BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020108
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis
thaliana GN=RNR2A PE=1 SV=2
Length = 341
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/290 (81%), Positives = 257/290 (88%), Gaps = 7/290 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSLK E + E+GE E EP+LM QNQRF MFPIRYK +WEMYKKA+ASFWTA
Sbjct: 1 MGSLK---EGQGRDMEEGESE----EPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQ WE L DSEKHFISH+LAFFAASDGIVLENLAARFLND+Q+PEARAFYGF
Sbjct: 54 EEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGF 113
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLET+IKDSKEK RLFNAIE IPC+++KAKW LDWI S SFA RL
Sbjct: 114 QIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRL 173
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L
Sbjct: 174 VAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP 233
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+KV+ +VHEAVEIET+FVC+ALPC LIGMNS+LMSQYI+FVADRLLV +
Sbjct: 234 LEKVYQIVHEAVEIETEFVCKALPCDLIGMNSNLMSQYIQFVADRLLVTL 283
>sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana
tabacum PE=2 SV=1
Length = 329
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/263 (76%), Positives = 228/263 (86%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y Q+WEMYKKA ASFWTAEEVDLS D +HWE L E+HFI+
Sbjct: 6 EEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFIT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+YIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSD 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLF A+E PCV +KAKWAL WI S++FAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR +L ++V +V +AVEIE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLL 287
CAL+GMN LMS+YI+FVADRLL
Sbjct: 246 CALVGMNGDLMSKYIEFVADRLL 268
>sp|Q6Y657|RIR2B_ARATH Putative ribonucleoside-diphosphate reductase small chain B
OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1
Length = 333
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/267 (74%), Positives = 231/267 (86%), Gaps = 1/267 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L + E+HFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCV +KA+WA+ WI+ S SFAER+V FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL+YSLLR +L ++ +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVHI 290
PCAL+GMN LMSQYI+FVADRLL +
Sbjct: 246 PCALVGMNRELMSQYIEFVADRLLAAL 272
>sp|Q9LSD0|RIR2C_ARATH Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis
thaliana GN=TSO2 PE=2 SV=1
Length = 332
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/264 (75%), Positives = 231/264 (87%), Gaps = 1/264 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFI 83
+EP+L RFCMFPI Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L D E+HFI
Sbjct: 6 EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCVA+KA+WA+ WI S +FAER++ FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ +L ++V +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLL 287
PCAL+GMN LMSQYI+FVADRLL
Sbjct: 246 PCALVGMNRDLMSQYIEFVADRLL 269
>sp|P42521|RIR2_DICDI Ribonucleoside-diphosphate reductase small subunit OS=Dictyostelium
discoideum GN=rnrB-1 PE=2 SV=2
Length = 338
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/272 (68%), Positives = 221/272 (81%), Gaps = 1/272 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI+Y +W MYKKA AS W AEE+DL D WE +L D+E+HFIS
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA RF++++QIPEAR FYGFQIA+ENIHSE YSLL+ETYIKD +
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K +LFNAIE IPC+ +KA+WAL WI+ SDSFAERLV FA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLM GLTFSNELISRDEGLHCDFACLLY+ L+++L + + M+ +AVE E +F+CE+LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
LIGMNS MSQYI+F ADRL+V + +F
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIF 283
>sp|P79733|RIR2_DANRE Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio
GN=rrm2 PE=1 SV=1
Length = 386
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/268 (66%), Positives = 218/268 (81%), Gaps = 1/268 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FI
Sbjct: 65 EEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFI 124
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 125 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 184
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 185 KEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLK 244
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + + V ++ AVEIE +F+ +A
Sbjct: 245 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLTDA 304
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHI 290
LP LIGMN LM QYI+FVADRLL+ +
Sbjct: 305 LPVKLIGMNCDLMKQYIEFVADRLLLEL 332
>sp|Q60561|RIR2_MESAU Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus
auratus GN=RRM2 PE=2 SV=1
Length = 386
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/276 (65%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKV 344
>sp|P07201|RIR2_SPISO Ribonucleoside-diphosphate reductase small chain OS=Spisula
solidissima PE=2 SV=2
Length = 384
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 218/266 (81%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF + PI+Y +W+MYKKA+ASFWTAEEVDLS+D+ HWE L EKHFISH
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD +E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WA+ WI+ S S+AER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
G+MPGLTFSNELISRDEGLHCDFACL++S L + +++H ++ EAV+IE F+ EALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
C LIGMN LM QYI+FVADRLL+ +
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLEL 327
>sp|Q4KLN6|RIR2_RAT Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus
norvegicus GN=Rrm2 PE=2 SV=1
Length = 390
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 220/276 (79%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ +V IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKV 344
>sp|P11157|RIR2_MOUSE Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus
GN=Rrm2 PE=1 SV=1
Length = 390
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/276 (65%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRV 344
>sp|Q9C167|RIR2_NEUCR Ribonucleoside-diphosphate reductase small chain OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=rnr-2 PE=3 SV=2
Length = 410
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/279 (64%), Positives = 220/279 (78%), Gaps = 2/279 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 71 KPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 130
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 131 EKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 190
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAI+ IPC+ +KA WAL WI S +FA+RLV FA VEGIFFSG+F +
Sbjct: 191 YIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFAS 250
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q + ++ +AV IE +
Sbjct: 251 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQE 310
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
F+ EALPCAL+GMN+ LM QYI+FVADRLLV + ++
Sbjct: 311 FLTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIY 349
>sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens
GN=RRM2 PE=1 SV=1
Length = 389
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 343
>sp|Q4R7Q7|RIR2_MACFA Ribonucleoside-diphosphate reductase subunit M2 OS=Macaca
fascicularis GN=RRM2 PE=2 SV=1
Length = 389
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV +E +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLFII 298
LP LIGMN +LM QYI+FVADRL++ + +F +
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 343
>sp|O15910|RIR2_TRYBB Ribonucleoside-diphosphate reductase small chain OS=Trypanosoma
brucei brucei GN=RNR2 PE=2 SV=1
Length = 337
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/272 (64%), Positives = 214/272 (78%), Gaps = 1/272 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L D E
Sbjct: 11 KEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L++TY
Sbjct: 71 RHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSFCAIF
Sbjct: 131 VVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+C+ALP LIGMNS LM+QYI+FVADRLLV +
Sbjct: 251 ICDALPVRLIGMNSQLMTQYIEFVADRLLVSL 282
>sp|Q4R741|RIR2B_MACFA Ribonucleoside-diphosphate reductase subunit M2 B OS=Macaca
fascicularis GN=RRM2B PE=2 SV=1
Length = 351
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 219/276 (79%), Gaps = 1/276 (0%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 28 KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKY 87
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 88 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 147
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 148 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 207
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLT 267
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 268 EALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIF 303
>sp|Q5R9G0|RIR2B_PONAB Ribonucleoside-diphosphate reductase subunit M2 B OS=Pongo abelii
GN=RRM2B PE=2 SV=1
Length = 351
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 303
>sp|Q7LG56|RIR2B_HUMAN Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens
GN=RRM2B PE=1 SV=1
Length = 351
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV + +F
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 303
>sp|P48592|RIR2_DROME Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila
melanogaster GN=RnrS PE=1 SV=2
Length = 393
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 213/266 (80%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLLV +
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVEL 339
>sp|Q6PEE3|RIR2B_MOUSE Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus
GN=Rrm2b PE=1 SV=1
Length = 351
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/296 (61%), Positives = 224/296 (75%), Gaps = 10/296 (3%)
Query: 11 EVNQREQGEQ---EQE------DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
E + E+GEQ E E ++EP+L + ++RF +FPI+Y +W MYK+AQASFWTAE
Sbjct: 8 EAARPEKGEQLCSETEENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAE 67
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQ
Sbjct: 68 EVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQ 127
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERL 180
I +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+
Sbjct: 128 ILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERV 187
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 188 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPS 247
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSLF 296
+V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL + +F
Sbjct: 248 EDRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIF 303
>sp|P50650|RIR2_PLAF4 Ribonucleoside-diphosphate reductase small chain OS=Plasmodium
falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1
Length = 349
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/279 (64%), Positives = 222/279 (79%), Gaps = 3/279 (1%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + ++G +E E IL +++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D
Sbjct: 17 EREFSDLQKG---KEINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSD 73
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
++ +E+L ++EKHFI HVLAFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIH
Sbjct: 74 LKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIH 133
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SE YSLL++ YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEG
Sbjct: 134 SETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEG 193
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
I FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L Q + ++V
Sbjct: 194 ILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIV 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
EAVE+E F+CE+LPC LIGMNS LMSQYI+FVADRLL
Sbjct: 254 KEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLL 292
>sp|O46310|RIR2_LEIAM Ribonucleoside-diphosphate reductase small subunit OS=Leishmania
amazonensis PE=3 SV=1
Length = 345
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 168/270 (62%), Positives = 217/270 (80%), Gaps = 1/270 (0%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D E+HFI
Sbjct: 23 EEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFI 82
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+TYI DS
Sbjct: 83 KHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDS 142
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RL +AI+ IPC+ +KA+W + WI SS SF +RL+GFA VEGIFFSGSFCA+FWLKK
Sbjct: 143 EEKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKK 202
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE +F+C+A
Sbjct: 203 RGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDA 262
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
LP LIGMN+ LM+QYI+FVADRLLV + +
Sbjct: 263 LPVRLIGMNAELMAQYIEFVADRLLVSLGE 292
>sp|P20493|RIR2_VACCC Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Copenhagen) GN=F4L PE=2 SV=1
Length = 319
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>sp|P11158|RIR2_VACCW Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Western Reserve) GN=VACWR043 PE=2 SV=1
Length = 319
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>sp|O57175|RIR2_VACCA Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Ankara) GN=MVA032L PE=2 SV=1
Length = 319
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>sp|Q9DHU2|RIR2_YLDV Ribonucleoside-diphosphate reductase small chain OS=Yaba-like
disease virus GN=20L PE=3 SV=1
Length = 325
Score = 363 bits (932), Expect = e-99, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL ++ +FPI Y+ +W+MYKKA ASFWT EEVDLS+D W +L D+EK+FI H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++QI EAR FYGFQIAMENIHSEMYSLL++TYI DSKE
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K+ LFNAIEN+ CV QKA WA WI S + ++ ERLV FA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFAC+++ L V ++ EAV IE F+ EA+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LM QYI+FVADRLL+ +
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLEL 271
>sp|P33799|RIR2_VAR67 Ribonucleoside-diphosphate reductase small chain OS=Variola virus
(isolate Human/India/Ind3/1967) GN=C8L PE=2 SV=1
Length = 319
Score = 363 bits (932), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 204/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M Y++FVADRL+
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLI 263
>sp|P29883|RIR2_VACCP Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain L-IVP) GN=F14 PE=2 SV=1
Length = 319
Score = 363 bits (931), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 203/262 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W ++ EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGF++A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMN +M YI+FVADRL+
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLI 263
>sp|P09938|RIR2_YEAST Ribonucleoside-diphosphate reductase small chain 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR2 PE=1
SV=2
Length = 399
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 214/271 (78%), Gaps = 2/271 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
+ +ALP AL+GMN+ LM+QY++FVADRLLV
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLV 340
>sp|P32209|RIR2_SWPVK Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus
(strain Kasza) GN=C14L PE=3 SV=1
Length = 274
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/265 (63%), Positives = 206/265 (77%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI+Y +W+MYK++ ASFWT EEVDLS+D+ W++L EK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFA+SDGIV ENLA RF D+Q EAR FYGFQIAMENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNAIE + CV +KA WA WI S+ + ER+V FA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + + ++ +AV IE +F+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVHI 290
LIGMN LMSQYI+FVADRLL +
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTEL 266
>sp|P42170|RIR2_CAEEL Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis
elegans GN=rnr-2 PE=3 SV=1
Length = 381
Score = 355 bits (911), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/284 (60%), Positives = 215/284 (75%), Gaps = 8/284 (2%)
Query: 8 TENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
E+EVN E + EP+L + + RF +FP+++ +W YKKA ASFWT EEVDL +
Sbjct: 51 NESEVN-------ELDADEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGK 103
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ WE++ E++FIS +LAFFAASDGIV ENL RF N++Q+ EAR FYGFQIA+ENI
Sbjct: 104 DMNDWEKMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENI 163
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACV 186
HSEMYS L+ETYI+D E++ LFNA++ + +KA WAL WI SFAERL+ FA V
Sbjct: 164 HSEMYSKLIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAV 223
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EGIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS L+K+L Q+++
Sbjct: 224 EGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYD 283
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
++ +AV IE +F+ EALP +IGMN LMSQYI+FVAD LLV +
Sbjct: 284 IIKDAVAIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLVEL 327
>sp|P50649|RIR2_PLAFG Ribonucleoside-diphosphate reductase small subunit OS=Plasmodium
falciparum (isolate FCR-3 / Gambia) GN=RNR2 PE=3 SV=1
Length = 322
Score = 354 bits (909), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 2/262 (0%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
IL +++ RF ++PI Y V+ YKKA+A FWTAEE+D S D++ +E+L ++EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIVLENLA FL ++QI EA+ FY FQIA+ENIHSE YSLL++ YIKD KE+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA--VEIETQFVCEALPC 265
GLTFSNELISRDEGLH DF CL+YSLL +L Q V ++V EA VE+E F+CE+LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 266 ALIGMNSSLMSQYIKFVADRLL 287
LIGMNS LMSQYI+FVADRLL
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLL 265
>sp|P36603|RIR2_SCHPO Ribonucleoside-diphosphate reductase small chain
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=suc22 PE=3 SV=2
Length = 391
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/273 (61%), Positives = 212/273 (77%), Gaps = 2/273 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
G++E E E +L RF +FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D+ W+ L+
Sbjct: 58 GKKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLN 117
Query: 78 S-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+ E++FIS VLA+FAASDGIV ENL RF +++QIPEAR YGFQI +ENIHSE YSLLL
Sbjct: 118 ADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLL 177
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI++ KEK R F+AI + + KAKWAL WI+ DS +A RLV FA VEGIFFSGSF
Sbjct: 178 DTYIREPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSF 237
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELI RDEGLH DFACL++S L+ R + V ++ EAV+IE
Sbjct: 238 ASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIE 297
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLV 288
++ +ALP +L+GMN LM QYI+FVADRLLV
Sbjct: 298 KEYFTDALPVSLLGMNKDLMCQYIEFVADRLLV 330
>sp|Q8SRR2|RIR2_ENCCU Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0730 PE=3 SV=1
Length = 325
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/271 (60%), Positives = 214/271 (78%), Gaps = 3/271 (1%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E+ E +L + +RF + PI+Y +W+MYKKA++SFWT EEV L +D+ W +L E+HF
Sbjct: 5 EETELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHF 64
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
IS+VLAFFAASDGIV NL RF ++++ EAR FYGFQ+A+ENIHSEMYSLL++TYI+D
Sbjct: 65 ISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRD 124
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWL 201
+ EK+ LF+AI IP V +KA WA+ WI +S FA RLV FACVEGIFFSG+F +IFWL
Sbjct: 125 NDEKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHC+FACLL+ L+K+ + ++ +V +AVEIE +F+ E
Sbjct: 185 KKRGLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSE 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHIHQ 292
+LP LIGMN +LM +YI+FVADRLL ++ +
Sbjct: 243 SLPVNLIGMNCNLMCRYIEFVADRLLENLGE 273
>sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small chain OS=Red sea bream
iridovirus GN=RR-2 PE=3 SV=1
Length = 312
Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 191/269 (71%), Gaps = 5/269 (1%)
Query: 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAA 92
R+ + P +W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 93 SDGIVLENLAARFLNDIQ-IPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFN 151
+DGIV +NL F ++ IPEARAFYGFQ+A+ENIH+EMY+ L+ T + + + LF+
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVA-KENQAALFS 119
Query: 152 AIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGL 210
A E++PCV KA+WA W++++ A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 211 TFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGM 270
FSNELISRDEGLHCDFAC+L+ + + H ++ +AV+IET F EAL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 271 NSSLMSQYIKFVADRLLVHIHQCSLFIIA 299
NS M YI+FVADRLL + ++ ++
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVS 268
>sp|Q7T6Y9|RIR2_MIMIV Ribonucleoside-diphosphate reductase small chain OS=Acanthamoeba
polyphaga mimivirus GN=RNR2 PE=3 SV=2
Length = 417
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 194/269 (72%), Gaps = 3/269 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL +++++ + PI+Y++VW+ YK ++WT EEVDL++DV W L D +++FI
Sbjct: 98 KEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFI 157
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAA+DGIV N+ ++ ++I EA YGFQ AMEN H EMYSL+L T++KD
Sbjct: 158 MHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDD 217
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+++L N+I+ +P + +KA W WI S ++A +LV F+ VEG+FFSGSF +IFWLK
Sbjct: 218 ALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKT 277
Query: 204 RGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
R + MPGL SN+ I+RDE H + AC++YSLL RL V+ ++ EA+EIE +F+ +
Sbjct: 278 REMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFIND 337
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVHI 290
+LPC L+GMNS LMSQYIK+VADRLLV +
Sbjct: 338 SLPCKLLGMNSELMSQYIKYVADRLLVDL 366
>sp|P49723|RIR4_YEAST Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR4 PE=1
SV=1
Length = 345
Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 185/276 (67%), Gaps = 3/276 (1%)
Query: 14 QREQGE-QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
Q+E+ + +E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +
Sbjct: 12 QKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDF 71
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
++L D +K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENI+SE+Y
Sbjct: 72 QKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVY 131
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFF 191
S++++ + KD K LF I N+P V KA + WI + DS +AERLV FA EGIF
Sbjct: 132 SMMVDAFFKDPK-NIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQ 190
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
+G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR + + + + ++ EA
Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEA 250
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLL 287
VEIE ++ +LP GM+ + YI+FVAD LL
Sbjct: 251 VEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLL 286
>sp|P0C8I2|RIR2_ASFWA Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Warthog/Namibia/Wart80/1980)
GN=War-054 PE=3 SV=1
Length = 327
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 176/292 (60%), Gaps = 14/292 (4%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 284
>sp|P26713|RIR2_ASFM2 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/Malawi/Lil 20-1/1983)
GN=Mal-052 PE=3 SV=1
Length = 327
Score = 225 bits (574), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 175/292 (59%), Gaps = 14/292 (4%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A + G + ++ QYI++ D L F++ C K I G FP
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYNVGNPFP 284
>sp|P0C8I1|RIR2_ASFP4 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/South Africa/Pretoriuskop
Pr4/1996) GN=Pret-056 PE=3 SV=1
Length = 327
Score = 224 bits (572), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 178/296 (60%), Gaps = 22/296 (7%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E + RF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + S++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLL-----YSLLRKRLHWQKVHHMVHEAVEIETQFV 259
+MPGL NE ISRDEG+HC FAC L Y++ +R+ +H ++ EAVE+ +F+
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERI----IHKILKEAVELVDEFI 237
Query: 260 CEALPCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 284
>sp|P42492|RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (strain Badajoz 1971 Vero-adapted)
GN=Ba71V-044 PE=3 SV=1
Length = 334
Score = 224 bits (572), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 176/294 (59%), Gaps = 14/294 (4%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 7 NMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFY 66
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D
Sbjct: 67 KQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDE 126
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ R+F+ IE P + + A+W W+ ++ ERLVGFA VEGI F F AI +LK
Sbjct: 127 KEQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLK 186
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCE 261
++ +MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+
Sbjct: 187 EQNIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINY 246
Query: 262 ALPCA---LIGMNSSLMSQYIKFVADRLLVHIHQCSLFIIACVKGIARAGLFFP 312
A A + G + ++ QYI++ D L F++ C K I + G FP
Sbjct: 247 AFDKARGRVPGFSKEMLFQYIRYFTDNL--------CFMMQC-KSIYKVGNPFP 291
>sp|P0C8I0|RIR2_ASFK5 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-056
PE=3 SV=1
Length = 327
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 165/266 (62%), Gaps = 5/266 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRL 286
A + G + ++ QYI++ D L
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNL 267
>sp|Q6R7K3|RIR2_OSHVF Ribonucleoside-diphosphate reductase small chain OS=Ostreid
herpesvirus 1 (isolate France) GN=ORF20 PE=3 SV=1
Length = 579
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLE 99
P Y+Q+ + K ++S W E+D D+ WE++ ++E+ + VLAFFA D +V +
Sbjct: 76 PAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKD 135
Query: 100 NLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCV 159
+A F ++ +PE + F +Q E +H +Y+ L+ +KD L NA ++
Sbjct: 136 RIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFA 194
Query: 160 AQKAKWALDWIHS-----SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 214
K K +DW+ +DS E +VG C E I F+ SF AI + M L N
Sbjct: 195 PIKKK--VDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMRALVLGN 251
Query: 215 ELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSL 274
E I RDE LH F L L+ R +++ ++ EA EIE +F +P + +
Sbjct: 252 EFIRRDETLHFRFYAELLRLMPDRPSDERIAELLTEATEIELEFAEYVVPEGVKYITKDR 311
Query: 275 MSQYIK 280
+ Q++K
Sbjct: 312 LIQHVK 317
>sp|Q4JQV7|RIR2_VZVO Ribonucleoside-diphosphate reductase small chain
OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF18
PE=1 SV=1
Length = 306
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W + + D Q+ + L + E F + F +A+D +V NL + + +
Sbjct: 30 WLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNLGS-LTQLFSQKDIHHY 88
Query: 118 YGFQIAMENIHSEMYSLL-LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q +E +H+ +YS + L + D + + N N P + QK +W + + + S
Sbjct: 89 YIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINNPSIQQKVQWLEEKVRDNPSV 148
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLL 235
AE+ + +EGIFF SF AI +L+ GL N+LISRDE +H +C +Y + +
Sbjct: 149 AEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDEAIHTSASCCIYNNYV 208
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSL 295
++ ++H + EAVEIE F+ P + +N ++QY+KF ADRLL I+ L
Sbjct: 209 PEKPAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQYVKFSADRLLSAINVPKL 267
Query: 296 F 296
F
Sbjct: 268 F 268
>sp|P09247|RIR2_VZVD Ribonucleoside-diphosphate reductase small chain
OS=Varicella-zoster virus (strain Dumas) GN=ORF18 PE=3
SV=1
Length = 306
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W + + D Q+ + L + E F + F +A+D +V NL + + +
Sbjct: 30 WLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNLGS-LTQLFSQKDIHHY 88
Query: 118 YGFQIAMENIHSEMYSLL-LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q +E +H+ +YS + L + D + + N N P + QK +W + + + S
Sbjct: 89 YIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINNPSIQQKVQWLEEKVRDNPSV 148
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLL 235
AE+ + +EGIFF SF AI +L+ GL N+LISRDE +H +C +Y + +
Sbjct: 149 AEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDEAIHTSASCCIYNNYV 208
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIHQCSL 295
++ ++H + EAVEIE F+ P + +N ++QY+KF ADRLL I+ L
Sbjct: 209 PEKPAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQYVKFSADRLLSAINVPKL 267
Query: 296 F 296
F
Sbjct: 268 F 268
>sp|O84835|RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=nrdB PE=1 SV=1
Length = 346
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 26/276 (9%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ERLLDSEKHFISHVLAFFAASDG 95
+ PI+YK WE Y A+ W E+ + +D++ W +RL + E+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAES 90
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
+V N+ + PEAR + Q E +H+ + + E+ D KE +FNA
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147
Query: 156 IPCVAQKAKWAL-------------DWIHSSDSFAERLVGFACV-EGIFFSGSFCAIFWL 201
+ K + + D + F + LVG+ + EGIFF F I
Sbjct: 148 RAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEI 254
++ M G+ + I RDE +H +F L + +++ W Q++ ++ AV++
Sbjct: 208 HRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDL 267
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E ++ + LP ++G+ +S+ Y++ +ADR L I
Sbjct: 268 EIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERI 303
>sp|Q9PL92|RIR2_CHLMU Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=nrdB PE=3 SV=1
Length = 346
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 26/276 (9%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER--LLDSEKHFISHVLAFFAASDG 95
+ PI+YK WE Y A+ W E+ + +D++ W+ L + E+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAES 90
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
+V N+ + PEAR + Q E +H+ + + E+ D KE +FNA
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147
Query: 156 IPCVAQKAKWAL-------------DWIHSSDSFAERLVGFACV-EGIFFSGSFCAIFWL 201
+ K + + D + F + LVG+ + EGIFF F I
Sbjct: 148 RASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEI 254
++ M G+ + I RDE +H +F L + +++ W Q++ M+ AV++
Sbjct: 208 HRQNKMVGIGEQYQYILRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDL 267
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E + + LP ++G+ +S+ Y++ +ADR L I
Sbjct: 268 EIDYARDCLPRGILGLRASMFIDYVQHIADRRLERI 303
>sp|Q9Z6S4|RIR2_CHLPN Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
pneumoniae GN=nrdB PE=3 SV=1
Length = 346
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 26/276 (9%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ERLLDSEKHFISHVLAFFAASDG 95
+ PI+YK WE Y A+ W EV +++D++ W + L + E+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
+V N+ I PEAR + Q E +H+ + + E+ D E +FNA
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147
Query: 156 IPCVAQKAKWALDW----------IHSSDS---FAERLVGFACV-EGIFFSGSFCAIFWL 201
+ K + + + SS+ F + LVG+ + EGIFF F I
Sbjct: 148 RASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEI 254
++ M G+ + I RDE +H +F L + +++ W +++ ++ +AVE+
Sbjct: 208 HRQNKMTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVEL 267
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHI 290
E ++ + LP ++G+ SS+ Y++ +ADR L I
Sbjct: 268 EIEYAKDCLPRGILGLRSSMFIDYVRHIADRRLERI 303
>sp|P0C701|RIR2_EBVG Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain GD1) GN=BaRF1 PE=1 SV=1
Length = 302
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 10/245 (4%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W A + L++D + L + + F + F A ++ +V N+ + + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHY 83
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF-NAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q AMEN+H E Y+ +L + + AI + K W D + ++ +
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 235
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 236 ----RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIH 291
R R W + + AVE+ET F+ EA + ++ + Q+++ ADR+L I
Sbjct: 204 AKADRPRATW--IQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIG 260
Query: 292 QCSLF 296
Q L+
Sbjct: 261 QAPLY 265
>sp|P0CAP6|RIR2_EBVB9 Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain B95-8) GN=BaRF1 PE=1 SV=1
Length = 302
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 10/245 (4%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W A + L++D + L + + F + F A ++ +V N+ + + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHY 83
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF-NAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q AMEN+H E Y+ +L + + AI + K W D + ++ +
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 235
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 236 ----RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIH 291
R R W + + AVE+ET F+ EA + ++ + Q+++ ADR+L I
Sbjct: 204 AKADRPRATW--IQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIG 260
Query: 292 QCSLF 296
Q L+
Sbjct: 261 QAPLY 265
>sp|P0CAP7|RIR2_EBVA8 Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain AG876) GN=BaRF1 PE=3 SV=1
Length = 302
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 10/245 (4%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W A + L++D + L + + F + F A ++ +V N+ + + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHY 83
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF-NAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q AMEN+H E Y+ +L + + AI + K W D + ++ +
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 235
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 236 ----RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVHIH 291
R R W + + AVE+ET F+ EA + ++ + Q+++ ADR+L I
Sbjct: 204 AKADRPRATW--IQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIG 260
Query: 292 QCSLF 296
Q L+
Sbjct: 261 QAPLY 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,438,490
Number of Sequences: 539616
Number of extensions: 4799432
Number of successful extensions: 18328
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 18069
Number of HSP's gapped (non-prelim): 150
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)