------LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
+ +R +V M+ EAV+ E QF + L + G++ + M Y++
Sbjct: 249 FEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLSVADMRAYLEN 308
Query: 282 VADRLLVHIHQCSLF 296
VADR V + ++
Sbjct: 309 VADRRAVQLGMPEIY 323
>gi|347756560|ref|YP_004864123.1| ribonucleotide reductase subunit beta [Candidatus
Chloracidobacterium thermophilum B]
gi|347589077|gb|AEP13606.1| Ribonucleotide reductase, beta subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 332
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 149/284 (52%), Gaps = 21/284 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
+L++ + P++Y +EMY+ A + WT EEVD S DV RL +E+H I +
Sbjct: 1 MLLDPGFNLTLRPMKYPLFYEMYRNAVKNTWTVEEVDFSTDVADLHSRLTPAERHLIHRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL I PEAR + Q+ E +H + Y LL+TYI D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHINAPEARMYLSRQLFEEALHVQFYLTLLDTYIPDLAER 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGFA-CVEGIFFSG 193
R F A+ NIP +A+KA++ WI S F L+ FA CVEG+FF
Sbjct: 121 ERAFAAVHNIPSIARKAQFCQRWIDSIFLLDELHTREDRRKFLLNLLCFASCVEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHH 246
+F +++L+ +GL+ GL + RDE LH +FA + +R+ +
Sbjct: 181 AFAYVYFLRSKGLLHGLASGTNWVFRDESLHMNFAFAVADQVRQEEPELFDDAMEAALVQ 240
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
M+ EAV+ E QF + L + G++ + M QY++FVAD+ L +
Sbjct: 241 MIEEAVDCEMQFAEDLLSGGVAGLSLADMRQYLEFVADQRLARL 284
>gi|442322490|ref|YP_007362511.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
stipitatus DSM 14675]
gi|441490132|gb|AGC46827.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
stipitatus DSM 14675]
Length = 336
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 152/290 (52%), Gaps = 21/290 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHV 86
+L+E + P+ Y +EMY+ A + WT EEVD S D V ++ D+E+H I +
Sbjct: 1 MLLEPGLNLTLRPMAYPAFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHINAPEARMYLSRQLFEEALHVQFYLTLLDTYVPDPAER 120
Query: 147 HRLFNAIENIPCVAQKAKWALDW---IHSSDSFAER---------LVGFA-CVEGIFFSG 193
+ F AI+NIP + +KA++ + W IH D+ + L+ FA C+EG+FF
Sbjct: 121 AKAFAAIDNIPSIQRKARFCMKWMDSIHDVDALKTKDERRRFLLNLICFAGCIEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHH 246
+F +++L+ +GL+ GL + RDE H FA + RK + V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMGFAFECIQVARKEEPDLFDAKMERDVEA 240
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
M+ EAVE ETQF + L + G++ M Y+++VAD+ L + ++F
Sbjct: 241 MMREAVECETQFAQDLLSGGVAGLSVQEMRGYLEYVADQRLQMLGIPAVF 290
>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
Length = 288
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 97/125 (77%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ + E +L E RF +FPI++ +W+ YKKA ASFWT +EVDLS+D + WE L D E+H
Sbjct: 42 ESNGEILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERH 101
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FIS VLAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +ENIHSEMYS +++TYI+
Sbjct: 102 FISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIR 161
Query: 142 DSKEK 146
D K+K
Sbjct: 162 DQKQK 166
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 240 HWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+++K M + ++ + +++ EALP LIG+N LM QYI++VAD LL +H ++
Sbjct: 184 NYKKFTSMFNACIDAKQEYLTEALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY 240
>gi|383777025|ref|YP_005461591.1| putative ribonucleoside-diphosphate reductase small subunit
[Actinoplanes missouriensis 431]
gi|381370257|dbj|BAL87075.1| putative ribonucleoside-diphosphate reductase small subunit
[Actinoplanes missouriensis 431]
Length = 331
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 20/289 (6%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P++Y ++ +K A + WT EEVDL D+ +L +E+H +S ++
Sbjct: 1 MLLDPGMDLTLRPMKYPHFFDRFKDAIKNTWTVEEVDLHSDLADLAKLTPAEQHLVSRLV 60
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDPDERA 120
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGS 194
F A++NIP +A+KA++ WI S +F ++ F AC+EG+FF G+
Sbjct: 121 AAFAAVDNIPSIARKAEFCFKWIDSVFELRELRTKADRRAFLLNVICFAACIEGLFFYGA 180
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHM 247
F +++L+ RGL+ GL + RDE +H FA + +R Q+V M
Sbjct: 181 FAYVYFLRSRGLLQGLASGTNWVFRDESMHMAFAFDVVDQVRAEEPDLFDAEMEQQVRDM 240
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+ EAVE E QF + L + GM+ M +Y++ VADR L + ++
Sbjct: 241 LAEAVECEVQFAADLLEQGVSGMSLGDMREYLQHVADRRLAALGIAPIY 289
>gi|332018842|gb|EGI59398.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
echinatior]
Length = 176
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 96/123 (78%), Gaps = 2/123 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDL-SQDVQHW-ERLLDSEKHFI 83
EP+L E RF +FPI+Y +W+MYKKA ASFWT EEV L QD + W E+L EK FI
Sbjct: 54 EPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEVSLHKQDKKDWNEKLNSDEKRFI 113
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL +F +++IPEAR FYGFQIA+ENIHSEMYSLL+ETYI D
Sbjct: 114 SHVLAFFAASDGIVNENLIEKFSQEVKIPEARCFYGFQIAIENIHSEMYSLLIETYISDP 173
Query: 144 KEK 146
KEK
Sbjct: 174 KEK 176
>gi|383315471|ref|YP_005376313.1| ribonucleotide reductase subunit beta [Frateuria aurantia DSM 6220]
gi|379042575|gb|AFC84631.1| ribonucleotide reductase, beta subunit [Frateuria aurantia DSM
6220]
Length = 340
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 23/267 (8%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVL 98
P++Y Q +EM+K + WT EE++ D+ ++ D+E+H I ++AFFA D IV
Sbjct: 21 PMKYPQYFEMFKNGIKNTWTVEEINFQIDISDLHSKMNDAERHLIYRLVAFFATGDTIVA 80
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+ YI D E+ + F AIENIP
Sbjct: 81 NNLVLNLYQHINAPEARMYLSRQLYEEALHIQFYLTLLDNYIPDINERQKAFAAIENIPS 140
Query: 159 VAQKAKWALDWI------HSSDSFAER------LVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+ +K + WI H +S A+R L+ F AC+EG+FF G+F +++L+ +G
Sbjct: 141 IKKKGDFCFKWIDSVQNLHRLESKADRKQFLLNLICFAACIEGLFFYGAFSYVYYLRDKG 200
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKR--------LHWQKVHHMVHEAVEIETQ 257
L+PGL + RDE H +FA + +R++ L Q V+ M+ EA++ ET
Sbjct: 201 LLPGLASGTNWVFRDESCHMEFAFDVVKTVREQEPDLFDAELEAQ-VYEMLEEAIQCETA 259
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVAD 284
F + L ++G +M QY+++ AD
Sbjct: 260 FADDVLGLGVMGFTPKMMRQYLEYCAD 286
>gi|17567153|ref|NP_508269.1| Protein F19G12.2 [Caenorhabditis elegans]
gi|351001563|emb|CCD69733.1| Protein F19G12.2 [Caenorhabditis elegans]
Length = 668
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERL 180
IA+ENIHSEMY+ LLE YI+D E++ LFNAI + KA W L WI ++ F+ERL
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERL 504
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
FA VEGIFFS SF AIFWLKKRGL+PGLT SNELIS LH + ++L R+R
Sbjct: 505 AAFAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELISM-FLLHPNCFFSTFNLQRRRKP 563
Query: 241 WQ-KVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ ++ +++E+V +E FV E+LP LIGMN +M +Y++FVAD LL
Sbjct: 564 AESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLL 611
>gi|443290856|ref|ZP_21029950.1| Ribonucleoside-diphosphate reductase [Micromonospora lupini str.
Lupac 08]
gi|385886411|emb|CCH18024.1| Ribonucleoside-diphosphate reductase [Micromonospora lupini str.
Lupac 08]
Length = 345
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 150/283 (53%), Gaps = 20/283 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
+L++ + P+RY ++ ++ A + WT EEVDL D+ ++L +E+H +S ++
Sbjct: 15 MLLDPGMDLTLRPMRYPHFFDRFRAAIRNTWTVEEVDLHADLADLDKLSPAERHLVSRLV 74
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PE R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 75 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDETERF 134
Query: 148 RLFNAIENIPCVAQKAKWALDWIHS---------SD---SFAERLVGF-ACVEGIFFSGS 194
F AIENIP + +KA++ WI S SD +F L+ F AC+EG+FF G+
Sbjct: 135 AAFAAIENIPSIRRKAEFCFRWIDSLGELRELRTSDDRRAFLLNLICFAACIEGLFFYGA 194
Query: 195 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHM 247
F +++L+ RGL+ GL + RDE +H FA + +R +V M
Sbjct: 195 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDDDLADQVRQM 254
Query: 248 VHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ EAVE E QF + + + G+ + M +Y++ VADR LV +
Sbjct: 255 LTEAVECEVQFAEDLVGQGVPGLTLADMREYLQHVADRRLVQL 297
>gi|430741872|ref|YP_007201001.1| ribonucleotide reductase subunit beta [Singulisphaera acidiphila
DSM 18658]
gi|430013592|gb|AGA25306.1| ribonucleotide reductase, beta subunit [Singulisphaera acidiphila
DSM 18658]
Length = 332
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 146/281 (51%), Gaps = 21/281 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFISHV 86
+L++ + P+RY +EMYK A + WT EEVD S D+ +R + +EKH I +
Sbjct: 1 MLLDPGMDLTLRPMRYPAFFEMYKAAIKNTWTVEEVDFSTDLADLDRRITPAEKHLIQRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL I PEAR + Q+ E++H Y LL+ Y+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYQHINSPEARMYLSRQLYEESLHVHFYLTLLDNYLPDMAER 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSG 193
+ F AIENIP + KA + WI S + F L+ F AC+EG+FF
Sbjct: 121 EQAFAAIENIPSIKGKADFCFRWIDSIEGLDRLETRAHRRQFLLNLICFAACIEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHH 246
+F +++L+ +GL+ GL + RDE H FA + ++ R+ V
Sbjct: 181 AFAYVYFLRSKGLLHGLATGTNWVFRDESAHIAFAFNVIAIARREEPDLFDAALEADVVA 240
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
M+ EAVE ET F + L ++GM+ + +Y+++VADR L
Sbjct: 241 MMREAVECETAFARDVLSFGVVGMSLQDLRKYLEYVADRRL 281
>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
[Streptomyces microflavus]
Length = 321
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 20/282 (7%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLA 88
L++ + P+RY +E Y+ A + WT EEVDL DV +L E+H I ++A
Sbjct: 9 LLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVA 68
Query: 89 FFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHR 148
FFA D IV NL I PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 69 FFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPAERAA 128
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSDS------------FAERLVGF-ACVEGIFFSGSF 195
F A+ENIP + KA++ W+ S + F L+ F AC+EG+FF G+F
Sbjct: 129 AFAAVENIPSIRDKAQFCFKWMDSVEKIDQLETRADRRRFLLNLICFAACIEGLFFYGAF 188
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMV 248
++W + RGL+ GL + RDE +H +FA + +RK ++V M+
Sbjct: 189 AYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAML 248
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
EAVE E QF + L GMN+ M +Y++ VAD+ L +
Sbjct: 249 KEAVEAELQFGRDLCGEGLPGMNTESMREYLQCVADQRLTRL 290
>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
xanthus DK 1622]
gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
xanthus DK 1622]
Length = 349
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 152/302 (50%), Gaps = 21/302 (6%)
Query: 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWER 74
E + E +L+ + P+ Y Q +EMY+ A + WT EEVD S D V +
Sbjct: 2 ETPRRSARSTEAMLLNPGLNLTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSK 61
Query: 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 134
+ D+E+H I ++AFFA D IV NL + PEAR + Q+ E +H + Y
Sbjct: 62 MTDAERHLIHRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLT 121
Query: 135 LLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVG 182
LL+TY+ D E+ F A++NIP + +KA++ + W+ S F L+
Sbjct: 122 LLDTYVPDPAERAMAFAAVDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLLNLIC 181
Query: 183 FA-CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR--- 238
FA C+EG+FF +F +++L+ +GL+ GL + RDE H FA + RK
Sbjct: 182 FAGCIEGLFFFAAFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPD 241
Query: 239 ----LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCS 294
+ V M+ EAVE ETQF + L ++G++ M Y+++VAD+ L +
Sbjct: 242 LFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLSVQDMRGYLEYVADQRLQMLGMTP 301
Query: 295 LF 296
+F
Sbjct: 302 VF 303
>gi|393224234|gb|EJD32719.1| ribonucleotide reductase [Auricularia delicata TFB-10046 SS5]
Length = 270
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 2/232 (0%)
Query: 58 WTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARA 116
W V+ D + W E L D E+ ++++L AAS + ENLA+ F + +++ EAR
Sbjct: 3 WATSGVEPVGDCRDWDENLSDGERDLLAYLLVSVAASKAVDFENLASHFASCVRMEEARC 62
Query: 117 FYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS- 175
FYG Q+A H E +S +IK + + FNAI N+P V +KA+W + W+ + D
Sbjct: 63 FYGLQLASAGAHMETFSRFARAFIKGAASRAFYFNAIANVPFVRRKAQWVMRWVDAQDPP 122
Query: 176 FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235
F RLV F + IF+SG+F + W +RG++P L ++EL++RDE + DFAC L LL
Sbjct: 123 FRVRLVAFLAAKAIFYSGTFFCLSWFDERGILPALCHASELVARDESVGIDFACRLLRLL 182
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
R V +V +AV IE +F+ E + + ++ M Y+++VADRLL
Sbjct: 183 GVRPCHHVVRRIVLDAVNIEKEFLKELVGASGFAFDADRMGLYVEYVADRLL 234
>gi|405354037|ref|ZP_11023446.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Chondromyces apiculatus DSM 436]
gi|397092728|gb|EJJ23477.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 336
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 21/290 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHV 86
+L+ + P+ Y Q +EMY+ A + WT EEVD S D V ++ D+E+H I +
Sbjct: 1 MLLNPGLNLTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAER 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGFA-CVEGIFFSG 193
+ F A++NIP + +KA++ + W+ S F L+ FA C+EG+FF
Sbjct: 121 AKAFAAVDNIPSIQRKAQFCMKWMDSIQGMDTLQTKAHRRQFLLNLICFAGCIEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHH 246
+F +++L+ +GL+ GL + RDE H FA + RK + V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVA 240
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
M+ EAV+ ETQF + L ++G++ M Y+++VAD+ L + +F
Sbjct: 241 MLREAVDCETQFAQDLLSGGVVGLSVQDMRGYLEYVADQRLQQLGMSPVF 290
>gi|393225089|gb|EJD33222.1| ferritin-like protein [Auricularia delicata TFB-10046 SS5]
Length = 381
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 140/254 (55%), Gaps = 2/254 (0%)
Query: 36 FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFISHVLAFFAASD 94
C PI Y Q+W +YKKA AS+W + VD DV + R L+ EK I +++A A++
Sbjct: 51 LCPNPIPYSQLWSIYKKAAASYWVVDYVDPRPDVYDYRRSLNIIEKDIIVYLIALLASTK 110
Query: 95 GIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE 154
G+ ++A F ++ E + F+G Q+AMEN H + S L ++KDS E+ ++F+ +
Sbjct: 111 GVHSTSIARYFTGGPELMETKYFFGIQMAMENTHLDCCSRFLWAFVKDSDEREQVFDVLS 170
Query: 155 NIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 213
+P V + W WI + S + RLV FAC + + + G+F + W++ R L+P L
Sbjct: 171 ELPYVQNRTAWTKRWIDDTQSPYHVRLVAFACSQVLPYCGTFAILLWMEDRELLPSLARC 230
Query: 214 NELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSS 273
N L++ D G + L LL+K+ + +A EIE +F+ +LP + IG+
Sbjct: 231 NRLMAGDAGTLIRYVRELLPLLKKQPCQHIAEDAIVDAAEIEKRFLTLSLPISYIGLEEK 290
Query: 274 LMSQYIKFVADRLL 287
++ YI+ ADRLL
Sbjct: 291 DIALYIEHTADRLL 304
>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I, partial
[Homo sapiens]
Length = 172
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 95/122 (77%)
Query: 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 234
++ ER+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 3 TYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKH 62
Query: 235 LRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCS 294
L + ++V ++ AV IE +F+ EALP LIGMN +LM QYI+FVADRL++ +
Sbjct: 63 LVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSK 122
Query: 295 LF 296
+F
Sbjct: 123 VF 124
>gi|338536259|ref|YP_004669593.1| ribonucleoside-diphosphate reductase [Myxococcus fulvus HW-1]
gi|337262355|gb|AEI68515.1| Ribonucleoside-diphosphate reductase [Myxococcus fulvus HW-1]
Length = 336
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 21/290 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHV 86
+L+ + P+ Y Q +EMY+ A + WT EEVD S D V ++ D+E+H I +
Sbjct: 1 MLLNPGLNLTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPGER 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHS------------SDSFAERLVGFA-CVEGIFFSG 193
+ F AI+NIP + +KA++ + W+ S F L+ FA C+EG+FF
Sbjct: 121 AKAFAAIDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLLNLICFAGCIEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHH 246
+F +++L+ +GL+ GL + RDE H FA + RK + V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVA 240
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
M+ EAV+ ETQF + L ++G++ M Y+++VAD+ L + +F
Sbjct: 241 MLREAVDCETQFAQDLLSGGVMGLSVQDMRGYLEYVADQRLQMLGMSPVF 290
>gi|383454419|ref|YP_005368408.1| ribonucleoside-diphosphate reductase subunit beta [Corallococcus
coralloides DSM 2259]
gi|380733637|gb|AFE09639.1| ribonucleoside-diphosphate reductase subunit beta [Corallococcus
coralloides DSM 2259]
Length = 336
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 21/290 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHV 86
+L++ + P+ Y +EMY+ A + WT EEVD S D V ++ D+E+H I +
Sbjct: 1 MLLDPGMNLTLRPMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAER 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHS----------SD--SFAERLVGFA-CVEGIFFSG 193
+ F A++NIP + +KA++ + W+ S SD F L+ FA C+EG+FF
Sbjct: 121 AKAFAAVDNIPSIQRKARFCMKWMDSIQALDQVRSKSDRRQFLLNLICFAGCIEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHH 246
+F +++L+ +GL+ GL + RDE H FA RK + V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFEAIKTARKEEPDLFDAGLEKDVVQ 240
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
M+ +AVE ETQF + L ++G++ M Y+++VAD+ L + +F
Sbjct: 241 MMRDAVECETQFAQDLLSGGVMGLSVQEMRGYLEYVADQRLQMLGMAPIF 290
>gi|221055321|ref|XP_002258799.1| Ribonucleotide reductase small subunit [Plasmodium knowlesi strain
H]
gi|193808869|emb|CAQ39572.1| Ribonucleotide reductase small subunit,putative [Plasmodium
knowlesi strain H]
Length = 335
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 158/280 (56%), Gaps = 5/280 (1%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEK 80
+ ++ + IL E R+ MFPI+YK W YK+ ++ FWTAE+ + +D + E + +
Sbjct: 14 DAQNNDDILKENQFRWVMFPIKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNML 73
Query: 81 HFISHVLAFFAASDGIVLEN---LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
+ ++ F++ D V E + ++ L+ IQIPE RAFYGFQ+ MENIH E+Y+ + E
Sbjct: 74 VKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFE 133
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF-C 196
TYI D+K+K + N + + V +K KW + ++ F +LV + + F+G+
Sbjct: 134 TYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFETNIPFYNKLV-LIYISKVLFNGTLNI 192
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
I + K+ ++P L +E I RDE LH DF+ + + L +L ++++ AV++E
Sbjct: 193 LIGYCKENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLNNKLKYERLLDYFKMAVKLEY 252
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
QF E L +++ + + +++++AD +LV++ F
Sbjct: 253 QFAIEMLDLSVLKIKKEQVKSFLEYLADTMLVNLKHPKYF 292
>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
aurantiaca DW4/3-1]
gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 336
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 23/293 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHV 86
+L+ + P+ Y +EMY+ A + WT EEVD S D V ++ D+E+H I +
Sbjct: 1 MLLNAGMNLTLRPMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D ++
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPADR 120
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAE------------RLVGFA-CVEGIFFSG 193
+ F AI+NIP + +KA++ L W+ S A+ L+ FA C+EG+FF
Sbjct: 121 AKAFAAIDNIPSIQRKARFCLKWMDSIHDLAQLKTREDRRRFLLNLICFAGCIEGLFFFA 180
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLHWQKVH 245
+F +++L+ +GL+ GL + RDE H FA + R+ R+ V
Sbjct: 181 AFAYVYFLRSKGLLHGLAAGTNWVFRDESTHMAFAFEAIRVARQEEPDLFDARMQ-ADVV 239
Query: 246 HMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
M+ EAVE ET F + L + G++ M QY+++VAD+ L + +F +
Sbjct: 240 AMMREAVECETLFAQDLLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFRV 292
>gi|156096873|ref|XP_001614470.1| ribonucleotide reductase small subunit [Plasmodium vivax Sal-1]
gi|148803344|gb|EDL44743.1| ribonucleotide reductase small subunit, putative [Plasmodium vivax]
Length = 335
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 157/280 (56%), Gaps = 5/280 (1%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEK 80
+ ++ + IL E R+ MFPI+YK W YK+ ++ FWTAE+ + +D + E + +
Sbjct: 14 DAQNNDDILKENQFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKKFLESIDKNML 73
Query: 81 HFISHVLAFFAASDGIVLEN---LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
+ ++ F++ D V E + ++ L+ IQIPE RAFYGFQ+ MENIH E+Y+ + E
Sbjct: 74 VKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFE 133
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF-C 196
TYI D+K+K + N + + V +K KW + ++ F +LV + + F+G+
Sbjct: 134 TYIPDAKQKRVIINKVIQLDSVLKKQKWLTELFETNIPFYNKLV-LIYISKVLFNGTLNI 192
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
I + K+ ++P L +E I RDE LH DF+ + + L +L ++ + AVE+E
Sbjct: 193 LIGYCKENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLNNKLKYESLLDYFKMAVELEY 252
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
QF E L +++ + + +++++AD +LV++ F
Sbjct: 253 QFSMEMLELSVLKIKKEQVKSFLEYLADTMLVNLKHPKYF 292
>gi|349802205|gb|AEQ16575.1| putative ribonucleotide reductase m2 polypeptide [Pipa carvalhoi]
Length = 131
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
Query: 149 LFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LFNAIE +PCV +KA WAL WI ++ ER+V FA V GIFFSGSF +IFWLKKRGLM
Sbjct: 1 LFNAIETLPCVKKKADWALRWIGDKQATYGERVVAFAAV-GIFFSGSFASIFWLKKRGLM 59
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCAL 267
PGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+ EALP L
Sbjct: 60 PGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVIELITDAVQIEQEFLTEALPVNL 119
Query: 268 IGMNSS 273
IGM+++
Sbjct: 120 IGMDNT 125
>gi|389774176|ref|ZP_10192323.1| ribonucleoside-diphosphate reductase [Rhodanobacter spathiphylli
B39]
gi|388438591|gb|EIL95336.1| ribonucleoside-diphosphate reductase [Rhodanobacter spathiphylli
B39]
Length = 341
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 139/272 (51%), Gaps = 21/272 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVL 98
P+RY +EMY+ A + WT EEVD S D + + ++ +++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIRNTWTVEEVDFSMDTRDLDTKMSPADRHLIQRLVAFFATGDTIVS 81
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+TYI D E++ F AIE IP
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPTERNAAFAAIETIPS 141
Query: 159 VAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+ QK + WI S F L+ F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQGLQRLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMVHEAVEIETQF 258
L+ GL + RDE H FA + +R + ++ M+ +A+ ETQF
Sbjct: 202 LLHGLAAGTNWVFRDESCHMAFAFDVVRTVRAQEPELFDDAMRAQIEEMMEDAIACETQF 261
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ L + GM+ M QY+++ AD+ V +
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFVQL 293
>gi|389794223|ref|ZP_10197381.1| ribonucleoside-diphosphate reductase [Rhodanobacter fulvus Jip2]
gi|388432748|gb|EIL89737.1| ribonucleoside-diphosphate reductase [Rhodanobacter fulvus Jip2]
Length = 341
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 139/272 (51%), Gaps = 21/272 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVL 98
P+RY +EMY+ A + WT EEVD S D + + ++ +++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIRRLVAFFATGDTIVS 81
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+TYI D E++ F AIE IP
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPAERNAAFAAIETIPS 141
Query: 159 VAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+ QK + WI S F L+ F AC+EG+FF +F +++L+ RG
Sbjct: 142 IQQKGAFCFKWIDSIQGLRRLETRAHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMVHEAVEIETQF 258
L+ GL + RDE H FA + +R++ +V M+ EA+ ETQF
Sbjct: 202 LLHGLAAGTNWVFRDESCHMAFAFDVVRTVREQEPDLFDADMRAQVEQMMEEAIACETQF 261
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ L + GM+ M QY+++ AD+ +
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFAQL 293
>gi|389730179|ref|ZP_10189354.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 115]
gi|388440951|gb|EIL97271.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 115]
Length = 341
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 21/272 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVL 98
P+RY + +EMY+ A + WT +EVD S D ++ +++H I ++AFFA D IV
Sbjct: 22 PMRYPEFYEMYRNAIKNTWTVDEVDFSLDTTDLNSKMSAADRHLIHRLIAFFATGDTIVS 81
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+TYI D E+ + F+AIENIP
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDQNERAKAFSAIENIPS 141
Query: 159 VAQKAKWALDWIHSS------DSFAER------LVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+ K ++ WI S ++ A+R L+ F AC+EG+FF +F +++ + RG
Sbjct: 142 IRAKGEFCFKWIDSIQDISRLETRAQRRQFLLNLICFAACIEGMFFFAAFAYVYYFRSRG 201
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLR-------KRLHWQKVHHMVHEAVEIETQF 258
L+ GL + RDE H FA + +R +V M+ +A+ ETQF
Sbjct: 202 LLHGLASGTNWVFRDESCHMAFAFEVVRTVRAEEPDLFDEEMRAQVEEMLEDAIACETQF 261
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ L ++G++S M QY+++ AD+ L +
Sbjct: 262 AEDVLSGGVVGLSSKEMRQYLEYCADQRLAQL 293
>gi|389799150|ref|ZP_10202153.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 116-2]
gi|388443609|gb|EIL99751.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 116-2]
Length = 341
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 139/272 (51%), Gaps = 21/272 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVL 98
P+RY +EMY+ A + WT EEVD S D + + ++ +++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIQRLVAFFATGDTIVS 81
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+TYI D E++ F AIE IP
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPAERNGAFAAIETIPS 141
Query: 159 VAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+ QK + WI S F L+ F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQDLRQLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMVHEAVEIETQF 258
L+ GL + RDE H FA + +R + +V M+ +A+ ETQF
Sbjct: 202 LLHGLAAGTNWVFRDESGHMAFAFEVVRTVRAQEPELFDDAMRAQVEEMMGDAIACETQF 261
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ L + GM+ M QY+++ AD+ V +
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFVQL 293
>gi|258597037|ref|XP_001347439.2| ribonucleotide reductase small subunit, putative [Plasmodium
falciparum 3D7]
gi|254922415|gb|AAN35352.2| ribonucleotide reductase small subunit, putative [Plasmodium
falciparum 3D7]
Length = 335
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 154/274 (56%), Gaps = 5/274 (1%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEK 80
E ++ + IL E R+ MFPI+YK W YK+ ++ FWTAE+ + +D Q+ E + +
Sbjct: 14 EAQNNDEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENIDKNML 73
Query: 81 HFISHVLAFFAASDGIVLEN---LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLE 137
+ ++ F++ D V E + ++ L+ IQIPE RAFYGFQ+ MENIH E+Y+ + E
Sbjct: 74 VKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFE 133
Query: 138 TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF-C 196
TYI DSK+K + N + + V +K KW + S+ + +LV + + F+G+
Sbjct: 134 TYIPDSKQKRVIINKVIELDSVLKKQKWLTEIFESNIPYYNKLV-LLYISKVLFNGTLNI 192
Query: 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIET 256
I + K+ ++P L +E I RDE LH DF+ + + L +L ++ V AV++E
Sbjct: 193 LIGYCKENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLVNKLKYEHVLDYFKMAVDLEY 252
Query: 257 QFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
QF E L ++ + + +++++ D +L ++
Sbjct: 253 QFSLEMLELNVLKIKKEQVRAFLEYLTDTMLTNL 286
>gi|148688625|gb|EDL20572.1| mCG1032193 [Mus musculus]
Length = 150
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Query: 156 IPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 214
+PCV +KA WAL WI ++ + ER+V FA VEGIFFSGSF +I WLKKRGLMPGLTFSN
Sbjct: 1 MPCVKKKADWALRWIGDKEAAYGERVVAFAAVEGIFFSGSFASILWLKKRGLMPGLTFSN 60
Query: 215 ELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSL 274
ELISRDEGLH DFACL++ L + Q+V ++ AV IE +F+ EALP LIGM+ +L
Sbjct: 61 ELISRDEGLHWDFACLMFKHLAHKPSEQRVKEIITTAVRIEQEFLTEALPVKLIGMSCTL 120
Query: 275 MSQYI 279
M QYI
Sbjct: 121 MKQYI 125
>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
Length = 336
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 140/269 (52%), Gaps = 21/269 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHVLAFFAASDGIVL 98
P++Y +EMYK + WT +EVD S D V ++ +SEKH I ++AFFA D IV
Sbjct: 17 PMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRLVAFFATGDSIVG 76
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL + PE R + Q+ E +H + Y LL+ YI + E+ F A+ENIP
Sbjct: 77 NNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDERAEAFAAVENIPS 136
Query: 159 VAQKAKWALDWIHSSDSFAE------------RLVGFA-CVEGIFFSGSFCAIFWLKKRG 205
+ +KA + WI S + E L+ FA CVEG+FF +F +++L+ +G
Sbjct: 137 IKKKADFCYKWIDSINELTELNTIEDRRRFLMNLICFATCVEGLFFYAAFAYVYFLRSKG 196
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRK---RLHWQKVHHMV----HEAVEIETQF 258
L+ GL + RDE +H FA + RK L Q++ MV +A+E E +F
Sbjct: 197 LLAGLASGTNWVFRDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEF 256
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ L + G+++ M QY+++ AD+ L
Sbjct: 257 AHDVLNLGVAGLSAKDMRQYLEYCADQRL 285
>gi|190572323|ref|YP_001970168.1| ribonucleotide diphosphate reductase small subunit
[Stenotrophomonas maltophilia K279a]
gi|408825288|ref|ZP_11210178.1| ribonucleoside-diphosphate reductase [Pseudomonas geniculata N1]
gi|424666640|ref|ZP_18103666.1| hypothetical protein A1OC_00193 [Stenotrophomonas maltophilia
Ab55555]
gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
[Stenotrophomonas maltophilia K279a]
gi|401070086|gb|EJP78604.1| hypothetical protein A1OC_00193 [Stenotrophomonas maltophilia
Ab55555]
gi|456737526|gb|EMF62221.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Stenotrophomonas maltophilia EPM1]
Length = 339
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 144/279 (51%), Gaps = 21/279 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
+L++ + P+RY Q ++MY+ A + WT EE++ D+ ++ E+H I +
Sbjct: 8 MLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPGERHLIHRL 67
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+ Y+ D +E+
Sbjct: 68 VAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPEER 127
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAE-------------RLVGFACVEGIFFSG 193
+ F+A+ENI + +KA + WI S S ++ AC+EG+FF
Sbjct: 128 AKAFSAVENIDSIKKKADFCFKWIDSIQSLTRIETREQRRQFLLNQICFAACIEGLFFFA 187
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHH 246
+F +++ + RGL+PGL + RDE H +FA ++R+ Q+V+
Sbjct: 188 AFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYD 247
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADR 285
M+ EA+E E QF + L + G+++ M QY++ AD+
Sbjct: 248 MLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQ 286
>gi|352086179|ref|ZP_08953758.1| Ribonucleoside-diphosphate reductase [Rhodanobacter sp. 2APBS1]
gi|351679813|gb|EHA62947.1| Ribonucleoside-diphosphate reductase [Rhodanobacter sp. 2APBS1]
Length = 341
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 138/272 (50%), Gaps = 21/272 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVL 98
P+RY +EMY+ A + WT EEVD S D + + ++ +++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIQRLVAFFATGDTIVS 81
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+ YI D E++ F AIE IP
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDAYIPDPAERNGAFAAIETIPS 141
Query: 159 VAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+ QK + WI S F L+ F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQDLPQLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHHMVHEAVEIETQF 258
L+ GL + RDE H FA + +R + +V M+ +A+ ET+F
Sbjct: 202 LLHGLAAGTNWVFRDESGHMAFAFEVVRTVRAQEPELFDDAMRAQVEEMMEDAIACETRF 261
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+ L + GM+ M QY+++ AD+ V +
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFVQL 293
>gi|426403937|ref|YP_007022908.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425860605|gb|AFY01641.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 332
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 140/269 (52%), Gaps = 21/269 (7%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHVLAFFAASDGIVL 98
P++Y +EMYK + WT +EVD S D V ++ +SEKH I ++AFFA D IV
Sbjct: 13 PMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRLVAFFATGDSIVG 72
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL + PE R + Q+ E +H + Y LL+ YI + E+ F A+ENIP
Sbjct: 73 NNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDERAEAFAAVENIPS 132
Query: 159 VAQKAKWALDWIHSSDSFAE------------RLVGFA-CVEGIFFSGSFCAIFWLKKRG 205
+ +KA + WI S + E L+ FA CVEG+FF +F +++L+ +G
Sbjct: 133 IKKKADFCYKWIDSINELNELKTIEDRRRFLMNLICFATCVEGLFFYAAFAYVYFLRSKG 192
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRK---RLHWQKVHHMV----HEAVEIETQF 258
L+ GL + RDE +H FA + R+ L Q++ MV +A+E E +F
Sbjct: 193 LLAGLASGTNWVFRDESMHMAFAIEVVKTARREEPELFNQQMEDMVVQMLEDAIECEMEF 252
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL 287
+ L + G+++ M QY+++ AD+ L
Sbjct: 253 AHDVLNLGVAGLSAKDMRQYLEYCADQRL 281
>gi|320107274|ref|YP_004182864.1| ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
Length = 346
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 161/320 (50%), Gaps = 28/320 (8%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQD-VQHWERLLDSEKHFISHVLAFFAASDGIVL 98
P+RY Q ++M++ + WT EEVD D V +RL +E H I ++AFFA D IV
Sbjct: 27 PMRYPQFYDMFRDGIKNTWTVEEVDFQTDLVDLKQRLTPAEIHTIQRLVAFFATGDSIVS 86
Query: 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPC 158
NL I PEAR + Q+ E +H + Y LL+ YI + +E++ F A+ENIP
Sbjct: 87 NNLVLNLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDNYIPEPEERNAAFAAVENIPS 146
Query: 159 VAQKAKWALDWIHS------------SDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRG 205
+++KA + + W+ S F L+ F AC+EG+FF +F +++ + +G
Sbjct: 147 ISKKADFCMKWMDSIQQLDQLETKEHRRQFLLNLICFAACIEGLFFFAAFAYVYFFRSKG 206
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEIETQF 258
L+ GL + RDE H +FA + ++R + W ++V M+ EA++ E QF
Sbjct: 207 LLHGLASGTNWVFRDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQF 266
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLL------VHIHQCSLFIIACVKGIARAGLFFP 312
+ L + G++ M QY+ +VAD L H + + F ++ + FF
Sbjct: 267 AEDLLSGGVAGLSVRDMRQYLGYVADSRLERLGIGAHFNAKNPFSFMELQDVQELTNFFE 326
Query: 313 FLLSGC-IRVPEEVQCGKSF 331
+S VP EV+ G+ F
Sbjct: 327 RRVSAYQTAVPGEVEFGEDF 346
>gi|444917549|ref|ZP_21237644.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Cystobacter fuscus DSM 2262]
gi|444710890|gb|ELW51851.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Cystobacter fuscus DSM 2262]
Length = 353
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 147/281 (52%), Gaps = 23/281 (8%)
Query: 29 LMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVL 87
L++ + P++Y +EMY+ A + WT EEVD S DV ++ +++H I ++
Sbjct: 23 LLDPGLNLTLRPMQYPAFFEMYRNAIKNTWTVEEVDFSTDVGDLRSKMSAADRHLIQRLV 82
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 83 AFFATGDSIVSNNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAERA 142
Query: 148 RLFNAIENIPCVAQKA----KWALDWIHSSDSFAER---------LVGF-ACVEGIFFSG 193
+ F AI+NIP + +KA KW +D +H D R L+ F AC+EG+FF
Sbjct: 143 KAFAAIDNIPSIQEKAAFCFKW-MDSVHQLDRLETREQRRAFLLNLICFAACIEGLFFFA 201
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------QKVHH 246
+F +++L+ RGL+ GL + RDE H FA + +R+ + V
Sbjct: 202 AFAYVYFLRSRGLLHGLAGGTNWVFRDESAHMAFAFEVVKCVRREEPGLFDAQMERDVVT 261
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
M+ EAV E +F + L + G++ + M QY+++VAD+ L
Sbjct: 262 MMEEAVACELRFAEDLLGGGVAGLSVNEMRQYLEYVADQRL 302
>gi|386716674|ref|YP_006183000.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
[Stenotrophomonas maltophilia D457]
gi|384076236|emb|CCH10817.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Stenotrophomonas maltophilia D457]
Length = 339
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 21/279 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
+L++ + P+RY Q ++MY+ A + WT EE++ D+ ++ E+H I +
Sbjct: 8 MLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPGERHLIHRL 67
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+ Y+ D +E+
Sbjct: 68 VAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPEER 127
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFAE-------------RLVGFACVEGIFFSG 193
+ F+A+ENI + +KA + WI S ++ AC+EG+FF
Sbjct: 128 AKAFSAVENIDSIKKKADFCFKWIDSIQDLTRIETREQRRQFLLNQICFAACIEGLFFFA 187
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHH 246
+F +++ + RGL+PGL + RDE H +FA ++R+ Q+V+
Sbjct: 188 AFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYD 247
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADR 285
M+ EA+E E QF + L + G+++ M QY++ AD+
Sbjct: 248 MLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQ 286
>gi|344205623|ref|YP_004790764.1| ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
JV3]
gi|343776985|gb|AEM49538.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
JV3]
Length = 339
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 147/279 (52%), Gaps = 21/279 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
+L++ + P+RY Q ++MY+ A + WT EE++ D+ ++ E+H I +
Sbjct: 8 MLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPGERHLIHRL 67
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+ Y+ D +E+
Sbjct: 68 VAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPEER 127
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHS------SDSFAER-------LVGFACVEGIFFSG 193
+ F+A+ENI + +KA + WI S ++ A+R + AC+EG+FF
Sbjct: 128 AKAFSAVENIDSIKKKADFCFKWIDSIQDLTRIETRAQRRQFLLNQICFAACIEGLFFFA 187
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHH 246
+F +++ + RGL+PGL + RDE H +FA ++R+ Q+V+
Sbjct: 188 AFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYD 247
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADR 285
M+ EA+E E QF + L + G+++ M QY++ AD+
Sbjct: 248 MLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQ 286
>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
Length = 339
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 21/279 (7%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
+L++ + P+RY Q ++MY+ A + WT EE++ D+ ++ E+H I +
Sbjct: 8 MLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPGERHLIHRL 67
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+ Y+ D +E+
Sbjct: 68 VAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPEER 127
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHS------SDSFAER-------LVGFACVEGIFFSG 193
+ F A+ENI + +KA + WI S ++ AER + AC+EG+FF
Sbjct: 128 VKAFAAVENIDSIKKKADFCFKWIDSIQDLKRIETRAERRQFLLNQICFAACIEGLFFFA 187
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHH 246
+F +++ + RGL+PGL + RDE H +FA ++R+ Q+V+
Sbjct: 188 AFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYD 247
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADR 285
M+ EA+E E QF + L + G+++ M QY++ AD+
Sbjct: 248 MLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQ 286
>gi|50404173|gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
Length = 324
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 150/271 (55%), Gaps = 10/271 (3%)
Query: 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEK 80
E ++ + IL E R+ MFPI+YK W YK+ ++ FWTAE+ + +D Q+ E + +K
Sbjct: 14 EAQNNDEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENI---DK 70
Query: 81 HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140
+ + L + I ++ L+ IQIPE RAFYGFQ+ MENIH E+Y+ + ETYI
Sbjct: 71 NMLVKDLHVYEEQALI-----TSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYI 125
Query: 141 KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSF-CAIF 199
DSK+K + N + + V +K KW + S+ + +LV + + F+G+ I
Sbjct: 126 PDSKQKRVIINKVIELDSVLKKQKWLTEIFESNIPYYNKLV-LLYISKVLFNGTLNILIG 184
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259
+ K+ ++P L +E I RDE LH DF+ + + L +L ++ V AV++E QF
Sbjct: 185 YCKENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLVNKLKYEHVLDYFKMAVDLEYQFS 244
Query: 260 CEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E L ++ + + +++++ D +L ++
Sbjct: 245 LEMLELNVLKIKKEQVRAFLEYLTDTMLTNL 275
>gi|194363985|ref|YP_002026595.1| ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
Length = 339
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 24/289 (8%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHV 86
+L++ + P+RY Q ++MY+ A + WT EE++ D+ ++ E+H I +
Sbjct: 8 MLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDISDLHSKMSPGERHLIHRL 67
Query: 87 LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 146
+AFFA D IV NL + PEAR + Q+ E +H + Y LL+ Y+ D E+
Sbjct: 68 VAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPDER 127
Query: 147 HRLFNAIENIPCVAQKAKWALDWIHSSDSFA-------------ERLVGFACVEGIFFSG 193
+ F A+ENI + +KA + WI S + ++ AC+EG+FF
Sbjct: 128 VKAFAAVENIDSIKKKADFCFKWIDSIQNLKRIETREERRQFLLNQICFAACIEGLFFFA 187
Query: 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR-------LHWQKVHH 246
+F +++ + RGL+ GL + RDE H DFA ++R+ Q V+
Sbjct: 188 AFAYVYYFRSRGLLNGLASGTNWVFRDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYD 247
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSL 295
M+ EA+E E QF + L + G+++ M QY++ AD H H+ +
Sbjct: 248 MLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADN---HFHRLGM 293
>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
Length = 356
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 147/293 (50%), Gaps = 21/293 (7%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFI 83
+ P L++ + P+ Y + Y++A + WT EEVD S D++ ER+ +E+H I
Sbjct: 22 RPPRLLDPGTCLTLRPMAYPDFYAQYRQAIRNTWTVEEVDFSTDLRDLAERMGPAERHLI 81
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
++AFFA D IV NL + PEAR + Q+ E +H + Y LL+TY+ D
Sbjct: 82 QRLVAFFATGDSIVANNLVLSLYRHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDP 141
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDW------IHSSDSFAER------LVGF-ACVEGIF 190
++H F A+E IP + +KA++ L W I D A R L+ F AC EG+F
Sbjct: 142 DQRHAAFAAVETIPSIRRKAEFCLRWQDTVAAIPRLDGPAHRRQFLLNLICFAACTEGLF 201
Query: 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQK 243
F G+F +++L+ RGL+ GL + RDE H FA + ++R +
Sbjct: 202 FYGAFAYVYFLRSRGLLHGLAAGTNWVFRDESAHMAFAFSVIDVVRDQEPELFDAELEAA 261
Query: 244 VHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
V M+ EAV E F + L + G+ + + Y+++ AD+ L + + +
Sbjct: 262 VVEMIEEAVACEVAFAEDLLGLGVAGLTVADLRAYLEYCADQRLQRLGMATRY 314
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,025,971,606
Number of Sequences: 23463169
Number of extensions: 199686059
Number of successful extensions: 716367
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3233
Number of HSP's successfully gapped in prelim test: 996
Number of HSP's that attempted gapping in prelim test: 706472
Number of HSP's gapped (non-prelim): 5212
length of query: 331
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 188
effective length of database: 9,003,962,200
effective search space: 1692744893600
effective search space used: 1692744893600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 77 (34.3 bits)